Citrus Sinensis ID: 007823

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------59
Protein Sequence
MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQASIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVPSKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHcccccHHHHHHHHHHcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccEEccccccHHHHHHHccccHHHHHHHHHHcccHHHHccccccccccccccccccc
Coil and Loop (DISEMBL)
MGVQLETHQKQLEELQDkydcqvrqcsdlttkleltESNLDQTIKLLNNTEEQLKKCQYALKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIgredklnadnrsVVENFQVELAQQIGSlcdivdlstcqqnEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRenavssklfldghassvegiTTDAKRKWQAFAMQAdndakdgadhssakhCRMELLLQECVnsgesafghWKRTYESVNEMESKHVSSMISLtrnasysneqhdvevdtaRVATEEEVAKSSEDALQLIASASEQEQASIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMdyehtgttptrcesevpskgtieslrAMPMETLLEEFrennsyesfdvkelkpsliprsplsqin
Flexible Loop (DISEMBL)
MGVQLETHQKQLEElqdkydcqVRQCSDLTtkleltesnLDQTIKLLNNTEEQLKKCQYALKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSsklfldghassveGITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQASIAEVLDDVKAHEKTINLFreshsaqsasIKEKAQETFQQRYMDYEHtgttptrcesevpskgtieslRAMPMETLLEEFRENNSyesfdvkelkpsliprsplsqin
Low Complexity Region (SEG)
MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQklleesksleNYAVQADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLiasaseqeqasiaeVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVPSKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN
Disordered region (IsUnstruct)
******************YDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHMEAVQNVVRLHKACSNANLEEI************************IYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLE***************************************ADVTSLV*******TELVEARLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAF*******************CRMELLLQECVNSGESAFGHWKRTY***************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
***Q********************************************************LK**DFII************QACTLRGNLEK***D*************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************TFQQRYMDYEHTGTTPTRCESEVPSKGTIESLRAMPM****************************SPL****
Disordered Region (DISEMBL)
********QKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAFAMQAD***********AKHCRMELLLQECVNSGESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVAT********EDALQLIASASEQEQASIAEVLDDVKAHEKTINLFRES************QETFQQRYMDYEH**************KGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN
Disordered Region (DISPRO)
**VQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQASIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVPSKGTIESLRAMPMETLLEEFRENN************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGVQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLKKCQYALKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFxxxxxxxxxxxxxxxxxxxxxQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQASIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVPSKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	588	2.2.26 [Sep-21-2011]
O23826	1006	125 kDa kinesin-related p	N/A	no	1.0	0.584	0.619	0.0
P82266	1009	Probable 125 kDa kinesin-	yes	no	1.0	0.582	0.607	0.0

>sp|O23826|K125_TOBAC 125 kDa kinesin-related protein OS=Nicotiana tabacum GN=TKRP125 PE=1 SV=1

 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/588 (61%), Positives = 453/588 (77%)

Query: 1    MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
            MGV +E HQKQ EELQ ++D QV+QCSDLT KL++T+  L+QT KLL  TEEQL++ QY 
Sbjct: 418  MGVSIENHQKQFEELQSRHDSQVQQCSDLTCKLDVTQKQLNQTSKLLAYTEEQLRQSQYT 477

Query: 61   LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENF 120
            LKE+DFIISEQKKAENAL HQAC LR +LEK++Q+N  LFQKI REDKL+ DNRS+V NF
Sbjct: 478  LKERDFIISEQKKAENALAHQACVLRADLEKSIQENASLFQKIAREDKLSTDNRSLVNNF 537

Query: 121  QVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCS 180
            Q ELA+Q+GSL   +  S C+Q EHL+ VEK CH+ L  H+KAV+DLK+K+ +S ALY S
Sbjct: 538  QAELAKQLGSLSSTLATSVCRQTEHLQCVEKFCHNFLDSHDKAVLDLKRKINSSMALYIS 597

Query: 181  HMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQ 240
            H EA+QNVVRLHKA SNA LEE+S  ASSNS S KEFL +EA EA S+++ LQ+TLST Q
Sbjct: 598  HFEAMQNVVRLHKATSNATLEEVSTLASSNSISTKEFLDAEAVEANSMFDELQSTLSTHQ 657

Query: 241  GEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADF 300
            GEMA FARE+RQRF  + E   +I+     F  KLL+ESK LE +A   DE Q  SIA+F
Sbjct: 658  GEMAHFARELRQRFNDSTEHLTNISAIIQRFFDKLLDESKRLEKHATTVDEIQTNSIAEF 717

Query: 301  QKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVE 360
            +KAYE+Q+KSD EKLIADVTSLVS+HMRRQ ELV ARLVD RE    ++ FLDGH SS+E
Sbjct: 718  EKAYEEQSKSDAEKLIADVTSLVSNHMRRQKELVGARLVDLRETVSGNRTFLDGHVSSME 777

Query: 361  GITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESV 420
            GITTDAKRKWQ F MQA+ + K+ AD S+AKHCRME L+Q+CV++ E+A   W+ T+E V
Sbjct: 778  GITTDAKRKWQDFYMQAEGETKENADFSAAKHCRMESLMQKCVSTAETALKRWQSTHELV 837

Query: 421  NEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQA 480
            N+M ++HV +M S+ RN   +NEQH  + D+ R + EE+V ++SED ++ I S S +E+ 
Sbjct: 838  NDMGNQHVLTMHSVVRNICDNNEQHVTDFDSTRESAEEDVKRNSEDIIKSIDSLSGEERG 897

Query: 481  SIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVP 540
            SI+ VLD   AH +T+++ ++ H  QS SI++ A ETFQQ+YMDYE TG TP R E +VP
Sbjct: 898  SISGVLDTTSAHSETLDVLKKDHCMQSTSIEQIALETFQQKYMDYEPTGATPIRSEPDVP 957

Query: 541  SKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 588
            SK TIESLRAMPME LLEEFRENNS+ESF VKE+KPSLIPRSP SQIN
Sbjct: 958  SKVTIESLRAMPMEVLLEEFRENNSFESFQVKEVKPSLIPRSPFSQIN 1005

Responsible for microtubule translocation. May be important for the organization of phragmoplast-specific arrays of microtubules.
Nicotiana tabacum (taxid: 4097)

>sp|P82266|K125_ARATH Probable 125 kDa kinesin-related protein OS=Arabidopsis thaliana GN=At2g36200 PE=2 SV=2

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/588 (60%), Positives = 465/588 (79%)

Query: 1    MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
            MG Q+E +QKQLEELQDKY  QVR+CSDLTTKL++TE NL QT K+L +T E+LKK QYA
Sbjct: 422  MGGQIENYQKQLEELQDKYVGQVRECSDLTTKLDITEKNLSQTCKVLASTNEELKKSQYA 481

Query: 61   LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENF 120
            +KEKDFIISEQKK+EN L  QAC L+ NLEKA +DN  L QKIGREDKL+ADNR VV+N+
Sbjct: 482  MKEKDFIISEQKKSENVLVQQACILQSNLEKATKDNSSLHQKIGREDKLSADNRKVVDNY 541

Query: 121  QVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCS 180
            QVEL++QI +L + V     QQN HL+ V KL  S L  H KA++++KKKV ASR LY S
Sbjct: 542  QVELSEQISNLFNRVASCLSQQNVHLQGVNKLSQSRLEAHNKAILEMKKKVKASRDLYSS 601

Query: 181  HMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQ 240
            H+EAVQNVVRLHKA +NA LEE+SA  +S++ SI EFLAS     +S+++ LQ+ LS+ Q
Sbjct: 602  HLEAVQNVVRLHKANANACLEEVSALTTSSACSIDEFLASGDETTSSLFDELQSALSSHQ 661

Query: 241  GEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADF 300
            GEMA+FARE+RQRF  T+E+T++++EYT+ F QKL+EESK+ E  A +A+++Q+ SI DF
Sbjct: 662  GEMALFARELRQRFHTTMEQTQEMSEYTSTFFQKLMEESKNAETRAAEANDSQINSIIDF 721

Query: 301  QKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVE 360
            QK YE Q+KSDT+KLIAD+T+LVSSH+RRQ ELV++RL +F++   S+K FLD H S+V 
Sbjct: 722  QKTYEAQSKSDTDKLIADLTNLVSSHIRRQHELVDSRLHNFKDAVSSNKTFLDEHVSAVN 781

Query: 361  GITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESV 420
             +T DAKRKW+ F+MQA+N+A++GAD S+AKHCRMELLLQ+ V   ESAF H K T+ES+
Sbjct: 782  NLTKDAKRKWETFSMQAENEAREGADFSAAKHCRMELLLQQSVGHAESAFKHCKITHESL 841

Query: 421  NEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQA 480
             EM SK V+ + SL R+A  SNEQHD EVD+AR A E++V K+S+D +Q I   SE E+A
Sbjct: 842  KEMTSKQVTDVSSLVRSACDSNEQHDAEVDSARTAAEKDVTKNSDDIIQQIERMSEDEKA 901

Query: 481  SIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVP 540
            S++++L++V++HEKT+  F++    Q+  I++KAQETFQQ+YM+YE TG TPT+ E E+P
Sbjct: 902  SVSKILENVRSHEKTLESFQQDQCCQARCIEDKAQETFQQQYMEYEPTGATPTKNEPEIP 961

Query: 541  SKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 588
            +K TIESLRAMP+ETL+EEFRENNSYESF  KE KP  + RSPLSQ+N
Sbjct: 962  TKATIESLRAMPIETLVEEFRENNSYESFATKETKPQQLTRSPLSQVN 1009

Responsible for microtubule translocation. May be important for the organization of phragmoplast-specific arrays of microtubules.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	588
255578965	1530	Bipolar kinesin KRP-130, putative [Ricin	1.0	0.384	0.693	0.0
225440841	1009	PREDICTED: 125 kDa kinesin-related prote	1.0	0.582	0.668	0.0
297740135	1006	unnamed protein product [Vitis vinifera]	1.0	0.584	0.668	0.0
356572582	1006	PREDICTED: 125 kDa kinesin-related prote	1.0	0.584	0.644	0.0
356505390	1006	PREDICTED: 125 kDa kinesin-related prote	1.0	0.584	0.634	0.0
224091967	996	predicted protein [Populus trichocarpa]	0.974	0.575	0.634	0.0
357511135	1007	125 kDa kinesin-related protein [Medicag	1.0	0.583	0.611	0.0
440583674	1075	similar to 125 kDa kinesin-related prote	1.0	0.546	0.607	0.0
449462950	1009	PREDICTED: 125 kDa kinesin-related prote	1.0	0.582	0.622	0.0
11132775	1006	RecName: Full=125 kDa kinesin-related pr	1.0	0.584	0.619	0.0

>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis] gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]

 Score =  833 bits (2153), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/588 (69%), Positives = 499/588 (84%)

Query: 1    MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
            MGV +E HQKQ+EELQ +YD QV+QCSDL+ KL+ TE +L QT KLL NTE++LKKC+Y 
Sbjct: 423  MGVTIENHQKQMEELQVRYDAQVQQCSDLSRKLDATEKDLSQTCKLLTNTEDELKKCRYT 482

Query: 61   LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENF 120
            LKEKDFIISEQ+KAENAL HQAC LR +LEKALQDN  LFQKIGREDKLNADNR+VV NF
Sbjct: 483  LKEKDFIISEQRKAENALAHQACVLRSDLEKALQDNASLFQKIGREDKLNADNRAVVSNF 542

Query: 121  QVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCS 180
            QVEL+QQI  L  +V  S  +Q+EH++ VEKLCHS L IH+KAV D+KKK+TASRALY S
Sbjct: 543  QVELSQQISCLQGMVASSMVKQDEHIQCVEKLCHSFLDIHDKAVKDMKKKLTASRALYIS 602

Query: 181  HMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQ 240
            H+EAVQNVVRLHKA S A LEEIS+  SSN++SI+++LASEA +AASI+++LQ+TLST Q
Sbjct: 603  HVEAVQNVVRLHKASSIAGLEEISSSVSSNAQSIEDYLASEAGQAASIFDDLQSTLSTHQ 662

Query: 241  GEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADF 300
            GEMA+FARE+RQ+F V+ ERTK+I++Y NGFLQKLLE+SK L+N+A  ADE Q+KSIADF
Sbjct: 663  GEMALFARELRQKFHVSGERTKEISDYMNGFLQKLLEQSKWLQNHAAHADETQLKSIADF 722

Query: 301  QKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVE 360
            QKAYE+Q+KSD EKL+AD+++LVSSH+RRQ ELV+ARLVD RE A+ ++  LDGH  S+E
Sbjct: 723  QKAYEEQSKSDAEKLVADISNLVSSHIRRQKELVDARLVDLRETAIGNRGILDGHVYSME 782

Query: 361  GITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESV 420
             +TTDAKRKWQ F+MQA+NDAKD AD+S+ KHCRMELLLQ+ +++ ESAF HWK T+ESV
Sbjct: 783  VVTTDAKRKWQEFSMQAENDAKDAADYSAVKHCRMELLLQQSLSTTESAFKHWKMTHESV 842

Query: 421  NEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQA 480
            NEM  KHVSS+ SLTRNA  S EQHDVE+D+ARVATE++VA++SED +Q I + SEQE+ 
Sbjct: 843  NEMGHKHVSSLSSLTRNACDSIEQHDVEIDSARVATEQDVARNSEDFIQHIDNMSEQERG 902

Query: 481  SIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVP 540
            S++ +L+ VKAH  T+  FRE HS Q+ +I++KA +TF Q YMDYE TG+TPTRCE +VP
Sbjct: 903  SVSGILEAVKAHVDTLTSFREDHSGQAVAIEDKAHKTFVQHYMDYEPTGSTPTRCEPDVP 962

Query: 541  SKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 588
            SKGTIESLRAMPME LLEEFRENNSYES +VKELKPSLIPRSPL Q+N
Sbjct: 963  SKGTIESLRAMPMEALLEEFRENNSYESSEVKELKPSLIPRSPLVQLN 1010

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440841|ref|XP_002276356.1| PREDICTED: 125 kDa kinesin-related protein-like [Vitis vinifera]

 Score =  809 bits (2090), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/588 (66%), Positives = 485/588 (82%)

Query: 1    MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
            MGV LE HQKQ EELQ+KYD QVRQCSDL++KL+ T+ NL+ T +LL +TEE+LK+ QYA
Sbjct: 422  MGVLLENHQKQFEELQEKYDSQVRQCSDLSSKLDATQKNLNHTSRLLASTEEELKRVQYA 481

Query: 61   LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENF 120
            LKE+DFIISEQ+KAENALTHQAC LR +LEK+LQDN  LF KIG EDKLNA NRSVV +F
Sbjct: 482  LKERDFIISEQRKAENALTHQACVLRSDLEKSLQDNASLFYKIGAEDKLNASNRSVVNSF 541

Query: 121  QVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCS 180
            Q ELAQQI SLC+ V  S  QQNEHL+ +E LCHS L  H+KAV+DLKKKV AS+ALY S
Sbjct: 542  QAELAQQISSLCNTVATSMSQQNEHLQCIETLCHSFLDTHQKAVLDLKKKVMASKALYIS 601

Query: 181  HMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQ 240
            H+EAVQNVVRLHK+ SNA+LEEIS+  SSN +SI+EFL  EA EA SI++ LQ TLSTQQ
Sbjct: 602  HIEAVQNVVRLHKSSSNASLEEISSLTSSNVQSIEEFLDGEAVEANSIFDELQGTLSTQQ 661

Query: 241  GEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADF 300
            GE+A+FAR++RQRF V++E+T+ I+E+T+GFL  LLEES+ LEN+A  A+E QMKSIA+F
Sbjct: 662  GELALFARDLRQRFHVSMEKTRGISEFTHGFLHNLLEESRKLENHATIAEETQMKSIAEF 721

Query: 301  QKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVE 360
            QKAYE+Q+KSD EKLIAD+T+LVS H+RRQ ELV+ARLVD RE A+ +K+ LDGH SS+E
Sbjct: 722  QKAYEEQSKSDAEKLIADMTNLVSKHIRRQKELVDARLVDLRETAIGNKVSLDGHVSSME 781

Query: 361  GITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESV 420
            GITT+AKRKW+ F+M+A+NDAKD A  ++AKHCRMELLLQ+CV++ E+A  HWKRT++SV
Sbjct: 782  GITTEAKRKWEEFSMEAENDAKDSAVFAAAKHCRMELLLQQCVSTAETASKHWKRTHDSV 841

Query: 421  NEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQA 480
            NEM   HVS+M+SL +NAS SN+QHD EV +AR A EE+V KSSE+ L  +   S+QE+ 
Sbjct: 842  NEMGGTHVSAMLSLVKNASDSNQQHDSEVCSARDAVEEDVGKSSENMLHHLDGVSDQERG 901

Query: 481  SIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVP 540
             I+EVL  VKAH  T+ +  E HS Q+ASI++KA  TFQQRYMDYE TG TPTR E E+P
Sbjct: 902  CISEVLGTVKAHADTLKILDEDHSGQAASIEQKALNTFQQRYMDYEPTGNTPTRSEPEIP 961

Query: 541  SKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 588
            SKG+IESLRAMPME LL+EFREN+SY+SF+VKE +   +PRSPL+QIN
Sbjct: 962  SKGSIESLRAMPMEALLDEFRENHSYDSFEVKETRLPHLPRSPLTQIN 1009

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740135|emb|CBI30317.3| unnamed protein product [Vitis vinifera]

 Score =  809 bits (2089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/588 (66%), Positives = 485/588 (82%)

Query: 1    MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
            MGV LE HQKQ EELQ+KYD QVRQCSDL++KL+ T+ NL+ T +LL +TEE+LK+ QYA
Sbjct: 419  MGVLLENHQKQFEELQEKYDSQVRQCSDLSSKLDATQKNLNHTSRLLASTEEELKRVQYA 478

Query: 61   LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENF 120
            LKE+DFIISEQ+KAENALTHQAC LR +LEK+LQDN  LF KI REDKLNA NRSVV +F
Sbjct: 479  LKERDFIISEQRKAENALTHQACVLRSDLEKSLQDNASLFYKIDREDKLNASNRSVVNSF 538

Query: 121  QVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCS 180
            Q ELAQQI SLC+ V  S  QQNEHL+ +E LCHS L  H+KAV+DLKKKV AS+ALY S
Sbjct: 539  QAELAQQISSLCNTVATSMSQQNEHLQCIETLCHSFLDTHQKAVLDLKKKVMASKALYIS 598

Query: 181  HMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQ 240
            H+EAVQNVVRLHK+ SNA+LEEIS+  SSN +SI+EFL  EA EA SI++ LQ TLSTQQ
Sbjct: 599  HIEAVQNVVRLHKSSSNASLEEISSLTSSNVQSIEEFLDGEAVEANSIFDELQGTLSTQQ 658

Query: 241  GEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADF 300
            GE+A+FAR++RQRF V++E+T+ I+E+T+GFL  LLEES+ LEN+A  A+E QMKSIA+F
Sbjct: 659  GELALFARDLRQRFHVSMEKTRGISEFTHGFLHNLLEESRKLENHATIAEETQMKSIAEF 718

Query: 301  QKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVE 360
            QKAYE+Q+KSD EKLIAD+T+LVS H+RRQ ELV+ARLVD RE A+ +K+ LDGH SS+E
Sbjct: 719  QKAYEEQSKSDAEKLIADMTNLVSKHIRRQKELVDARLVDLRETAIGNKVSLDGHVSSME 778

Query: 361  GITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESV 420
            GITT+AKRKW+ F+M+A+NDAKD A  ++AKHCRMELLLQ+CV++ E+A  HWKRT++SV
Sbjct: 779  GITTEAKRKWEEFSMEAENDAKDSAVFAAAKHCRMELLLQQCVSTAETASKHWKRTHDSV 838

Query: 421  NEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQA 480
            NEM   HVS+M+SL +NAS SN+QHD EV +AR A EE+V KSSE+ L  +   S+QE+ 
Sbjct: 839  NEMGGTHVSAMLSLVKNASDSNQQHDSEVCSARDAVEEDVGKSSENMLHHLDGVSDQERG 898

Query: 481  SIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVP 540
             I+EVL  VKAH  T+ +  E HS Q+ASI++KA  TFQQRYMDYE TG TPTR E E+P
Sbjct: 899  CISEVLGTVKAHADTLKILDEDHSGQAASIEQKALNTFQQRYMDYEPTGNTPTRSEPEIP 958

Query: 541  SKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 588
            SKG+IESLRAMPME LL+EFREN+SY+SF+VKE +   +PRSPL+QIN
Sbjct: 959  SKGSIESLRAMPMEALLDEFRENHSYDSFEVKETRLPHLPRSPLTQIN 1006

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572582|ref|XP_003554447.1| PREDICTED: 125 kDa kinesin-related protein-like [Glycine max]

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/588 (64%), Positives = 479/588 (81%)

Query: 1    MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
            MGV +ET QKQLE+LQ+KY  Q+RQCSDL+ KL+ TE NL++T KLL NTEE+LKKCQY 
Sbjct: 419  MGVTIETQQKQLEDLQNKYVDQIRQCSDLSNKLDSTEKNLNKTSKLLANTEEELKKCQYT 478

Query: 61   LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENF 120
            LKEKDFII+ Q+KAENAL HQAC LR +LEKA QDN  LF KIGREDKLN+DN++VV NF
Sbjct: 479  LKEKDFIIAGQRKAENALAHQACVLRADLEKAHQDNASLFLKIGREDKLNSDNKAVVNNF 538

Query: 121  QVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCS 180
            Q ELAQQ+GSLC+ V  S  +QNEHL+ V+KLCHS L +H+KAV+DLK+KVT+ RALY S
Sbjct: 539  QAELAQQVGSLCNTVATSLSEQNEHLEGVKKLCHSFLDVHDKAVVDLKRKVTSLRALYIS 598

Query: 181  HMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQ 240
            H EAV+NVVRLHKA S+ANLEE+S+  SSN  SI+EFLASEA EA SI++NLQ+TLSTQQ
Sbjct: 599  HFEAVENVVRLHKAGSDANLEELSSVISSNGHSIEEFLASEATEAGSIFDNLQSTLSTQQ 658

Query: 241  GEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADF 300
            GE+A+FARE+R RF +++E+ KDI++ +  F+ KL EESK LE+YA QAD+ Q+KSI +F
Sbjct: 659  GELALFARELRNRFNLSLEQIKDISDRSQEFVDKLFEESKKLEDYASQADQMQLKSIDEF 718

Query: 301  QKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVE 360
            +KAYE+Q+KSDTEKLIA++TSLVS H+RRQ +LV+A+LVD RE+ + +K FLDGH SSV 
Sbjct: 719  KKAYEEQSKSDTEKLIANMTSLVSDHIRRQMDLVDAKLVDLRESGIKNKSFLDGHVSSVG 778

Query: 361  GITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESV 420
             I T+ KRKWQAF   A+ DAKD AD+S+AKHCRME+L+Q+ VN+ +SAF H KRT+E++
Sbjct: 779  DIVTNGKRKWQAFCEHAEKDAKDTADYSAAKHCRMEVLMQQSVNTAQSAFEHTKRTHEAI 838

Query: 421  NEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQA 480
             EM +KH+S+   + RNA+ +N QH VEVD+ARVA EE+VAK+SED L+ +   S QE+ 
Sbjct: 839  IEMGTKHISATEPIVRNATDNNVQHVVEVDSARVAAEEDVAKNSEDLLEQLDVTSAQERE 898

Query: 481  SIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVP 540
            SI+ VL+ V+ H  T+   RE H+ Q+ SI+    ETFQ++Y DYE +GTTP RCE +VP
Sbjct: 899  SISGVLNVVRTHANTLETLREDHAGQATSIEHTTSETFQRQYRDYEPSGTTPIRCEPDVP 958

Query: 541  SKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 588
            +KGTIESLR++PME LLEEFRENN YES DVKELKPSLIPRSPL+Q+N
Sbjct: 959  TKGTIESLRSLPMEALLEEFRENNPYESNDVKELKPSLIPRSPLTQLN 1006

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505390|ref|XP_003521474.1| PREDICTED: 125 kDa kinesin-related protein-like [Glycine max]

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/588 (63%), Positives = 473/588 (80%)

Query: 1    MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
            MGV +ET QKQLE+LQ+KY  Q+RQCSDL+ KL+ T+ NL++T KLL NTEE+LKKC Y 
Sbjct: 419  MGVTIETQQKQLEDLQNKYVDQIRQCSDLSNKLDSTQKNLNKTSKLLANTEEELKKCHYT 478

Query: 61   LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENF 120
            LKEKDFIISEQ+KAENAL HQAC LR +LEKA QDN  LF KIGREDKLN+DNR+VV NF
Sbjct: 479  LKEKDFIISEQRKAENALAHQACVLRADLEKAHQDNASLFLKIGREDKLNSDNRAVVNNF 538

Query: 121  QVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCS 180
            Q ELAQQ+GSLC+ V  S  +QNEHL+ V+KLCHS L +H+KA +DLK+KVT+ R LY S
Sbjct: 539  QAELAQQVGSLCNTVATSLSEQNEHLEGVKKLCHSFLDLHDKAAVDLKRKVTSLRTLYIS 598

Query: 181  HMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQ 240
            H EAV+NVVRLHKA S+ANLEE+S+  SSN  SI+EFLASEA EA SI+++LQ TLSTQQ
Sbjct: 599  HFEAVENVVRLHKAGSDANLEELSSVISSNGHSIEEFLASEATEAGSIFDDLQRTLSTQQ 658

Query: 241  GEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADF 300
             E+ +FA ++R RF +++E+ KDI++ +  F+ KL EESK LE+YA QAD+ QMKSI +F
Sbjct: 659  DELELFAGKLRSRFNLSLEQIKDISDRSQEFVDKLFEESKKLEDYASQADQMQMKSIDEF 718

Query: 301  QKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVE 360
            +KAYE+Q+KSDTEKLIA++TSLVS H+RRQ +LV+++LVD RE+ + +K FLDGH SS+ 
Sbjct: 719  KKAYEEQSKSDTEKLIANMTSLVSDHIRRQMDLVDSKLVDLRESGIKNKSFLDGHVSSMG 778

Query: 361  GITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESV 420
             I T+AKRKWQAF +QA+ DAKD AD S+AKHCRME L+Q  V++ +SAF H K+T+E+V
Sbjct: 779  DIVTNAKRKWQAFCVQAEKDAKDTADDSAAKHCRMEKLIQRGVHTAQSAFEHTKKTHEAV 838

Query: 421  NEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQA 480
            NEM +KH+S+  S+ RNA+ +N QH VEV +ARV  EE+VAK+SED L+ +   S QE+ 
Sbjct: 839  NEMGTKHISATESIVRNATDNNVQHVVEVHSARVTAEEDVAKNSEDLLEQLDVTSAQERE 898

Query: 481  SIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVP 540
            SI+ VL+ V+ H  T+   RE H+ Q+ SI+    +TFQQ+Y DYE +GTTP RCE +VP
Sbjct: 899  SISGVLNVVRTHANTLETLREDHNGQATSIEHTTSKTFQQQYRDYEASGTTPIRCEPDVP 958

Query: 541  SKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 588
            +KGTIESLR++PME LLEEFRENN YES DVKELKPSLIPRSPL+Q+N
Sbjct: 959  TKGTIESLRSLPMEALLEEFRENNPYESNDVKELKPSLIPRSPLTQLN 1006

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091967|ref|XP_002309420.1| predicted protein [Populus trichocarpa] gi|222855396|gb|EEE92943.1| predicted protein [Populus trichocarpa]

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/588 (63%), Positives = 475/588 (80%), Gaps = 15/588 (2%)

Query: 1   MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
           MGV +ETHQKQ EE +D+YD QV QCSDL++KL   E N +QTIKLL  TEE+LKKC+Y 
Sbjct: 422 MGVMIETHQKQSEEWRDRYDAQVHQCSDLSSKLSTAEKNFNQTIKLLTCTEEELKKCRY- 480

Query: 61  LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENF 120
                         ENAL HQAC LR +LEKALQDN  LFQKIGREDKL++DNRSVV NF
Sbjct: 481 --------------ENALAHQACVLRSDLEKALQDNASLFQKIGREDKLSSDNRSVVNNF 526

Query: 121 QVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCS 180
           + +L+QQI SLC++V +S  QQNEHL+ V++L HS L +H K++ +LKKK++ASRA+Y S
Sbjct: 527 RGQLSQQIVSLCNMVSMSISQQNEHLQRVQELGHSFLDMHYKSIEELKKKLSASRAMYIS 586

Query: 181 HMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQ 240
           H+EAVQNVVRLHKA S A LEEIS+ ASS+++SIK++L SEA  AASI+++LQ +LST Q
Sbjct: 587 HIEAVQNVVRLHKASSIAGLEEISSMASSSTQSIKDYLESEAGPAASIFDDLQNSLSTHQ 646

Query: 241 GEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADF 300
           GE+++FAREMRQRF V+ E+ K+++EY NGFL K+LE+ KSLEN+AVQAD  QMK+I DF
Sbjct: 647 GEVSLFAREMRQRFLVSSEKRKEVSEYMNGFLDKILEQCKSLENHAVQADAIQMKNITDF 706

Query: 301 QKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVE 360
           Q+AYE+Q+K+DTEKL+AD+ +LVS+H++RQ ELV+ARLVD RE A  +K FLDGH SS+E
Sbjct: 707 QEAYEEQSKTDTEKLVADINNLVSNHLQRQKELVDARLVDLRETATGNKAFLDGHVSSME 766

Query: 361 GITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESV 420
            ++TDAKRKW  F+M+A++ AKD AD+SSAKHCRME LLQ+CV++  SAF HW++T++SV
Sbjct: 767 CVSTDAKRKWHEFSMKAEDSAKDVADYSSAKHCRMESLLQQCVSTAGSAFKHWQKTHDSV 826

Query: 421 NEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQA 480
           N+M   HVS ++SLTRNAS S EQHD EVD+ARV  E++VA +SED L+ I   S++E+ 
Sbjct: 827 NKMGISHVSELVSLTRNASESFEQHDAEVDSARVTAEQDVANNSEDILKRIDRVSDKERG 886

Query: 481 SIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVP 540
           S++++LD VKAH   +  FRE HS +SA+I+++A ETF+QRYMDYE TGTTP R E +VP
Sbjct: 887 SVSKILDAVKAHANALETFREDHSGKSAAIEDRAHETFEQRYMDYESTGTTPVRSEPDVP 946

Query: 541 SKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 588
           SKGTIESLRAMPME LLEEFRENNSYES + KELKPSLIPRSPL Q+N
Sbjct: 947 SKGTIESLRAMPMENLLEEFRENNSYESLEEKELKPSLIPRSPLVQLN 994

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511135|ref|XP_003625856.1| 125 kDa kinesin-related protein [Medicago truncatula] gi|87240830|gb|ABD32688.1| Kinesin, motor region [Medicago truncatula] gi|355500871|gb|AES82074.1| 125 kDa kinesin-related protein [Medicago truncatula]

 Score =  748 bits (1930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/589 (61%), Positives = 474/589 (80%), Gaps = 1/589 (0%)

Query: 1    MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
            MG+ +E++QKQLE++++KYD QVRQCS+L+ KL+ TE NL++T K+L N EE+LKKC+Y 
Sbjct: 419  MGITIESYQKQLEDMRNKYDDQVRQCSNLSNKLDTTEKNLNKTSKVLANREEELKKCRYT 478

Query: 61   LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENF 120
            L EK+FIISEQ+KAENAL HQAC LR +LEKALQDN  LF KIGREDKL++DNR+VV NF
Sbjct: 479  LNEKEFIISEQRKAENALAHQACVLRADLEKALQDNASLFAKIGREDKLSSDNRAVVNNF 538

Query: 121  QVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCS 180
            Q ELAQ++GSLC+ V  S  +QN HL+ VEKLCHS LGIH+K  IDLK+K+   RA+Y S
Sbjct: 539  QAELAQKVGSLCNTVTTSLSEQNGHLQGVEKLCHSFLGIHDKVAIDLKEKMKDLRAVYVS 598

Query: 181  HMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQ 240
            H+EAVQNVVRLHKA S+A+LEE+S+  SS+  SI+EFL + A EA SI++ LQ+ LSTQ 
Sbjct: 599  HIEAVQNVVRLHKAGSDASLEELSSAISSHGHSIEEFLTTAATEAGSIFDELQSCLSTQH 658

Query: 241  GEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADF 300
            GE+ +FARE+R RF +++E+ K+I+E +   ++KL EESK LE +  +AD+ Q +SI DF
Sbjct: 659  GELTLFAREVRNRFNLSVEQIKEISERSEELVEKLFEESKKLEEFVARADQMQTESIDDF 718

Query: 301  QKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVE 360
            +KAYE+Q+KS++EKLIAD+TSL+S H+RRQ  LV+++LVD RE+ + +K F DGH SSVE
Sbjct: 719  KKAYEEQSKSESEKLIADMTSLISDHIRRQVHLVDSKLVDLRESGIKNKSFFDGHVSSVE 778

Query: 361  GITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESV 420
             ITT+AKRKWQ+F +QA+ DAKD AD+S+AKHCRME+LLQ+ V++  SAFG  KRT+E+V
Sbjct: 779  DITTNAKRKWQSFCIQAEKDAKDTADYSAAKHCRMEVLLQQSVSTAHSAFGQVKRTHEAV 838

Query: 421  NEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQA 480
            NE+ +KH+ +  SL RNA  S+ QH  EV++ R A EE+VAK+++D LQ   + S +E+ 
Sbjct: 839  NELGAKHIFATESLIRNACESHVQHVAEVNSVRAAAEEDVAKNTDDFLQQFDATSAEERE 898

Query: 481  SIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVP 540
            S+  V++ VK+H  T+ +FRE+HS Q+ASI+ +A ETFQQ YMDYE +GTTP RCE EVP
Sbjct: 899  SVCSVVNVVKSHANTLEMFRENHSGQAASIEHRACETFQQDYMDYEPSGTTPVRCEPEVP 958

Query: 541  SKGTIESLRAMPMETLLEEFRENNSYE-SFDVKELKPSLIPRSPLSQIN 588
            SKGTI+SLR +P+E LLEEFRENNSYE S DVKELKPSLIPRSPL+Q+N
Sbjct: 959  SKGTIDSLRTLPIEALLEEFRENNSYESSSDVKELKPSLIPRSPLTQLN 1007

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|440583674|emb|CCH47180.1| similar to 125 kDa kinesin-related protein-like [Lupinus angustifolius]

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/607 (60%), Positives = 469/607 (77%), Gaps = 19/607 (3%)

Query: 1    MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNL-------DQTIKLLNNTEEQ 53
            MGV +E HQKQ E+LQ KY  QV+QCSDL+ KL+ TE NL       ++T KLL+N EE+
Sbjct: 469  MGVTIEAHQKQFEDLQSKYLDQVQQCSDLSDKLDTTEDNLKTAQKNLNKTCKLLSNKEEE 528

Query: 54   LKKCQYALKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADN 113
            LKK QY LKEKDFIISEQ+KAEN+L HQAC LR +LEKA QDN  LF KIGREDKLN+DN
Sbjct: 529  LKKSQYNLKEKDFIISEQRKAENSLAHQACVLRADLEKAHQDNASLFLKIGREDKLNSDN 588

Query: 114  RSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTA 173
            R++V NFQVELAQQ+GSLC+ V  S  +QN HL+ VEKLC S LGI++  V DLKKKVT 
Sbjct: 589  RTLVNNFQVELAQQVGSLCNTVATSLSEQNAHLQCVEKLCRSFLGINDTMVSDLKKKVTT 648

Query: 174  SRALYCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQ 233
             RALY SH+EAVQNVV LHKA SNA L+E+S+  SSN   I+EFLASEA E+ S++++LQ
Sbjct: 649  LRALYISHIEAVQNVVHLHKASSNATLDELSSVISSNGHYIEEFLASEATESGSLFDDLQ 708

Query: 234  TTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQ 293
             +LSTQQGE+A+FARE+R R  +++E+ KDI+E +  F+ KL EESK LE++A +AD  Q
Sbjct: 709  NSLSTQQGELALFARELRHRLNLSVEKIKDISERSQEFVDKLFEESKKLEDFASEADHKQ 768

Query: 294  MKSIADFQKAYE------------DQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDF 341
            MKSIA+F++AYE            +Q++SDTEKLIAD+T+LVS+H+RRQ +LV+ +LVD 
Sbjct: 769  MKSIAEFKQAYETSDVYSIFYSVQEQSRSDTEKLIADMTTLVSAHIRRQMDLVDTKLVDL 828

Query: 342  RENAVSSKLFLDGHASSVEGITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQE 401
            RE+ V++K FLDGH +S   I T AKRKWQ F MQA+ D  D AD+S+AKHCRME LLQ+
Sbjct: 829  RESGVTNKSFLDGHVASARDIVTHAKRKWQNFCMQAEKDTNDTADYSAAKHCRMEALLQQ 888

Query: 402  CVNSGESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVA 461
             VN+ ESA  H KRT+E+VNEME+KH+S+ +SL RNA  +N QH+ E+D+ARVA EE+VA
Sbjct: 889  SVNTAESALVHSKRTHEAVNEMEAKHISAAVSLVRNACDNNMQHENEIDSARVAAEEDVA 948

Query: 462  KSSEDALQLIASASEQEQASIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQR 521
            K+S++ L+   + S QEQ  I  ++D VK H  T+  FRE H++Q ASI+  A ETFQQ 
Sbjct: 949  KNSDNLLEQFDAMSGQEQECITCMVDVVKTHANTLQTFREDHASQVASIEHTACETFQQH 1008

Query: 522  YMDYEHTGTTPTRCESEVPSKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPR 581
            Y DYE +GTTP RCE +VPS GTIESLR++PME L+EEF+ENNSYES +VK+LKPSLIPR
Sbjct: 1009 YKDYEPSGTTPIRCEPDVPSNGTIESLRSLPMEALVEEFQENNSYESPNVKDLKPSLIPR 1068

Query: 582  SPLSQIN 588
            SPL+++N
Sbjct: 1069 SPLTELN 1075

Source: Lupinus angustifolius

Species: Lupinus angustifolius

Genus: Lupinus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462950|ref|XP_004149198.1| PREDICTED: 125 kDa kinesin-related protein-like [Cucumis sativus] gi|449500894|ref|XP_004161223.1| PREDICTED: 125 kDa kinesin-related protein-like [Cucumis sativus]

 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/588 (62%), Positives = 467/588 (79%)

Query: 1    MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
            MGV +ET+QKQLEELQ+KY+ Q   CSDL+ KL+ TE  L QT KLL++TEE+LKKCQY 
Sbjct: 422  MGVTIETYQKQLEELQEKYNIQSVHCSDLSKKLDSTEKTLCQTQKLLSSTEEELKKCQYF 481

Query: 61   LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENF 120
            LKEKDF+ISEQ+KAENAL HQAC LR +LEKALQDN  LF KIGREDKLN +NR+VV+N+
Sbjct: 482  LKEKDFVISEQRKAENALAHQACVLRSDLEKALQDNASLFMKIGREDKLNTENRAVVDNY 541

Query: 121  QVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCS 180
            Q+EL QQIGS+C+IV  S  QQNEHL+ VE +CHS L  HEKA++D+KKK+++SR LY S
Sbjct: 542  QIELTQQIGSVCNIVSTSLSQQNEHLQCVENICHSFLDKHEKAIMDMKKKLSSSRTLYIS 601

Query: 181  HMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQ 240
            H+EA+QNVVRLHKA SNA LE+IS+ ASS+++SI+EFL +EA EA++I +NLQ+TLSTQ 
Sbjct: 602  HIEALQNVVRLHKASSNATLEDISSLASSSAKSIEEFLTTEAGEASAILDNLQSTLSTQS 661

Query: 241  GEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADF 300
             EMA+FARE+RQRF VTI++TK I+EY   FL KL +ESK L N+A +A+E QMKSIA+F
Sbjct: 662  KEMALFARELRQRFHVTIDQTKGISEYIEEFLSKLTDESKKLGNHAAEAEEIQMKSIAEF 721

Query: 301  QKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVE 360
            QK YE+Q+++DTEKLIAD+T+LVS H+RRQ ELV+ARL+  +E A ++K FLDG+ SS++
Sbjct: 722  QKVYEEQSRTDTEKLIADMTNLVSCHIRRQKELVDARLIGLQETASANKTFLDGYISSMD 781

Query: 361  GITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESV 420
            G+ TDAKRKWQ FA Q D++ +D AD S+AKHCRME LLQ+CV + ESA   W +T ES+
Sbjct: 782  GMATDAKRKWQVFATQTDSETRDSADFSAAKHCRMEDLLQQCVGTTESALKQWNKTRESL 841

Query: 421  NEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQA 480
             EM +KHVS ++S  R A  SNEQHD E  + R A E+++  + ED LQ + S S+QE+ 
Sbjct: 842  TEMGTKHVSDVVSAVRGACDSNEQHDAEFTSERSAAEQDMMTNIEDTLQHVDSISKQERG 901

Query: 481  SIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVP 540
            SI+ +LD VK H +T+  FR  HS Q ++I+EKA+ETF+Q+Y DYE TG+TP RCE +VP
Sbjct: 902  SISGILDAVKTHTETMEAFRTDHSCQVSAIEEKAKETFRQQYGDYEPTGSTPIRCEPDVP 961

Query: 541  SKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 588
            SK TIESLRAMPME L+EEFRENNS E     + KPSLIPR+PL + N
Sbjct: 962  SKSTIESLRAMPMEALVEEFRENNSCELLSNGKEKPSLIPRAPLLERN 1009

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|11132775|sp|O23826.1|K125_TOBAC RecName: Full=125 kDa kinesin-related protein gi|2582971|dbj|BAA23159.1| TKRP125 [Nicotiana tabacum]

 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/588 (61%), Positives = 453/588 (77%)

Query: 1    MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
            MGV +E HQKQ EELQ ++D QV+QCSDLT KL++T+  L+QT KLL  TEEQL++ QY 
Sbjct: 418  MGVSIENHQKQFEELQSRHDSQVQQCSDLTCKLDVTQKQLNQTSKLLAYTEEQLRQSQYT 477

Query: 61   LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENF 120
            LKE+DFIISEQKKAENAL HQAC LR +LEK++Q+N  LFQKI REDKL+ DNRS+V NF
Sbjct: 478  LKERDFIISEQKKAENALAHQACVLRADLEKSIQENASLFQKIAREDKLSTDNRSLVNNF 537

Query: 121  QVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCS 180
            Q ELA+Q+GSL   +  S C+Q EHL+ VEK CH+ L  H+KAV+DLK+K+ +S ALY S
Sbjct: 538  QAELAKQLGSLSSTLATSVCRQTEHLQCVEKFCHNFLDSHDKAVLDLKRKINSSMALYIS 597

Query: 181  HMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQ 240
            H EA+QNVVRLHKA SNA LEE+S  ASSNS S KEFL +EA EA S+++ LQ+TLST Q
Sbjct: 598  HFEAMQNVVRLHKATSNATLEEVSTLASSNSISTKEFLDAEAVEANSMFDELQSTLSTHQ 657

Query: 241  GEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADF 300
            GEMA FARE+RQRF  + E   +I+     F  KLL+ESK LE +A   DE Q  SIA+F
Sbjct: 658  GEMAHFARELRQRFNDSTEHLTNISAIIQRFFDKLLDESKRLEKHATTVDEIQTNSIAEF 717

Query: 301  QKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVE 360
            +KAYE+Q+KSD EKLIADVTSLVS+HMRRQ ELV ARLVD RE    ++ FLDGH SS+E
Sbjct: 718  EKAYEEQSKSDAEKLIADVTSLVSNHMRRQKELVGARLVDLRETVSGNRTFLDGHVSSME 777

Query: 361  GITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESV 420
            GITTDAKRKWQ F MQA+ + K+ AD S+AKHCRME L+Q+CV++ E+A   W+ T+E V
Sbjct: 778  GITTDAKRKWQDFYMQAEGETKENADFSAAKHCRMESLMQKCVSTAETALKRWQSTHELV 837

Query: 421  NEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQA 480
            N+M ++HV +M S+ RN   +NEQH  + D+ R + EE+V ++SED ++ I S S +E+ 
Sbjct: 838  NDMGNQHVLTMHSVVRNICDNNEQHVTDFDSTRESAEEDVKRNSEDIIKSIDSLSGEERG 897

Query: 481  SIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVP 540
            SI+ VLD   AH +T+++ ++ H  QS SI++ A ETFQQ+YMDYE TG TP R E +VP
Sbjct: 898  SISGVLDTTSAHSETLDVLKKDHCMQSTSIEQIALETFQQKYMDYEPTGATPIRSEPDVP 957

Query: 541  SKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 588
            SK TIESLRAMPME LLEEFRENNS+ESF VKE+KPSLIPRSP SQIN
Sbjct: 958  SKVTIESLRAMPMEVLLEEFRENNSFESFQVKEVKPSLIPRSPFSQIN 1005

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	588
TAIR|locus:2077132	1058	AT3G45850 [Arabidopsis thalian	0.947	0.526	0.255	1e-52
TAIR|locus:2049791	1039	AT2G37420 [Arabidopsis thalian	0.988	0.559	0.206	7.3e-37
UNIPROTKB|G4N0Y1	709	MGG_09571 "Uncharacterized pro	0.891	0.739	0.216	1.2e-08
UNIPROTKB|E1BYQ6	2368	TPR "Uncharacterized protein"	0.727	0.180	0.192	4.1e-08
WB|WBGene00011696	1205	eea-1 [Caenorhabditis elegans	0.889	0.434	0.187	1.1e-07
UNIPROTKB|F1NXA1	1067	KIF11 "Uncharacterized protein	0.906	0.499	0.186	8.8e-07
UNIPROTKB|F1S300	2365	TPR "Uncharacterized protein"	0.954	0.237	0.185	1e-06
UNIPROTKB|F6UV28	2127	TPR "Uncharacterized protein"	0.954	0.263	0.180	1.9e-06
UNIPROTKB|E2QSE6	2366	TPR "Uncharacterized protein"	0.954	0.237	0.180	2.2e-06
UNIPROTKB|P82094	1093	TMF1 "TATA element modulatory	0.913	0.491	0.207	2.4e-06

TAIR|locus:2077132 AT3G45850 [Arabidopsis thaliana (taxid:3702)]

 Score = 555 (200.4 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 144/563 (25%), Positives = 276/563 (49%)

Query:     3 VQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALK 62
             +Q E+  K++ +LQ+ Y+ Q    ++L+ KLE TE  L++T   L + EE+ ++    +K
Sbjct:   455 LQSESKDKRVVDLQELYNSQQILTAELSEKLEKTEKKLEETEHSLFDLEEKYRQANATIK 514

Query:    63 EKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENFQV 122
             EK+F+IS   K+E +L  +A  LR  LE A  D   LF KI R+DK+   NR +++ FQ 
Sbjct:   515 EKEFVISNLLKSEKSLVERAFQLRTELESASSDVSNLFSKIERKDKIEDGNRFLIQKFQS 574

Query:   123 ELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHM 182
             +L QQ+  L   V  S  QQ   LKH+E+   S +    +A  +L+ +++  + +Y S +
Sbjct:   575 QLTQQLELLHKTVASSVTQQEVQLKHMEEDMESFVSTKSEATEELRDRLSKLKRVYGSGI 634

Query:   183 EAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQGE 242
             EA+ N+       S +    +++  S +S  ++      A EA  + ++LQ++L+ Q+ +
Sbjct:   635 EALDNIAVKLDGNSQSTFSSLNSEVSKHSHELENVFKGFASEADMLLQDLQSSLNKQEEK 694

Query:   243 MAIFAREMRQRFQVTIERTKDIAEYTNGFLQXXXXXXXXXXNYAVQADENQMKSIADFQK 302
             +  FA++ R+     ++  + +++ T  F +              +A     K +++F+ 
Sbjct:   695 LITFAQQQRKAHSRAVDTARSVSKVTVEFFKTLDTHATKLTGIVEEAQTVNHKKLSEFEN 754

Query:   303 AYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGI 362
              +E+   ++  +L+  V  L+++   R+  LV+  + D RE+A +    L    S+++  
Sbjct:   755 KFEECAANEERQLLEKVAELLANSNARKKNLVQMAVHDLRESASTRTTTLQHEMSTMQDS 814

Query:   363 TTDAKRKWQAFAMQADNDA-KDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESVN 421
             T+  K +W     + ++   +D +   S K    E+LL  C+   E +   W++  ES+ 
Sbjct:   815 TSSIKAEWSIHMEKTESSHHEDTSAVESGKKAMQEVLLN-CLEKTEMSAHQWRKAQESLV 873

Query:   422 EMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLXXXXXXXXXXX 481
              +E  +V+S+ S+ R    +NE    +  TA V++  +V  ++  +L             
Sbjct:   874 SLERNNVASVDSIVRGGMDANENLRSQFSTA-VSSSLDVFDAANSSLLTSIDHSLQLDND 932

Query:   482 XXXVLDD--VKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEV 539
                 ++   +   E  I L +  H+ +   I E A +     Y+  E + +TP +   ++
Sbjct:   933 ACTKVNSMIIPCCEDLIEL-KSDHNHKIIEITENAGKCLLDEYVVDEPSCSTPKKRPIDI 991

Query:   540 PSKGTIESLRAMPMETLLEEFRE 562
             PS  +IE LR    E LL  FR+
Sbjct:   992 PSIESIEELRTPASEELLRAFRD 1014

GO:0003777 "microtubule motor activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

TAIR|locus:2049791 AT2G37420 [Arabidopsis thaliana (taxid:3702)]

 Score = 413 (150.4 bits), Expect = 7.3e-37, P = 7.3e-37
 Identities = 121/587 (20%), Positives = 273/587 (46%)

Query:     4 QLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALKE 63
             +L   + ++ +  D Y+ +  +  D+ + L+  + NL  + K L + +E   +    LKE
Sbjct:   456 ELNLSESEVSKFCDLYETEKEKLLDVESDLKDCKRNLHNSNKDLLDLKENYIQVVSKLKE 515

Query:    64 KDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENFQVE 123
             K+ I+S  K +E +L  +A  LR +L+ A  D   LF ++ ++DKL +DN+S++  F  +
Sbjct:   516 KEVIVSRMKASETSLIDRAKGLRCDLQHASNDINSLFTRLDQKDKLESDNQSMLLKFGSQ 575

Query:   124 LAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHME 183
             L Q +  L   V  S  QQ + L+ +E+  HS L     A  DL+ ++  +   Y S + 
Sbjct:   576 LDQNLKDLHRTVLGSVSQQQQQLRTMEEHTHSFLAHKYDATRDLESRIGKTSDTYTSGIA 635

Query:   184 AVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQGEM 243
             A++ +  + +  ++++LE+ +    S  E++++FL + A EA+++ +++   L+ Q+  +
Sbjct:   636 ALKELSEMLQKKASSDLEKKNTSIVSQIEAVEKFLTTSATEASAVAQDIHNLLNDQKKLL 695

Query:   244 AIFAREMRQRFQVTIERTKDIAEYTNGFLQXXXXXXXXXXNYAVQADENQMKSIAD-FQK 302
             A+ AR+  Q    ++   ++I+  T+                A++A + +     D F+ 
Sbjct:   696 ALAARQQEQGLVRSMRSAQEISNSTSTIFSNIYNQAHDVVE-AIRASQAEKSRQLDAFEM 754

Query:   303 AYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGI 362
              ++++ + + ++ + D++ ++S    ++T ++     + RE+ +  +  L    S ++ +
Sbjct:   755 KFKEEAEREEKQALNDISLILSKLTSKKTAMISDASSNIREHDIQEEKRLYEQMSGMQQV 814

Query:   363 TTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESVNE 422
             +  AK +   +  +      +    S+     M+  L++C+     +   W+ T   +  
Sbjct:   815 SIGAKEELCDYLKKEKTHFTENTIASAESITVMDSYLEDCLGRANDSKTLWETTETGIKN 874

Query:   423 MESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLXXXXXXXXXXXX 482
             + +K+   +     + +  NE+   E  T+  ++ +    S  + L              
Sbjct:   875 LNTKYQQELNVTMEDMAKENEKVQDEF-TSTFSSMDANFVSRTNELHAAVNDSLMQDREN 933

Query:   483 XXVLDD-VKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVPS 541
                 +  V+     + L +E+H    ++I+ KA+++  + Y   +H   TP +    VPS
Sbjct:   934 KETTEAIVETCMNQVTLLQENHGQAVSNIRNKAEQSLIKDYQVDQHKNETPKKQSINVPS 993

Query:   542 KGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 588
               +IE +R +  +  L E  E+ S E    K+       R+P  ++N
Sbjct:   994 LDSIEEMRTLFSQNTLSE--EHTSLEKISTKQGLGEANNRTPFLEVN 1038

GO:0003777 "microtubule motor activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0007018 "microtubule-based movement" evidence=IEA

UNIPROTKB|G4N0Y1 MGG_09571 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 165 (63.1 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 125/578 (21%), Positives = 241/578 (41%)

Query:     4 QLETHQKQLEELQDKYDCQV-RQCSDLTTKLELTESNLDQTIKLLNNT----EEQLKKCQ 58
             +L+T  K+L+E  D    Q+  + SD+ T ++  +  L    K L       E +LKK  
Sbjct:    18 ELQTKVKELQEKLDATKTQLDTRDSDIKTLVQRADE-LAAAKKPLEEEKTELEAKLKKAS 76

Query:    59 YALKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGRE--DKLNADNRSV 116
               L  +D  I +  K  + +  +  +L+   EKA  D  L   + G+E   K   +    
Sbjct:    77 EDLSTRDSEIKDLLKNIDQVNAKVESLKK--EKAAVDQQLAEAQKGKEGAQKETLEKIDA 134

Query:   117 VENFQVELAQQIGSL-CDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASR 175
             +E  + EL  Q+  L  ++ D+S+  +N+ L+  +     LL     A   LK ++ A  
Sbjct:   135 LEKAKAELNAQVEKLKSEVADVSS--KNDSLRQEQS---KLLEETNSAKDTLKAELDAKI 189

Query:   176 ALYCSHMEAVQ-NVVRLHK--ACSNANLEE-ISAFASSNSESIKEFLASEAR---EAASI 228
                 S ++A + ++ R ++  A +   LEE +    +    + K+  A+ ++   EA S 
Sbjct:   190 VALTSDLDAAKADLSRANEEAATTKTKLEEQVKTLQAELDATKKDAQAAASKGTEEAKSE 249

Query:   229 YENLQTTLSTQQGEM--AIFAREMRQRFQVTIERTKDIAEYTNGFLQXXXXXXXXXXNYA 286
               +L T ++  + ++  A  + E  Q    T+ +TK I++     L+          +  
Sbjct:   250 VTSLNTKIAKLEEDLEAANKSTETAQAEAATL-KTK-ISK-----LEEDLAAAKSQSDKL 302

Query:   287 VQADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAV 346
              Q  E Q KS+ D     + +TK +TE L+A + +  +S   +Q  L + +       + 
Sbjct:   303 TQEAEAQKKSLDDANAQIQAKTK-ETEDLLAKLKAAEASVAEKQASLEKTQA---ELTST 358

Query:   347 SSKLFLDGHASSVEGITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSG 406
              S L  D  A +      +A++  +A A +A  DAK   +     H   +    + V   
Sbjct:   359 KSSLDSDKSAGAEASKALEAEKASRAEAEKAAADAKSALEAEQKAHADAK----KAVEVE 414

Query:   407 ESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEE-----EVA 461
             ++A    K+  E+    ++ H  +  +L      ++ +    ++T ++A  E     +  
Sbjct:   415 KAAAADAKKAVEAE---KTAHAETKTALEAEKK-AHAETKTALETEKIAAAEAKKSLDSE 470

Query:   462 KSSE-DALQLXXXXXXXXXXXXXXVLDDVKAHEKTINLFRESHSAQSASIK--EKAQETF 518
             K+S+ DA                 V  + KAH +T +      +A + + K  E  + T 
Sbjct:   471 KASKADANSALETQKSAVADAQKAVEAEKKAHAETKSALEAEKTAAADAKKAVESEKSTA 530

Query:   519 Q--QRYMDYEHTGTTPTRCESEVPSKGTIESLRAMPME 554
             Q  Q+ ++ E      T+  SE  +    E+ +A+  E
Sbjct:   531 QEAQKALEAEKAAHAETKKSSEAGTSAVTEAQKALESE 568

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|E1BYQ6 TPR "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 166 (63.5 bits), Expect = 4.1e-08, P = 4.1e-08
 Identities = 88/458 (19%), Positives = 186/458 (40%)

Query:     1 MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
             +  QLE   K+ E LQD  +   R+ + L  + +   +   +  +++N   + L+     
Sbjct:   716 ISTQLEFASKRYEMLQDNVEGYRREITSLHERTQKLSATTQKQEQIINTMTQDLR----G 771

Query:    61 LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKL-NADN-RSVVE 118
               EK   ++E + AEN    +      ++    Q   LL ++ G+   L N    + ++E
Sbjct:   772 ANEK-LAVAEVR-AENLKKEKDILKMSDVRLTQQRESLLVEQRGQNLLLTNLRTIQGILE 829

Query:   119 NFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALY 178
               + E  Q++ +  + ++    Q  + L+   +  H+L    E  ++DLK+++      +
Sbjct:   830 RSETETKQRLNNQVEKLEREISQLKKKLESEVEQRHALTKNQEVHILDLKRQLETETNRH 889

Query:   179 CSHMEAVQNVVR----LHKACSNANLEEISAFAS--------SNSESIKEFLASEAREAA 226
              +  E ++N  +    L +  +N   +  S  +           SE + + L S  R+A 
Sbjct:   890 INTKELLKNAQKEATVLKQQLNNTEAQLASQSSQRAPGKGQPGTSEDVDD-LVSRLRQAD 948

Query:   227 SIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQXXXXXXXXXXNYA 286
                 +L+  L T    +  + R M    + ++ + K + E     ++           Y 
Sbjct:   949 EQVNDLRERLRTSSSNVEQY-RAMVLSLEESLNKEKQVTEEVRATVEARLKESS---EYQ 1004

Query:   287 VQADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAV 346
              Q ++  M+S  + Q+  E++ K+  E +   ++ L  S    Q+E+ EA  +     A+
Sbjct:  1005 AQLEKKLMESEKEKQELQEEKRKA-VENMEQQLSELKKSLSTLQSEVQEA--LQRASTAL 1061

Query:   347 SSKLFLDGHASSVEGITTDAKRKWQAFAM--QADNDAKDGADHSSAKHCRMELLLQECVN 404
             S++            + ++A+ K++   M   AD +A        AK+  ++  L+E   
Sbjct:  1062 SNEQQARRDCQEQAKMASEAQNKYERELMLHAADVEALQAIKEQVAKNTAVKQQLEEAAQ 1121

Query:   405 SGESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSN 442
               ESA    K ++E    M     S++ S   +    N
Sbjct:  1122 KAESALLECKASWEERERMMKDEASTLASRCEDLEKQN 1159

GO:0006606 "protein import into nucleus" evidence=IEA

GO:0000776 "kinetochore" evidence=IEA

GO:0005643 "nuclear pore" evidence=IEA

GO:0007094 "mitotic spindle assembly checkpoint" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

WB|WBGene00011696 eea-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 159 (61.0 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 106/564 (18%), Positives = 228/564 (40%)

Query:     9 QKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALKEKDFII 68
             ++ +++LQ  YD Q  +      ++   E+ +++ +  L+  ++ +K+ +  ++E    +
Sbjct:   305 EETVKQLQISYDAQSEELKQRNERVVQLEARIEENVFELSENKQNVKRLEDKVQESQDAL 364

Query:    69 SEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENFQVELAQQI 128
                     +   Q  +L    E+   +   +      +  +  +    +E   ++L  ++
Sbjct:   365 QMLSNINGSNEEQMISLNSKFERNTAERKRIEAVFEEKVTVQGERLKTLEMANLDLTNEL 424

Query:   129 GSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHMEAVQNV 188
              S+  ++D       E  K + +   S+  + EK + + +KK T  +     H + V+N+
Sbjct:   425 ASMGSLLDKERSLLEEKNKEISERDSSINDLKEK-LAESEKKATKYKNELKEHADLVENL 483

Query:   189 -VRLHKACSNAN--LEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQGEMAI 245
              ++L+K   N+   +E+ISA       +I++      +E   +   LQT  S+++ + A 
Sbjct:   484 TLQLNKLQENSKDLMEKISAGEGGAKMAIEQL----EQEKVKLTNELQT--SSEKTKKA- 536

Query:   246 FAREMRQRFQVTIERTKDI-AEYTNGFLQXXXXXXXXXXNYAVQADENQMKS--IADFQK 302
              + E+  +     ++ +D  A  T+   +            A   DE + K     + +K
Sbjct:   537 -SGELEAKISELEKKLRDAEASRTDKEQKWKQEKESFERKLAEAEDEIKRKGERFVEMEK 595

Query:   303 AYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGI 362
               E++ +  T++ +    +LV+S   +  E ++    D RE  V  K   D H    +  
Sbjct:   596 EMEEERQKATDRTLKLKDALVNSE--KNLETIKKESED-REKIVREK---DAHLEENKKR 649

Query:   363 TTDAKRKWQAFAMQA-DNDAKDGADHSSAKHCRMELL-LQECVNSGESAFGHWKRTYESV 420
               DA +K +    +A + +A   +  ++      EL  L+  +    S     K   E V
Sbjct:   650 IEDAVQKLEEAEKRARELEASVSSRDTTVSTKESELSELKGKLTESNSFIEELKVQVEKV 709

Query:   421 -NEMESKH--VSSMISLTRN--ASYSNEQHDVEVDTARVATEEEVA----KSSEDALQLX 471
              NE+  K   V ++++  R+  A +  ++ + E    R   + E A    KS ++ L   
Sbjct:   710 SNEISEKQQEVENLMAEMRDKEAHWKTKRDEFEAQMLRNQEDNEEASSTLKSVQEQLMKE 769

Query:   472 XXXXXXXXXXXXXV---LDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHT 528
                          V   L+++K   + +    E  + +   +K     T Q+R  D E T
Sbjct:   770 KETSGEEKNQLISVKSQLEELKTEVERLIRSEEEKTQEIEKLKSAVTATTQER--D-ELT 826

Query:   529 GTTP---TRCESEVPSKGTIESLR 549
              T+    T CE+      +IE  R
Sbjct:   827 ATSESLRTECENLNSKIQSIEESR 850

GO:0046872 "metal ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006897 "endocytosis" evidence=IMP

GO:0030139 "endocytic vesicle" evidence=IDA

GO:0005769 "early endosome" evidence=IDA

GO:0032266 "phosphatidylinositol-3-phosphate binding" evidence=ISS;IMP

UNIPROTKB|F1NXA1 KIF11 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 150 (57.9 bits), Expect = 8.8e-07, P = 8.8e-07
 Identities = 108/579 (18%), Positives = 217/579 (37%)

Query:     4 QLETHQKQLEELQDKYDC---QVRQCSDLTT--KLELTESNLDQTIKL--LNNTEEQLKK 56
             +L   ++Q+ E  DK      ++++ ++L T  K EL +   D  IK   L  T++ L++
Sbjct:   413 KLTVQEEQIAEYIDKISVMEEEMKRVTELFTVNKNELKQCKTDLEIKEKELEETQKDLQE 472

Query:    57 CQYALKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSV 116
              +  L E+++++S  + AE  L   A  L   +E+  +D   L  K+ R+  ++  N  V
Sbjct:   473 TKVHLAEEEYVVSVLENAEQKLHGTASKLLNTVEETTKDVSGLHAKLDRKKAVDQHNAIV 532

Query:   117 VENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRA 176
                F  ++      + D V+ ++ +Q + L         +L     A   L   V+AS  
Sbjct:   533 QNTFAQQMTDLFNKIQDSVNENSVKQQQMLTSYTNFIGDILSTSSSASNILTSVVSAS-- 590

Query:   177 LYCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTL 236
              + S  E V   V    +C +  + +    +  +   +   +   A    S   +L    
Sbjct:   591 -FASLKELVSTEV----SCMSEKVLQHENLSLDHKAELLRLIEEHASGLGSALNSLTP-- 643

Query:   237 STQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQXXXXXXXXXXNYAVQADENQMKS 296
                   M  F   +  +FQ  +++   +A+  NG  +              +  E     
Sbjct:   644 ------MVEFVLGLNCQFQTNVKKYSAVADKMNGHKKEMDTFFEDLSLTLKKLQEETASV 697

Query:   297 IADFQKAYE---DQTKSDTEKLIADVTSLVSSHMRRQTEL----VEARLVDFRENAVSSK 349
             +A  Q   E   ++ +   +    +   L+SS ++RQ +L     +  L D      S K
Sbjct:   698 LAQLQNDCENLREEVEMTRQAHTKNAAELMSS-LQRQLDLFAQETQKNLADVLAKNGSLK 756

Query:   350 LFLDGHASSVEGITTD----AKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNS 405
               +     +V   TTD           F    DN +K+    +S ++ RM   L++  + 
Sbjct:   757 TTITAVQENVHLKTTDLVSSTASNHSRFLASVDNFSKELRTINS-ENKRM---LEDSTDR 812

Query:   406 GESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSE 465
              +    + +   +  ++     ++ + S T     S      ++   +    E   K+  
Sbjct:   813 CQQLLINLRNVSQDADKCAELTIAQIASFTDQQLLSFRDEKQQLMCFQKKNRENCEKAIA 872

Query:   466 DALQLXXXXXXXXXXXXXXVLDDVKAHEKTINLFRESHSAQSASIKEKAQET-FQQRYMD 524
             +                  +LD +K  +    L  +  +    + +  AQ   F +  + 
Sbjct:   873 EIADHIDTQKSAEEKVLNGLLDQMKVDQGV--LLEQKLALNEEAQRGLAQVNGFLKEDLK 930

Query:   525 YE-HTGTTPTRCESEVPSKGTIESLRAMPMETLLEEFRE 562
              +  TGTTP R +   P    +  ++  P E LLE+ R+
Sbjct:   931 VDIPTGTTPQRRDYSYP----VTLVKTEPRELLLEQLRQ 965

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000922 "spindle pole" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005876 "spindle microtubule" evidence=IEA

GO:0007100 "mitotic centrosome separation" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0090307 "spindle assembly involved in mitosis" evidence=IEA

UNIPROTKB|F1S300 TPR "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 153 (58.9 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 110/594 (18%), Positives = 231/594 (38%)

Query:     1 MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
             +  QL+   K+ E LQD  +   R+ + L  + +   +   +  +++N   + L+     
Sbjct:   714 ISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQDLR----G 769

Query:    61 LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKL-NADN-RSVVE 118
               EK   ++E + AEN    +       +  + Q   LL ++ G+   L N    + ++E
Sbjct:   770 ANEK-LAVAEVR-AENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILE 827

Query:   119 NFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALY 178
               + E  Q++ +  + ++       + L++  +  H+L    +  ++D K+++     L+
Sbjct:   828 RSETETKQRLSNQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLH 887

Query:   179 CSHMEAVQN----VVRLHKACSN--ANLEEISAFAS-----SNSESIKEFLASEAREAAS 227
              +  E  +N    +  L +  SN  A L   S+  S     SN E + + L S+ R+A  
Sbjct:   888 LNTKELFKNAQKEIATLKQHLSNMEAQLASQSSQRSGKGQPSNKEDMDDLL-SQLRQAEE 946

Query:   228 IYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQXXXXXXXXXXNYAV 287
                +L+  L T    +  + R M    + ++ + K +AE  +  ++           +  
Sbjct:   947 QVNDLKERLKTSTSNVEQY-RAMVTSLEESLNKEKQVAEEVHKNIEVRLKESA---EFQT 1002

Query:   288 QADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVS 347
             Q ++  M+   + Q+  +D+ K+  E +   ++ L  +    Q+E+ EA  +     A+S
Sbjct:  1003 QLEKKLMEVEKEKQELQDDKRKA-IESMEQQLSELKKTLSSVQSEVQEA--LQRAGTALS 1059

Query:   348 SKLFLDGHASSVEGITTDAKRKWQAFAM--QADNDAKDGADHSSAKHCRMELLLQECVNS 405
             ++            I  +A+ K++   M   AD +A   A    +K   +   L+E    
Sbjct:  1060 NEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQK 1119

Query:   406 GESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQ-HDVEVDTARVATEEEVAKSS 464
              ES     K ++E    M    VS  +S   +    N   HD +++         V +  
Sbjct:  1120 AESQLLECKASWEERERMLKDEVSKCVSRCEDLEKQNRLLHD-QIEKLSDKVVASVKEGI 1178

Query:   465 EDALQLXXXXXXXXXXXXXXVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMD 524
             +  L +              +L  ++  EK I   R    AQ  S++ + +    +R + 
Sbjct:  1179 QGPLNVSISEEGKSQEQILEILRFIR-REKEIAETR-FEVAQVESLRYRQRVELLERELQ 1236

Query:   525 YEHTGTTPTRCESEVPSKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSL 578
                      R + +V +K   +    M     +    E N     + + L+  L
Sbjct:  1237 ELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDL 1290

GO:0031965 "nuclear membrane" evidence=IEA

GO:0007094 "mitotic spindle assembly checkpoint" evidence=IEA

GO:0005643 "nuclear pore" evidence=IEA

GO:0000776 "kinetochore" evidence=IEA

GO:0006606 "protein import into nucleus" evidence=IEA

GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004828 "serine-tRNA ligase activity" evidence=IEA

UNIPROTKB|F6UV28 TPR "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 150 (57.9 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 107/594 (18%), Positives = 228/594 (38%)

Query:     1 MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
             +  QL+   K+ E LQD  +   R+ + L  + +   +   +  +++N   + L+     
Sbjct:   478 ISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQDLR----G 533

Query:    61 LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKL-NADN-RSVVE 118
               EK   ++E + AEN    +       +  + Q   LL ++ G+   L N    + ++E
Sbjct:   534 ANEK-LAVAEVR-AENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILE 591

Query:   119 NFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALY 178
               + E  Q++ S  + ++       + L++  +  H+L    +  ++D K+++     L+
Sbjct:   592 RSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLH 651

Query:   179 CSHMEAVQN----VVRLHKACSNANLEEISAFAS-------SNSESIKEFLASEAREAAS 227
              +  E ++N    +  L +  SN  ++  S  +        SN E + + L S+ R+A  
Sbjct:   652 LNTKELLKNAQKEIATLKQHLSNMEVQLASQSSQRTGKGQPSNKEDVDDLL-SQLRQAEE 710

Query:   228 IYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQXXXXXXXXXXNYAV 287
                +L+  L T    +  + R M    + ++ + K + E     ++           +  
Sbjct:   711 QVNDLKERLKTSTSNVEQY-RAMVTSLEESLNKEKQVTEEVRKNIEVRLKESA---EFQT 766

Query:   288 QADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVS 347
             Q ++  M+   + Q+  +D+ K+  E +   ++ L  +    Q E+ EA  +     A+S
Sbjct:   767 QLEKKLMEVEKEKQELQDDKRKA-IESMEHQLSELKKTLNSVQNEVQEA--LQRASTALS 823

Query:   348 SKLFLDGHASSVEGITTDAKRKWQAFAM--QADNDAKDGADHSSAKHCRMELLLQECVNS 405
             ++            I  +A+ K++   M   AD +A   A    +K   +   L+E    
Sbjct:   824 NEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQK 883

Query:   406 GESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQ-HDVEVDTARVATEEEVAKSS 464
              ES     K ++E    M    VS  +S   +    N   HD +++         V +  
Sbjct:   884 AESQLLECKASWEERERMLKDEVSKCMSRCEDLEKQNRLLHD-QIEKLSDKVVASVKEGV 942

Query:   465 EDALQLXXXXXXXXXXXXXXVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMD 524
             +  L +              +L  ++  EK I   R    AQ  S++ + +    +R + 
Sbjct:   943 QGPLNVSLSEEGKSQEQILEILRFIR-REKEIAETR-FEVAQVESLRYRQRVELLERELQ 1000

Query:   525 YEHTGTTPTRCESEVPSKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSL 578
                      R + +V +K   +    M     +    E N     + + L+  L
Sbjct:  1001 ELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDL 1054

GO:0006606 "protein import into nucleus" evidence=IEA

GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005643 "nuclear pore" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004828 "serine-tRNA ligase activity" evidence=IEA

UNIPROTKB|E2QSE6 TPR "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 150 (57.9 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 107/594 (18%), Positives = 228/594 (38%)

Query:     1 MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYA 60
             +  QL+   K+ E LQD  +   R+ + L  + +   +   +  +++N   + L+     
Sbjct:   716 ISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQDLR----G 771

Query:    61 LKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKL-NADN-RSVVE 118
               EK   ++E + AEN    +       +  + Q   LL ++ G+   L N    + ++E
Sbjct:   772 ANEK-LAVAEVR-AENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILE 829

Query:   119 NFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALY 178
               + E  Q++ S  + ++       + L++  +  H+L    +  ++D K+++     L+
Sbjct:   830 RSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLH 889

Query:   179 CSHMEAVQN----VVRLHKACSNANLEEISAFAS-------SNSESIKEFLASEAREAAS 227
              +  E ++N    +  L +  SN  ++  S  +        SN E + + L S+ R+A  
Sbjct:   890 LNTKELLKNAQKEIATLKQHLSNMEVQLASQSSQRTGKGQPSNKEDVDDLL-SQLRQAEE 948

Query:   228 IYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQXXXXXXXXXXNYAV 287
                +L+  L T    +  + R M    + ++ + K + E     ++           +  
Sbjct:   949 QVNDLKERLKTSTSNVEQY-RAMVTSLEESLNKEKQVTEEVRKNIEVRLKESA---EFQT 1004

Query:   288 QADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVS 347
             Q ++  M+   + Q+  +D+ K+  E +   ++ L  +    Q E+ EA  +     A+S
Sbjct:  1005 QLEKKLMEVEKEKQELQDDKRKA-IESMEHQLSELKKTLNSVQNEVQEA--LQRASTALS 1061

Query:   348 SKLFLDGHASSVEGITTDAKRKWQAFAM--QADNDAKDGADHSSAKHCRMELLLQECVNS 405
             ++            I  +A+ K++   M   AD +A   A    +K   +   L+E    
Sbjct:  1062 NEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQK 1121

Query:   406 GESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQ-HDVEVDTARVATEEEVAKSS 464
              ES     K ++E    M    VS  +S   +    N   HD +++         V +  
Sbjct:  1122 AESQLLECKASWEERERMLKDEVSKCMSRCEDLEKQNRLLHD-QIEKLSDKVVASVKEGV 1180

Query:   465 EDALQLXXXXXXXXXXXXXXVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMD 524
             +  L +              +L  ++  EK I   R    AQ  S++ + +    +R + 
Sbjct:  1181 QGPLNVSLSEEGKSQEQILEILRFIR-REKEIAETR-FEVAQVESLRYRQRVELLERELQ 1238

Query:   525 YEHTGTTPTRCESEVPSKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSL 578
                      R + +V +K   +    M     +    E N     + + L+  L
Sbjct:  1239 ELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDL 1292

GO:0006606 "protein import into nucleus" evidence=IEA

GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005643 "nuclear pore" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004828 "serine-tRNA ligase activity" evidence=IEA

UNIPROTKB|P82094 TMF1 "TATA element modulatory factor" [Homo sapiens (taxid:9606)]

 Score = 146 (56.5 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 123/592 (20%), Positives = 234/592 (39%)

Query:     4 QLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALKE 63
             +++     +  L+D++    ++ ++   K++L     D   K + N +E+L     + + 
Sbjct:   488 RVKEESSSISSLKDEF---TQRIAEAEKKVQLACKERDAAKKEIKNIKEELATRLNSSET 544

Query:    64 KDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENFQV- 122
              D ++ E+ +    L  +       L K    N  + +K+  +DK N +N     N +V 
Sbjct:   545 AD-LLKEKDEQIRGLMEEG----EKLSKQQLHNSNIIKKLRAKDKEN-ENMVAKLNKKVK 598

Query:   123 ELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAV----IDLKKKVTASRALY 178
             EL +++  L  ++D     + +H ++++KL +S++   EK +    +D+ +    +R++ 
Sbjct:   599 ELEEELQHLKQVLDGKEEVEKQHRENIKKL-NSMVERQEKDLGRLQVDMDELEEKNRSIQ 657

Query:   179 CSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLST 238
              +   A + +  LHKA + A   E    A S     KE L++   +A       Q TL+ 
Sbjct:   658 AALDSAYKELTDLHKA-NAAKDSEAQEAALSREMKAKEELSAALEKAQEEARQQQETLAI 716

Query:   239 QQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQXXXXXXXXXXNYAVQADENQ----M 294
             Q G++    R   QR +    R +D   +  G LQ              Q+  +     +
Sbjct:   717 QVGDL----RLALQRTEQAAARKEDYLRHEIGELQQRLQEAENRNQELSQSVSSTTRPLL 772

Query:   295 KSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDG 354
             + I + Q     QT S  EKL  +++  +      QT L  A  V+ RE A + +L  + 
Sbjct:   773 RQIENLQATLGSQTSS-WEKLEKNLSDRLGES---QTLLAAA--VE-RERAATEELLANK 825

Query:   355 -HASSVEGITTDAKRKWQAFAMQADNDAKDGA---DHSSAKHCRMELLLQECVNSGESAF 410
                SS+E   +  +++   F  Q +++        D ++     +E L  E V + E   
Sbjct:   826 IQMSSMESQNSLLRQENSRFQAQLESEKNRLCKLEDENNRYQVELENLKDEYVRTLEETR 885

Query:   411 GHWKRTYESVNEMESKHVSS---MISLTRNASYSNEQHDVEVD-TARVATEEEVAKSSED 466
                K    S  EME   V         T+      E+    V  T  ++    ++     
Sbjct:   886 KE-KTLLNSQLEMERMKVEQERKKAIFTQETIKEKERKPFSVSSTPTMSRSSSISGVDMA 944

Query:   467 ALQLXXXXXXXXXXXXXXVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYE 526
              LQ                +  + A+    NL+        +SI E  Q   + R  +  
Sbjct:   945 GLQTSFLSQDESHDHSFGPMP-ISANGS--NLYDAVRMGAGSSIIENLQSQLKLREGEIT 1001

Query:   527 HTGTTPTRCESEVPSKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSL 578
             H        + E+   G +E  R++  E L++   +N+  E   VKE+ P L
Sbjct:  1002 HL-------QLEI---GNLEKTRSIMAEELVKLTNQNDELEE-KVKEI-PKL 1041

GO:0003677 "DNA binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003712 "transcription cofactor activity" evidence=TAS

GO:0006366 "transcription from RNA polymerase II promoter" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005794 "Golgi apparatus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	588
KOG0243	1041	consensus Kinesin-like protein [Cytoskeleton]	100.0
PF13931	143	Microtub_bind: Kinesin-associated microtubule-bind	99.34
KOG0243	1041	consensus Kinesin-like protein [Cytoskeleton]	99.26
KOG0994	1758	consensus Extracellular matrix glycoprotein Lamini	96.92
PF00038	312	Filament: Intermediate filament protein; InterPro:	96.11
KOG0161	1930	consensus Myosin class II heavy chain [Cytoskeleto	95.8
KOG0161	1930	consensus Myosin class II heavy chain [Cytoskeleto	95.76
KOG0994	1758	consensus Extracellular matrix glycoprotein Lamini	95.59
PF01442	202	Apolipoprotein: Apolipoprotein A1/A4/E domain; Int	95.15
COG1196	1163	Smc Chromosome segregation ATPases [Cell division	94.35
KOG0977	546	consensus Nuclear envelope protein lamin, intermed	94.16
TIGR00606	1311	rad50 rad50. This family is based on the phylogeno	93.21
KOG0250	1074	consensus DNA repair protein RAD18 (SMC family pro	92.1
PF07464	155	ApoLp-III: Apolipophorin-III precursor (apoLp-III)	91.66
TIGR02169	1164	SMC_prok_A chromosome segregation protein SMC, pri	91.51
PRK11637	428	AmiB activator; Provisional	91.08
TIGR02168	1179	SMC_prok_B chromosome segregation protein SMC, com	89.94
KOG4674	1822	consensus Uncharacterized conserved coiled-coil pr	89.86
KOG0996	1293	consensus Structural maintenance of chromosome pro	89.77
PF13949	296	ALIX_LYPXL_bnd: ALIX V-shaped domain binding to HI	89.63
PF05667	594	DUF812: Protein of unknown function (DUF812); Inte	89.21
PRK13895	144	conjugal transfer protein TraM; Provisional	88.12
KOG4674	1822	consensus Uncharacterized conserved coiled-coil pr	87.72
PRK04863	1486	mukB cell division protein MukB; Provisional	87.26
PF04394	45	DUF536: Protein of unknown function, DUF536; Inter	83.05
PF07888	546	CALCOCO1: Calcium binding and coiled-coil domain (	82.68
TIGR00606	1311	rad50 rad50. This family is based on the phylogeno	82.18
PRK11637	428	AmiB activator; Provisional	81.65

>KOG0243 consensus Kinesin-like protein [Cytoskeleton]

Probab=100.00  E-value=7.4e-52  Score=466.72  Aligned_cols=587  Identities=27%  Similarity=0.371  Sum_probs=571.2

Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 007823            1 MGVQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALKEKDFIISEQKKAENALTH   80 (588)
Q Consensus         1 me~~le~~~k~~~~~~~~~~~~~~~~~dlk~ele~t~~~L~~T~~~L~~Te~~L~~tk~~l~Ee~~l~~~~~~tE~~L~~   80 (588)
                      ||.+|+..+++|.+++++|-.+.....+|+++++.++..|..+...|+.+++.+.+++..|++++||++.+.++|..|..
T Consensus       453 le~el~~~~~~l~~~~e~~~~~~~~~~~l~~~~~~~k~~L~~~~~el~~~~ee~~~~~~~l~~~e~ii~~~~~se~~l~~  532 (1041)
T KOG0243|consen  453 LEEELENLEKQLKDLTELYMNQLEIKELLKEEKEKLKSKLQNKNKELESLKEELQQAKATLKEEEEIISQQEKSEEKLVD  532 (1041)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhchhHHHhHhhhhhHhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhH
Q 007823           81 QACTLRGNLEKALQDNVLLFQKIGREDKLNADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIH  160 (588)
Q Consensus        81 ~A~~L~~~l~~s~~Dv~gLh~Kl~Rk~~le~~Nr~~~~~f~~~l~~~~~~l~~~v~~~~~qQ~~~l~~~~~~~~sfv~~~  160 (588)
                      +|+.|+..++.++.|+++||.||||+.++++.|+.+.+.|+.++...++.+..+|+...++|..+|..|...+.+|++.+
T Consensus       533 ~a~~l~~~~~~s~~d~s~l~~kld~~~~~~d~n~~~~~~~~~~l~~~~~~~~~~v~~~~s~~~~~l~~~~~~~~s~~s~~  612 (1041)
T KOG0243|consen  533 RATKLRRSLEESQDDLSSLFEKLDRKDRLDDDNQEVIDDFQSQLSENLSTLHGLVASSSSQQISQLTTMLAQMESFLSAK  612 (1041)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhccccccHHHHHHHhhhhhHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 007823          161 EKAVIDLKKKVTASRALYCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQ  240 (588)
Q Consensus       161 ~~a~~~l~~~i~~~kd~~~s~le~i~~l~~~~k~~~~~~le~lss~~~~~~~~v~~f~~sl~~e~~sv~~dlq~~L~~Qk  240 (588)
                      ..+...++.++...++.|++++++++.+...++..+.+.++.|.+...++.++++.++......+..++++++..|..|+
T Consensus       613 ~~~~e~~~t~~~~~r~~~~~~~e~~q~~~~~~k~~~~s~l~~i~s~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~l~~q~  692 (1041)
T KOG0243|consen  613 SKATEIMKTKISKDRDILSEVLESLQQLQEVLKKDSESCLEVINSSITSSINELESMLETIANTADDLLQNISSRLSNQQ  692 (1041)
T ss_pred             ccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHhhhhHHHHHHHHHHhhHHHHHHHHHHHH
Q 007823          241 GEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADFQKAYEDQTKSDTEKLIADVT  320 (588)
Q Consensus       241 ~~l~~~~~ql~~~~~~~~~~~~~~s~~l~~fl~~l~~~~~~L~~~~~~~~~~~~~~L~~~~~~~e~~a~~e~~~Ll~~I~  320 (588)
                      +.+..+++|.+..+......++.++..+..||+++..++..+++.....+......+.+|++.|+. .+.+.++++++|.
T Consensus       693 ~~~~l~~~qe~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~  771 (1041)
T KOG0243|consen  693 EILSLFANQELQELVLSQDSAQELSELTSTFFQTLDNQAEKLTNLFSEANISLSQKLSSFQKKFES-IAEDEKQLVEDIK  771 (1041)
T ss_pred             hHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhHHHHHHHHHHhhhHHh-hHHHHHHHHHHHH
Confidence            999999999898899999999999999999999999999999999999999999999999999999 7778889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHhhccccccccchhhhhhhHHHHHHH
Q 007823          321 SLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQ  400 (588)
Q Consensus       321 ~Ll~~~~~~q~~~l~~~~~~l~~~~~~~~~~l~~~~ss~q~~~~~~k~~~~~~~~~~e~~~~e~~~~~~~~~~~mE~~lq  400 (588)
                      .++.++.+++.+++..++..++.........+...++.++.+...++..|..+..+++.++.+...+++.+++.|+..++
T Consensus       772 e~~~~~~q~~~e~~~~~~~~~~~~~~~~~~~~~e~~~~~~~l~~~~k~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  851 (1041)
T KOG0243|consen  772 ELLSSHDQRNNELLDIALQTLRSAVNSRESNLTESVSVMQNLSDDLKTIWQTLGKQNENHHNEVLSAIEEKQQAMKSVLK  851 (1041)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhHHHhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhhhhHHHHHHHHHHHHhhhHhHHHHHHHHHHhhhccchhhHhhhhhhhhhHHHHHhhHHHHHHHHHhhHHHHHH
Q 007823          401 ECVNSGESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQLIASASEQEQA  480 (588)
Q Consensus       401 ~~~~~~~~sv~~~~~~~~ql~~l~~~q~~~ld~~v~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~i~~~i~~~~~~~~~  480 (588)
                      .|...+...+.+|+.+..++.++...+++.++.+++.+.+++..+..++.++.......++....+|.+.++.....+..
T Consensus       852 ~~~~~~~~~~~~~~~~~~~lk~~~~~~~~~~~~l~~~~~~~~~k~~~e~~s~~~~~~~~~~~~~~~i~t~~~~~~~~~~~  931 (1041)
T KOG0243|consen  852 ELLENAESQVDECKEAIESLKSLESNHVATLDSLVRGVSEQNKKLQDEFLSLLNSKLNSFDVLTNSIVTPHSILLKLDDD  931 (1041)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHhhhhhhhHHhhHHHHHHHhHHHhhhhhcccccccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999988899999999999999999999999


Q ss_pred             HHHHHHhhHHHhHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhcccCCCCCCcccc-cccCCccchhhccCCcHHHHHHH
Q 007823          481 SIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCE-SEVPSKGTIESLRAMPMETLLEE  559 (588)
Q Consensus       481 ~~~~~~~~~~~~~~~L~~l~~~~~~~l~~i~~~~~~~l~~~l~~d~PTGtTP~Kr~-~~yPs~lsi~~~rT~p~e~LL~~  559 (588)
                      ........+..+...+..|..++..+...|..+++.|+..+|.+|.|++.||.+.. ++.|+..+|++++++|.+.++++
T Consensus       932 ~~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~p~~~sp~~~s~~~~~s~~~v~~~~~~~~e~~~~~ 1011 (1041)
T KOG0243|consen  932 VLPETLVIISPSLELLGELFQDLEHKDRDIENNSGETSLDDYVVDEPSTSSPTKLSRINIPSIGSVESLTTPFSEGTLRE 1011 (1041)
T ss_pred             ccccchHhhcccHHHHHHhhccccchhhhhhhccccccchhhcccccCCCCccccccCCCCCcccccccccCcccccccc
Confidence            99999999999999999999999999999999999999999999999999999999 89999999999999999999999


Q ss_pred             HHhcCCCCcccccccCCCCCCCCCCCCCC
Q 007823          560 FRENNSYESFDVKELKPSLIPRSPLSQIN  588 (588)
Q Consensus       560 fr~~~~~~~~~~~~~~~~~~~r~pl~~~n  588 (588)
                      ++..+.++....+.-++....|+||..+|
T Consensus      1012 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~n 1040 (1041)
T KOG0243|consen 1012 SRLNNELEVFKTGEIKGVSNGRPPLSAQN 1040 (1041)
T ss_pred             cccccchhhhccccccCCCCCCCchhhcc
Confidence            99999887766666666889999999987

>PF13931 Microtub_bind: Kinesin-associated microtubule-binding

Probab=99.34  E-value=5.2e-13  Score=121.78  Aligned_cols=42  Identities=38%  Similarity=0.506  Sum_probs=40.2

Q ss_pred             hhhcccCCCCCCcccccccCCccchhhccCCcHHHHHHHHHhcCCC
Q 007823          521 RYMDYEHTGTTPTRCESEVPSKGTIESLRAMPMETLLEEFRENNSY  566 (588)
Q Consensus       521 ~l~~d~PTGtTP~Kr~~~yPs~lsi~~~rT~p~e~LL~~fr~~~~~  566 (588)
                      +|++|+|||+||+||.|.||+.|    +||.||+.||++||..+.+
T Consensus         1 dl~~~~pTG~TP~rk~y~YP~~L----~~T~ph~~ll~~~r~~~~~   42 (143)
T PF13931_consen    1 DLKEYVPTGTTPQRKEYQYPRTL----PRTEPHERLLRRLREEQEE   42 (143)
T ss_pred             CCccccCCCCCCCcccccCCCcc----CCCCcHHHHHHHHHhccch
Confidence            58999999999999999999999    9999999999999998875

>KOG0243 consensus Kinesin-like protein [Cytoskeleton]

Probab=99.26  E-value=1e-05  Score=94.10  Aligned_cols=227  Identities=12%  Similarity=0.085  Sum_probs=118.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHhhccccccccchhhhhhh
Q 007823          314 KLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAFAMQADNDAKDGADHSSAKHC  393 (588)
Q Consensus       314 ~Ll~~I~~Ll~~~~~~q~~~l~~~~~~l~~~~~~~~~~l~~~~ss~q~~~~~~k~~~~~~~~~~e~~~~e~~~~~~~~~~  393 (588)
                      .++.-+-.=+......-++++..+...+...+....+.+.......++.-.++++-...+..+.                
T Consensus       718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~~~q~~----------------  781 (1041)
T KOG0243|consen  718 ELTSTFFQTLDNQAEKLTNLFSEANISLSQKLSSFQKKFESIAEDEKQLVEDIKELLSSHDQRN----------------  781 (1041)
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHhhHHHHHHHHHHhhhHHhhHHHHHHHHHHHHHHHHHHHHHH----------------
Confidence            3333333334555556677777778888888887777777644344444444444444444332                


Q ss_pred             HHHHHHHHHhhhhhhhhH-HHHHHHHHHHHhh---hHhHHHHHHHHHHhhhccchhhHhhhhhhhhhHHHHHhhHHHHHH
Q 007823          394 RMELLLQECVNSGESAFG-HWKRTYESVNEME---SKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQ  469 (588)
Q Consensus       394 ~mE~~lq~~~~~~~~sv~-~~~~~~~ql~~l~---~~q~~~ld~~v~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~i~~  469 (588)
                        -+.+..-+.|...++. ........+..|.   ..-....+++..   ++..++........... ...+.....+..
T Consensus       782 --~e~~~~~~~~~~~~~~~~~~~~~e~~~~~~~l~~~~k~~~~~~~~---~~~~~~~~~~~~~e~~~-~~~~~~~~~~~~  855 (1041)
T KOG0243|consen  782 --NELLDIALQTLRSAVNSRESNLTESVSVMQNLSDDLKTIWQTLGK---QNENHHNEVLSAIEEKQ-QAMKSVLKELLE  855 (1041)
T ss_pred             --HHHHHHHHHHHHHhhccchhHHHHhhHHHhhhhHHHHHHHHHHHH---HHHhhhhHHHHHHHHHH-HHHHHHHHHHHH
Confidence              1334444444555552 2444443333332   111111111111   22222222222222222 333444444444


Q ss_pred             HHHhhHHHHHHHHHHHHhhHHHhHHHHHHHHHHh--------hhhHHHHHHHHHHHHHhhhhcccCCCCCCcccccccCC
Q 007823          470 LIASASEQEQASIAEVLDDVKAHEKTINLFRESH--------SAQSASIKEKAQETFQQRYMDYEHTGTTPTRCESEVPS  541 (588)
Q Consensus       470 ~i~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~--------~~~l~~i~~~~~~~l~~~l~~d~PTGtTP~Kr~~~yPs  541 (588)
                      .+..+.+..+.....+.+....+...+..+-.+.        .+-+..+......|......-+.|+|.+|....+.||.
T Consensus       856 ~~~~~~~~~~~~~~~lk~~~~~~~~~~~~l~~~~~~~~~k~~~e~~s~~~~~~~~~~~~~~~i~t~~~~~~~~~~~~~~~  935 (1041)
T KOG0243|consen  856 NAESQVDECKEAIESLKSLESNHVATLDSLVRGVSEQNKKLQDEFLSLLNSKLNSFDVLTNSIVTPHSILLKLDDDVLPE  935 (1041)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccchHHHHHHhhhhhhhHHhhHHHHHHHhHHHhhhhhcccccccccccccccccccccc
Confidence            4444444333344444444333333333321111        12333333445566668888999999999999999999


Q ss_pred             ccchhhccCCcHHHHHHHHHhcCCC
Q 007823          542 KGTIESLRAMPMETLLEEFRENNSY  566 (588)
Q Consensus       542 ~lsi~~~rT~p~e~LL~~fr~~~~~  566 (588)
                      .+    .++.|+..++..++++..|
T Consensus       936 t~----~~~~~~~~~~~~l~~~~~~  956 (1041)
T KOG0243|consen  936 TL----VIISPSLELLGELFQDLEH  956 (1041)
T ss_pred             ch----HhhcccHHHHHHhhccccc
Confidence            99    9999999999999885543

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]

Probab=96.92  E-value=1.5  Score=52.28  Aligned_cols=43  Identities=7%  Similarity=0.006  Sum_probs=27.3

Q ss_pred             HHHHHHHHHHhhhHhHHHHHHHHHHhhhccchhhHhhhhhhhhh
Q 007823          413 WKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVAT  456 (588)
Q Consensus       413 ~~~~~~ql~~l~~~q~~~ld~~v~~~~~~~~~~~~~~~s~~~~~  456 (588)
                      --.+++-+..|+ ...+.++.++++..+-+..-+.+...+..-+
T Consensus      1656 A~~a~q~~~~lq-~~~~~~~~l~~~r~~g~~~ar~rAe~L~~eA 1698 (1758)
T KOG0994|consen 1656 ALSAEQGLEILQ-KYYELVDRLLEKRMEGSQAARERAEQLRTEA 1698 (1758)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Confidence            555666667777 7778888888766555555555555555544

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope

Probab=96.11  E-value=2.2  Score=44.62  Aligned_cols=59  Identities=14%  Similarity=0.070  Sum_probs=26.0

Q ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 007823          131 LCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHMEAVQNVVRLH  192 (588)
Q Consensus       131 l~~~v~~~~~qQ~~~l~~~~~~~~sfv~~~~~a~~~l~~~i~~~kd~~~s~le~i~~l~~~~  192 (588)
                      |...|.....+....+......+..+...+   +.++..+..........+-+++..++..+
T Consensus       167 L~~~L~eiR~~ye~~~~~~~~e~e~~y~~k---~~~l~~~~~~~~~~~~~~~~E~~~~r~~~  225 (312)
T PF00038_consen  167 LSAALREIRAQYEEIAQKNREELEEWYQSK---LEELRQQSEKSSEELESAKEELKELRRQI  225 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhhhhHHHHHHHHHhhhhhhhhhhcccc---cccccccccccccccchhHhHHHHHHhhh
Confidence            333334444444445555555555443322   33344444444444444444444444444

They generally form filamentous structures 8 to 14 nm wide. IF proteins are members of a very large multigene family of proteins which has been subdivided in five major subgroups: Type I: Acidic cytokeratins. Type II: Basic cytokeratins. Type III: Vimentin, desmin, glial fibrillary acidic protein (GFAP), peripherin, and plasticin. Type IV: Neurofilaments L, H and M, alpha-internexin and nestin. Type V: Nuclear lamins A, B1, B2 and C. All IF proteins are structurally similar in that they consist of: a central rod domain comprising some 300 to 350 residues which is arranged in coiled-coiled alpha-helices, with at least two short characteristic interruptions; a N-terminal non-helical domain (head) of variable length; and a C-terminal domain (tail) which is also non-helical, and which shows extreme length variation between different IF proteins. While IF proteins are evolutionary and structurally related, they have limited sequence homologies except in several regions of the rod domain. This entry represents the central rod domain found in IF proteins.; PDB: 3TNU_B 3KLT_D 1GK4_F 3TRT_A 3G1E_A 3UF1_C 1GK6_B 1GK7_A 3TYY_B 3V4W_A ....

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]

Probab=95.80  E-value=9.3  Score=49.22  Aligned_cols=36  Identities=19%  Similarity=0.341  Sum_probs=14.0

Q ss_pred             HHHHHHHHHHHHHHHHhHhhhHHHHHHHHhHHHHHH
Q 007823           10 KQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIK   45 (588)
Q Consensus        10 k~~~~~~~~~~~~~~~~~dlk~ele~t~~~L~~T~~   45 (588)
                      +++.++.+.++..+....++..+....+..+...+.
T Consensus       908 ~~l~~~~~~~e~~ee~~~~le~~~~~~~~e~~~l~~  943 (1930)
T KOG0161|consen  908 KELKELKERLEEEEEKNAELERKKRKLEQEVQELKE  943 (1930)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444444444443333333333333333333333

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]

Probab=95.76  E-value=9.6  Score=49.09  Aligned_cols=54  Identities=13%  Similarity=0.151  Sum_probs=33.8

Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007823          207 ASSNSESIKEFLASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERT  261 (588)
Q Consensus       207 ~~~~~~~v~~f~~sl~~e~~sv~~dlq~~L~~Qk~~l~~~~~ql~~~~~~~~~~~  261 (588)
                      .......+.+ +.....++...+..+.+........+..+++++.+..++-...+
T Consensus      1268 ~~~l~~E~~~-l~~~lee~e~~~~~~~r~~~~~~~qle~~k~qle~e~r~k~~l~ 1321 (1930)
T KOG0161|consen 1268 RSRLQNENEE-LSRQLEEAEAKLSALSRDKQALESQLEELKRQLEEETREKSALE 1321 (1930)
T ss_pred             HHHhhhhHHH-HhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333334444 44455556667777777777777777777777777666544433

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]

Probab=95.59  E-value=7.6  Score=46.77  Aligned_cols=33  Identities=6%  Similarity=0.081  Sum_probs=18.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 007823          160 HEKAVIDLKKKVTASRALYCSHMEAVQNVVRLHKA  194 (588)
Q Consensus       160 ~~~a~~~l~~~i~~~kd~~~s~le~i~~l~~~~k~  194 (588)
                      ......+|+.++.++|+  +.++.++..++....+
T Consensus      1279 l~~~~keL~e~~~~ik~--sdi~GA~~~~r~a~~~ 1311 (1758)
T KOG0994|consen 1279 LLTTYKELREQLEKIKE--SDILGAFNSTRHAYEQ 1311 (1758)
T ss_pred             HHHHHHHHHHHHHHhhc--cCchhHHHHHHHHHHH
Confidence            45566667777766654  3344455555544443

>PF01442 Apolipoprotein: Apolipoprotein A1/A4/E domain; InterPro: IPR000074 Exchangeable apolipoproteins (apoA, apoC and apoE) have the same genomic structure and are members of a multi-gene family that probably evolved from a common ancestral gene

Probab=95.15  E-value=3.1  Score=39.59  Aligned_cols=20  Identities=20%  Similarity=0.212  Sum_probs=7.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhH
Q 007823          120 FQVELAQQIGSLCDIVDLST  139 (588)
Q Consensus       120 f~~~l~~~~~~l~~~v~~~~  139 (588)
                      +...+......+...+..+.
T Consensus        43 l~~~~~~~~~~l~~~~~~~~   62 (202)
T PF01442_consen   43 LESELEELSDRLEERLDEVK   62 (202)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            33333333333333333333

This entry includes the ApoA1, ApoA4 and ApoE proteins. ApoA1 and ApoA4 are part of the APOA1/C3/A4/A5 gene cluster on chromosome 11 []. Apolipoproteins function in lipid transport as structural components of lipoprotein particles, cofactors for enzymes and ligands for cell-surface receptors. In particular, apoA1 is the major protein component of high-density lipoproteins; apoA4 is thought to act primarily in intestinal lipid absorption; and apoE is a blood plasma protein that mediates the transport and uptake of cholesterol and lipid by way of its high affinity interaction with different cellular receptors, including the low-density lipoprotein (LDL) receptor. Recent findings with apoA1 and apoE suggest that the tertiary structures of these two members of the human exchangeable apolipoprotein gene family are related []. The three-dimensional structure of the LDL receptor-binding domain of apoE indicates that the protein forms an unusually elongated four-helix bundle that may be stabilised by a tightly packed hydrophobic core that includes leucine zipper-type interactions and by numerous salt bridges on the mostly charged surface. Basic amino acids important for LDL receptor binding are clustered into a surface patch on one long helix [].; GO: 0008289 lipid binding, 0006869 lipid transport, 0042157 lipoprotein metabolic process, 0005576 extracellular region; PDB: 1YA9_A 3S84_A 1NFN_A 1LE2_A 1B68_A 1BZ4_A 1OEG_A 2L7B_A 1LE4_A 1EA8_A ....

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]

Probab=94.35  E-value=19  Score=44.93  Aligned_cols=56  Identities=21%  Similarity=0.286  Sum_probs=34.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Q 007823            7 THQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALK   62 (588)
Q Consensus         7 ~~~k~~~~~~~~~~~~~~~~~dlk~ele~t~~~L~~T~~~L~~Te~~L~~tk~~l~   62 (588)
                      ....++..+...+..-......++..+......+.+.+..+...+..+...+..+.
T Consensus       671 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (1163)
T COG1196         671 ELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELA  726 (1163)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556666666666666666666666666666666666666666665555554444

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]

Probab=94.16  E-value=12  Score=42.12  Aligned_cols=98  Identities=19%  Similarity=0.234  Sum_probs=47.6

Q ss_pred             HHHHHHHHHHHHHHHhHhhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007823           11 QLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALKEKDFIISEQKKAENALTHQACTLRGNLE   90 (588)
Q Consensus        11 ~~~~~~~~~~~~~~~~~dlk~ele~t~~~L~~T~~~L~~Te~~L~~tk~~l~Ee~~l~~~~~~tE~~L~~~A~~L~~~l~   90 (588)
                      ++-.+..+.+........+..+...++..+++.+..+++.+..+..++..+.+....+...+.-=..+-..-..|-..+.
T Consensus        93 El~~ar~~l~e~~~~ra~~e~ei~kl~~e~~elr~~~~~~~k~~~~~re~~~~~~~~l~~leAe~~~~krr~~~le~e~~  172 (546)
T KOG0977|consen   93 ELATARKLLDETARERAKLEIEITKLREELKELRKKLEKAEKERRGAREKLDDYLSRLSELEAEINTLKRRIKALEDELK  172 (546)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence            34444444444444445555555555555555555555555555555555554444444433333333333334444444


Q ss_pred             HhhchhHHHhHhhhhhHh
Q 007823           91 KALQDNVLLFQKIGREDK  108 (588)
Q Consensus        91 ~s~~Dv~gLh~Kl~Rk~~  108 (588)
                      .-...+++|+.-|.|=++
T Consensus       173 ~Lk~en~rl~~~l~~~r~  190 (546)
T KOG0977|consen  173 RLKAENSRLREELARARK  190 (546)
T ss_pred             HHHHHhhhhHHHHHHHHH
Confidence            444555555555555444

>TIGR00606 rad50 rad50

Probab=93.21  E-value=31  Score=43.63  Aligned_cols=22  Identities=5%  Similarity=-0.029  Sum_probs=10.1

Q ss_pred             HHHHHHHHHHhhhHhHHHHHHHH
Q 007823          413 WKRTYESVNEMESKHVSSMISLT  435 (588)
Q Consensus       413 ~~~~~~ql~~l~~~q~~~ld~~v  435 (588)
                      +.++.-.+.+|+ ....+||.-+
T Consensus      1110 ~~~~~~~~~d~~-~~~~~~~~~~ 1131 (1311)
T TIGR00606      1110 MRTTELVNKDLD-IYYKTLDQAI 1131 (1311)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHH
Confidence            334444445555 4444444444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]

Probab=92.10  E-value=34  Score=41.40  Aligned_cols=177  Identities=11%  Similarity=0.146  Sum_probs=86.6

Q ss_pred             hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHhHhhhhhHh
Q 007823           29 LTTKLELTESNLDQTIKLLNNTEEQLKKCQYALKEKDFIISEQKKAENALTHQACTLRGNLEKALQDNVLLFQKIGREDK  108 (588)
Q Consensus        29 lk~ele~t~~~L~~T~~~L~~Te~~L~~tk~~l~Ee~~l~~~~~~tE~~L~~~A~~L~~~l~~s~~Dv~gLh~Kl~Rk~~  108 (588)
                      ...-+-.+-..|+.++..+...++.+..-+..++|++-++.+...+|.                         +.++.  
T Consensus       212 i~~~~~~~~~~~~~~~~~i~~~~e~i~~l~k~i~e~~e~~~~~~~~e~-------------------------~~~~l--  264 (1074)
T KOG0250|consen  212 ITESYSEIMESLDHAKELIDLKEEEIKNLKKKIKEEEEKLDNLEQLED-------------------------LKENL--  264 (1074)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH-------------------------HHHHH--
Confidence            334444455555666666666666666666666665555554433332                         22222  


Q ss_pred             hhHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 007823          109 LNADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHMEAVQNV  188 (588)
Q Consensus       109 le~~Nr~~~~~f~~~l~~~~~~l~~~v~~~~~qQ~~~l~~~~~~~~sfv~~~~~a~~~l~~~i~~~kd~~~s~le~i~~l  188 (588)
                       ...=...++.+.......+......+......+...-..+...... +..-.....+.++++...++.-+.--++++.+
T Consensus       265 -~~Lk~k~~W~~V~~~~~ql~~~~~~i~~~qek~~~l~~ki~~~~~k-~~~~r~k~teiea~i~~~~~e~~~~d~Ei~~~  342 (1074)
T KOG0250|consen  265 -EQLKAKMAWAWVNEVERQLNNQEEEIKKKQEKVDTLQEKIEEKQGK-IEEARQKLTEIEAKIGELKDEVDAQDEEIEEA  342 (1074)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhhhHHHHHHHHHHHhhhhhhHHHHHH
Confidence             2222345555666666666666666555544444333333332222 01111111333444444444433333333333


Q ss_pred             HHHHHHHhhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 007823          189 VRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVT  257 (588)
Q Consensus       189 ~~~~k~~~~~~le~lss~~~~~~~~v~~f~~sl~~e~~sv~~dlq~~L~~Qk~~l~~~~~ql~~~~~~~  257 (588)
                      +.+++.                       +..-..+++.-+.+.++.+..-+..+..+..++.......
T Consensus       343 r~~~~~-----------------------~~re~~~~~~~~~~~~n~i~~~k~~~d~l~k~I~~~~~~~  388 (1074)
T KOG0250|consen  343 RKDLDD-----------------------LRREVNDLKEEIREIENSIRKLKKEVDRLEKQIADLEKQT  388 (1074)
T ss_pred             HHHHHH-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333331                       4444455666667777777777777777776666555444

>PF07464 ApoLp-III: Apolipophorin-III precursor (apoLp-III); InterPro: IPR010009 This family consists of several insect apolipoprotein-III sequences

Probab=91.66  E-value=3.5  Score=38.96  Aligned_cols=133  Identities=10%  Similarity=0.095  Sum_probs=64.5

Q ss_pred             HhhHHHHHHHHHHHHHHHH---------HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhH
Q 007823          111 ADNRSVVENFQVELAQQIG---------SLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSH  181 (588)
Q Consensus       111 ~~Nr~~~~~f~~~l~~~~~---------~l~~~v~~~~~qQ~~~l~~~~~~~~sfv~~~~~a~~~l~~~i~~~kd~~~s~  181 (588)
                      .+-+.....|+.++...++         .|......|..+-.....+|.+.+..--...+.+..+++..|....+.+...
T Consensus         3 ~~~~e~~~~~~~~~~~~~~~~~~~Ev~~aik~~sd~~~~~l~~~~~~l~eeik~~n~~~~e~l~~~~~kl~et~~~L~k~   82 (155)
T PF07464_consen    3 QHAQEFQKEFQEQVNKLLGSQNQQEVVKAIKEQSDSVAQQLQNVSSSLQEEIKDANPEAEEALKQLKTKLEETAEKLRKA   82 (155)
T ss_dssp             HHHHHHHHHHHHHHHHHTSS--SS-SSHHHHHHHHHHHHHHHHHHHHHHHHHTT-SSTHHHHHHHHHHHHHHHHHGGGG-
T ss_pred             hHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhc
Confidence            3444555555555555552         3333333444444444444444444433456677777777777766666554


Q ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHHHhhhHHHH-HH---HHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 007823          182 MEAVQNVVRLHKACSNANLEEISAFASSNSESI-KE---FLASEAREAASIYENLQTTLSTQQGEM  243 (588)
Q Consensus       182 le~i~~l~~~~k~~~~~~le~lss~~~~~~~~v-~~---f~~sl~~e~~sv~~dlq~~L~~Qk~~l  243 (588)
                      --++..=+..+..++.+++..+-..++.....| .+   --..|..-++.++++.++.+......|
T Consensus        83 ~Pev~~qa~~l~e~lQ~~vq~l~~E~qk~~k~v~~~~~~~~e~l~~~~K~~~D~~~k~~~~~~~~l  148 (155)
T PF07464_consen   83 NPEVEKQANELQEKLQSAVQSLVQESQKLAKEVSENSEGANEKLQPAIKQAYDDAVKAAQKVQKQL  148 (155)
T ss_dssp             SHHHHHT-SSSHHHHHHHHHHHHHHHHHHHHHHHS---SS-GGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444444334444444444444444444444444 11   234455555666666666665444433

Exchangeable apolipoproteins constitute a functionally important family of proteins that play critical roles in lipid transport and lipoprotein metabolism. Apolipophorin III (apoLp-III) is a prototypical exchangeable apolipoprotein found in many insect species that functions in transport of diacylglycerol (DAG) from the fat body lipid storage depot to flight muscles in the adult life stage [].; GO: 0008289 lipid binding, 0006869 lipid transport, 0005576 extracellular region; PDB: 1EQ1_A.

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type

Probab=91.51  E-value=43  Score=41.31  Aligned_cols=36  Identities=25%  Similarity=0.398  Sum_probs=13.4

Q ss_pred             HHHHHHHHHHHHHHHhHhhhHHHHHHHHhHHHHHHH
Q 007823           11 QLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKL   46 (588)
Q Consensus        11 ~~~~~~~~~~~~~~~~~dlk~ele~t~~~L~~T~~~   46 (588)
                      ++.++...+..-...+.++...+...+..+......
T Consensus       675 ~l~~l~~~l~~l~~~l~~l~~~~~~~~~~l~~l~~~  710 (1164)
T TIGR02169       675 ELQRLRERLEGLKRELSSLQSELRRIENRLDELSQE  710 (1164)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333343333333333333333333333333333333

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent.

>PRK11637 AmiB activator; Provisional

Probab=91.08  E-value=28  Score=38.33  Aligned_cols=56  Identities=18%  Similarity=0.252  Sum_probs=22.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Q 007823            7 THQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALK   62 (588)
Q Consensus         7 ~~~k~~~~~~~~~~~~~~~~~dlk~ele~t~~~L~~T~~~L~~Te~~L~~tk~~l~   62 (588)
                      ..++++.+.+......+....++.++++.....|..+...+..++..+..+...+.
T Consensus        51 ~l~~qi~~~~~~i~~~~~~~~~~~~~l~~l~~qi~~~~~~i~~~~~~i~~~~~ei~  106 (428)
T PRK11637         51 SIQQDIAAKEKSVRQQQQQRASLLAQLKKQEEAISQASRKLRETQNTLNQLNKQID  106 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33334444443333333333333344444444444444444444444444443333

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type

Probab=89.94  E-value=57  Score=40.12  Aligned_cols=9  Identities=44%  Similarity=0.837  Sum_probs=3.3

Q ss_pred             HHHHHHHHH
Q 007823           11 QLEELQDKY   19 (588)
Q Consensus        11 ~~~~~~~~~   19 (588)
                      +++.++...
T Consensus       678 e~~~l~~~~  686 (1179)
T TIGR02168       678 EIEELEEKI  686 (1179)
T ss_pred             HHHHHHHHH
Confidence            333333333

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle.

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]

Probab=89.86  E-value=71  Score=41.13  Aligned_cols=102  Identities=13%  Similarity=-0.013  Sum_probs=62.6

Q ss_pred             HHHHhhchhHHHhHhhhhhHhhhH----hh---HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhH
Q 007823           88 NLEKALQDNVLLFQKIGREDKLNA----DN---RSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIH  160 (588)
Q Consensus        88 ~l~~s~~Dv~gLh~Kl~Rk~~le~----~N---r~~~~~f~~~l~~~~~~l~~~v~~~~~qQ~~~l~~~~~~~~sfv~~~  160 (588)
                      +=..-+.|...|+....|-..+..    .+   ...-..-+..+...+..+.+.|.....    .++.....+..|-..+
T Consensus       760 t~~rL~~e~~~l~~e~~~L~~~l~~lQt~~~~~e~s~~~~k~~~e~~i~eL~~el~~lk~----klq~~~~~~r~l~~~~  835 (1822)
T KOG4674|consen  760 TEERLSQELEKLSAEQESLQLLLDNLQTQKNELEESEMATKDKCESRIKELERELQKLKK----KLQEKSSDLRELTNSL  835 (1822)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhh
Confidence            334455667777766655543222    11   112222233344445555555544443    4677777777788888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 007823          161 EKAVIDLKKKVTASRALYCSHMEAVQNVVRLHK  193 (588)
Q Consensus       161 ~~a~~~l~~~i~~~kd~~~s~le~i~~l~~~~k  193 (588)
                      +.-..++..++..+...+.+.+.++..+.....
T Consensus       836 ~~~l~~~~~~i~~~~~~~~~~~~~l~~~~~~~~  868 (1822)
T KOG4674|consen  836 EKQLENAQNLVDELESELKSLLTSLDSVSTNIA  868 (1822)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888888888888888888888877765554

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]

Probab=89.77  E-value=57  Score=39.90  Aligned_cols=84  Identities=25%  Similarity=0.361  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHhhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007823            9 QKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALKEKDFIISEQKKAENALTHQACTLRGN   88 (588)
Q Consensus         9 ~k~~~~~~~~~~~~~~~~~dlk~ele~t~~~L~~T~~~L~~Te~~L~~tk~~l~Ee~~l~~~~~~tE~~L~~~A~~L~~~   88 (588)
                      +-+++-|..+...-+..+.++++.|..-...+.+-+..|..++.+|...+..+++..--+....+++..|..+-..++.-
T Consensus       506 esel~~L~~~~~~~~~~~e~lk~~L~~~~~~~~e~~~~l~~~k~~l~~~k~e~~~~~k~l~~~~~e~~~~~~~~~~~rqr  585 (1293)
T KOG0996|consen  506 ESELDILLSRHETGLKKVEELKGKLLASSESLKEKKTELDDLKEELPSLKQELKEKEKELPKLRKEERNLKSQLNKLRQR  585 (1293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            34666677777777888888899999999999999999999999999999999888888888888888665555555444


Q ss_pred             HHHh
Q 007823           89 LEKA   92 (588)
Q Consensus        89 l~~s   92 (588)
                      +++.
T Consensus       586 veE~  589 (1293)
T KOG0996|consen  586 VEEA  589 (1293)
T ss_pred             HHHH
Confidence            4443

>PF13949 ALIX_LYPXL_bnd: ALIX V-shaped domain binding to HIV ; PDB: 2XS1_A 2XS8_A 2R03_A 2R02_A 2OEX_B 2OEV_A 2OJQ_A 2R05_A

Probab=89.63  E-value=27  Score=36.00  Aligned_cols=44  Identities=16%  Similarity=0.234  Sum_probs=33.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhH
Q 007823          116 VVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIH  160 (588)
Q Consensus       116 ~~~~f~~~l~~~~~~l~~~v~~~~~qQ~~~l~~~~~~~~sfv~~~  160 (588)
                      -..-|..+|.. +..+...|......|...+..+......|+...
T Consensus       191 ~~~lf~~eL~k-~~~~~~~i~~~~~~Q~~ll~~i~~~~~~~~~~~  234 (296)
T PF13949_consen  191 FEALFEEELKK-FDPLQNRIQQNLSKQEELLQEIQEANEEFAQSR  234 (296)
T ss_dssp             HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            34556666666 777788888888888888888888888887554

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function

Probab=89.21  E-value=48  Score=38.21  Aligned_cols=77  Identities=21%  Similarity=0.258  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHhHhhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007823           16 QDKYDCQVRQCSDLTTKLELTESNLDQTIKLLNNTEEQLKKCQYALKEKDFIISEQKKAENALTHQACTLRGNLEKAL   93 (588)
Q Consensus        16 ~~~~~~~~~~~~dlk~ele~t~~~L~~T~~~L~~Te~~L~~tk~~l~Ee~~l~~~~~~tE~~L~~~A~~L~~~l~~s~   93 (588)
                      ...+...++....|+++++.....+....+.+......+++....+.+...-...+ ..+-.|...+..|+...++-+
T Consensus       320 ~~~~~~~~~el~~l~~~l~~l~~~i~~~~~~~~~l~~~~~q~~~e~~~~~~~~~~l-e~~~~l~~k~~~lL~d~e~ni  396 (594)
T PF05667_consen  320 EDEQEEQEQELEELQEQLDELESQIEELEAEIKMLKSSLKQLEEELEEKEAENEEL-EEELKLKKKTVELLPDAEENI  396 (594)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHH
Confidence            34455555566666666666666666666666666666666665555444433332 344555566666655554444

>PRK13895 conjugal transfer protein TraM; Provisional

Probab=88.12  E-value=22  Score=32.95  Aligned_cols=77  Identities=21%  Similarity=0.178  Sum_probs=60.2

Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHhhhhHHHHHH
Q 007823          132 CDIVDLSTCQQNEHLKHVEKLCHSLL-----GIHEKAVIDLKKKVTASRALYCSHME-AVQNVVRLHKACSNANLEEISA  205 (588)
Q Consensus       132 ~~~v~~~~~qQ~~~l~~~~~~~~sfv-----~~~~~a~~~l~~~i~~~kd~~~s~le-~i~~l~~~~k~~~~~~le~lss  205 (588)
                      +..+.+....|+.+|..+.+.+++-.     +++.++..-|...+..+|+.|+.++. ..+..++.++..++..+.++..
T Consensus        34 erLlees~kAQq~mL~~FkeelE~iasrW~~dak~KAEkiLnaaLaaSKeam~~~m~e~~~~~~~~i~~~i~~~~~e~~~  113 (144)
T PRK13895         34 DRLMQDSAKAQQEMLDQFKEELESIASRWGDDAKEKAERILNAALAASKEAMAKGMQEGAKAAAEAVRREISASLAELAA  113 (144)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34567778888888888888888766     67888888899999999999999985 5777778888777666666665


Q ss_pred             HHh
Q 007823          206 FAS  208 (588)
Q Consensus       206 ~~~  208 (588)
                      .+.
T Consensus       114 ~~~  116 (144)
T PRK13895        114 PVR  116 (144)
T ss_pred             HHH
Confidence            543

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]

Probab=87.72  E-value=98  Score=39.99  Aligned_cols=147  Identities=18%  Similarity=0.204  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH------HHHH-------HHHHHHHHHHHHHHHHhhhHHH
Q 007823          218 LASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTI------ERTK-------DIAEYTNGFLQKLLEESKSLEN  284 (588)
Q Consensus       218 ~~sl~~e~~sv~~dlq~~L~~Qk~~l~~~~~ql~~~~~~~~------~~~~-------~~s~~l~~fl~~l~~~~~~L~~  284 (588)
                      |..-.......+..++.+|..|+..+..+..++..+....-      ...+       ...+.+..-+++|+..-.+|.-
T Consensus       701 ~K~e~~tL~er~~~l~~~i~~~~q~~~~~s~eL~~a~~k~~~le~ev~~LKqE~~ll~~t~~rL~~e~~~l~~e~~~L~~  780 (1822)
T KOG4674|consen  701 TKEEVETLEERNKNLQSTISKQEQTVHTLSQELLSANEKLEKLEAELSNLKQEKLLLKETEERLSQELEKLSAEQESLQL  780 (1822)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55555556688889999999999999998888887665422      2222       3334455555556666566655


Q ss_pred             HHHHhhHHhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhh
Q 007823          285 YAVQADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGITT  364 (588)
Q Consensus       285 ~~~~~~~~~~~~L~~~~~~~e~~a~~e~~~Ll~~I~~Ll~~~~~~q~~~l~~~~~~l~~~~~~~~~~l~~~~ss~q~~~~  364 (588)
                      .+...|        .+...-++.-...++.+=++|-.|..+ +++...-+...++.+++........|..++..++....
T Consensus       781 ~l~~lQ--------t~~~~~e~s~~~~k~~~e~~i~eL~~e-l~~lk~klq~~~~~~r~l~~~~~~~l~~~~~~i~~~~~  851 (1822)
T KOG4674|consen  781 LLDNLQ--------TQKNELEESEMATKDKCESRIKELERE-LQKLKKKLQEKSSDLRELTNSLEKQLENAQNLVDELES  851 (1822)
T ss_pred             HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence            544333        233333333344455555677776655 56666668889999999888888888888887777777


Q ss_pred             hHHHHHHHH
Q 007823          365 DAKRKWQAF  373 (588)
Q Consensus       365 ~~k~~~~~~  373 (588)
                      .+..-.+..
T Consensus       852 ~~~~~~~~l  860 (1822)
T KOG4674|consen  852 ELKSLLTSL  860 (1822)
T ss_pred             HHHHHHHHH
Confidence            666555543

>PRK04863 mukB cell division protein MukB; Provisional

Probab=87.26  E-value=1e+02  Score=39.61  Aligned_cols=69  Identities=14%  Similarity=0.138  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 007823          218 LASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTI---------ERTKDIAEYTNGFLQKLLEESKSLENYA  286 (588)
Q Consensus       218 ~~sl~~e~~sv~~dlq~~L~~Qk~~l~~~~~ql~~~~~~~~---------~~~~~~s~~l~~fl~~l~~~~~~L~~~~  286 (588)
                      |..+..+....++++...+++..+.-..+++++++-..+.-         -.+...-..|.+.+.....+...++..|
T Consensus       556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~qL~~~i~~l~~~ap~W~~a~~al~~L~eq~g~~~~~~~~v~~~m  633 (1486)
T PRK04863        556 LEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYM  633 (1486)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHhhHHHHHHHHHhcchhhcCHHHHHHHH
Confidence            55555555555655555554444444445544444333322         2233444445555554444445544443

>PF04394 DUF536: Protein of unknown function, DUF536; InterPro: IPR007489 This is a C-terminal region from several bacterial proteins of unknown function that may be involved in a theta-type replication mechanism

Probab=83.05  E-value=4.1  Score=30.27  Aligned_cols=41  Identities=37%  Similarity=0.379  Sum_probs=36.7

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHhHHHH
Q 007823            3 VQLETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNLDQT   43 (588)
Q Consensus         3 ~~le~~~k~~~~~~~~~~~~~~~~~dlk~ele~t~~~L~~T   43 (588)
                      ..|+.++++|.++..++|.++++-....++++..+..|++.
T Consensus         3 ~Ql~~kd~qI~~l~kLLDQQQ~L~L~~~k~le~L~~el~E~   43 (45)
T PF04394_consen    3 EQLEEKDKQIEELQKLLDQQQQLALQDNKKLEELKAELEEY   43 (45)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            56889999999999999999999999999999988887763

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)

Probab=82.68  E-value=93  Score=35.34  Aligned_cols=13  Identities=15%  Similarity=0.289  Sum_probs=5.9

Q ss_pred             HHHHHHHHHHHHH
Q 007823          167 LKKKVTASRALYC  179 (588)
Q Consensus       167 l~~~i~~~kd~~~  179 (588)
                      |+.++..+.+.+.
T Consensus       288 LkeqLr~~qe~lq  300 (546)
T PF07888_consen  288 LKEQLRSAQEQLQ  300 (546)
T ss_pred             HHHHHHHHHHHHH
Confidence            4444444444433

This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region [].

>TIGR00606 rad50 rad50

Probab=82.18  E-value=1.5e+02  Score=37.53  Aligned_cols=15  Identities=0%  Similarity=0.102  Sum_probs=7.1

Q ss_pred             HHHHHHHHHHHHhhh
Q 007823          508 ASIKEKAQETFQQRY  522 (588)
Q Consensus       508 ~~i~~~~~~~l~~~l  522 (588)
                      ..|...+-.|+...+
T Consensus      1125 ~~~~~~~~~~~~~~~ 1139 (1311)
T TIGR00606      1125 KTLDQAIMKFHSMKM 1139 (1311)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            334444445555443

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PRK11637 AmiB activator; Provisional

Probab=81.65  E-value=88  Score=34.37  Aligned_cols=14  Identities=21%  Similarity=0.349  Sum_probs=5.4

Q ss_pred             HHHHHHHHHHHHHH
Q 007823           10 KQLEELQDKYDCQV   23 (588)
Q Consensus        10 k~~~~~~~~~~~~~   23 (588)
                      ++++.++......+
T Consensus        47 ~~l~~l~~qi~~~~   60 (428)
T PRK11637         47 DQLKSIQQDIAAKE   60 (428)
T ss_pred             HHHHHHHHHHHHHH
Confidence            33333433333333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	588
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-11

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 65.3 bits (158), Expect = 4e-11
 Identities = 76/559 (13%), Positives = 158/559 (28%), Gaps = 169/559 (30%)

Query: 6   ETHQKQLEELQDKYDCQVRQCSDLTTKLELTESNL---DQTIKLLN-NTEEQLKKCQYAL 61
           E  +   + L      + RQ S +T         L   +Q     N +  +   K + AL
Sbjct: 85  EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQAL 144

Query: 62  KEKDFIISEQKKAENALTH------------QACTLRGNLEKALQDNVLLF-QKIGREDK 108
            E        + A+N L                C L   ++  +   +  F   +   + 
Sbjct: 145 LE-------LRPAKNVLIDGVLGSGKTWVALDVC-LSYKVQCKMDFKI--FWLNLKNCNS 194

Query: 109 LNADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHV-----------------EK 151
                 +V+E  Q         L   +D +   +++H  ++                 + 
Sbjct: 195 ----PETVLEMLQ--------KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242

Query: 152 LCHSLL---GIHEKAVI---DLKKK--VTASRALYCSHMEAVQNVVRLHKACSNANL--- 200
             + LL    +         +L  K  +T +R  +    + +      H +  + ++   
Sbjct: 243 YENCLLVLLNVQNAKAWNAFNLSCKILLT-TR--FKQVTDFLSAATTTHISLDHHSMTLT 299

Query: 201 --EEISAFASSNSESIKEFLASEA---------------REAASIYENLQTTLSTQQGEM 243
             E  S          ++ L  E                R+  + ++N +     +   +
Sbjct: 300 PDEVKSLLLKYLDCRPQD-LPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358

Query: 244 ------AIFAREMRQRFQ--------VTI-----------ERTKDIAEYTNGFLQKLLEE 278
                  +   E R+ F           I               D+    N   +  L E
Sbjct: 359 IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE 418

Query: 279 SKSLEN----YAVQ-------ADENQM-KSIADFQKAYEDQTKSDTEKLIADVT-----S 321
            +  E+     ++         +E  + +SI D    Y      D++ LI         S
Sbjct: 419 KQPKESTISIPSIYLELKVKLENEYALHRSIVD---HYNIPKTFDSDDLIPPYLDQYFYS 475

Query: 322 LVSSHMR--RQTE---LVEARLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAFAMQ 376
            +  H++     E   L     +DFR   +  K+  D  A             W A    
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVFLDFR--FLEQKIRHDSTA-------------WNASGSI 520

Query: 377 AD--NDAKDGADHSSAKHCRMELLLQECVNSGESAFGHWKRTYESVNEMESKHVSSMISL 434
            +     K    +      + E L+        +A   +    E  N + SK+ + ++ +
Sbjct: 521 LNTLQQLKFYKPYICDNDPKYERLV--------NAILDFLPKIEE-NLICSKY-TDLLRI 570

Query: 435 TRNASYSNEQHDVEVDTAR 453
               +   E   +  +  +
Sbjct: 571 ----ALMAEDEAIFEEAHK 585

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	588
3s84_A	273	Apolipoprotein A-IV; four helix bundle, transport	95.99
3s84_A	273	Apolipoprotein A-IV; four helix bundle, transport	92.2
2a01_A	243	Apolipoprotein A-I; four-helix bundle, lipid trans	90.88
3o0z_A	168	RHO-associated protein kinase 1; coiled-coil, tran	88.87
3r2p_A	185	Apolipoprotein A-I; amphipathic alpha-helix, major	86.05
2a01_A	243	Apolipoprotein A-I; four-helix bundle, lipid trans	85.98
3zx6_A	341	HAMP, methyl-accepting chemotaxis protein I; signa	85.23
3ghg_A	562	Fibrinogen alpha chain; triple-stranded coiled coi	84.34

>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}

Probab=95.99  E-value=1.5  Score=43.92  Aligned_cols=34  Identities=18%  Similarity=0.304  Sum_probs=5.5

Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhhhhhhhHHHHHHHH
Q 007823          337 RLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAF  373 (588)
Q Consensus       337 ~~~~l~~~~~~~~~~l~~~~ss~q~~~~~~k~~~~~~  373 (588)
                      .+..||.........++.+   +.-+.++++++.++|
T Consensus       239 ~~e~l~~~l~~~~~~~~~~---~~~~~~d~~~~~~~~  272 (273)
T 3s84_A          239 QMEQLRQKLGPHAGDVEGH---LSFLEKDLRDKVNSF  272 (273)
T ss_dssp             HHHHHHHHHSCC-------------------------
T ss_pred             HHHHHHHHhCcchhhHHhh---hhHHHHHHHHHhhcc
Confidence            3445555544333333333   333444555555544

>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}

Probab=92.20  E-value=10  Score=37.80  Aligned_cols=10  Identities=10%  Similarity=-0.107  Sum_probs=4.1

Q ss_pred             hhHHHhHhhh
Q 007823           95 DNVLLFQKIG  104 (588)
Q Consensus        95 Dv~gLh~Kl~  104 (588)
                      |+..|+.||.
T Consensus        23 ~~eel~~~L~   32 (273)
T 3s84_A           23 ELEELRARLL   32 (273)
T ss_dssp             HHHHHHHHHG
T ss_pred             HHHHHHHhcC
Confidence            3444444443

>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*

Probab=90.88  E-value=9.5  Score=37.23  Aligned_cols=29  Identities=7%  Similarity=0.148  Sum_probs=13.6

Q ss_pred             HHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007823          233 QTTLSTQQGEMAIFAREMRQRFQVTIERT  261 (588)
Q Consensus       233 q~~L~~Qk~~l~~~~~ql~~~~~~~~~~~  261 (588)
                      .+++.+-+..|.-+..+++..+...++..
T Consensus       109 ~~~~eelr~~L~P~~eel~~~~~~~~eel  137 (243)
T 2a01_A          109 QEEMELYRQKVEPLRAELQEGARQKLHEL  137 (243)
T ss_dssp             HHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            44444444444444455544444444333

>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}

Probab=88.87  E-value=14  Score=33.97  Aligned_cols=112  Identities=17%  Similarity=0.195  Sum_probs=89.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHhHhhhHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 007823            5 LETHQKQLEELQDKYDCQVRQCSDLTTKLEL---TESNLDQTIKLLNNTEEQLKKCQYALKEKDFIISEQKKAENALTHQ   81 (588)
Q Consensus         5 le~~~k~~~~~~~~~~~~~~~~~dlk~ele~---t~~~L~~T~~~L~~Te~~L~~tk~~l~Ee~~l~~~~~~tE~~L~~~   81 (588)
                      +-..+||+++++++|.....--..++|..-.   +...++.....|.+.=..|...+..|..+-+-+.+....|..-..+
T Consensus         8 i~~LekQL~E~n~kLk~EsE~~~rlkK~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr~~r~q   87 (168)
T 3o0z_A            8 LSQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEAERRDRGH   87 (168)
T ss_dssp             --CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4456899999999999998888888875544   4566777777777888888899999999999999999999999999


Q ss_pred             HHHHHHHHHHhhchhHHHhHhhhhhH----hhhHhhHHHHHH
Q 007823           82 ACTLRGNLEKALQDNVLLFQKIGRED----KLNADNRSVVEN  119 (588)
Q Consensus        82 A~~L~~~l~~s~~Dv~gLh~Kl~Rk~----~le~~Nr~~~~~  119 (588)
                      +..++..++.   -|.+|+..|+|-.    ++...|+.+.+.
T Consensus        88 ~se~~~elq~---ri~~L~~El~~~k~~~~k~~~e~r~L~Ek  126 (168)
T 3o0z_A           88 DSEMIGDLQA---RITSLQEEVKHLKHNLEKVEGERKEAQDM  126 (168)
T ss_dssp             HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999887   6788888887654    455556555444

>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A

Probab=86.05  E-value=22  Score=33.05  Aligned_cols=102  Identities=11%  Similarity=0.209  Sum_probs=49.0

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHH--HH----HHhHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhHHHHHHHHHH
Q 007823          147 KHVEKLCHSLLGIHEKAVIDLKKKVTASR--AL----YCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLAS  220 (588)
Q Consensus       147 ~~~~~~~~sfv~~~~~a~~~l~~~i~~~k--d~----~~s~le~i~~l~~~~k~~~~~~le~lss~~~~~~~~v~~f~~s  220 (588)
                      ..+...|..||+.......+.-.++.++.  ..    +...++.+..-...++..++-..              .+|...
T Consensus        10 e~v~~~~w~Y~~~l~~~a~~~ve~l~~seL~qqL~~~l~e~~~~l~~~~~~l~~~l~p~~--------------~e~~~~   75 (185)
T 3r2p_A           10 DRVKDLATVYVDVLKDSGRDYVSQFEGSALGKQLNLKLLDNWDSVTSTFSKLREQLGPVT--------------QEFWDN   75 (185)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHSHHHHHTTCCCCTTCSCSSCHHHHHHHHHCSCC--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH--------------HHHHHH
Confidence            44556666777666665555555554432  11    11122222222233332222222              223334


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007823          221 EAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTK  262 (588)
Q Consensus       221 l~~e~~sv~~dlq~~L~~Qk~~l~~~~~ql~~~~~~~~~~~~  262 (588)
                      +..+...+-..|.+++.+-+..+.-+..+++......++..+
T Consensus        76 l~~~~~~Lr~~l~kdlee~r~~l~P~~~e~~~~~~~~~e~lr  117 (185)
T 3r2p_A           76 LEKETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEMELYR  117 (185)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence            444444455555666666666666666666666655555444

>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*

Probab=85.98  E-value=5.3  Score=39.07  Aligned_cols=19  Identities=11%  Similarity=0.048  Sum_probs=8.1

Q ss_pred             hhhhHHHHHHHHhhhHHHH
Q 007823          196 SNANLEEISAFASSNSESI  214 (588)
Q Consensus       196 ~~~~le~lss~~~~~~~~v  214 (588)
                      +.--.+++...+..+..++
T Consensus        97 l~Py~~el~~~~~~~~eel  115 (243)
T 2a01_A           97 VQPYLDDFQKKWQEEMELY  115 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhHHHH
Confidence            3334444444444444444

>3zx6_A HAMP, methyl-accepting chemotaxis protein I; signaling, HAMP domain, TSR receptor, fusion; 2.65A {Archaeoglobus fulgidus}

Probab=85.23  E-value=35  Score=34.72  Aligned_cols=19  Identities=32%  Similarity=0.545  Sum_probs=12.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 007823          316 IADVTSLVSSHMRRQTELVE  335 (588)
Q Consensus       316 l~~I~~Ll~~~~~~q~~~l~  335 (588)
                      |..|..+|.. ++.|++||+
T Consensus       148 I~~i~~~I~~-IA~QTNLLA  166 (341)
T 3zx6_A          148 IADIISVIDG-IAFQTNILA  166 (341)
T ss_dssp             HHHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHH-HHHHHHHHH
Confidence            4445554544 788999976

>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*

Probab=84.34  E-value=14  Score=39.87  Aligned_cols=74  Identities=12%  Similarity=0.145  Sum_probs=47.8

Q ss_pred             hHHHhHhhhhhHhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 007823           96 NVLLFQKIGREDKLNADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKKVTA  173 (588)
Q Consensus        96 v~gLh~Kl~Rk~~le~~Nr~~~~~f~~~l~~~~~~l~~~v~~~~~qQ~~~l~~~~~~~~sfv~~~~~a~~~l~~~i~~  173 (588)
                      +..+++.|..+-.....|.++...+..+|...+..|...|..-+    ..|+.|+..+.+-+..-.+...++..+|..
T Consensus        87 ~k~~~E~Lr~rq~q~~dNdNtynE~S~ELRRrIqyLKekVdnQl----snIrvLQsnLedq~~kIQRLEvDIdiqirs  160 (562)
T 3ghg_A           87 TTNIMEILRGDFSSANNRDNTYNRVSEDLRSRIEVLKRKVIEKV----QHIQLLQKNVRAQLVDMKRLEVDIDIKIRS  160 (562)
T ss_dssp             HHHHHHTTSSHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            34566667777777778888888888888888888888887765    344555554544444444444444444433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00