Citrus Sinensis ID: 008222
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 573 | ||||||
| 255541038 | 644 | conserved hypothetical protein [Ricinus | 0.933 | 0.830 | 0.556 | 1e-179 | |
| 225453378 | 639 | PREDICTED: GRAM domain-containing protei | 0.926 | 0.830 | 0.568 | 1e-172 | |
| 255317086 | 618 | vascular associated death 1 [Glycine max | 0.900 | 0.834 | 0.529 | 1e-161 | |
| 449432984 | 648 | PREDICTED: GRAM domain-containing protei | 0.923 | 0.816 | 0.515 | 1e-152 | |
| 356533291 | 633 | PREDICTED: GRAM domain-containing protei | 0.886 | 0.802 | 0.522 | 1e-150 | |
| 79334443 | 598 | GRAM domain family protein [Arabidopsis | 0.851 | 0.816 | 0.468 | 1e-137 | |
| 297848286 | 598 | hypothetical protein ARALYDRAFT_470058 [ | 0.848 | 0.812 | 0.463 | 1e-136 | |
| 356577522 | 803 | PREDICTED: uncharacterized protein LOC10 | 0.762 | 0.544 | 0.517 | 1e-123 | |
| 147782373 | 638 | hypothetical protein VITISV_044292 [Viti | 0.870 | 0.782 | 0.443 | 1e-115 | |
| 414590305 | 623 | TPA: hypothetical protein ZEAMMB73_97819 | 0.877 | 0.807 | 0.394 | 1e-107 |
| >gi|255541038|ref|XP_002511583.1| conserved hypothetical protein [Ricinus communis] gi|223548763|gb|EEF50252.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 323/580 (55%), Positives = 416/580 (71%), Gaps = 45/580 (7%)
Query: 1 MYLFVHFICFYSNIFGFETKVTSKFQCYVASCNSTLQYQSCFAISNEFMLQKIIPFYEVT 60
MYLF H+ICFYSNIFGFETK K+IPF EV+
Sbjct: 101 MYLFSHYICFYSNIFGFETK-------------------------------KVIPFIEVS 129
Query: 61 AVRRAKTAGIFPNAIEIFAAGKKYFFASFLSRDEAFKLITDGWLQHGSGSLASAEQQDSS 120
+V+RAKTAGIFPNAIEIFA +KYFFASFLSRDEAFKLI DGWLQ +G+ A E+Q+S
Sbjct: 130 SVKRAKTAGIFPNAIEIFAGERKYFFASFLSRDEAFKLINDGWLQCVNGARAITEEQESM 189
Query: 121 SETSSPQNGPVVIEKVNCCSADPIAKSDSIIREED--LSSDSKLPA----NVEMTPVEMQ 174
SS + ++IEKVN I + DS R+ D LS+D L A +E P +
Sbjct: 190 ISGSSSLDNGIIIEKVNSFRG--INELDSDDRDNDVSLSNDYMLSAPSAVEIERAPERLT 247
Query: 175 D--DNVEQDFEPVLDTDSLHPIKTSSWNIENSDAPKIPECYTKVAETNFQMKVEDFYSLF 232
+ DNV++D EPV D + TS WN E+++ P+I + YT+V ET F +KVE+F++ F
Sbjct: 248 EIKDNVKKDVEPV-DYITSSSSTTSIWNEEDAEPPEIRKSYTRVGETKFPIKVEEFFNFF 306
Query: 233 FSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQK 292
FSDD NFIESFH++CGDKEF+C+ W + G++R++SFQHPIK+YFGAKFGSC+E QK
Sbjct: 307 FSDDASNFIESFHQRCGDKEFRCSLWQPQEKLGHTRNVSFQHPIKIYFGAKFGSCQEKQK 366
Query: 293 FRVYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSKKTV 352
F+VYRNSHLVIETSQE++DVPYGDYFRVEGLWDV++D S EGC+L++YV+VAFSKKTV
Sbjct: 367 FQVYRNSHLVIETSQEINDVPYGDYFRVEGLWDVVKDADESNEGCLLQIYVDVAFSKKTV 426
Query: 353 WKGKIVQSTLEECRDVYAMWIGMAHDVLKQKNLEKPEEGGPAYSTVQNDDVHSERVVNTG 412
+KGKIVQSTLEECR+ YA WI MAH++LKQKNLE EEG + +QN +VH+E + +
Sbjct: 427 FKGKIVQSTLEECREAYATWINMAHELLKQKNLESREEGP---NVIQNVEVHTEVALRSV 483
Query: 413 ETSERLCNADHRIRTLPITDSLDASQSVGNLLQGNLVDSAAIASLLRESMTKCCSFVKRQ 472
ETSE+ ++ R R ++ SLD ++ VG+L+Q N ++ A+ASLLRE T+ +F++ Q
Sbjct: 484 ETSEKSSQSNDRGRIAQMSGSLDVNERVGDLVQENFTNATAVASLLREYATRFSTFLRSQ 543
Query: 473 SGVSLILVIAFAVIFLMQVSILVLLNRPQHVHMASPPDYMGAGVGVGLGQRSAESIPWLE 532
S VSLILV+AF VIFLMQVSILVLLNRPQ V +ASP +Y G+G +G RS E++ WLE
Sbjct: 544 SQVSLILVVAFVVIFLMQVSILVLLNRPQTVQVASPGEYYMGGMGSSMGDRSTEAVAWLE 603
Query: 533 RRMHYLKDEMLMVEARLERMWHEHAVLRAQLKDIEQLHKR 572
RR+H+LKDEM MVE +LER+ HEH ++AQLKD++ L R
Sbjct: 604 RRIHHLKDEMFMVEGQLERLRHEHNWIKAQLKDLDGLRNR 643
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225453378|ref|XP_002271102.1| PREDICTED: GRAM domain-containing protein 1A [Vitis vinifera] gi|297734616|emb|CBI16667.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255317086|gb|ACU01863.1| vascular associated death 1 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449432984|ref|XP_004134278.1| PREDICTED: GRAM domain-containing protein 1A-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356533291|ref|XP_003535199.1| PREDICTED: GRAM domain-containing protein 1A-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|79334443|ref|NP_171714.2| GRAM domain family protein [Arabidopsis thaliana] gi|332189265|gb|AEE27386.1| GRAM domain family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297848286|ref|XP_002892024.1| hypothetical protein ARALYDRAFT_470058 [Arabidopsis lyrata subsp. lyrata] gi|297337866|gb|EFH68283.1| hypothetical protein ARALYDRAFT_470058 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|356577522|ref|XP_003556873.1| PREDICTED: uncharacterized protein LOC100819859 [Glycine max] | Back alignment and taxonomy information |
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| >gi|147782373|emb|CAN61799.1| hypothetical protein VITISV_044292 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|414590305|tpg|DAA40876.1| TPA: hypothetical protein ZEAMMB73_978197 [Zea mays] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 573 | ||||||
| TAIR|locus:2205625 | 598 | VAD1 "VASCULAR ASSOCIATED DEAT | 0.626 | 0.600 | 0.554 | 5e-134 | |
| DICTYBASE|DDB_G0267942 | 898 | DDB_G0267942 "GRAM domain-cont | 0.539 | 0.344 | 0.275 | 4.4e-24 | |
| WB|WBGene00022593 | 616 | ZC328.3 [Caenorhabditis elegan | 0.541 | 0.503 | 0.240 | 6.9e-13 | |
| SGD|S000002734 | 1438 | YSP2 "Protein involved in prog | 0.547 | 0.218 | 0.243 | 1.7e-10 | |
| CGD|CAL0001781 | 1073 | orf19.4423 [Candida albicans ( | 0.089 | 0.047 | 0.490 | 4e-10 | |
| UNIPROTKB|Q59WE7 | 1073 | CaO19.11901 "Potential GRAM do | 0.089 | 0.047 | 0.490 | 4e-10 | |
| UNIPROTKB|Q96CP6 | 724 | GRAMD1A "GRAM domain-containin | 0.108 | 0.085 | 0.430 | 2.1e-09 | |
| MGI|MGI:105490 | 722 | Gramd1a "GRAM domain containin | 0.108 | 0.085 | 0.430 | 2.8e-08 | |
| RGD|1311022 | 723 | Gramd1a "GRAM domain containin | 0.108 | 0.085 | 0.430 | 4.5e-08 | |
| SGD|S000001122 | 1345 | YHR080C "Protein of unknown fu | 0.125 | 0.053 | 0.402 | 3.2e-07 |
| TAIR|locus:2205625 VAD1 "VASCULAR ASSOCIATED DEATH1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1012 (361.3 bits), Expect = 5.0e-134, Sum P(3) = 5.0e-134
Identities = 209/377 (55%), Positives = 261/377 (69%)
Query: 41 CFAISNEFMLQ--KIIPFYEVTAVRRAKTAGIFPNAIEIFAAGKKYFFASFLSRDEAFKL 98
CF SN F + KIIPF E++ V+RAKTAGIFPNAIEI A GKKYFFASFLSRDEAFKL
Sbjct: 110 CF-YSNIFGYETKKIIPFAEISCVKRAKTAGIFPNAIEILAGGKKYFFASFLSRDEAFKL 168
Query: 99 ITDGWLQHGSGSLASAEQQDSSSETSSPQNGPVVIEKVNCCSADPIAKSDSIIREEDL-- 156
I DGWL++GS A + + + PQ V+++ S D + D +R+E L
Sbjct: 169 IHDGWLEYGS-----AVKSEGEILVTEPQVSDGVVKRARS-SMDLANELDIPVRDETLHL 222
Query: 157 SSDSKLPANVEMTPVEMQDDNVEQDFEPVLDTDSLHPIKTSSWNIENSDAPKIPECYTKV 216
SS S LP + V +V++ EP +D + + T +W E++DAPK+ +TKV
Sbjct: 223 SSSSSLPV-ISQNGVP--PSSVQRHAEPDVDVVAAN---TFNWKPEDTDAPKLSSDFTKV 276
Query: 217 AETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPI 276
AE F + VE+F+ LFFSD V+F+ESFH+ CGDKEF+CTSW H + G++R++SFQHPI
Sbjct: 277 AEAKFSIPVEEFFRLFFSDGAVSFVESFHKNCGDKEFRCTSWQPHEKLGHTRNVSFQHPI 336
Query: 277 KVYFGAKFGSCKETQKFRVYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEG 336
K+YFGAKFG C+E+QKFR+YRNSHLVIETSQE+ DVPY DYF VEG+WD+ RD S EG
Sbjct: 337 KIYFGAKFGGCQESQKFRMYRNSHLVIETSQEISDVPYADYFTVEGVWDLKRDCRDSVEG 396
Query: 337 CILRVYVNVAFSKKTVWKGKIVQSTLEECRDVYAMWIGMAHDVLKQKNLEKPEEGGPAYS 396
CIL VYVNVAFSK+TVWKGKIVQSTLEECR+ YA WI MAH++LKQK LE +EG
Sbjct: 397 CILDVYVNVAFSKRTVWKGKIVQSTLEECREAYAHWIRMAHELLKQKKLEN-QEGNKLIE 455
Query: 397 TVQNDDVHSERVVNTGE 413
+ ERV E
Sbjct: 456 DGEPLAAREERVSECDE 472
|
|
| DICTYBASE|DDB_G0267942 DDB_G0267942 "GRAM domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00022593 ZC328.3 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| SGD|S000002734 YSP2 "Protein involved in programmed cell death" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
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| CGD|CAL0001781 orf19.4423 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q59WE7 CaO19.11901 "Potential GRAM domain protein" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q96CP6 GRAMD1A "GRAM domain-containing protein 1A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| MGI|MGI:105490 Gramd1a "GRAM domain containing 1A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1311022 Gramd1a "GRAM domain containing 1A" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| SGD|S000001122 YHR080C "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00019086001 | SubName- Full=Chromosome chr15 scaffold_19, whole genome shotgun sequence; (640 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 573 | |||
| cd13220 | 111 | cd13220, PH-GRAM_GRAMDC, GRAM domain-containing pr | 2e-32 | |
| cd13351 | 125 | cd13351, PH-GRAM1_TCB1D9_TCB1D9B, TBC1 domain fami | 5e-06 | |
| cd13217 | 100 | cd13217, PH-GRAM1_TCB1D8_TCB1D9_family, TCB1D8 and | 0.002 | |
| cd13218 | 96 | cd13218, PH-GRAM2_TCB1D8_TCB1D9_family, TCB1D8 and | 0.004 |
| >gnl|CDD|241374 cd13220, PH-GRAM_GRAMDC, GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 2e-32
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 31/110 (28%)
Query: 1 MYLFVHFICFYSNIFGFETKVTSKFQCYVASCNSTLQYQSCFAISNEFMLQKIIPFYEVT 60
+Y+ + ICFYSNIFG+ETK+ IPF ++T
Sbjct: 30 LYISENHICFYSNIFGWETKLV-------------------------------IPFKDIT 58
Query: 61 AVRRAKTAGIFPNAIEIFAAGKKYFFASFLSRDEAFKLITDGWLQHGSGS 110
++ + KTAG+FPNAI+I +KYFFASFLSRD F LIT W
Sbjct: 59 SIEKKKTAGLFPNAIQIETLTEKYFFASFLSRDSTFDLITRVWSNALLEK 108
|
The GRAMDC proteins are membrane proteins. Nothing is known about its function. Members include: GRAMDC1A, GRAMDC1B, GRAMDC1C, GRAMDC2, GRAMDC3, GRAMDC4, and GRAMDC-like proteins. All of the members, except for GRAMDC4 are included in this hierarchy. Each contains a single PH-GRAM domain at their N-terminus. The GRAM domain is found in glucosyltransferases, myotubularins and other putative membrane-associated proteins. The GRAM domain is part of a larger motif with a pleckstrin homology (PH) domain fold. Length = 111 |
| >gnl|CDD|241505 cd13351, PH-GRAM1_TCB1D9_TCB1D9B, TBC1 domain family members 9 and 9B (TBC1D9 and TBC1D9B) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 1 | Back alignment and domain information |
|---|
| >gnl|CDD|241371 cd13217, PH-GRAM1_TCB1D8_TCB1D9_family, TCB1D8 and TCB1D9 family Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 1 | Back alignment and domain information |
|---|
| >gnl|CDD|241372 cd13218, PH-GRAM2_TCB1D8_TCB1D9_family, TCB1D8 and TCB1D9 family Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 2 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 573 | |||
| KOG1032 | 590 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| PF02893 | 69 | GRAM: GRAM domain; InterPro: IPR004182 The GRAM do | 98.19 | |
| smart00568 | 61 | GRAM domain in glucosyltransferases, myotubularins | 98.06 | |
| PF10698 | 159 | DUF2505: Protein of unknown function (DUF2505); In | 97.01 | |
| KOG1032 | 590 | consensus Uncharacterized conserved protein, conta | 95.1 | |
| PF14470 | 96 | bPH_3: Bacterial PH domain | 94.23 | |
| cd08876 | 195 | START_1 Uncharacterized subgroup of the steroidoge | 92.41 | |
| KOG4347 | 671 | consensus GTPase-activating protein VRP [General f | 92.35 | |
| cd05018 | 144 | CoxG Carbon monoxide dehydrogenase subunit G (CoxG | 91.58 | |
| cd08905 | 209 | START_STARD1-like Cholesterol-binding START domain | 91.19 | |
| cd08868 | 208 | START_STARD1_3_like Cholesterol-binding START doma | 90.99 | |
| cd08904 | 204 | START_STARD6-like Lipid-binding START domain of ma | 90.96 | |
| PF14844 | 106 | PH_BEACH: PH domain associated with Beige/BEACH; P | 90.59 | |
| cd08906 | 209 | START_STARD3-like Cholesterol-binding START domain | 89.28 | |
| cd08871 | 222 | START_STARD10-like Lipid-binding START domain of m | 89.04 | |
| cd07821 | 140 | PYR_PYL_RCAR_like Pyrabactin resistance 1 (PYR1), | 88.82 | |
| PF00407 | 151 | Bet_v_1: Pathogenesis-related protein Bet v I fami | 87.83 | |
| cd00177 | 193 | START Lipid-binding START domain of mammalian STAR | 84.77 | |
| smart00234 | 206 | START in StAR and phosphatidylcholine transfer pro | 83.65 | |
| PF10805 | 106 | DUF2730: Protein of unknown function (DUF2730); In | 80.85 |
| >KOG1032 consensus Uncharacterized conserved protein, contains GRAM domain [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-45 Score=404.26 Aligned_cols=442 Identities=23% Similarity=0.317 Sum_probs=316.3
Q ss_pred CceeceeeeeeecccCceeeeecceeeeeccccCccccccccccccccceeEEEeccceeEEEEeccccccCceEEEEeC
Q 008222 1 MYLFVHFICFYSNIFGFETKVTSKFQCYVASCNSTLQYQSCFAISNEFMLQKIIPFYEVTAVRRAKTAGIFPNAIEIFAA 80 (573)
Q Consensus 1 ~~~~~~~~~f~~~~~~~~~k~~~~f~c~~~~~~~~~~~~~~~~~~~~~~~~~~Ip~~dI~~I~K~~ta~i~pNaI~I~t~ 80 (573)
||++++|||||||||||++| ++|||.+|+.|+|++||++|||||+|.|+
T Consensus 141 myis~~~icF~s~i~gw~~~-------------------------------~vIpf~eI~~ikk~~tag~fpn~i~i~t~ 189 (590)
T KOG1032|consen 141 MYISEEHICFNSNIFGWETK-------------------------------VVIPFDEITLIKKTKTAGIFPNAIEITTG 189 (590)
T ss_pred cccccceeeecccccCccce-------------------------------eEEeeeeeeeeehhhhccCCCcceEEecC
Confidence 89999999999999999999 99999999999999999999999999999
Q ss_pred CcEEEEEeecChHHHHHHHHHHHhhcCCCCCCchhhcccCCCCCCCCCCcccccccccCCCCCCCCcCcccccccCCCCC
Q 008222 81 GKKYFFASFLSRDEAFKLITDGWLQHGSGSLASAEQQDSSSETSSPQNGPVVIEKVNCCSADPIAKSDSIIREEDLSSDS 160 (573)
Q Consensus 81 ~~k~~F~SF~sRD~af~li~~~w~~~~~~~~~~~e~~~~~s~~ss~~~g~~~~e~~~~~~~~~~s~~~~~~~~~~~s~~s 160 (573)
+.+|+|+||++||+||++|.-+-+..-...........+...+ .. +....+ .+
T Consensus 190 ~~ky~f~s~~Srda~~~~~~~~~~~~~~~s~s~~~~~~~l~~~----------------~~-~~~~~~--~~-------- 242 (590)
T KOG1032|consen 190 TTKYIFVSLLSRDATYKLIKLLLHKFLDSSGSPRADSDYLSSV----------------EP-EVNDDQ--QG-------- 242 (590)
T ss_pred CCcceeeecccCccHHHHHHHhhhhcccccCCccccchhcccC----------------CC-CcCccc--cc--------
Confidence 9999999999999999977333222110000000000000000 00 000000 00
Q ss_pred CCCCCCCCCCccccCCCccccccCccCCCCCCCCCCCCCCCCCCCCCCCCccceEEEEeEEecCHHHHHhhhccCCchHH
Q 008222 161 KLPANVEMTPVEMQDDNVEQDFEPVLDTDSLHPIKTSSWNIENSDAPKIPECYTKVAETNFQMKVEDFYSLFFSDDTVNF 240 (573)
Q Consensus 161 ~~p~~v~~t~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~e~~~~P~~~~~~~~l~e~~fpisv~~lF~lLF~D~s~~F 240 (573)
+++..+.+.. .+....++..+ .... ......+....++.+..|.+++..+|+++|+|+ .|
T Consensus 243 ----~~~~~~~~s~----~~~s~~~~~~e-------~~~~---~~~~~~~~~~~v~~~~~~s~~~~~~~~~lf~d~--~~ 302 (590)
T KOG1032|consen 243 ----NVDNSQSPSA----LQNSFDSPKEE-------ELEH---DFSCSLSRLFGVLGRLPFSAPIGAFFSLLFGDN--TF 302 (590)
T ss_pred ----ccccCCCccc----cccccCCCccc-------cccc---cccccccccccccccccccccccccceeeccCc--ce
Confidence 0000000000 00000000000 0000 001112233447889999999999999999976 58
Q ss_pred HHHHHHHcCCcceEeccccccCCCCceEEEEEEeeecccCCCceeeeeEEEEEEeeeCCe-EEEEEeeecCCCCCCCeeE
Q 008222 241 IESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKFRVYRNSH-LVIETSQEVHDVPYGDYFR 319 (573)
Q Consensus 241 l~~f~~~rg~tdi~~spW~~~~~~~~tR~vsYt~PL~~p~GPKst~c~etQ~i~~~~~~~-yVVet~t~t~DVPYGDsF~ 319 (573)
+..|.+.++..++...+|.....+...|.++|++++..+.|||+|.|..+|++.+++... |.|..++.|++||||++|+
T Consensus 303 ~~~~l~~~~~~~vs~~~~~~~~~~~~~r~~~y~~~l~~~~gPk~t~~~~~~~l~~~~~~~~~~vls~t~~~~vps~~~f~ 382 (590)
T KOG1032|consen 303 FFFFLEDQDEIQVSPIPWKGPRSGILLRTLSYTKGLPAKSGPKSTDCEGTQTLHHQDLEKYFRVLSETLTPDVPSGDSFY 382 (590)
T ss_pred eeeccccccccccccccccCCCccceeEeccCCccCCCcCCCccccccceeeEEeccchhhhhhhheeccCCccccceee
Confidence 899999999999999999988888899999999999999999999999999999988654 7789999999999999999
Q ss_pred EEEEEEEEecCCCCCCceEEEEEEEEEEcccccchhhhhhchHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccccc
Q 008222 320 VEGLWDVMRDDGGSKEGCILRVYVNVAFSKKTVWKGKIVQSTLEECRDVYAMWIGMAHDVLKQKNLEKPEEGGPAYSTVQ 399 (573)
Q Consensus 320 Ve~R~~It~~~~~s~~~CrL~V~~~V~F~KsT~~Ks~IEkst~~g~ke~~~~~v~~l~e~lk~~~~k~~~~~~~~~~~~~ 399 (573)
|.+||+|.|+ +++.|+++++++|.|.|++|.+.+++.++. ..+.+++.+.++++.. +...+..+.
T Consensus 383 v~~~y~i~~~---~~~~~~l~v~~~V~~~~~sw~~~~~~~~~~-----~~k~lv~~~~~~~~~~--e~~~~~~~~----- 447 (590)
T KOG1032|consen 383 VKTRYLISRA---GSNSCKLKVSTSVEWTKSSWDVPVSEIGSN-----TLKDLVEILEKLLENG--EELAKNQEK----- 447 (590)
T ss_pred eeEEEEEEec---CCcceeecceeEEEeccCchhhcccccccc-----chhhHHHHHHHHHhcc--HHHHHhhcc-----
Confidence 9999999997 457999999999999999999999988776 4444555555555411 111111111
Q ss_pred cCCccccceeccccccccccccCCccccccccCcccccccccccccccccchHHHHHHHHHHHhhhhccccccCCceeeh
Q 008222 400 NDDVHSERVVNTGETSERLCNADHRIRTLPITDSLDASQSVGNLLQGNLVDSAAIASLLRESMTKCCSFVKRQSGVSLIL 479 (573)
Q Consensus 400 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (573)
...+.. +++ ..++.. . . +.-. -..++|.|.+-.+..+++.+...+.
T Consensus 448 ----~~~~~~------~~~---~~~v~~---~---~-----~~v~----------~~~~~~~~~~~i~~~~~~~~~~~i~ 493 (590)
T KOG1032|consen 448 ----EDELTY------EGS---PWEVEK---P---G-----GTVR----------QLSYKEVWNKPISPDKREVTLLQVV 493 (590)
T ss_pred ----cccccc------cCC---CccccC---C---C-----ceee----------eeccccccccccccccccceeEEEE
Confidence 000000 000 000100 0 0 0000 1114455777777788888888888
Q ss_pred hhHHHHHHHHhheeeeeecCCCceeecCCCcccCCCcccCCCCCCCcchHHHHHHhhchhhHHHHHHHHHHHHHHHHHHH
Q 008222 480 VIAFAVIFLMQVSILVLLNRPQHVHMASPPDYMGAGVGVGLGQRSAESIPWLERRMHYLKDEMLMVEARLERMWHEHAVL 559 (573)
Q Consensus 480 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~r~~~~~~e~~~~e~~~~~~~~~~~~~ 559 (573)
+.+...|++|+..|+.|...|-.-+.+.|.+|- .+...+..-..+..|+++|++-||+.|.+|++..+.||...+.|
T Consensus 494 ~l~~~~~~~l~~~i~~l~~~~~g~~~~~h~r~~---~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~~~~k~~~r~~~~~l 570 (590)
T KOG1032|consen 494 VLVPLKILWLLNTILFLHDVPFGSYFEVHERYR---EALDETSKVKTTLVWVSFRIEWLKDIKMEARKIKQILRNDQDLL 570 (590)
T ss_pred EEehhhhhHHHHHHhhccCCCCccceeeehhhh---hhhcccchhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 888888999999999999999999999999994 34456667788999999999999999999999999999999999
Q ss_pred HHHHhhHHHhhhc
Q 008222 560 RAQLKDIEQLHKR 572 (573)
Q Consensus 560 ~~~~~~~~~~~~~ 572 (573)
+..+..||+|.++
T Consensus 571 ~~~~~~l~~~~~~ 583 (590)
T KOG1032|consen 571 EVLFSLLEKLSQS 583 (590)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998753
|
|
| >PF02893 GRAM: GRAM domain; InterPro: IPR004182 The GRAM domain is found in glucosyltransferases, myotubularins and other putative membrane-associated proteins | Back alignment and domain information |
|---|
| >smart00568 GRAM domain in glucosyltransferases, myotubularins and other putative membrane-associated proteins | Back alignment and domain information |
|---|
| >PF10698 DUF2505: Protein of unknown function (DUF2505); InterPro: IPR019639 This entry represents proteins found Actinobacteria and Proteobacteria | Back alignment and domain information |
|---|
| >KOG1032 consensus Uncharacterized conserved protein, contains GRAM domain [Function unknown] | Back alignment and domain information |
|---|
| >PF14470 bPH_3: Bacterial PH domain | Back alignment and domain information |
|---|
| >cd08876 START_1 Uncharacterized subgroup of the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domain family | Back alignment and domain information |
|---|
| >KOG4347 consensus GTPase-activating protein VRP [General function prediction only] | Back alignment and domain information |
|---|
| >cd05018 CoxG Carbon monoxide dehydrogenase subunit G (CoxG) | Back alignment and domain information |
|---|
| >cd08905 START_STARD1-like Cholesterol-binding START domain of mammalian STARD1 and related proteins | Back alignment and domain information |
|---|
| >cd08868 START_STARD1_3_like Cholesterol-binding START domain of mammalian STARD1, -3 and related proteins | Back alignment and domain information |
|---|
| >cd08904 START_STARD6-like Lipid-binding START domain of mammalian STARD6 and related proteins | Back alignment and domain information |
|---|
| >PF14844 PH_BEACH: PH domain associated with Beige/BEACH; PDB: 1MI1_B 1T77_C | Back alignment and domain information |
|---|
| >cd08906 START_STARD3-like Cholesterol-binding START domain of mammalian STARD3 and related proteins | Back alignment and domain information |
|---|
| >cd08871 START_STARD10-like Lipid-binding START domain of mammalian STARD10 and related proteins | Back alignment and domain information |
|---|
| >cd07821 PYR_PYL_RCAR_like Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins | Back alignment and domain information |
|---|
| >PF00407 Bet_v_1: Pathogenesis-related protein Bet v I family; InterPro: IPR000916 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms | Back alignment and domain information |
|---|
| >cd00177 START Lipid-binding START domain of mammalian STARD1-STARD15 and related proteins | Back alignment and domain information |
|---|
| >smart00234 START in StAR and phosphatidylcholine transfer protein | Back alignment and domain information |
|---|
| >PF10805 DUF2730: Protein of unknown function (DUF2730); InterPro: IPR020269 This entry represents a family of various hypothetical proteins | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 573 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 3e-05
Identities = 61/534 (11%), Positives = 144/534 (26%), Gaps = 175/534 (32%)
Query: 116 QQDSSSETSSPQNGPVVIEKVNCCSADPIAKSDSIIREEDLSSDSKLPANVEMT-----P 170
+ + ++ +C + KS I+ +E++ V T
Sbjct: 13 EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKS--ILSKEEIDHIIMSKDAVSGTLRLFWT 70
Query: 171 VEMQDDNVEQDF-EPVLDTDSLHPIKTSSWNIENSDAPKIPECYTKVAETNFQMKVEDFY 229
+ + + + Q F E VL + + S E + P T+ + + + Y
Sbjct: 71 LLSKQEEMVQKFVEEVLRIN--YKFLMSPIKTE----QRQPSMMTR----MYIEQRDRLY 120
Query: 230 S--LFFSDDTVNFIESFHR-KCGDKEFKCTSW---HRHYEFGYS-------RDLSFQH-- 274
+ F+ V+ ++ + + + E + G + Q
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180
Query: 275 PIKVYFGAKFGSCKET-------QKFRVYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVM 327
K+++ +C QK + + D R+ + +
Sbjct: 181 DFKIFW-LNLKNCNSPETVLEMLQKL-----LYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234
Query: 328 R---------------DDGGSKE-------GC-IL---RVYVNVAFSKKTVWKGKIVQS- 360
R + + + C IL R + V I
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR-FKQVTDFLSAATTTHISLDH 293
Query: 361 -----TLEECRDVYAMWIGMAHDVLKQKNLEKPEE---GGP-AYSTVQNDDVHSERVVNT 411
T +E + + ++ L P E P S + +E + +
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDL-------PREVLTTNPRRLSII------AESIRDG 340
Query: 412 GETSERLCNADH-RIRTLPITDSLDASQSVGNLLQGNLVDSAAIASLLRESMTKCCSFVK 470
T + + + ++ T+ I SL+ + + R+ +
Sbjct: 341 LATWDNWKHVNCDKLTTI-IESSLNVLEP----------------AEYRKMFDRL----- 378
Query: 471 RQSGVSLILVIAFAVIFLMQVSILVLLNRPQHVHMASPPDYMGAGVGVGLGQRSAESIPW 530
+F P H+ P + S+ W
Sbjct: 379 --------------SVF------------PPSAHI--PTILL--------------SLIW 396
Query: 531 LERRMHYLKDEMLMVEAR----LERMWHE-----HAV---LRAQLKDIEQLHKR 572
+ + +++ + +E+ E ++ L+ +L++ LH+
Sbjct: 397 FD--VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS 448
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 573 | |||
| 2qim_A | 158 | PR10.2B; trans-zeatin, cytokinin, plant hormones, | 93.76 | |
| 1em2_A | 229 | MLN64 protein; beta barrel, lipid binding protein; | 92.52 | |
| 1icx_A | 155 | Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, | 92.5 | |
| 1tw0_A | 157 | Pathogenesis-related class 10 protein SPE-16; seve | 92.49 | |
| 1e09_A | 159 | PRU AV 1; allergen, major cherry allergen, pathoge | 92.16 | |
| 4a8u_A | 159 | Major pollen allergen BET V 1-J; PR-10 protein; 1. | 92.03 | |
| 3p0l_A | 221 | Steroidogenic acute regulatory protein, mitochond; | 91.25 | |
| 2flh_A | 155 | Cytokinin-specific binding protein; zeatin, pathog | 90.87 | |
| 2i9y_A | 166 | Major latex protein-like protein 28 or MLP-like pr | 90.86 | |
| 3rws_A | 168 | MTN13 protein; zeatin, cytokinin, hormone, lucerne | 90.66 | |
| 1jss_A | 224 | Stard4, cholesterol-regulated start protein 4; sta | 90.4 | |
| 2vjg_A | 154 | Major allergen DAU C 1; major carrot allergen, pat | 90.1 | |
| 2wql_A | 154 | Major allergen DAU C 1; pathogenesis-related prote | 89.16 | |
| 2pcs_A | 162 | Conserved protein; structural genomics, unknown fu | 87.84 | |
| 2r55_A | 231 | STAR-related lipid transfer protein 5; alpha and b | 87.06 | |
| 3qsz_A | 189 | STAR-related lipid transfer protein; structural ge | 86.72 | |
| 1ln1_A | 214 | PC-TP, phosphatidylcholine transfer protein; start | 85.14 | |
| 2ns9_A | 157 | Hypothetical protein APE2225; uncharacterized cons | 84.98 | |
| 2vq5_A | 201 | S-norcoclaurine synthase; lyase, S- norcoclaurine | 84.75 | |
| 2pso_A | 237 | STAR-related lipid transfer protein 13; alpha and | 84.05 | |
| 3ie5_A | 165 | Phenolic oxidative coupling protein HYP-1; hyperic | 80.5 |
| >2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A | Back alignment and structure |
|---|
Probab=93.76 E-value=3.7 Score=37.49 Aligned_cols=151 Identities=12% Similarity=0.030 Sum_probs=84.1
Q ss_pred eEEEEeEEecCHHHHHhhhccCCchHHHHHHHHHcCCcceEeccccccCCCCceEEEEEEeeecccCCCceeeeeEEEEE
Q 008222 214 TKVAETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKF 293 (573)
Q Consensus 214 ~~l~e~~fpisv~~lF~lLF~D~s~~Fl~~f~~~rg~tdi~~spW~~~~~~~~tR~vsYt~PL~~p~GPKst~c~etQ~i 293 (573)
+...+.++++|++++|.++-.|-. +.+.+++......++.-+.|. .|..|.++|. + |.+.. ..++++
T Consensus 5 ~~~~e~~i~a~a~kvw~~~~~d~~-~~~pk~~~~i~s~~i~eGdgg----~Gsir~~~~~-~-----g~~~~--~~kErl 71 (158)
T 2qim_A 5 TFQDEYTSTIAPAKLYKALVTDAD-IIIPKAVETIQSVEIVEGNGG----PGTIKKLTFI-E-----GGESK--YVLHKI 71 (158)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHH-HHHHHHCTTEEEEEEEESSSS----TTCEEEEEEE-E-----TTEEE--EEEEEE
T ss_pred EEEEEEEecCCHHHHHHHHhcCcc-chhhhHHhhCcEEEEEecCCC----CCeEEEEEEc-C-----CCcce--eEEEEE
Confidence 456678899999999997653431 355666533344445556662 2678999886 2 33322 245666
Q ss_pred EeeeCCeEEEEEeeecCCCCCCCeeEEEEEEEEEecCCCCCCceEEEEEEEEEEcccccchhhhhhchHHHHHHHHHHHH
Q 008222 294 RVYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSKKTVWKGKIVQSTLEECRDVYAMWI 373 (573)
Q Consensus 294 ~~~~~~~yVVet~t~t~DVPYGDsF~Ve~R~~It~~~~~s~~~CrL~V~~~V~F~KsT~~Ks~IEkst~~g~ke~~~~~v 373 (573)
...++....+.-+..-.|+.-..+=.....|.+.+.+ .++|.++..+ +|.+.. -........+..++.+..+.
T Consensus 72 ~~~D~~~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~---~~gs~v~wt~--~y~~~~--~~~~~~~~~~~~~~~~~~~~ 144 (158)
T 2qim_A 72 EAIDEANLGYNYSIVGGVGLPDTIEKISFETKLVEGA---NGGSIGKVTI--KIETKG--DAQPNEEEGKAAKARGDAFF 144 (158)
T ss_dssp EEEEGGGTEEEEEEEEESSCCCSEEEEEEEEEEEECS---TTCEEEEEEE--EEEEST--TCCCCHHHHHHHHHHHHHHH
T ss_pred EEEecCCCEEEEEEEeccCCccceEEEEEEEEEEecC---CCCEEEEEEE--EEEECC--CCCCCHHHHHHHHHHHHHHH
Confidence 6555433222222222232111233345567777752 3468665544 454321 11112223334578899999
Q ss_pred HHHHHHHhhcc
Q 008222 374 GMAHDVLKQKN 384 (573)
Q Consensus 374 ~~l~e~lk~~~ 384 (573)
+.+.+||.+++
T Consensus 145 k~ie~yll~~p 155 (158)
T 2qim_A 145 KAIESYLSAHP 155 (158)
T ss_dssp HHHHHHHHHCS
T ss_pred HHHHHHHHhCc
Confidence 99999998774
|
| >1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2 | Back alignment and structure |
|---|
| >1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A | Back alignment and structure |
|---|
| >1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A* | Back alignment and structure |
|---|
| >1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A | Back alignment and structure |
|---|
| >4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A | Back alignment and structure |
|---|
| >3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens} | Back alignment and structure |
|---|
| >2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A* | Back alignment and structure |
|---|
| >2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2 | Back alignment and structure |
|---|
| >2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A | Back alignment and structure |
|---|
| >2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10 | Back alignment and structure |
|---|
| >2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV} | Back alignment and structure |
|---|
| >1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A* | Back alignment and structure |
|---|
| >2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10 | Back alignment and structure |
|---|
| >2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A* | Back alignment and structure |
|---|
| >2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2 | Back alignment and structure |
|---|
| >3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 573 | |||
| d1em2a_ | 214 | Lipid transport domain of Mln64 {Human (Homo sapie | 94.37 | |
| d1e09a_ | 159 | Major tree pollen allergen {Sweet cherry (Prunus a | 94.35 | |
| d1icxa_ | 155 | Plant pathogenesis-related protein PR10 {Yellow lu | 92.97 | |
| d1fm4a_ | 159 | Major tree pollen allergen {European white birch ( | 92.93 | |
| d1xdfa1 | 157 | Plant pathogenesis-related protein PR10 {Yellow lu | 92.88 | |
| d2bk0a1 | 153 | Major allergen api g 1 {Celery (Apium graveolens) | 92.76 | |
| d1txca1 | 147 | Plant pathogenesis-related protein PR10 {Jicama (P | 92.02 | |
| d2pcsa1 | 147 | Hypothetical protein GKP20 {Geobacillus kaustophil | 90.2 | |
| d1jssa_ | 199 | Cholesterol-regulated Start protein 4 (Stard4). {M | 89.34 | |
| d1t17a_ | 148 | Hypothetical protein CC1736 {Caulobacter crescentu | 88.36 | |
| d1t77a2 | 110 | Lipopolysaccharide-responsive and beige-like ancho | 84.07 |
| >d1em2a_ d.129.3.2 (A:) Lipid transport domain of Mln64 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: TBP-like superfamily: Bet v1-like family: STAR domain domain: Lipid transport domain of Mln64 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.37 E-value=0.59 Score=41.80 Aligned_cols=152 Identities=13% Similarity=0.029 Sum_probs=80.5
Q ss_pred EEEEeEEecCHHHHHhhhccCCchHHHHHHHHHcCCcceEeccccccCC-CCceEEEEEEeeecccCCCceee-eeEEEE
Q 008222 215 KVAETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYE-FGYSRDLSFQHPIKVYFGAKFGS-CKETQK 292 (573)
Q Consensus 215 ~l~e~~fpisv~~lF~lLF~D~s~~Fl~~f~~~rg~tdi~~spW~~~~~-~~~tR~vsYt~PL~~p~GPKst~-c~etQ~ 292 (573)
.-++.++++|++++|..++.|- . .+...|-.+..+...+. +..+. +.|..-.....+|-+.+ ++..++
T Consensus 54 ~k~~~~i~~~~~~v~~~~~~d~--e-------~~~~Wd~~~~~~~ile~~~~~~~-i~~~~~~~~~~~~vs~RD~v~~~~ 123 (214)
T d1em2a_ 54 FILKTFLPCPAELVYQEVILQP--E-------RMVLWNKTVTACQILQRVEDNTL-ISYDVSAGAAGGVVSPRDFVNVRR 123 (214)
T ss_dssp EEEEEEESSCHHHHHHHTTTCH--H-------HHTTTCTTEEEEEEEEEETTTEE-EEEEEECCBTTTTBCCEEEEEEEE
T ss_pred EEEEEEEeCCHHHHHHHHHhCh--H-------HHHHHHHHHhheEEEEEcCCCce-EEEEEecccCCCCCCCcEEEEEEE
Confidence 3567899999999998666542 1 22333333333332221 12222 33332221112332332 333344
Q ss_pred EEeeeCCeEEEEEeeecCCCCCC-CeeEEE---EEEEEEecCCCCCCceEEEEEEEEEEcccccchhhhhhchHHHHHHH
Q 008222 293 FRVYRNSHLVIETSQEVHDVPYG-DYFRVE---GLWDVMRDDGGSKEGCILRVYVNVAFSKKTVWKGKIVQSTLEECRDV 368 (573)
Q Consensus 293 i~~~~~~~yVVet~t~t~DVPYG-DsF~Ve---~R~~It~~~~~s~~~CrL~V~~~V~F~KsT~~Ks~IEkst~~g~ke~ 368 (573)
+...++..+++......++.|-- ++-+++ ..|+|+..+. .+++|++...+.++..++ +=+.++.....+.+-+.
T Consensus 124 ~~~~~~~~~~~~~s~~~~~~p~~~~~vR~~~~~~~~~i~p~~~-~~~~t~vt~~~~~Dp~G~-iP~~lvn~~~~~~~~~~ 201 (214)
T d1em2a_ 124 IERRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSAS-NPRVCTFVWILNTDLKGR-LPRYLIHQSLAATMFEF 201 (214)
T ss_dssp EEECSSEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSS-CTTCEEEEEEECEECCSS-SCHHHHHHHHHHHHHHH
T ss_pred EEEcCCcEEEEEEeeccccccCCCCeEEEEEEeeeEEEEECCC-CCCeEEEEEEEEeCCCCC-CCHHHHHHHHHHhHHHH
Confidence 43333444455555555565544 443433 7899998653 346899999999998664 34555655555666665
Q ss_pred HHHHHHHHHH
Q 008222 369 YAMWIGMAHD 378 (573)
Q Consensus 369 ~~~~v~~l~e 378 (573)
++.+-+.+++
T Consensus 202 ~~~Lrk~~~k 211 (214)
T d1em2a_ 202 AFHLRQRISE 211 (214)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555444443
|
| >d1e09a_ d.129.3.1 (A:) Major tree pollen allergen {Sweet cherry (Prunus avium), pru av 1 [TaxId: 42229]} | Back information, alignment and structure |
|---|
| >d1icxa_ d.129.3.1 (A:) Plant pathogenesis-related protein PR10 {Yellow lupine (Lupinus luteus) [TaxId: 3873]} | Back information, alignment and structure |
|---|
| >d1fm4a_ d.129.3.1 (A:) Major tree pollen allergen {European white birch (Betula pendula), Bet v 1-l [TaxId: 3505]} | Back information, alignment and structure |
|---|
| >d1xdfa1 d.129.3.1 (A:1-157) Plant pathogenesis-related protein PR10 {Yellow lupine (Lupinus luteus) [TaxId: 3873]} | Back information, alignment and structure |
|---|
| >d2bk0a1 d.129.3.1 (A:2-154) Major allergen api g 1 {Celery (Apium graveolens) [TaxId: 4045]} | Back information, alignment and structure |
|---|
| >d1txca1 d.129.3.1 (A:1-147) Plant pathogenesis-related protein PR10 {Jicama (Pachyrhizus erosus), SPE-16 [TaxId: 109171]} | Back information, alignment and structure |
|---|
| >d2pcsa1 d.129.3.10 (A:1-147) Hypothetical protein GKP20 {Geobacillus kaustophilus [TaxId: 1462]} | Back information, alignment and structure |
|---|
| >d1jssa_ d.129.3.2 (A:) Cholesterol-regulated Start protein 4 (Stard4). {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1t17a_ d.129.3.6 (A:) Hypothetical protein CC1736 {Caulobacter crescentus [TaxId: 155892]} | Back information, alignment and structure |
|---|
| >d1t77a2 b.55.1.6 (A:2076-2185) Lipopolysaccharide-responsive and beige-like anchor protein LRBA {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|