Citrus Sinensis ID: 008353
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 569 | ||||||
| 225450265 | 559 | PREDICTED: uncharacterized protein LOC10 | 0.963 | 0.980 | 0.709 | 0.0 | |
| 255565176 | 551 | conserved hypothetical protein [Ricinus | 0.956 | 0.987 | 0.685 | 0.0 | |
| 224121106 | 587 | predicted protein [Populus trichocarpa] | 0.971 | 0.942 | 0.650 | 0.0 | |
| 224143636 | 546 | predicted protein [Populus trichocarpa] | 0.934 | 0.974 | 0.683 | 0.0 | |
| 18406495 | 553 | uncharacterized protein [Arabidopsis tha | 0.961 | 0.989 | 0.626 | 0.0 | |
| 30689674 | 583 | uncharacterized protein [Arabidopsis tha | 0.961 | 0.938 | 0.595 | 0.0 | |
| 356560867 | 556 | PREDICTED: uncharacterized protein LOC10 | 0.963 | 0.985 | 0.616 | 0.0 | |
| 357451131 | 561 | hypothetical protein MTR_2g062430 [Medic | 0.936 | 0.950 | 0.598 | 0.0 | |
| 356557046 | 548 | PREDICTED: uncharacterized protein LOC10 | 0.938 | 0.974 | 0.603 | 0.0 | |
| 297824437 | 564 | hypothetical protein ARALYDRAFT_483550 [ | 0.964 | 0.973 | 0.601 | 0.0 |
| >gi|225450265|ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/575 (70%), Positives = 474/575 (82%), Gaps = 27/575 (4%)
Query: 4 NCLNNCSTPATNIAKKKSKGFPIETTFKLPAPIPTWPPGEGFGSGTIDLGG-LQVRQITS 62
NCL S A++++KK+ K IET+FKLPAP+PTWPPGEGF GTIDLGG L+V QI+S
Sbjct: 3 NCLTVSS--ASDVSKKR-KSLAIETSFKLPAPMPTWPPGEGFAGGTIDLGGGLEVCQISS 59
Query: 63 FKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYAQPNNTPLFGWVLAAKDSS---- 118
F K+WATHEGGPDN G TFFEPS + P F MLGCY+QPN PLFGWVLA KD++
Sbjct: 60 FTKVWATHEGGPDNLGATFFEPSPM--PEEFCMLGCYSQPNKKPLFGWVLAGKDNTNNPL 117
Query: 119 GLSLKKPVDYTLVWSSESLKIKQDGVAYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCV 178
G +LKKP+DYTLVWSSESLKIKQDG YVWLPTPPDGYK VGH ITN PEKP+LDK+RCV
Sbjct: 118 GGALKKPIDYTLVWSSESLKIKQDGNGYVWLPTPPDGYKAVGHVITNLPEKPSLDKIRCV 177
Query: 179 RSDFTDQCQTDTWIWG----ANKYGLNVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPS 234
RSD TD C+ DTWIWG AN G NV+ ++PS RG + + VSVGTF AQ G +
Sbjct: 178 RSDLTDLCEADTWIWGLDKVANANGFNVYDLQPSDRGAQALAVSVGTFVAQNGG----AA 233
Query: 235 TSTTLACLKNIMAKSNLSSYNYMPNLQQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNG 294
+S +LACLKNI SNL + MPNL Q++ +VQAYSP++YLHPDE+YLPSSVSW+F NG
Sbjct: 234 SSLSLACLKNI--SSNLYA---MPNLAQVDALVQAYSPWVYLHPDEQYLPSSVSWFFQNG 288
Query: 295 ALLYRKGEESKPIPIEPMGSNLPQGGSNDGAYWLDLPVNDKAKERVKKGDLQNSQVYLHI 354
ALLY++GEESKP+ I+P GSNLPQGGSNDGAYWLDLPV+ KAKE VKKGDLQ+S Y+HI
Sbjct: 289 ALLYQQGEESKPVNIDPTGSNLPQGGSNDGAYWLDLPVDAKAKETVKKGDLQDSMTYMHI 348
Query: 355 KPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELW 414
KPMLGAT+TDIAIWIFYPFNGPARAKV+ I NI LGKIGEHVGDWEHVTLR+SNFNG+L
Sbjct: 349 KPMLGATFTDIAIWIFYPFNGPARAKVELI-NISLGKIGEHVGDWEHVTLRVSNFNGKLM 407
Query: 415 RVFLSQHSGGTWVNASELEFQSGNKPVTYASLNGHAMYAKPGLVLQGSGGIGIRNDTAKS 474
VF S+HS GTWVNASELEFQ+GNK V+YASL+GHA Y KPGLVLQGSG +GIRNDTAKS
Sbjct: 408 NVFFSEHSSGTWVNASELEFQNGNKVVSYASLHGHAFYPKPGLVLQGSGAMGIRNDTAKS 467
Query: 475 RMLLDTGRHFSIVAADYLSGSASVITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKL 534
+M++DTG + +VAA+YL S + EPPWLNY+R+WGPKISYD++ EIKE+EKLLPGKL
Sbjct: 468 KMVMDTGTRYIVVAAEYL---GSAVVEPPWLNYYRKWGPKISYDLAAEIKEVEKLLPGKL 524
Query: 535 KPAFQKFVNSLPNEVLGEEGPTGPKAKSNWNGDEV 569
K AF+K V SLPNE+LGEEGPTGPK K NW+GDEV
Sbjct: 525 KSAFEKLVKSLPNEILGEEGPTGPKMKKNWDGDEV 559
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255565176|ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis] gi|223537142|gb|EEF38775.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224121106|ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|222872727|gb|EEF09858.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224143636|ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|222866459|gb|EEF03590.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|18406495|ref|NP_030964.1| uncharacterized protein [Arabidopsis thaliana] gi|15293039|gb|AAK93630.1| unknown protein [Arabidopsis thaliana] gi|20197184|gb|AAC16076.2| expressed protein [Arabidopsis thaliana] gi|22136978|gb|AAM91718.1| unknown protein [Arabidopsis thaliana] gi|330255303|gb|AEC10397.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|30689674|ref|NP_850414.1| uncharacterized protein [Arabidopsis thaliana] gi|330255304|gb|AEC10398.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|356560867|ref|XP_003548708.1| PREDICTED: uncharacterized protein LOC100808166 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357451131|ref|XP_003595842.1| hypothetical protein MTR_2g062430 [Medicago truncatula] gi|124360092|gb|ABN08108.1| Protein of unknown function DUF946, plant [Medicago truncatula] gi|355484890|gb|AES66093.1| hypothetical protein MTR_2g062430 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356557046|ref|XP_003546829.1| PREDICTED: uncharacterized protein LOC100806731 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297824437|ref|XP_002880101.1| hypothetical protein ARALYDRAFT_483550 [Arabidopsis lyrata subsp. lyrata] gi|297325940|gb|EFH56360.1| hypothetical protein ARALYDRAFT_483550 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 569 | ||||||
| TAIR|locus:2050610 | 583 | AT2G44260 "AT2G44260" [Arabido | 0.894 | 0.873 | 0.650 | 9.2e-202 | |
| TAIR|locus:2050559 | 542 | AT2G44230 "AT2G44230" [Arabido | 0.934 | 0.981 | 0.583 | 1.9e-179 | |
| TAIR|locus:2078728 | 583 | AT3G01870 "AT3G01870" [Arabido | 0.961 | 0.938 | 0.531 | 3.9e-163 | |
| TAIR|locus:2078723 | 592 | AT3G01880 "AT3G01880" [Arabido | 0.927 | 0.891 | 0.535 | 4.6e-160 | |
| TAIR|locus:2103020 | 567 | AT3G04350 "AT3G04350" [Arabido | 0.922 | 0.925 | 0.473 | 4.4e-139 | |
| TAIR|locus:2146188 | 553 | AT5G18490 "AT5G18490" [Arabido | 0.908 | 0.934 | 0.468 | 1.1e-137 | |
| TAIR|locus:2172462 | 566 | AT5G43950 "AT5G43950" [Arabido | 0.926 | 0.931 | 0.473 | 3.2e-136 | |
| TAIR|locus:2020210 | 572 | AT1G04090 "AT1G04090" [Arabido | 0.931 | 0.926 | 0.480 | 2e-134 | |
| CGD|CAL0001572 | 442 | orf19.1800 [Candida albicans ( | 0.319 | 0.411 | 0.277 | 1.3e-07 | |
| UNIPROTKB|Q59P04 | 442 | VPS62 "Potential vacuolar targ | 0.319 | 0.411 | 0.277 | 1.3e-07 |
| TAIR|locus:2050610 AT2G44260 "AT2G44260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1886 (669.0 bits), Expect = 9.2e-202, Sum P(2) = 9.2e-202
Identities = 345/530 (65%), Positives = 420/530 (79%)
Query: 42 GEGFGSGTIDLGG-LQVRQITSFKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYA 100
G+GF GTIDLGG L+V Q+++F K+W+T+EGGPDN G TFFEPS+I P GF +LG YA
Sbjct: 71 GDGFAKGTIDLGGGLEVSQVSTFNKVWSTYEGGPDNLGATFFEPSSI--PSGFSILGYYA 128
Query: 101 QPNNTPLFGWVLAAKDSSGLSLKKPVDYTLVWSSESLKIKQDGVAYVWLPTPPDGYKNVG 160
QPNN LFGWVL A+D S +LK PVDYTLV ++ESLKIKQDG Y W P PPDGY+ VG
Sbjct: 129 QPNNRNLFGWVLTARDLSSNTLKPPVDYTLVGNTESLKIKQDGTGYFWQPVPPDGYQAVG 188
Query: 161 HAITNFPEKPALDKMRCVRSDFTDQCQTDTWIWGANKYGLNVFSVRPSVRGTEEMGVSVG 220
+TN+ +KP LDK+RC+RSD T+QC+ DTWIWG N G+N+ +++P+ RGT+ GV VG
Sbjct: 189 LIVTNYSQKPPLDKLRCIRSDLTEQCEADTWIWGTN--GVNISNLKPTTRGTQATGVYVG 246
Query: 221 TFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPNLQQIETMVQAYSPYIYLHPDE 280
TF Q N + PS L+CLKN K + S+ MPN QIE + Q +SP IY HPDE
Sbjct: 247 TFTWQTQ-NSSPPS----LSCLKN--TKLDFST---MPNGSQIEELFQTFSPCIYFHPDE 296
Query: 281 KYLPSSVSWYFDNGALLYRKGEESKPIPIEPMGSNLPQGGSNDGAYWLDLPVNDKAKERV 340
+YLPSSV+WYF+NGALLY+KGEESKPIPIE GSNLPQGGSNDG+YWLDLP++ KERV
Sbjct: 297 EYLPSSVTWYFNNGALLYKKGEESKPIPIESNGSNLPQGGSNDGSYWLDLPIDKNGKERV 356
Query: 341 KKGDLQNSQVYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWE 400
KKGDLQ+++VYLHIKPMLGAT+TDI+IWIFYPFNGPA+AKVKF+N +PLG+IGEH+GDWE
Sbjct: 357 KKGDLQSTKVYLHIKPMLGATFTDISIWIFYPFNGPAKAKVKFVN-LPLGRIGEHIGDWE 415
Query: 401 HVTLRISNFNGELWRVFLSQHSGGTWVNASELEFQSG--NKPVTYASLNGHAMYAKPGLV 458
H TLRISNF GELWRVFLSQHSGG W++A +LEFQ G NK V YASL+GHAMY KPGLV
Sbjct: 416 HTTLRISNFTGELWRVFLSQHSGGIWIDACDLEFQDGGNNKFVAYASLHGHAMYPKPGLV 475
Query: 459 LQGSGGIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSASVITEPPWLNYFREWGPKISYD 518
LQG G+GIRNDT K + +LDTG + ++AA+Y G + EPPW+ YFR+WGPKI Y+
Sbjct: 476 LQGDDGVGIRNDTGKGKKVLDTGLGYEVIAAEYDGGG---VVEPPWVKYFRKWGPKIDYN 532
Query: 519 ISHEIKEIEKLLPGKLKPAFQKFVNSLPNEVLGEEGPTGPKAKSNWNGDE 568
+ E+K +E++LPG LK AF KFV +P+EV GE+GPTGPK KSNW GDE
Sbjct: 533 VDDEVKSVERILPGLLKKAFVKFVKKIPDEVYGEDGPTGPKLKSNWAGDE 582
|
|
| TAIR|locus:2050559 AT2G44230 "AT2G44230" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2078728 AT3G01870 "AT3G01870" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2078723 AT3G01880 "AT3G01880" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2103020 AT3G04350 "AT3G04350" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2146188 AT5G18490 "AT5G18490" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2172462 AT5G43950 "AT5G43950" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020210 AT1G04090 "AT1G04090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0001572 orf19.1800 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q59P04 VPS62 "Potential vacuolar targeting protein" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| gw1.148.143.1 | hypothetical protein (586 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 569 | |||
| pfam06101 | 537 | pfam06101, DUF946, Plant protein of unknown functi | 0.0 |
| >gnl|CDD|218898 pfam06101, DUF946, Plant protein of unknown function (DUF946) | Back alignment and domain information |
|---|
Score = 874 bits (2260), Expect = 0.0
Identities = 343/552 (62%), Positives = 417/552 (75%), Gaps = 23/552 (4%)
Query: 25 PIETTFKLPAPIPTWPPGEGFGSGTIDLGGLQVRQITSFKKIWATHEGGPDNAGTTFFEP 84
P TTF LP+P+P+WP G GF G IDLG L+V QI++F+K+W T+EGGPDN G TF+EP
Sbjct: 1 PEPTTFSLPSPLPSWPQGGGFAKGRIDLGELEVSQISTFEKVWRTYEGGPDNKGATFYEP 60
Query: 85 STIDIPPGFFMLGCYAQPNNTPLFGWVLAAKDSSG----LSLKKPVDYTLVWSSESLKIK 140
+ IP GF LG Y QPNN PLFGWVL A+D SG +LK PVDYTLVW+++SLK+
Sbjct: 61 T--GIPEGFSCLGHYCQPNNRPLFGWVLVARDVSGSTTNPALKPPVDYTLVWNTDSLKVN 118
Query: 141 QDGV-AYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCVRSDFTDQCQTDTWIWGANKYG 199
QD Y WLP PPDGY+ VG +T P+KP+LD++RCVRSD TDQC+TDTWIWG N
Sbjct: 119 QDSGCGYFWLPVPPDGYRAVGLVVTTSPDKPSLDEVRCVRSDLTDQCETDTWIWGTNS-P 177
Query: 200 LNVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPN 259
NV+S RP RG E GVSVGTF Q S +ACLKN+ S+LS+ MPN
Sbjct: 178 FNVWSTRPCNRGMEAKGVSVGTFFCQ---TGGLNSEPPPIACLKNL--DSDLSA---MPN 229
Query: 260 LQQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYRKGEESKPIPIEPMGSNLPQG 319
L QI ++Q Y P IY HPDE+YLPSSVSW+F NGALLY+KGEES P+PI+P GSNLPQG
Sbjct: 230 LDQIHALIQHYGPTIYFHPDEEYLPSSVSWFFKNGALLYKKGEESNPVPIDPNGSNLPQG 289
Query: 320 GSNDGAYWLDLPVNDKAKERVKKGDLQNSQVYLHIKPMLGATYTDIAIWIFYPFNGPARA 379
GSNDG YW+DLP +D A+ERVKKG+L+++++Y+H+KP LG T+TDIA+WIF PFNGPA
Sbjct: 290 GSNDGEYWIDLPDDDAARERVKKGNLESAELYVHVKPALGGTFTDIAMWIFCPFNGPATL 349
Query: 380 KVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQHSGGTWVNASELEF-QSGN 438
KV FI +IPLGKIGEHVGDWEH TLRISNF+GELW V+ SQHSGG WV+AS+LEF Q GN
Sbjct: 350 KVGFI-SIPLGKIGEHVGDWEHFTLRISNFSGELWSVYFSQHSGGEWVDASDLEFIQGGN 408
Query: 439 KPVTYASLNGHAMYAKPGLVLQGSG--GIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSA 496
KPV Y+SL+GHA + PGL LQGS GIGIRND AKS +++D+ + IVAA+YL G
Sbjct: 409 KPVVYSSLHGHASFPHPGLYLQGSSKLGIGIRNDAAKSDLVVDSSTRYEIVAAEYL-GGG 467
Query: 497 SVITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKLKPAFQKFVNSLPNEVLGEEGPT 556
V EPPWLNY REWGP I YD E++++EK+LPG L+ +F+ +N LP E+ GEEGPT
Sbjct: 468 VV--EPPWLNYMREWGPTIVYDSRSELEKVEKILPGFLRKSFENIINKLPVELYGEEGPT 525
Query: 557 GPKAKSNWNGDE 568
GPK K+NW GDE
Sbjct: 526 GPKEKNNWEGDE 537
|
This family consists of several hypothetical proteins from Arabidopsis thaliana and Oryza sativa. The function of this family is unknown. Length = 537 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 569 | |||
| PF06101 | 535 | DUF946: Plant protein of unknown function (DUF946) | 100.0 | |
| PF06101 | 535 | DUF946: Plant protein of unknown function (DUF946) | 98.91 | |
| PF05630 | 206 | NPP1: Necrosis inducing protein (NPP1); InterPro: | 95.9 |
| >PF06101 DUF946: Plant protein of unknown function (DUF946); InterPro: IPR009291 This family consists of several hypothetical proteins, which includes vacuolar protein sorting protein 62 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-169 Score=1363.27 Aligned_cols=527 Identities=57% Similarity=1.058 Sum_probs=504.0
Q ss_pred CcccccCCCCCCCCCCCCCceeeeeecCCeEEEEccccceeeecccCCCCCCceEEeeecCCCCCCceEEccccccCCCC
Q 008353 26 IETTFKLPAPIPTWPPGEGFGSGTIDLGGLQVRQITSFKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYAQPNNT 105 (569)
Q Consensus 26 ~~~~f~~p~~~p~~p~g~~Fa~g~i~lg~L~v~~~t~F~rVW~~~~g~~~~~~~SfWrP~~~~~P~Gy~~LGdy~~~~~~ 105 (569)
+|++|+||+|||+||||+|||+|+|+||+|+|++|++|+|||.+.+++++++++|||||++ +|+||++||||||+|++
T Consensus 1 ~~~~f~~p~~~~~~p~g~~fa~g~I~lG~L~V~~~s~F~rVW~~~~g~~~~~~vSfwRP~~--vP~Gf~~LGdyaqpn~~ 78 (535)
T PF06101_consen 1 IPTPFSLPAPLPSWPQGGGFASGRIDLGELEVAQVSTFERVWWDKGGGGSRKGVSFWRPVG--VPPGFVILGDYAQPNNK 78 (535)
T ss_pred CCccccCCCCCCCCCCCCCceeeeEecCCEEEEEeccceEEEECCCCCCCCCceEEeccCC--CCCCceEEeeEeCCCCC
Confidence 5899999999999999999999999999999999999999998777778899999999998 79999999999999999
Q ss_pred CCCccEEEEECCC----CCCccCCCCceEEEecCCcccccC-CceEEEeecCCCCceeecEEEeCCCCCCCCCeEEEecc
Q 008353 106 PLFGWVLAAKDSS----GLSLKKPVDYTLVWSSESLKIKQD-GVAYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCVRS 180 (569)
Q Consensus 106 Pp~~~Vlvvrd~~----~~~l~~P~~f~lVW~d~~sg~k~~-~~~s~W~PvpP~GYvALG~Vvt~~~~kP~ld~vrCVR~ 180 (569)
|++++|||+++.+ .++|++|++|+|||++.+++++++ .++|||+|+||+||+|||||||+++++|++++|||||+
T Consensus 79 P~~G~VLva~d~~~~~~~p~l~~Pv~f~lVW~~~~~~~~~~~~~~sfW~PvaP~GYvALG~Vvt~~~~~P~ld~vrCVR~ 158 (535)
T PF06101_consen 79 PPNGFVLVARDVSGSPSNPALAKPVDFTLVWSDSGSGGKQDSEDVSFWLPVAPPGYVALGCVVTTGPEKPSLDSVRCVRS 158 (535)
T ss_pred CCcceEEEEecCCcccCCcccCCCCcceEEEecCCCCcccCCccEEEEecCCCCCceEEEEEEeCCCCCCCCceEEEEch
Confidence 9999999999864 479999999999999998887654 37999999999999999999999999999999999999
Q ss_pred cccccCCCccceeecCCCCeEEEeecCCCCCccccccceeeEEEeeCCCCCCCCCccccceeecccccccCCCCCCCCCh
Q 008353 181 DFTDQCQTDTWIWGANKYGLNVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPNL 260 (569)
Q Consensus 181 DLv~~~~~~~~iW~d~~s~~svW~v~p~~rg~~~~gv~~gTF~~~~~~~~~~p~~~~~~~cLkn~~~~~~~~~~~~~P~~ 260 (569)
|||++|+..++||++.+ |+||++||++|||+++||++|||+|+++..++ .+..|+||||+++ +|++||++
T Consensus 159 DLv~~~~~~~~Iw~~~~--f~vw~vrP~~rG~~~~Gv~vGTF~~~~~~~~~---~~~~i~cLkn~~~-----~l~~mp~~ 228 (535)
T PF06101_consen 159 DLVDQCEFSESIWDSSS--FSVWSVRPCDRGMWAKGVSVGTFFCQSGWSSS---EPPPIACLKNLDS-----SLSAMPNL 228 (535)
T ss_pred HhcccccccceEEccCC--eEEEecCcccceeecCCCceeeEEeecCCCCC---cccChhHhhcCCc-----ccccCCch
Confidence 99999999999998444 99999999999999999999999999988632 3569999999999 89999999
Q ss_pred hhHHHHHHHcCCeEEeCCCCCcCCCCHHHHHhcCeeeeecCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCcccccCcc
Q 008353 261 QQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYRKGEESKPIPIEPMGSNLPQGGSNDGAYWLDLPVNDKAKERV 340 (569)
Q Consensus 261 ~qi~~lv~~yAPlv~Lh~~E~y~PSsv~~f~~n~~l~~~~g~~~~p~~i~~~gsnLp~g~~nd~~~wldlp~d~~~~~~~ 340 (569)
+||++||++|||+|||||||+|+||||+|||+|++++|++++.+.+.+|+.+|+|||++++||+.||||||.+..+++.+
T Consensus 229 ~qi~~li~~YaP~vylhpeE~YlPssV~~Ff~Ng~l~~~~g~~~~~~~i~~~gsnLp~~~~nd~~~~ldl~~~~~~~~~v 308 (535)
T PF06101_consen 229 DQIHALIQKYAPLVYLHPEERYLPSSVEWFFENGALLYKKGNESNPKPIDPNGSNLPQGGTNDGDYWLDLPDDDKNKESV 308 (535)
T ss_pred HHHHHHHHhhCceEEecCccccCCccHHHHhhCceEEEcCCCccCCeecccccccCCCCCCCCccccccCcccccccccc
Confidence 99999999999999999999999999999999999999999998778999999999999999999999999998888999
Q ss_pred ccCccCCccEEEEEEecCCCcEEEEEEEEEccCCCCccceeeeeeccCCCCccCcccceeeeEEEEeCCCCeEeEEEeec
Q 008353 341 KKGDLQNSQVYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQ 420 (569)
Q Consensus 341 ~~G~~~~a~~y~~v~p~~g~~~~di~yw~FY~fNg~~~~~~g~~~~~~~~~~G~HvGDWEh~tvr~~n~~G~p~~v~~S~ 420 (569)
++|+|++|++|+||||++|+++|||+||+||||||++++|||++ ++++++||+|||||||+||||+|++|+|++|||||
T Consensus 309 k~G~l~~a~~yv~Vkp~~Ggt~tDi~~w~FypfNg~~~~~vg~~-~~~~~~~G~HvGDWEH~tvR~~n~~g~~~~v~~S~ 387 (535)
T PF06101_consen 309 KKGNLESAPAYVHVKPDKGGTFTDIFYWYFYPFNGPARLKVGPI-NIPLGKFGNHVGDWEHVTVRFSNFDGEPQAVYFSQ 387 (535)
T ss_pred ccCCcCCCcEEEEEEEcCCCcEEEEEEEEEecCCCCccccccee-eecccccccccccceeEEEEEECCCCcEEEEEeee
Confidence 99999999999999999999999999999999999999999998 99999999999999999999999999999999999
Q ss_pred cCCCeeeecCcccee-cCCccEEEEccCCccCCCCCccccCCCC--CCcccccccCCCceecCCCceeEEEeeccCCCCC
Q 008353 421 HSGGTWVNASELEFQ-SGNKPVTYASLNGHAMYAKPGLVLQGSG--GIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSAS 497 (569)
Q Consensus 421 H~~G~~~~~~~le~~-~g~rPvvYsa~gsHa~Yp~~G~~~~~~~--~~g~~~dt~~~~~~wD~~~~~~~~~~~yl~g~~~ 497 (569)
|++|+||+++++|+. .++|||||||+||||+||+||+|+|+.. ++||++|+++++.+||++++|++|+++|+ + +
T Consensus 388 H~~G~~~~~~~le~~~~~~rPvvYsa~g~Ha~y~~~G~~~~g~~~l~~gi~~D~~~~~~~~D~~~~y~~v~~~y~-~--~ 464 (535)
T PF06101_consen 388 HSGGQWYDYSDLEFIQDGNRPVVYSARGSHANYPSPGTHLQGSPKLGIGIRNDTTDSGPLWDSSLNYEVVAAEYL-G--S 464 (535)
T ss_pred cCCCceechhhhccccCCCceEEEecCCcccCCCCCcccccCccccCccceecccCCcceEcCCcceEEEecccc-C--C
Confidence 999999999999984 5999999999999999999999999987 99999999999999999999999999998 7 5
Q ss_pred CCCCCCccccccccCCCcCCCChHHHHHHHHhCCCCchhHHHHhhhcCCccccCCcCCCCCcccCCCCCCC
Q 008353 498 VITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKLKPAFQKFVNSLPNEVLGEEGPTGPKAKSNWNGDE 568 (569)
Q Consensus 498 ~~~~~~Wl~f~G~WG~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~p~e~~~~~GPtGPk~K~~w~gde 568 (569)
.+.+|+||+|+|+|||+++||++.|+++|+++||++||+++|+|+++||.|+++||||||||+|+||.|||
T Consensus 465 ~~~ep~WL~y~g~WG~~i~y~~~~e~~~~~~~lp~~~~~~~~~~~~~~p~e~~~eegptgpk~k~~w~gde 535 (535)
T PF06101_consen 465 GVVEPPWLNYMGRWGPKIVYDSRSEIDKVEKFLPGKLRFSFENIFNKLPNELYGEEGPTGPKEKNNWEGDE 535 (535)
T ss_pred CCcCcchhhcccccCCcccCchHHHHHHHHHhChHHHHHHHHHHHHhCcHHhccCCCCCCcccccCCCCCC
Confidence 56799999999999999999999999999999999999999999999999999999999999999999998
|
The function of this family is unknown. |
| >PF06101 DUF946: Plant protein of unknown function (DUF946); InterPro: IPR009291 This family consists of several hypothetical proteins, which includes vacuolar protein sorting protein 62 | Back alignment and domain information |
|---|
| >PF05630 NPP1: Necrosis inducing protein (NPP1); InterPro: IPR008701 This family consists of several NPP1-like necrosis inducing proteins from oomycetes, fungi and bacteria | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 569 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 3e-06
Identities = 64/445 (14%), Positives = 129/445 (28%), Gaps = 118/445 (26%)
Query: 155 GYKNVGHA-----ITNFPEKPALDKMRCVRSDF---------TDQCQTDTWIWGANKYGL 200
YK++ + NF K D + + S T W
Sbjct: 17 QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE 76
Query: 201 NVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPNL 260
+ V+ V + + + I PS T + Y+
Sbjct: 77 EM--VQKFVEEVLRI--NYKFLMSPIKTEQRQPSMMTRM----------------YIEQR 116
Query: 261 QQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYRKG-EESKPIP---IEPMG--- 313
++ Q ++ Y + YL L R+ E +P I+ +
Sbjct: 117 DRLYNDNQVFAKYNVSRL-QPYL-----------KL--RQALLELRPAKNVLIDGVLGSG 162
Query: 314 ----------SNLPQGGSNDGAYWLDLPVNDKAKERVKKGDLQNSQVYLHIKPMLGATYT 363
S Q + +WL+L + + ++ LQ + I P + +
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM--LQK--LLYQIDPNWTS-RS 217
Query: 364 DIAIWIFYPFNGPARAKVKFINNIPLGK---IGEHVGDWEHVTLRISNFNGELWRVFLSQ 420
D + I + + + + P + +V + + + FN ++ L
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA----WNAFNLSC-KILL-- 270
Query: 421 HSGGTWVNASELEFQSGNKPVTYASLNGHAMYAKPGLVLQGSGGI-----GIRNDTAKSR 475
T +F S T+ SL+ H L + R
Sbjct: 271 ----TTRFKQVTDFLSAAT-TTHISLDHH----SMTLTPDEVKSLLLKYLDCRPQDLPRE 321
Query: 476 MLLDTGRHFSIVAADYLSGSASVITEPP--WLNYFREWGPKISYD-ISHEIKE-IEKLLP 531
+L R SI+A I + W + ++ ++ D ++ I+ + L P
Sbjct: 322 VLTTNPRRLSIIAE--------SIRDGLATW-DNWK----HVNCDKLTTIIESSLNVLEP 368
Query: 532 GKLKPAFQKF------VNSLPNEVL 550
+ + F + + +P +L
Sbjct: 369 AEYRKMFDRLSVFPPSAH-IPTILL 392
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 569 | |||
| 3st1_A | 214 | Necrosis-and ethylene-inducing protein; mpnep2, NL | 96.04 | |
| 3gnz_P | 213 | 25 kDa protein elicitor; toxin, necrosi, ethylenei | 92.96 |
| >3st1_A Necrosis-and ethylene-inducing protein; mpnep2, NLP family, unknown function, toxin; 1.80A {Moniliophthora perniciosa} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.042 Score=53.86 Aligned_cols=85 Identities=15% Similarity=0.132 Sum_probs=54.8
Q ss_pred CccEEEEEEecCCCcEEEEEEEEEccCCCCccceeeeeeccCCCCccCcccceeeeEEEEeCCCCeEeEEEeeccCCCee
Q 008353 347 NSQVYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQHSGGTW 426 (569)
Q Consensus 347 ~a~~y~~v~p~~g~~~~di~yw~FY~fNg~~~~~~g~~~~~~~~~~G~HvGDWEh~tvr~~n~~G~p~~v~~S~H~~G~~ 426 (569)
.+.+|...+= ..+ +.-|.|=+|+|=..+. ..+ -|-=||||+-|-+.|.+.++.+|-+|+|++=.-
T Consensus 67 gsqvY~R~~~-~~g-~~aimYawYFpKD~~~------------~g~-GHRHDWE~vVVWidn~~~~i~~vs~S~hg~y~~ 131 (214)
T 3st1_A 67 KAQTYVRSAT-FQG-KTALVYAWYMPKDEIS------------TGI-GHRHDWEGAVVFLNSDTQQIDGVAASAHGKWRK 131 (214)
T ss_dssp GCCEEEEEEE-ETT-EEEEEEEEEEEEEEEE------------TTE-EEEEEEEEEEEEEETTTCCEEEEEEEETTEEEE
T ss_pred CCCcEeEEEE-eCC-EEEEEEEEeccCCccC------------CCC-CccccceEEEEEEcCCCCeEEEEEeeccCCccc
Confidence 3468887764 333 4466666666654321 112 477799999999998667889999999975222
Q ss_pred eecCccceecCCccEE-EEcc
Q 008353 427 VNASELEFQSGNKPVT-YASL 446 (569)
Q Consensus 427 ~~~~~le~~~g~rPvv-Ysa~ 446 (569)
....+..+.+|+||.| |-..
T Consensus 132 ~~~~~~~~~~Gt~~kv~Y~~~ 152 (214)
T 3st1_A 132 YPNPGGANIDDTHVKLQYSAE 152 (214)
T ss_dssp EESCCGGGEETTEEEEEEEEE
T ss_pred cCCCccccccCCeeEEEEEec
Confidence 2223344467899865 7543
|
| >3gnz_P 25 kDa protein elicitor; toxin, necrosi, ethyleneinducing, immunityassociated responses, plants; 1.35A {Pythium aphanidermatum} PDB: 3gnu_P | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00