Citrus Sinensis ID: 008353


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------57
MGNNCLNNCSTPATNIAKKKSKGFPIETTFKLPAPIPTWPPGEGFGSGTIDLGGLQVRQITSFKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYAQPNNTPLFGWVLAAKDSSGLSLKKPVDYTLVWSSESLKIKQDGVAYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCVRSDFTDQCQTDTWIWGANKYGLNVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPNLQQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYRKGEESKPIPIEPMGSNLPQGGSNDGAYWLDLPVNDKAKERVKKGDLQNSQVYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQHSGGTWVNASELEFQSGNKPVTYASLNGHAMYAKPGLVLQGSGGIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSASVITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKLKPAFQKFVNSLPNEVLGEEGPTGPKAKSNWNGDEV
ccccccccccccccHHHHcccccccccccccccccccccccccccccEEEEcccEEEEEEcccEEEEEccccccccccEEEEccccccccccEEEcccccccccccccccEEEEEcccccccccccccEEEEEcccccccccccEEEEEEccccccEEEEEEEEccccccccccEEEEcccccccccccccEEcccccccEEEEEcccccccccccccccccEEEEccccccccccccHHHccHHHHcccccccccccccHHHHHHHHHcccEEEEccccccccccHHHHHHccEEcccccccccccccccccccccccccccccEEEcccccccccccccccccccccEEEEEEEcccccEEEEEEEEEEEcccccEEEEEEEccccccccccccccccEEEEEEEccccEEEEEEEEEEccccEEEccccccccccccEEEEEccccccccccccEEccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccHHHHEEEEcccccccHHHHHHHHcccccccccccccccccccccccccc
ccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccEEEEEEEEEEEEEEccccccccccEEEEcccccccccccEEEcEEEccccccccEEEEEEEccccccccccccEEEEEEcccccccccccEEEEccccccccEEEEEEEEcccccccHcHEEEEHHHHHHccccccEEEEcccccEEEEEEccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHccEEEEccccccccccHHHHHHccccEcccccccccccccccccccccccccccEEEEEcccccccHHHHccccccccEEEEEEEccccccEEEEEEEEEEcccccEEEEEcccccccccccccccccccEEEEEEEcccccEEEEEEEccccccEEEHHHHHHccccccEEEEEccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccHHEEccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHccHHHcccccccccccccccccccc
mgnnclnncstpatniakkkskgfpiettfklpapiptwppgegfgsgtidlgglQVRQITSFKKIWAtheggpdnagttffepstidippgffmlgcyaqpnntplFGWVLAakdssglslkkpvdyTLVWSSESlkikqdgvayvwlptppdgyknvghaitnfpekpaldkmrcvrsdftdqcqtdtwiwgankyglnvfsvrpsvrgteemgVSVGTFAaqingndnspstsTTLACLKNImaksnlssynympnLQQIETMVQAyspyiylhpdekylpssvswyfdngallyrkgeeskpipiepmgsnlpqggsndgaywldlpvndkakervkkgdlqnsqvylhikpmlgatytdIAIWifypfngparakvkfinniplgkigehvgdWEHVTLRISNFNGELWRVFLSQhsggtwvnaselefqsgnkpvtyaslnghamyakpglvlqgsggigirndtaKSRMLLDTGRHFSIVAADYlsgsasviteppwlnyfrewgpkisYDISHEIKEIEKllpgklkpAFQKFVNslpnevlgeegptgpkaksnwngdev
mgnnclnncstpatniakkkskgFPIETTFKLPAPIPTWPPGEGFGSGTIDLGGLQVRQITSFKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYAQPNNTPLFGWVLAAKDSSGLSLKKPVDYTLVWSSESLKIKQDGVAYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCVRSDFTDQCQTDtwiwgankyglNVFSVRPSVRGTEEMGVSVGTFAaqingndnspSTSTTLACLKNIMAKSNLSSYNYMPNLQQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYRKGEESKPIPIEPMGSNLPQGGSNDGAYWLDLPVNDKAKErvkkgdlqnsqvYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQHSGGTWVNASELEFQSGNKPVTYASLNGHAMYAKPGLVLQGSGGIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSASVITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKLKPAFQKFVNSLPnevlgeegptgpkaksnwngdev
MGNNCLNNCSTPATNIAKKKSKGFPIETTFKLPAPIPTWPPGEGFGSGTIDLGGLQVRQITSFKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYAQPNNTPLFGWVLAAKDSSGLSLKKPVDYTLVWSSESLKIKQDGVAYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCVRSDFTDQCQTDTWIWGANKYGLNVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPNLQQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYRKGEESKPIPIEPMGSNLPQGGSNDGAYWLDLPVNDKAKERVKKGDLQNSQVYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQHSGGTWVNASELEFQSGNKPVTYASLNGHAMYAKPGLVLQGSGGIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSASVITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKLKPAFQKFVNSLPNEVLGEEGPTGPKAKSNWNGDEV
***********************FPIETTFKLPAPIPTWPPGEGFGSGTIDLGGLQVRQITSFKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYAQPNNTPLFGWVLAAKDSSGLSLKKPVDYTLVWSSESLKIKQDGVAYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCVRSDFTDQCQTDTWIWGANKYGLNVFSVRPSVRGTEEMGVSVGTFAAQI***********TLACLKNIMAKSNLSSYNYMPNLQQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYR*************************AYWLDLPVN**********DLQNSQVYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQHSGGTWVNASELEFQSGNKPVTYASLNGHAMYAKPGLVLQGSGGIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSASVITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKLKPAFQKFVN**************************
*************************IETTFKLPAPIPTWPPGEGFGSGTIDLGGLQVRQITSFKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYAQPNNTPLFGWVLAAKDSSGLSLKKPVDYTLVWSSESLKIKQDGVAYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCVRSDFTDQCQTDTWIWGANKYGLNVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPNLQQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYRKGE********PMGSNLPQGGSNDGAYWLDLPVNDKAKERVKKGDLQNSQVYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQHSGGTWVNASELEFQSGNKPVTYASLNGHAMYAKPGLVLQGSGGIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSASVITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKLKPAFQKFVNSLPNEVLGEEGPTGPKAKSNWNGD**
MGNNCLNNCSTPATNIAKKKSKGFPIETTFKLPAPIPTWPPGEGFGSGTIDLGGLQVRQITSFKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYAQPNNTPLFGWVLAAKDSSGLSLKKPVDYTLVWSSESLKIKQDGVAYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCVRSDFTDQCQTDTWIWGANKYGLNVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPNLQQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYRKGEESKPIPIEPMGSNLPQGGSNDGAYWLDLPVNDKAKERVKKGDLQNSQVYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQHSGGTWVNASELEFQSGNKPVTYASLNGHAMYAKPGLVLQGSGGIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSASVITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKLKPAFQKFVNSLPNEVL*******************
**********************GFPIETTFKLPAPIPTWPPGEGFGSGTIDLGGLQVRQITSFKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYAQPNNTPLFGWVLAAKDSSGLSLKKPVDYTLVWSSESLKIKQDGVAYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCVRSDFTDQCQTDTWIWGANKYGLNVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPNLQQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYRKGEESKPIPIEPMGSNLPQGGSNDGAYWLDLPVNDKAKERVKKGDLQNSQVYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQHSGGTWVNASELEFQSGNKPVTYASLNGHAMYAKPGLVLQGSGGIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSASVITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKLKPAFQKFVNSLPNEVLGEEGPTGPKAK**W*****
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MGNNCLNNCSTPATNIAKKKSKGFPIETTFKLPAPIPTWPPGEGFGSGTIDLGGLQVRQITSFKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYAQPNNTPLFGWVLAAKDSSGLSLKKPVDYTLVWSSESLKIKQDGVAYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCVRSDFTDQCQTDTWIWGANKYGLNVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPNLQQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYRKGEESKPIPIEPMGSNLPQGGSNDGAYWLDLPVNDKAKERVKKGDLQNSQVYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQHSGGTWVNASELEFQSGNKPVTYASLNGHAMYAKPGLVLQGSGGIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSASVITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKLKPAFQKFVNSLPNEVLGEEGPTGPKAKSNWNGDEV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query569
225450265559 PREDICTED: uncharacterized protein LOC10 0.963 0.980 0.709 0.0
255565176551 conserved hypothetical protein [Ricinus 0.956 0.987 0.685 0.0
224121106587 predicted protein [Populus trichocarpa] 0.971 0.942 0.650 0.0
224143636546 predicted protein [Populus trichocarpa] 0.934 0.974 0.683 0.0
18406495553 uncharacterized protein [Arabidopsis tha 0.961 0.989 0.626 0.0
30689674583 uncharacterized protein [Arabidopsis tha 0.961 0.938 0.595 0.0
356560867556 PREDICTED: uncharacterized protein LOC10 0.963 0.985 0.616 0.0
357451131561 hypothetical protein MTR_2g062430 [Medic 0.936 0.950 0.598 0.0
356557046548 PREDICTED: uncharacterized protein LOC10 0.938 0.974 0.603 0.0
297824437564 hypothetical protein ARALYDRAFT_483550 [ 0.964 0.973 0.601 0.0
>gi|225450265|ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  826 bits (2133), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/575 (70%), Positives = 474/575 (82%), Gaps = 27/575 (4%)

Query: 4   NCLNNCSTPATNIAKKKSKGFPIETTFKLPAPIPTWPPGEGFGSGTIDLGG-LQVRQITS 62
           NCL   S  A++++KK+ K   IET+FKLPAP+PTWPPGEGF  GTIDLGG L+V QI+S
Sbjct: 3   NCLTVSS--ASDVSKKR-KSLAIETSFKLPAPMPTWPPGEGFAGGTIDLGGGLEVCQISS 59

Query: 63  FKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYAQPNNTPLFGWVLAAKDSS---- 118
           F K+WATHEGGPDN G TFFEPS +  P  F MLGCY+QPN  PLFGWVLA KD++    
Sbjct: 60  FTKVWATHEGGPDNLGATFFEPSPM--PEEFCMLGCYSQPNKKPLFGWVLAGKDNTNNPL 117

Query: 119 GLSLKKPVDYTLVWSSESLKIKQDGVAYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCV 178
           G +LKKP+DYTLVWSSESLKIKQDG  YVWLPTPPDGYK VGH ITN PEKP+LDK+RCV
Sbjct: 118 GGALKKPIDYTLVWSSESLKIKQDGNGYVWLPTPPDGYKAVGHVITNLPEKPSLDKIRCV 177

Query: 179 RSDFTDQCQTDTWIWG----ANKYGLNVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPS 234
           RSD TD C+ DTWIWG    AN  G NV+ ++PS RG + + VSVGTF AQ  G     +
Sbjct: 178 RSDLTDLCEADTWIWGLDKVANANGFNVYDLQPSDRGAQALAVSVGTFVAQNGG----AA 233

Query: 235 TSTTLACLKNIMAKSNLSSYNYMPNLQQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNG 294
           +S +LACLKNI   SNL +   MPNL Q++ +VQAYSP++YLHPDE+YLPSSVSW+F NG
Sbjct: 234 SSLSLACLKNI--SSNLYA---MPNLAQVDALVQAYSPWVYLHPDEQYLPSSVSWFFQNG 288

Query: 295 ALLYRKGEESKPIPIEPMGSNLPQGGSNDGAYWLDLPVNDKAKERVKKGDLQNSQVYLHI 354
           ALLY++GEESKP+ I+P GSNLPQGGSNDGAYWLDLPV+ KAKE VKKGDLQ+S  Y+HI
Sbjct: 289 ALLYQQGEESKPVNIDPTGSNLPQGGSNDGAYWLDLPVDAKAKETVKKGDLQDSMTYMHI 348

Query: 355 KPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELW 414
           KPMLGAT+TDIAIWIFYPFNGPARAKV+ I NI LGKIGEHVGDWEHVTLR+SNFNG+L 
Sbjct: 349 KPMLGATFTDIAIWIFYPFNGPARAKVELI-NISLGKIGEHVGDWEHVTLRVSNFNGKLM 407

Query: 415 RVFLSQHSGGTWVNASELEFQSGNKPVTYASLNGHAMYAKPGLVLQGSGGIGIRNDTAKS 474
            VF S+HS GTWVNASELEFQ+GNK V+YASL+GHA Y KPGLVLQGSG +GIRNDTAKS
Sbjct: 408 NVFFSEHSSGTWVNASELEFQNGNKVVSYASLHGHAFYPKPGLVLQGSGAMGIRNDTAKS 467

Query: 475 RMLLDTGRHFSIVAADYLSGSASVITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKL 534
           +M++DTG  + +VAA+YL    S + EPPWLNY+R+WGPKISYD++ EIKE+EKLLPGKL
Sbjct: 468 KMVMDTGTRYIVVAAEYL---GSAVVEPPWLNYYRKWGPKISYDLAAEIKEVEKLLPGKL 524

Query: 535 KPAFQKFVNSLPNEVLGEEGPTGPKAKSNWNGDEV 569
           K AF+K V SLPNE+LGEEGPTGPK K NW+GDEV
Sbjct: 525 KSAFEKLVKSLPNEILGEEGPTGPKMKKNWDGDEV 559




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565176|ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis] gi|223537142|gb|EEF38775.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224121106|ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|222872727|gb|EEF09858.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224143636|ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|222866459|gb|EEF03590.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|18406495|ref|NP_030964.1| uncharacterized protein [Arabidopsis thaliana] gi|15293039|gb|AAK93630.1| unknown protein [Arabidopsis thaliana] gi|20197184|gb|AAC16076.2| expressed protein [Arabidopsis thaliana] gi|22136978|gb|AAM91718.1| unknown protein [Arabidopsis thaliana] gi|330255303|gb|AEC10397.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30689674|ref|NP_850414.1| uncharacterized protein [Arabidopsis thaliana] gi|330255304|gb|AEC10398.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356560867|ref|XP_003548708.1| PREDICTED: uncharacterized protein LOC100808166 [Glycine max] Back     alignment and taxonomy information
>gi|357451131|ref|XP_003595842.1| hypothetical protein MTR_2g062430 [Medicago truncatula] gi|124360092|gb|ABN08108.1| Protein of unknown function DUF946, plant [Medicago truncatula] gi|355484890|gb|AES66093.1| hypothetical protein MTR_2g062430 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356557046|ref|XP_003546829.1| PREDICTED: uncharacterized protein LOC100806731 [Glycine max] Back     alignment and taxonomy information
>gi|297824437|ref|XP_002880101.1| hypothetical protein ARALYDRAFT_483550 [Arabidopsis lyrata subsp. lyrata] gi|297325940|gb|EFH56360.1| hypothetical protein ARALYDRAFT_483550 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query569
TAIR|locus:2050610583 AT2G44260 "AT2G44260" [Arabido 0.894 0.873 0.650 9.2e-202
TAIR|locus:2050559542 AT2G44230 "AT2G44230" [Arabido 0.934 0.981 0.583 1.9e-179
TAIR|locus:2078728583 AT3G01870 "AT3G01870" [Arabido 0.961 0.938 0.531 3.9e-163
TAIR|locus:2078723592 AT3G01880 "AT3G01880" [Arabido 0.927 0.891 0.535 4.6e-160
TAIR|locus:2103020567 AT3G04350 "AT3G04350" [Arabido 0.922 0.925 0.473 4.4e-139
TAIR|locus:2146188553 AT5G18490 "AT5G18490" [Arabido 0.908 0.934 0.468 1.1e-137
TAIR|locus:2172462566 AT5G43950 "AT5G43950" [Arabido 0.926 0.931 0.473 3.2e-136
TAIR|locus:2020210572 AT1G04090 "AT1G04090" [Arabido 0.931 0.926 0.480 2e-134
CGD|CAL0001572442 orf19.1800 [Candida albicans ( 0.319 0.411 0.277 1.3e-07
UNIPROTKB|Q59P04442 VPS62 "Potential vacuolar targ 0.319 0.411 0.277 1.3e-07
TAIR|locus:2050610 AT2G44260 "AT2G44260" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1886 (669.0 bits), Expect = 9.2e-202, Sum P(2) = 9.2e-202
 Identities = 345/530 (65%), Positives = 420/530 (79%)

Query:    42 GEGFGSGTIDLGG-LQVRQITSFKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYA 100
             G+GF  GTIDLGG L+V Q+++F K+W+T+EGGPDN G TFFEPS+I  P GF +LG YA
Sbjct:    71 GDGFAKGTIDLGGGLEVSQVSTFNKVWSTYEGGPDNLGATFFEPSSI--PSGFSILGYYA 128

Query:   101 QPNNTPLFGWVLAAKDSSGLSLKKPVDYTLVWSSESLKIKQDGVAYVWLPTPPDGYKNVG 160
             QPNN  LFGWVL A+D S  +LK PVDYTLV ++ESLKIKQDG  Y W P PPDGY+ VG
Sbjct:   129 QPNNRNLFGWVLTARDLSSNTLKPPVDYTLVGNTESLKIKQDGTGYFWQPVPPDGYQAVG 188

Query:   161 HAITNFPEKPALDKMRCVRSDFTDQCQTDTWIWGANKYGLNVFSVRPSVRGTEEMGVSVG 220
               +TN+ +KP LDK+RC+RSD T+QC+ DTWIWG N  G+N+ +++P+ RGT+  GV VG
Sbjct:   189 LIVTNYSQKPPLDKLRCIRSDLTEQCEADTWIWGTN--GVNISNLKPTTRGTQATGVYVG 246

Query:   221 TFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPNLQQIETMVQAYSPYIYLHPDE 280
             TF  Q   N + PS    L+CLKN   K + S+   MPN  QIE + Q +SP IY HPDE
Sbjct:   247 TFTWQTQ-NSSPPS----LSCLKN--TKLDFST---MPNGSQIEELFQTFSPCIYFHPDE 296

Query:   281 KYLPSSVSWYFDNGALLYRKGEESKPIPIEPMGSNLPQGGSNDGAYWLDLPVNDKAKERV 340
             +YLPSSV+WYF+NGALLY+KGEESKPIPIE  GSNLPQGGSNDG+YWLDLP++   KERV
Sbjct:   297 EYLPSSVTWYFNNGALLYKKGEESKPIPIESNGSNLPQGGSNDGSYWLDLPIDKNGKERV 356

Query:   341 KKGDLQNSQVYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWE 400
             KKGDLQ+++VYLHIKPMLGAT+TDI+IWIFYPFNGPA+AKVKF+N +PLG+IGEH+GDWE
Sbjct:   357 KKGDLQSTKVYLHIKPMLGATFTDISIWIFYPFNGPAKAKVKFVN-LPLGRIGEHIGDWE 415

Query:   401 HVTLRISNFNGELWRVFLSQHSGGTWVNASELEFQSG--NKPVTYASLNGHAMYAKPGLV 458
             H TLRISNF GELWRVFLSQHSGG W++A +LEFQ G  NK V YASL+GHAMY KPGLV
Sbjct:   416 HTTLRISNFTGELWRVFLSQHSGGIWIDACDLEFQDGGNNKFVAYASLHGHAMYPKPGLV 475

Query:   459 LQGSGGIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSASVITEPPWLNYFREWGPKISYD 518
             LQG  G+GIRNDT K + +LDTG  + ++AA+Y  G    + EPPW+ YFR+WGPKI Y+
Sbjct:   476 LQGDDGVGIRNDTGKGKKVLDTGLGYEVIAAEYDGGG---VVEPPWVKYFRKWGPKIDYN 532

Query:   519 ISHEIKEIEKLLPGKLKPAFQKFVNSLPNEVLGEEGPTGPKAKSNWNGDE 568
             +  E+K +E++LPG LK AF KFV  +P+EV GE+GPTGPK KSNW GDE
Sbjct:   533 VDDEVKSVERILPGLLKKAFVKFVKKIPDEVYGEDGPTGPKLKSNWAGDE 582


GO:0003674 "molecular_function" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
TAIR|locus:2050559 AT2G44230 "AT2G44230" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078728 AT3G01870 "AT3G01870" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078723 AT3G01880 "AT3G01880" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2103020 AT3G04350 "AT3G04350" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2146188 AT5G18490 "AT5G18490" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172462 AT5G43950 "AT5G43950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020210 AT1G04090 "AT1G04090" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
CGD|CAL0001572 orf19.1800 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59P04 VPS62 "Potential vacuolar targeting protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.148.143.1
hypothetical protein (586 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query569
pfam06101537 pfam06101, DUF946, Plant protein of unknown functi 0.0
>gnl|CDD|218898 pfam06101, DUF946, Plant protein of unknown function (DUF946) Back     alignment and domain information
 Score =  874 bits (2260), Expect = 0.0
 Identities = 343/552 (62%), Positives = 417/552 (75%), Gaps = 23/552 (4%)

Query: 25  PIETTFKLPAPIPTWPPGEGFGSGTIDLGGLQVRQITSFKKIWATHEGGPDNAGTTFFEP 84
           P  TTF LP+P+P+WP G GF  G IDLG L+V QI++F+K+W T+EGGPDN G TF+EP
Sbjct: 1   PEPTTFSLPSPLPSWPQGGGFAKGRIDLGELEVSQISTFEKVWRTYEGGPDNKGATFYEP 60

Query: 85  STIDIPPGFFMLGCYAQPNNTPLFGWVLAAKDSSG----LSLKKPVDYTLVWSSESLKIK 140
           +   IP GF  LG Y QPNN PLFGWVL A+D SG     +LK PVDYTLVW+++SLK+ 
Sbjct: 61  T--GIPEGFSCLGHYCQPNNRPLFGWVLVARDVSGSTTNPALKPPVDYTLVWNTDSLKVN 118

Query: 141 QDGV-AYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCVRSDFTDQCQTDTWIWGANKYG 199
           QD    Y WLP PPDGY+ VG  +T  P+KP+LD++RCVRSD TDQC+TDTWIWG N   
Sbjct: 119 QDSGCGYFWLPVPPDGYRAVGLVVTTSPDKPSLDEVRCVRSDLTDQCETDTWIWGTNS-P 177

Query: 200 LNVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPN 259
            NV+S RP  RG E  GVSVGTF  Q        S    +ACLKN+   S+LS+   MPN
Sbjct: 178 FNVWSTRPCNRGMEAKGVSVGTFFCQ---TGGLNSEPPPIACLKNL--DSDLSA---MPN 229

Query: 260 LQQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYRKGEESKPIPIEPMGSNLPQG 319
           L QI  ++Q Y P IY HPDE+YLPSSVSW+F NGALLY+KGEES P+PI+P GSNLPQG
Sbjct: 230 LDQIHALIQHYGPTIYFHPDEEYLPSSVSWFFKNGALLYKKGEESNPVPIDPNGSNLPQG 289

Query: 320 GSNDGAYWLDLPVNDKAKERVKKGDLQNSQVYLHIKPMLGATYTDIAIWIFYPFNGPARA 379
           GSNDG YW+DLP +D A+ERVKKG+L+++++Y+H+KP LG T+TDIA+WIF PFNGPA  
Sbjct: 290 GSNDGEYWIDLPDDDAARERVKKGNLESAELYVHVKPALGGTFTDIAMWIFCPFNGPATL 349

Query: 380 KVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQHSGGTWVNASELEF-QSGN 438
           KV FI +IPLGKIGEHVGDWEH TLRISNF+GELW V+ SQHSGG WV+AS+LEF Q GN
Sbjct: 350 KVGFI-SIPLGKIGEHVGDWEHFTLRISNFSGELWSVYFSQHSGGEWVDASDLEFIQGGN 408

Query: 439 KPVTYASLNGHAMYAKPGLVLQGSG--GIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSA 496
           KPV Y+SL+GHA +  PGL LQGS   GIGIRND AKS +++D+   + IVAA+YL G  
Sbjct: 409 KPVVYSSLHGHASFPHPGLYLQGSSKLGIGIRNDAAKSDLVVDSSTRYEIVAAEYL-GGG 467

Query: 497 SVITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKLKPAFQKFVNSLPNEVLGEEGPT 556
            V  EPPWLNY REWGP I YD   E++++EK+LPG L+ +F+  +N LP E+ GEEGPT
Sbjct: 468 VV--EPPWLNYMREWGPTIVYDSRSELEKVEKILPGFLRKSFENIINKLPVELYGEEGPT 525

Query: 557 GPKAKSNWNGDE 568
           GPK K+NW GDE
Sbjct: 526 GPKEKNNWEGDE 537


This family consists of several hypothetical proteins from Arabidopsis thaliana and Oryza sativa. The function of this family is unknown. Length = 537

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 569
PF06101535 DUF946: Plant protein of unknown function (DUF946) 100.0
PF06101535 DUF946: Plant protein of unknown function (DUF946) 98.91
PF05630206 NPP1: Necrosis inducing protein (NPP1); InterPro: 95.9
>PF06101 DUF946: Plant protein of unknown function (DUF946); InterPro: IPR009291 This family consists of several hypothetical proteins, which includes vacuolar protein sorting protein 62 Back     alignment and domain information
Probab=100.00  E-value=5.1e-169  Score=1363.27  Aligned_cols=527  Identities=57%  Similarity=1.058  Sum_probs=504.0

Q ss_pred             CcccccCCCCCCCCCCCCCceeeeeecCCeEEEEccccceeeecccCCCCCCceEEeeecCCCCCCceEEccccccCCCC
Q 008353           26 IETTFKLPAPIPTWPPGEGFGSGTIDLGGLQVRQITSFKKIWATHEGGPDNAGTTFFEPSTIDIPPGFFMLGCYAQPNNT  105 (569)
Q Consensus        26 ~~~~f~~p~~~p~~p~g~~Fa~g~i~lg~L~v~~~t~F~rVW~~~~g~~~~~~~SfWrP~~~~~P~Gy~~LGdy~~~~~~  105 (569)
                      +|++|+||+|||+||||+|||+|+|+||+|+|++|++|+|||.+.+++++++++|||||++  +|+||++||||||+|++
T Consensus         1 ~~~~f~~p~~~~~~p~g~~fa~g~I~lG~L~V~~~s~F~rVW~~~~g~~~~~~vSfwRP~~--vP~Gf~~LGdyaqpn~~   78 (535)
T PF06101_consen    1 IPTPFSLPAPLPSWPQGGGFASGRIDLGELEVAQVSTFERVWWDKGGGGSRKGVSFWRPVG--VPPGFVILGDYAQPNNK   78 (535)
T ss_pred             CCccccCCCCCCCCCCCCCceeeeEecCCEEEEEeccceEEEECCCCCCCCCceEEeccCC--CCCCceEEeeEeCCCCC
Confidence            5899999999999999999999999999999999999999998777778899999999998  79999999999999999


Q ss_pred             CCCccEEEEECCC----CCCccCCCCceEEEecCCcccccC-CceEEEeecCCCCceeecEEEeCCCCCCCCCeEEEecc
Q 008353          106 PLFGWVLAAKDSS----GLSLKKPVDYTLVWSSESLKIKQD-GVAYVWLPTPPDGYKNVGHAITNFPEKPALDKMRCVRS  180 (569)
Q Consensus       106 Pp~~~Vlvvrd~~----~~~l~~P~~f~lVW~d~~sg~k~~-~~~s~W~PvpP~GYvALG~Vvt~~~~kP~ld~vrCVR~  180 (569)
                      |++++|||+++.+    .++|++|++|+|||++.+++++++ .++|||+|+||+||+|||||||+++++|++++|||||+
T Consensus        79 P~~G~VLva~d~~~~~~~p~l~~Pv~f~lVW~~~~~~~~~~~~~~sfW~PvaP~GYvALG~Vvt~~~~~P~ld~vrCVR~  158 (535)
T PF06101_consen   79 PPNGFVLVARDVSGSPSNPALAKPVDFTLVWSDSGSGGKQDSEDVSFWLPVAPPGYVALGCVVTTGPEKPSLDSVRCVRS  158 (535)
T ss_pred             CCcceEEEEecCCcccCCcccCCCCcceEEEecCCCCcccCCccEEEEecCCCCCceEEEEEEeCCCCCCCCceEEEEch
Confidence            9999999999864    479999999999999998887654 37999999999999999999999999999999999999


Q ss_pred             cccccCCCccceeecCCCCeEEEeecCCCCCccccccceeeEEEeeCCCCCCCCCccccceeecccccccCCCCCCCCCh
Q 008353          181 DFTDQCQTDTWIWGANKYGLNVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPNL  260 (569)
Q Consensus       181 DLv~~~~~~~~iW~d~~s~~svW~v~p~~rg~~~~gv~~gTF~~~~~~~~~~p~~~~~~~cLkn~~~~~~~~~~~~~P~~  260 (569)
                      |||++|+..++||++.+  |+||++||++|||+++||++|||+|+++..++   .+..|+||||+++     +|++||++
T Consensus       159 DLv~~~~~~~~Iw~~~~--f~vw~vrP~~rG~~~~Gv~vGTF~~~~~~~~~---~~~~i~cLkn~~~-----~l~~mp~~  228 (535)
T PF06101_consen  159 DLVDQCEFSESIWDSSS--FSVWSVRPCDRGMWAKGVSVGTFFCQSGWSSS---EPPPIACLKNLDS-----SLSAMPNL  228 (535)
T ss_pred             HhcccccccceEEccCC--eEEEecCcccceeecCCCceeeEEeecCCCCC---cccChhHhhcCCc-----ccccCCch
Confidence            99999999999998444  99999999999999999999999999988632   3569999999999     89999999


Q ss_pred             hhHHHHHHHcCCeEEeCCCCCcCCCCHHHHHhcCeeeeecCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCcccccCcc
Q 008353          261 QQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYRKGEESKPIPIEPMGSNLPQGGSNDGAYWLDLPVNDKAKERV  340 (569)
Q Consensus       261 ~qi~~lv~~yAPlv~Lh~~E~y~PSsv~~f~~n~~l~~~~g~~~~p~~i~~~gsnLp~g~~nd~~~wldlp~d~~~~~~~  340 (569)
                      +||++||++|||+|||||||+|+||||+|||+|++++|++++.+.+.+|+.+|+|||++++||+.||||||.+..+++.+
T Consensus       229 ~qi~~li~~YaP~vylhpeE~YlPssV~~Ff~Ng~l~~~~g~~~~~~~i~~~gsnLp~~~~nd~~~~ldl~~~~~~~~~v  308 (535)
T PF06101_consen  229 DQIHALIQKYAPLVYLHPEERYLPSSVEWFFENGALLYKKGNESNPKPIDPNGSNLPQGGTNDGDYWLDLPDDDKNKESV  308 (535)
T ss_pred             HHHHHHHHhhCceEEecCccccCCccHHHHhhCceEEEcCCCccCCeecccccccCCCCCCCCccccccCcccccccccc
Confidence            99999999999999999999999999999999999999999998778999999999999999999999999998888999


Q ss_pred             ccCccCCccEEEEEEecCCCcEEEEEEEEEccCCCCccceeeeeeccCCCCccCcccceeeeEEEEeCCCCeEeEEEeec
Q 008353          341 KKGDLQNSQVYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQ  420 (569)
Q Consensus       341 ~~G~~~~a~~y~~v~p~~g~~~~di~yw~FY~fNg~~~~~~g~~~~~~~~~~G~HvGDWEh~tvr~~n~~G~p~~v~~S~  420 (569)
                      ++|+|++|++|+||||++|+++|||+||+||||||++++|||++ ++++++||+|||||||+||||+|++|+|++|||||
T Consensus       309 k~G~l~~a~~yv~Vkp~~Ggt~tDi~~w~FypfNg~~~~~vg~~-~~~~~~~G~HvGDWEH~tvR~~n~~g~~~~v~~S~  387 (535)
T PF06101_consen  309 KKGNLESAPAYVHVKPDKGGTFTDIFYWYFYPFNGPARLKVGPI-NIPLGKFGNHVGDWEHVTVRFSNFDGEPQAVYFSQ  387 (535)
T ss_pred             ccCCcCCCcEEEEEEEcCCCcEEEEEEEEEecCCCCccccccee-eecccccccccccceeEEEEEECCCCcEEEEEeee
Confidence            99999999999999999999999999999999999999999998 99999999999999999999999999999999999


Q ss_pred             cCCCeeeecCcccee-cCCccEEEEccCCccCCCCCccccCCCC--CCcccccccCCCceecCCCceeEEEeeccCCCCC
Q 008353          421 HSGGTWVNASELEFQ-SGNKPVTYASLNGHAMYAKPGLVLQGSG--GIGIRNDTAKSRMLLDTGRHFSIVAADYLSGSAS  497 (569)
Q Consensus       421 H~~G~~~~~~~le~~-~g~rPvvYsa~gsHa~Yp~~G~~~~~~~--~~g~~~dt~~~~~~wD~~~~~~~~~~~yl~g~~~  497 (569)
                      |++|+||+++++|+. .++|||||||+||||+||+||+|+|+..  ++||++|+++++.+||++++|++|+++|+ +  +
T Consensus       388 H~~G~~~~~~~le~~~~~~rPvvYsa~g~Ha~y~~~G~~~~g~~~l~~gi~~D~~~~~~~~D~~~~y~~v~~~y~-~--~  464 (535)
T PF06101_consen  388 HSGGQWYDYSDLEFIQDGNRPVVYSARGSHANYPSPGTHLQGSPKLGIGIRNDTTDSGPLWDSSLNYEVVAAEYL-G--S  464 (535)
T ss_pred             cCCCceechhhhccccCCCceEEEecCCcccCCCCCcccccCccccCccceecccCCcceEcCCcceEEEecccc-C--C
Confidence            999999999999984 5999999999999999999999999987  99999999999999999999999999998 7  5


Q ss_pred             CCCCCCccccccccCCCcCCCChHHHHHHHHhCCCCchhHHHHhhhcCCccccCCcCCCCCcccCCCCCCC
Q 008353          498 VITEPPWLNYFREWGPKISYDISHEIKEIEKLLPGKLKPAFQKFVNSLPNEVLGEEGPTGPKAKSNWNGDE  568 (569)
Q Consensus       498 ~~~~~~Wl~f~G~WG~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~p~e~~~~~GPtGPk~K~~w~gde  568 (569)
                      .+.+|+||+|+|+|||+++||++.|+++|+++||++||+++|+|+++||.|+++||||||||+|+||.|||
T Consensus       465 ~~~ep~WL~y~g~WG~~i~y~~~~e~~~~~~~lp~~~~~~~~~~~~~~p~e~~~eegptgpk~k~~w~gde  535 (535)
T PF06101_consen  465 GVVEPPWLNYMGRWGPKIVYDSRSEIDKVEKFLPGKLRFSFENIFNKLPNELYGEEGPTGPKEKNNWEGDE  535 (535)
T ss_pred             CCcCcchhhcccccCCcccCchHHHHHHHHHhChHHHHHHHHHHHHhCcHHhccCCCCCCcccccCCCCCC
Confidence            56799999999999999999999999999999999999999999999999999999999999999999998



The function of this family is unknown.

>PF06101 DUF946: Plant protein of unknown function (DUF946); InterPro: IPR009291 This family consists of several hypothetical proteins, which includes vacuolar protein sorting protein 62 Back     alignment and domain information
>PF05630 NPP1: Necrosis inducing protein (NPP1); InterPro: IPR008701 This family consists of several NPP1-like necrosis inducing proteins from oomycetes, fungi and bacteria Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query569
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 49.1 bits (116), Expect = 3e-06
 Identities = 64/445 (14%), Positives = 129/445 (28%), Gaps = 118/445 (26%)

Query: 155 GYKNVGHA-----ITNFPEKPALDKMRCVRSDF---------TDQCQTDTWIWGANKYGL 200
            YK++        + NF  K   D  + + S                T    W       
Sbjct: 17  QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE 76

Query: 201 NVFSVRPSVRGTEEMGVSVGTFAAQINGNDNSPSTSTTLACLKNIMAKSNLSSYNYMPNL 260
            +  V+  V     +  +     + I      PS  T +                Y+   
Sbjct: 77  EM--VQKFVEEVLRI--NYKFLMSPIKTEQRQPSMMTRM----------------YIEQR 116

Query: 261 QQIETMVQAYSPYIYLHPDEKYLPSSVSWYFDNGALLYRKG-EESKPIP---IEPMG--- 313
            ++    Q ++ Y      + YL            L  R+   E +P     I+ +    
Sbjct: 117 DRLYNDNQVFAKYNVSRL-QPYL-----------KL--RQALLELRPAKNVLIDGVLGSG 162

Query: 314 ----------SNLPQGGSNDGAYWLDLPVNDKAKERVKKGDLQNSQVYLHIKPMLGATYT 363
                     S   Q   +   +WL+L   +  +  ++   LQ   +   I P   +  +
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM--LQK--LLYQIDPNWTS-RS 217

Query: 364 DIAIWIFYPFNGPARAKVKFINNIPLGK---IGEHVGDWEHVTLRISNFNGELWRVFLSQ 420
           D +  I    +       + + + P      +  +V + +      + FN    ++ L  
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA----WNAFNLSC-KILL-- 270

Query: 421 HSGGTWVNASELEFQSGNKPVTYASLNGHAMYAKPGLVLQGSGGI-----GIRNDTAKSR 475
               T       +F S     T+ SL+ H       L       +       R       
Sbjct: 271 ----TTRFKQVTDFLSAAT-TTHISLDHH----SMTLTPDEVKSLLLKYLDCRPQDLPRE 321

Query: 476 MLLDTGRHFSIVAADYLSGSASVITEPP--WLNYFREWGPKISYD-ISHEIKE-IEKLLP 531
           +L    R  SI+A          I +    W + ++     ++ D ++  I+  +  L P
Sbjct: 322 VLTTNPRRLSIIAE--------SIRDGLATW-DNWK----HVNCDKLTTIIESSLNVLEP 368

Query: 532 GKLKPAFQKF------VNSLPNEVL 550
            + +  F +        + +P  +L
Sbjct: 369 AEYRKMFDRLSVFPPSAH-IPTILL 392


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query569
3st1_A214 Necrosis-and ethylene-inducing protein; mpnep2, NL 96.04
3gnz_P213 25 kDa protein elicitor; toxin, necrosi, ethylenei 92.96
>3st1_A Necrosis-and ethylene-inducing protein; mpnep2, NLP family, unknown function, toxin; 1.80A {Moniliophthora perniciosa} Back     alignment and structure
Probab=96.04  E-value=0.042  Score=53.86  Aligned_cols=85  Identities=15%  Similarity=0.132  Sum_probs=54.8

Q ss_pred             CccEEEEEEecCCCcEEEEEEEEEccCCCCccceeeeeeccCCCCccCcccceeeeEEEEeCCCCeEeEEEeeccCCCee
Q 008353          347 NSQVYLHIKPMLGATYTDIAIWIFYPFNGPARAKVKFINNIPLGKIGEHVGDWEHVTLRISNFNGELWRVFLSQHSGGTW  426 (569)
Q Consensus       347 ~a~~y~~v~p~~g~~~~di~yw~FY~fNg~~~~~~g~~~~~~~~~~G~HvGDWEh~tvr~~n~~G~p~~v~~S~H~~G~~  426 (569)
                      .+.+|...+= ..+ +.-|.|=+|+|=..+.            ..+ -|-=||||+-|-+.|.+.++.+|-+|+|++=.-
T Consensus        67 gsqvY~R~~~-~~g-~~aimYawYFpKD~~~------------~g~-GHRHDWE~vVVWidn~~~~i~~vs~S~hg~y~~  131 (214)
T 3st1_A           67 KAQTYVRSAT-FQG-KTALVYAWYMPKDEIS------------TGI-GHRHDWEGAVVFLNSDTQQIDGVAASAHGKWRK  131 (214)
T ss_dssp             GCCEEEEEEE-ETT-EEEEEEEEEEEEEEEE------------TTE-EEEEEEEEEEEEEETTTCCEEEEEEEETTEEEE
T ss_pred             CCCcEeEEEE-eCC-EEEEEEEEeccCCccC------------CCC-CccccceEEEEEEcCCCCeEEEEEeeccCCccc
Confidence            3468887764 333 4466666666654321            112 477799999999998667889999999975222


Q ss_pred             eecCccceecCCccEE-EEcc
Q 008353          427 VNASELEFQSGNKPVT-YASL  446 (569)
Q Consensus       427 ~~~~~le~~~g~rPvv-Ysa~  446 (569)
                      ....+..+.+|+||.| |-..
T Consensus       132 ~~~~~~~~~~Gt~~kv~Y~~~  152 (214)
T 3st1_A          132 YPNPGGANIDDTHVKLQYSAE  152 (214)
T ss_dssp             EESCCGGGEETTEEEEEEEEE
T ss_pred             cCCCccccccCCeeEEEEEec
Confidence            2223344467899865 7543



>3gnz_P 25 kDa protein elicitor; toxin, necrosi, ethyleneinducing, immunityassociated responses, plants; 1.35A {Pythium aphanidermatum} PDB: 3gnu_P Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00