Citrus Sinensis ID: 008528

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560--
Protein Sequence
MVRALDRGHSIEKSRSFKLKKMCEIPGRQVHSVTFESGNDGGSADDKTLPASQDSKPAGGERSLEAQRLSFALSRERGPVSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLPSPRDRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPSGKSDDSEKNVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQNKEPVPDSPKLEGEDMSDTPNSKTLSDFMGWDAEESDNNDNLFSTDNTEKYVKSEHETTNVMSKHMLSSAPTKKFSYLEKLENLSGLRSPTARH
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccEEEccccEEEEEcccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHccccccccHHHHHHHHHccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEccccccccccEEcHHHHEccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcHHcHEEEEcccccccccccEEEEEccccccHHHHcHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccccHHHHHHHHHcHccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHEcHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
mvraldrghsieKSRSFKLKkmceipgrqvhsvtfesgndggsaddktlpasqdskpaggersLEAQRLSFALSrergpvsrridsvdgppycllpstprdrheapplplpsprdrqpsdMELMKERFAKLLlgedmsgggkgVSSALALSNAITNLAASIfgeqrklepmpperKARWRKEINWLLSVTDHIVEfvpsqqkskegvSMEIMVTRQrndlhmdiPALRKLDAMLIESLDnfgyqnefwypsgksddseknvtrhedkwwiptvkvpenglseegRRWIQSQKESVNQVLKAAMAINAQVLsemeipesyieslpkngraslgdsiyksitvehfdpeqflatmdLSNEHAVLDLKNRIEASIVIWKRKmhhkdsksswgsavSLEKRELFEERAETILLLLKqrfpgisqstldiSKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYAdslaqnkepvpdspklegedmsdtpnsktlsdfmgwdaeesdnndnlfstdntekyVKSEHETTNVmskhmlssaptkkfsYLEKLenlsglrsptarh
Flexible Loop (DISEMBL)
mvraldrghsieksrsfklkkmceiPGRQVHSVTFESGNDGGSADDKTLPASqdskpaggerslEAQRLSFalsrergpvsrridsvdgppycllpstprdrheapplplpsprdrqpsdMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAasifgeqrklepmpperKARWRKEINWLLSVTDHIVEfvpsqqkskegvsMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPSGKSDDSEKNVTrhedkwwiptvkvpenglsEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEASIVIWKrkmhhkdsksswgsavSLEKRELFEERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSlaqnkepvpdspklegedmsdtpnsKTLSDFMGWDAEesdnndnlfstdnTEKYVKSEHEttnvmskhmlssaptKKFSYLEklenlsglrsptarh
Low Complexity Region (SEG)
MVRALDRGHSIEKSRSFKLKKMCEIPGRQVHSVTFESGNDGGSADDKTLPASQDSKPAGGERSLEAQRLSFALSRERGPVSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLPSPRDRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPSGKSDDSEKNVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQNKEPVPDSPKLEGEDMSDTPNSKTLSDFMGWDAEESDNNDNLFSTDNTEKYVKSEHETTNVMSKHMLSSAPTKKFSYLEKLENLSGLRSPTARH
Disordered region (IsUnstruct)
***************************************************************************************************************************************************LALSNAITNLAASIF***************RWRKEINWLLSVTDHIVEFVP************IMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYP**************EDKWWIPTVKVP**********WI******VNQVLKAAMAINAQVLSEMEIPESYI*********SLGDSIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEASIVIWKRKMH***********VSLEKRELFEERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYAD**************************************************************************************************
Disordered Region (DISOPRED)
***********************************************************************************************************************************************VSSALALSNAITNLAASIFGEQRKLEPMPP****RWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYP*****************WWIPTVKVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEASIVIW************************FEERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYA*****************************************************************************KKFSYLEKLENLSG*RS*****
Disordered Region (DISEMBL)
**********IEKSRSFKLKKMCEIPGRQVHSVTFES**************************LEAQRLSFALSRERGPVSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLPSPRDRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPSG***********HEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEASIVIWKR****************LEKRELFEERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQNKE******************SKTLSDFMGWDAEESDNNDNLFSTDNTEKYVKSEHETTNVMSKHMLSSAPTKKFSYLEKLENLS*********
Disordered Region (DISPRO)
*********SIEKSRSFKLKKMCEIPGRQVHSVTFES********************************************************************************PSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPSGK************DKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEASIVIWKRKMHH*****SW*SAVSLEKRELFEERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQN**************************************************************KHMLSSAPTKKFSYLEKLENL**********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVRALDRGHSIEKSRSFKLKKMCEIPGRQVHSVTFESGNDGGSADDKTLPASQDSKPAGGERSLEAQRLSFALSRERGPVSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLPSPRDRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPSGKSDDSEKNVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQNKEPVPDSPKLEGEDMSDTPNSKTLSDFMGWDAEESDNNDNLFSTDNTEKYVKSEHETTNVMSKHMLSSAPTKKFSYLEKLENLSGLRSPTARH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	562	2.2.26 [Sep-21-2011]
Q9LV40	523	Rho guanine nucleotide ex	yes	no	0.772	0.829	0.673	1e-171
Q93ZY2	548	Rop guanine nucleotide ex	no	no	0.656	0.673	0.516	1e-111
Q9LQ89	485	Rop guanine nucleotide ex	no	no	0.624	0.723	0.487	1e-100

>sp|Q9LV40|ROGF8_ARATH Rho guanine nucleotide exchange factor 8 OS=Arabidopsis thaliana GN=ROPGEF8 PE=1 SV=1

 Score =  603 bits (1555), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 320/475 (67%), Positives = 364/475 (76%), Gaps = 41/475 (8%)

Query: 107 PLPLPSPR-DRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQ 165
           PL  P  R +RQ +DME+MK+RFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQ
Sbjct: 71  PLTRPGKRSERQQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQ 130

Query: 166 RKLEPMPPERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIP 225
            KL+PMP +R+ARW+KEI+WLLSVTDHIVEFVPSQQ SK+GV  EIMVTRQR DL M+IP
Sbjct: 131 TKLQPMPQDRQARWKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIP 190

Query: 226 ALRKLDAMLIESLDNFGYQNEFWYPSGKSDDSEKNVT-RHEDKWWIPTVKVPENGLSEEG 284
           ALRKLDAMLI++LDNF   NEFWY S  S++ ++    R  DKWW+P VKVP  GLSE  
Sbjct: 191 ALRKLDAMLIDTLDNFRGHNEFWYVSRDSEEGQQARNDRTNDKWWLPPVKVPPGGLSEPS 250

Query: 285 RRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHF 344
           RR +  QK+SV QV KAAMAINAQVLSEMEIPESYI+SLPKNGRASLGDSIYKSIT E F
Sbjct: 251 RRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEWF 310

Query: 345 DPEQFLATMDLSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERA 404
           DPEQFLA +D+S EH VLDLKNRIEAS+VIWKRK+H KD+KSSWGSAVSLEKRELFEERA
Sbjct: 311 DPEQFLAMLDMSTEHKVLDLKNRIEASVVIWKRKLHTKDTKSSWGSAVSLEKRELFEERA 370

Query: 405 ETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYAD 464
           ETIL+LLKQ+FPG+ QS+LDISKIQ+N+DVGQA+LESYSRI+ESLA+TVMSRI+DVLY D
Sbjct: 371 ETILVLLKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYTVMSRIEDVLYTD 430

Query: 465 SLAQNK----EPVPDSPKLEGEDMSDT-------------PNSKTLSDFMGWDAEESDNN 507
           +LA  +    E   D  +    D                 P+SKTL DFMGW       N
Sbjct: 431 TLALKQTLLAEETSDGGRTTETDSESAGSSNSGEEAEKHDPHSKTLLDFMGW-------N 483

Query: 508 DNLFSTDNTEKYVKSEHETTNVMSKHMLSSAPTKKFSYLEKLENLSGLRSPTARH 562
           DN  S+   +K  KS + T              KK SYLEKLENL+G RSP  RH
Sbjct: 484 DN--SSKGGDKPTKSPNLT-------------PKKLSYLEKLENLNGFRSPKDRH 523

Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop GTPases by exchanging GDP with GTP. Active as homodimer.
Arabidopsis thaliana (taxid: 3702)

>sp|Q93ZY2|ROGF1_ARATH Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana GN=ROPGEF1 PE=1 SV=2

 Score =  401 bits (1031), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/405 (51%), Positives = 280/405 (69%), Gaps = 36/405 (8%)

Query: 95  LPSTPR---DRHEAPPLPLPSP---------RDRQP----SDMELMKERFAKLLLGEDMS 138
           +PS+PR    R    P P+  P          D+QP    S++E+MKERFAKLLLGEDMS
Sbjct: 49  IPSSPRVVAGRGFYFPAPVMLPVIGGKDVVWDDKQPDNDLSEIEMMKERFAKLLLGEDMS 108

Query: 139 GGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWRKEINWLLSVTDHIVEFVP 198
           GGGKGV +ALA+SNAITNL+A++FGE  +LEP+ P++KA WR+E+ WLL V+D IVE +P
Sbjct: 109 GGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRRELEWLLCVSDSIVELIP 168

Query: 199 SQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPS-----GK 253
           S Q+   G + EIM TR R+DL+ ++PAL+KLDAMLI+ LD F    EFWY       G 
Sbjct: 169 SIQQFPGGGTYEIMETRPRSDLYANLPALKKLDAMLIDMLDAFS-DTEFWYTDRGIVLGD 227

Query: 254 SDDSEKN---VTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVL 310
            D    N     R EDKWW+P  KVP NGLSEE R+ +Q  ++  NQ+LKAA+AIN+ VL
Sbjct: 228 CDKDSYNSPASVRQEDKWWLPCPKVPPNGLSEEARKKLQQCRDFANQILKAALAINSGVL 287

Query: 311 SEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEA 370
           +EMEIP+ Y+E+LPK+G+  LG+ IY+ +T   F PE  L  +DLS+EH  L++ NRIEA
Sbjct: 288 AEMEIPDPYLETLPKSGKECLGEIIYQYLTANKFSPECLLDCLDLSSEHQTLEIANRIEA 347

Query: 371 SIVIWKRK---MHHKDSK---SSWGSAVSL-----EKRELFEERAETILLLLKQRFPGIS 419
           ++ +W++K    H K +K   SSWG  V       E+ +   +RAET+L  L+ RFPG+ 
Sbjct: 348 AVHVWRQKNGRRHKKQAKLKLSSWGGKVKGLVNDNERNDFLVQRAETLLQSLRIRFPGLP 407

Query: 420 QSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYAD 464
           Q+TLD++KIQYN+DVGQ+ILESYSR++ES+A  + +RIDDVLY D
Sbjct: 408 QTTLDMNKIQYNKDVGQSILESYSRVMESMAFNITARIDDVLYVD 452

Acts as an activator of Rop GTPases by exchanging GDP with GTP. Stimulates Rop1 to control polarized pollen tube growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQ89|ROGF2_ARATH Rop guanine nucleotide exchange factor 2 OS=Arabidopsis thaliana GN=ROPGEF2 PE=1 SV=2

 Score =  367 bits (941), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/371 (48%), Positives = 259/371 (69%), Gaps = 20/371 (5%)

Query: 120 DMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARW 179
           ++E MKERF+KLLLGEDMSG GKGV +A+ +SNAITNL A++FG+  +LEP+  E+K  W
Sbjct: 116 ELETMKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLEIEQKTTW 175

Query: 180 RKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLD 239
           ++E+N LLSV D+I EF+P  Q    G ++E+M +R R D+++++PALRKLD+ML+E+LD
Sbjct: 176 KREMNCLLSVCDYIFEFIPKSQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALD 235

Query: 240 NFGYQNEFWYP-----SGKSDDSEKN------VTRHEDKWWIPTVKVPENGLSEEGRRWI 288
           +F  + EFWY      S KS  S         V R E+KWW+P   VP  GLSE+ R+ +
Sbjct: 236 SFQ-KTEFWYAEEGSLSMKSTRSATGSFRKVIVQRKEEKWWLPIPLVPLQGLSEKARKQL 294

Query: 289 QSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVE-HFDPE 347
           +S++ES NQ+ KAAMAIN+ +L EM+IP+SY+ +LPK+G+AS GD+IY+ +T    F PE
Sbjct: 295 KSKRESTNQIHKAAMAINSSILGEMDIPDSYMATLPKSGKASTGDAIYRHMTSSGRFSPE 354

Query: 348 QFLATMDLSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSL-------EKRELF 400
           + L  + + +EH  L L +R+EAS+  W+RK    +SKSSW     L       +K  + 
Sbjct: 355 KLLDRLKIVSEHEALQLADRVEASMYTWRRKACLNNSKSSWNMVKDLMSITERSDKNYVL 414

Query: 401 EERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDV 460
            ERAE++L  LKQR+P +SQ++LDI KI  N+DVG+A+LESYSR++E LA  +++ IDDV
Sbjct: 415 AERAESLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLESYSRVLEGLAFNIVAWIDDV 474

Query: 461 LYADSLAQNKE 471
           LY D   + +E
Sbjct: 475 LYVDKTMRGEE 485


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.129    0.368 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,234,070
Number of Sequences: 539616
Number of extensions: 9129901
Number of successful extensions: 21692
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 21670
Number of HSP's gapped (non-prelim): 37
length of query: 562
length of database: 191,569,459
effective HSP length: 123
effective length of query: 439
effective length of database: 125,196,691
effective search space: 54961347349
effective search space used: 54961347349
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)

Acts as an activator of Rop GTPases by exchanging GDP with GTP.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	562
255549950	554	conserved hypothetical protein [Ricinus	0.951	0.965	0.621	0.0
224142157	450	predicted protein [Populus trichocarpa]	0.758	0.946	0.724	0.0
356520539	562	PREDICTED: rho guanine nucleotide exchan	0.943	0.943	0.587	0.0
356529630	553	PREDICTED: LOW QUALITY PROTEIN: rho guan	0.943	0.958	0.590	1e-178
449448176	676	PREDICTED: rho guanine nucleotide exchan	0.932	0.775	0.583	1e-177
359482588	542	PREDICTED: rho guanine nucleotide exchan	0.928	0.963	0.591	1e-177
449519631	553	PREDICTED: LOW QUALITY PROTEIN: rho guan	0.932	0.947	0.585	1e-177
449516300	525	PREDICTED: rho guanine nucleotide exchan	0.919	0.984	0.592	1e-176
449443333	525	PREDICTED: rho guanine nucleotide exchan	0.919	0.984	0.591	1e-176
297738809	536	unnamed protein product [Vitis vinifera]	0.921	0.966	0.595	1e-174

>gi|255549950|ref|XP_002516026.1| conserved hypothetical protein [Ricinus communis] gi|223544931|gb|EEF46446.1| conserved hypothetical protein [Ricinus communis]

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/581 (62%), Positives = 431/581 (74%), Gaps = 46/581 (7%)

Query: 1   MVRALDRGHSIEKSRSFKLKKMCEIPG-RQVHSVTF-ESGN--DGGSADDKTLPASQDSK 56
           MVRAL++     +SR F  K M E  G R   S++  ES N  D  S DDK    SQ S+
Sbjct: 1   MVRALEQEQENLRSRLFHFKGMNENSGGRHAKSLSVDESSNTIDESSMDDKITFRSQGSR 60

Query: 57  PAGGERSLEAQRLSFALSR-ERGPVSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLPSPRD 115
            +  ++SLE Q++   LSR ++GP SR                 +D   A        +D
Sbjct: 61  HSS-DQSLEKQQIGSVLSRNDKGPKSR---------------FSKDEAAATT----QGKD 100

Query: 116 RQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPER 175
           +Q +DME MKERFAKLLLGEDMSGGGKGVSSALALSNA TNLAAS+FGEQ++LEPMP ER
Sbjct: 101 KQHTDMEQMKERFAKLLLGEDMSGGGKGVSSALALSNATTNLAASVFGEQQRLEPMPAER 160

Query: 176 KARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLI 235
           KARWRKEI+WLLSV+D+IVE VPSQQK+K+G +MEIMVTRQR DLHM+IPALRKLDAMLI
Sbjct: 161 KARWRKEIDWLLSVSDYIVELVPSQQKNKDGTNMEIMVTRQRTDLHMNIPALRKLDAMLI 220

Query: 236 ESLDNFGYQNEFWYPSGKSDDSEK-NVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKES 294
           + LDNF  QNEF+Y S  + DSEK +  R +DKWW+PT KVP NGLSE  R+++Q QK+ 
Sbjct: 221 DCLDNFKDQNEFYYISKDAPDSEKGSAKRKDDKWWLPTAKVPPNGLSEASRKFLQYQKDC 280

Query: 295 VNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMD 354
           VNQVLKAAMAINAQVLSEMEIPE+YIESLPKNGRASLGDSIY+SITVE FDP+QFL+TMD
Sbjct: 281 VNQVLKAAMAINAQVLSEMEIPENYIESLPKNGRASLGDSIYRSITVEFFDPDQFLSTMD 340

Query: 355 LSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQR 414
           LS+EH +LDLKNRIEASIVIWKRKM+ KD KS WGSAVSLEKRELFEERAETILL+LKQR
Sbjct: 341 LSSEHKILDLKNRIEASIVIWKRKMNQKDGKSGWGSAVSLEKRELFEERAETILLILKQR 400

Query: 415 FPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQN----- 469
           FPGI QS+LDISKIQYNRDVGQAILESYSRI+ESLA+TVMSRI+DVLYAD + +N     
Sbjct: 401 FPGIPQSSLDISKIQYNRDVGQAILESYSRILESLAYTVMSRIEDVLYADYVTRNPSYAG 460

Query: 470 --KEPVPD------SPKLEGEDMSDTPNSKTLSDFMGWDAEESDNNDNLFSTDNTEKYVK 521
             + P+ +      +P+ +    SD  NS TLSDFMGW+ + ++ +       N+++ VK
Sbjct: 461 QKRNPLKETPSESTTPREDSARTSDAANSMTLSDFMGWNFDSNEADGKKGPAGNSDEIVK 520

Query: 522 SEHETTNVMSKHMLSSAPTKKFSYLEKLENLSGLRSPTARH 562
            + + T    + + S    KK SY   LENL G+RSPTARH
Sbjct: 521 DDTKLT----EKLASIVTIKKPSY---LENLGGVRSPTARH 554

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142157|ref|XP_002324425.1| predicted protein [Populus trichocarpa] gi|222865859|gb|EEF02990.1| predicted protein [Populus trichocarpa]

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/464 (72%), Positives = 380/464 (81%), Gaps = 38/464 (8%)

Query: 121 MELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWR 180
           MELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAAS+FGEQ+KLEPM PERKARWR
Sbjct: 1   MELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQKKLEPMNPERKARWR 60

Query: 181 KEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDN 240
           KEI+WLLSVTDHIVEFVPSQQ SK+G+ MEIM TRQR+DL M+IPALRKLD +LI+ LD 
Sbjct: 61  KEIDWLLSVTDHIVEFVPSQQ-SKDGIDMEIMTTRQRSDLLMNIPALRKLDTILIDLLDQ 119

Query: 241 FGYQNEFWYPSGKSDDSEKNVT-RHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVL 299
           FG QNEFWY S   D  E+    R++DKWWIPTVKVP+NGL++  RRW+Q QK+SVNQVL
Sbjct: 120 FGSQNEFWYVSKDEDGLEQGTPPRNDDKWWIPTVKVPQNGLADVTRRWMQFQKDSVNQVL 179

Query: 300 KAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEH 359
           KAAMAINAQVLSEMEIPE+YIESLPKNGRASLGDSIYKSITVE+FDPEQFL+TMD+S EH
Sbjct: 180 KAAMAINAQVLSEMEIPENYIESLPKNGRASLGDSIYKSITVEYFDPEQFLSTMDMSTEH 239

Query: 360 AVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGIS 419
            VLDLKNRIEASIVIW+RKM+ KD KS+WGSAVSLEKRELFEERAETILL+LKQRFPGIS
Sbjct: 240 KVLDLKNRIEASIVIWQRKMNQKDGKSTWGSAVSLEKRELFEERAETILLILKQRFPGIS 299

Query: 420 QSTLDISKIQYNR-----------DVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQ 468
           QS+LDISKIQYN+           DVGQAILESYSRIIESLA+ ++S+I+DVLYADSLAQ
Sbjct: 300 QSSLDISKIQYNKARTYSIITSLQDVGQAILESYSRIIESLAYAILSKIEDVLYADSLAQ 359

Query: 469 ------NKEPVPDSPKLEGEDMSDTPNSKTLSDFMGWDAEESDNNDN-LFSTDNTEKY-- 519
                 N++P     +L+    ++TP SKTLSDFMGW  ++ + N N   STDN E    
Sbjct: 360 SPQLESNQKP---EEELDNLTSAETPTSKTLSDFMGWKVDQGEANMNKTTSTDNMENCQD 416

Query: 520 -VKSEHETTNVMSKHMLSSAPTKKFSYLEKLENLSGLRSPTARH 562
            +K + +TT             KKFSYLEKLENLSGLRSPTAR 
Sbjct: 417 KIKDKTDTT------------PKKFSYLEKLENLSGLRSPTARQ 448

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520539|ref|XP_003528919.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Glycine max]

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/594 (58%), Positives = 420/594 (70%), Gaps = 64/594 (10%)

Query: 1   MVRALDRGHSIEKSRSFKLKKMCEIPGRQVHSVTFESGNDGGSADDKTLPASQDSKPAGG 60
           MVRA  R  S++KS+SF  +KM EIPG+ +H +  +  ++ G +D K    S +S     
Sbjct: 1   MVRAFHRQISMQKSKSFHFRKMFEIPGKHIHGLFDKDHDEAGESDSKIYSKSFES----- 55

Query: 61  ERSLEAQRLSFALSRERGPVSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLPSPRDRQPSD 120
            RS   Q+    L+ +  P +            L    PR     PP P        P++
Sbjct: 56  -RSSLDQQFEIQLNSDHSPAA-----------SLGIEAPR----MPPKP--------PTE 91

Query: 121 MELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWR 180
            +LMKERFAKLLLGEDMSG G GVSSALALSNAITNLAAS+FGEQ KLEPM  ERKARWR
Sbjct: 92  ADLMKERFAKLLLGEDMSGAGNGVSSALALSNAITNLAASVFGEQSKLEPMSSERKARWR 151

Query: 181 KEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDN 240
           KEI WLLSVTD+IVEF PSQQ +K+G SMEIM TRQR DL M+IPALRKLDAMLI++LDN
Sbjct: 152 KEIEWLLSVTDYIVEFAPSQQIAKDGTSMEIMTTRQRTDLLMNIPALRKLDAMLIDTLDN 211

Query: 241 FGYQNEFWYPSGKSDDSEKNVT--RHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQV 298
           F  QNEFWY S   ++SE N    R  DKWW+PTVKVP  G+SE   +WIQ QK++VNQV
Sbjct: 212 FRDQNEFWYVSKNDENSEDNTNSQRKSDKWWLPTVKVPPTGMSEPAGKWIQFQKDNVNQV 271

Query: 299 LKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNE 358
           LKAAMAINAQ+LSEMEIPE+YIESLPKNGR SLG+S+YKSITVE+FDP QFL+TMD+S E
Sbjct: 272 LKAAMAINAQILSEMEIPENYIESLPKNGRESLGESVYKSITVEYFDPGQFLSTMDMSTE 331

Query: 359 HAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGI 418
           H VLDLKNRIEASIVIW+RKM +KDSKS+W SAVS+EKRELFEERAETILL+LK +FPG+
Sbjct: 332 HKVLDLKNRIEASIVIWRRKMTNKDSKSAWSSAVSIEKRELFEERAETILLMLKHQFPGL 391

Query: 419 SQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQN--------- 469
            QS+LDISKIQYN+DVGQAILESYSR+IESLA+TVMSRIDDVLYADS+ +N         
Sbjct: 392 PQSSLDISKIQYNKDVGQAILESYSRVIESLAYTVMSRIDDVLYADSVTKNPSLAVSSRR 451

Query: 470 ----KEPVP---DSPKLEGED----MSDTPNSKTLSDFMGWDAEESDNN----------D 508
                 P      SP  E E+     S+TP S TLSDFMGW + +  ++          +
Sbjct: 452 YSLDSSPAATEQTSPNSEDENSYLQSSETPPSMTLSDFMGWSSTKGGSDIKNTNSTRDIE 511

Query: 509 NLFSTDNTEKYVKSEHETTNVMSKHMLSSAPTKKFSYLEKLENLSGLRSPTARH 562
           +  ST + E+YVK + E +   S  +  + P+K + YLEKLE L+ L+SP ARH
Sbjct: 512 DTNSTGDIEEYVKEKDEKSITKSPKL--TTPSKSY-YLEKLEYLNALKSPIARH 562

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529630|ref|XP_003533392.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 8-like [Glycine max]

 Score =  632 bits (1630), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 344/583 (59%), Positives = 413/583 (70%), Gaps = 53/583 (9%)

Query: 1   MVRALDRGHSIEKSRSFKLKKMCEIPGRQVHSVTFESGNDGGSADDKTLPASQDSKPAGG 60
           MVRA     S+EKS+SF  +KM EIPG+ +H +  +  ++ G +D K    S +S+ +  
Sbjct: 1   MVRAFHHQISMEKSKSFHFRKMFEIPGKHIHGLFDKDHDEAGESDSKIYSKSFESRSSLD 60

Query: 61  ERSLEAQRLSFALSRERGPVSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLPSPRDRQPSD 120
             + E Q                 +S   P   L         EAP +P P P    P++
Sbjct: 61  HHTFEIQ----------------FNSDHSPTASL-------GIEAPKMP-PKP----PTE 92

Query: 121 MELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWR 180
            +LMKERFAKLLLGEDMSG G GVSSALALSNAITNLAAS+FGEQ KL PMP ERKARWR
Sbjct: 93  ADLMKERFAKLLLGEDMSGAGNGVSSALALSNAITNLAASVFGEQSKLGPMPSERKARWR 152

Query: 181 KEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDN 240
           KEI WLLSVTD+IVEF PSQQ +K+G SMEIM TRQR DL M+IPALRKLDAMLI++LDN
Sbjct: 153 KEIEWLLSVTDYIVEFAPSQQIAKDGTSMEIMTTRQRTDLLMNIPALRKLDAMLIDTLDN 212

Query: 241 FGYQNEFWYPSGKSDDSE--KNVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQV 298
           F  QNEFWY S   ++SE   N  R  DKWW+PTVKVP  GLSE   +WIQ QK++VNQV
Sbjct: 213 FRDQNEFWYVSKNDENSEVNSNSQRKSDKWWLPTVKVPPTGLSEPAGKWIQFQKDNVNQV 272

Query: 299 LKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNE 358
           LKAAMAINAQ+LSEMEIPE+YIESLPKNGR SLG+S+YKSITVE+FDP QFL+TMD+S E
Sbjct: 273 LKAAMAINAQILSEMEIPENYIESLPKNGRESLGESVYKSITVEYFDPGQFLSTMDMSTE 332

Query: 359 HAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGI 418
           H VLDLKNRIEASIVIW+RKM +KDSKS+W SAVS+EKRELFEERAETILL+LK +FPG+
Sbjct: 333 HKVLDLKNRIEASIVIWRRKMTNKDSKSAWSSAVSIEKRELFEERAETILLMLKHQFPGL 392

Query: 419 SQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQNKE------- 471
            QS+LDISKIQYN+DVGQAILESYSR+IESLA+TVMSRIDDVLYADS+ +N         
Sbjct: 393 PQSSLDISKIQYNKDVGQAILESYSRVIESLAYTVMSRIDDVLYADSVTKNPSLAVSSRR 452

Query: 472 ------PVPD--SP----KLEGEDMSDTPNSKTLSDFMGWDAEESDNNDNLFSTDNTEKY 519
                 PV +  SP    ++     S+TP S TLSD MGW    S N  +   T++    
Sbjct: 453 YSLDSVPVAEQTSPNSGDEISNLKFSETPPSMTLSDVMGWS---STNEGSDLKTNSAGDL 509

Query: 520 VKSEHETTNVMSKHMLSSAPTKKFSYLEKLENLSGLRSPTARH 562
            + E E    +  ++  + P+K + Y+EKLE L+ L+SP ARH
Sbjct: 510 EEYEKEKYEKVXLNLKLATPSKSY-YMEKLEYLNALKSPIARH 551

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448176|ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis sativus]

 Score =  629 bits (1622), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 345/591 (58%), Positives = 420/591 (71%), Gaps = 67/591 (11%)

Query: 1   MVRALDRGHSIEKSRSFKLKKMCEIPGRQVHSVTFESGN--DGGSADDKTLPASQDSKPA 58
           MVRA+++ H   +SR F  +   E  GR   S++ ES N  D  + DD +   SQ S P 
Sbjct: 124 MVRAMEQEHEGFRSRFFLFRGNHENTGRHAKSLSVESANVFDSVNEDDLSTSRSQGSTPV 183

Query: 59  GGERSLEAQRLSFALSRERGPVSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLPS------ 112
                          S E+           GPP  L PS   +R   P L          
Sbjct: 184 HN-------------SSEKHQA--------GPP--LAPSNRSERASKPKLSSKDNDLAAE 220

Query: 113 --PRDRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEP 170
              R++   +ME MKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAAS+FGEQ +LEP
Sbjct: 221 KEAREKMALEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWRLEP 280

Query: 171 MPPERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKL 230
           M  ERKARWRKEI+ LLSVTD+IVEFVPSQQKSK+G +MEIMVTRQRNDLH++IPALRKL
Sbjct: 281 MSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNMEIMVTRQRNDLHLNIPALRKL 340

Query: 231 DAMLIESLDNFGYQNEFWYPSGKSDDSEKNVTRHEDKWWIPTVKVPENGLSEEGRRWIQS 290
           DAMLI+ LDNF  QNEF+Y S  ++DSEK   +  DKWW+PT KVP NGLS+  R+++Q 
Sbjct: 341 DAMLIDCLDNFKDQNEFYYVSRDANDSEKGNNKRNDKWWLPTAKVPPNGLSDMSRKFLQY 400

Query: 291 QKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFL 350
           QK+ VNQVLKAAMAINAQ++SEMEIPE YIESLPKNGRASLGDSIYKSITVE FDP+QFL
Sbjct: 401 QKDCVNQVLKAAMAINAQIISEMEIPEDYIESLPKNGRASLGDSIYKSITVEFFDPDQFL 460

Query: 351 ATMDLSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLL 410
           ++MDL++EH +LDLK+RIEASIVIW+RKM+ KD KS+WGSAVS+EKRELFEERAETILL+
Sbjct: 461 SSMDLTSEHKILDLKDRIEASIVIWRRKMNQKDGKSTWGSAVSMEKRELFEERAETILLI 520

Query: 411 LKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQN- 469
           LK RFPGI QS+LDISKIQ+NRDVG A+LESYSRI+ESLA TVMSRI+DVL+AD L QN 
Sbjct: 521 LKHRFPGIPQSSLDISKIQFNRDVGHAVLESYSRILESLAFTVMSRIEDVLHADGLTQNP 580

Query: 470 ------KEPVPDSPKLEGEDMSD---TPNSKTLSDFMGWDAEESD---------NNDNLF 511
                 ++P  + P  + E++++   TP S TL DFMGW  ++++         N+D+L 
Sbjct: 581 SQIATRRKPTSEPPMEKLEELNNGPETPASMTLLDFMGWGQDQNETEMKKESFGNSDDL- 639

Query: 512 STDNTEKYVKSEHETTNVMSKHMLSSAPTKKFSYLEKLENLSGLRSPTARH 562
              N +  +K  ++  N+++         KK SY   LENLS +RSPTARH
Sbjct: 640 ---NLDSDLKQGNKAGNIVT--------NKKVSY---LENLSAVRSPTARH 676

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482588|ref|XP_002279325.2| PREDICTED: rho guanine nucleotide exchange factor 8-like [Vitis vinifera]

 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 344/582 (59%), Positives = 411/582 (70%), Gaps = 60/582 (10%)

Query: 1   MVRALDRGHSIEKSRSFKLKKMCEIPGRQVHSVTFESGNDGGSADDKTLPASQDSKPAGG 60
           MVR LD+     KS+    K MCE  GRQ    T ES +   S  D  + +   SK  G 
Sbjct: 1   MVRVLDQDQEPYKSKLVHFKGMCENGGRQTQRSTAESSSGAESPPDDRMISR--SKALGA 58

Query: 61  ERSLEAQRLSFALSRERGPVSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLPSPRDRQPSD 120
            RS      + + S++  P    +DS                                 D
Sbjct: 59  HRSRYDGAGAGSHSKDNRPSVYGLDS---------------------------------D 85

Query: 121 MELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWR 180
           +ELMKERF+KLLLGEDMSG GKGVSSALALSNAITN+AAS+FGE R+LEPMP ERK  WR
Sbjct: 86  IELMKERFSKLLLGEDMSGHGKGVSSALALSNAITNVAASVFGELRRLEPMPVERKTMWR 145

Query: 181 KEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDN 240
           +EI+WLLSV+DHIVE VP QQ+SK+G SME+MVTRQR DL M+IPALRKLDAMLI++L+N
Sbjct: 146 REIDWLLSVSDHIVEMVP-QQRSKDGTSMEVMVTRQRCDLLMNIPALRKLDAMLIDTLEN 204

Query: 241 FGYQNEFWYPSGKSDDSEK-NVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVL 299
           F  Q EF+YPSG + DS + +  R  DKWWIP  KVP NGLSE  R+W+Q QK+SVNQVL
Sbjct: 205 FKDQKEFYYPSGDAKDSSREDSQRTSDKWWIPNAKVPPNGLSEVTRKWLQFQKDSVNQVL 264

Query: 300 KAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEH 359
           KAAMAINAQ+LSEMEIPE+YIESLPKNGRASLGDSIYKSITV+HFDP QFL+TMDLS+  
Sbjct: 265 KAAMAINAQILSEMEIPENYIESLPKNGRASLGDSIYKSITVDHFDPGQFLSTMDLSSNR 324

Query: 360 AVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGIS 419
            +LDLKNRIEASIVIWKRKMH+KD KS+W SAVSLEKRELFEERAETILL++KQR+PG+ 
Sbjct: 325 KILDLKNRIEASIVIWKRKMHNKDGKSAWASAVSLEKRELFEERAETILLIIKQRYPGLD 384

Query: 420 QSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQN-------KEP 472
           QS LDI+KIQ+N+DVG AILESYSRI+E+LA TV+SRI+DVLYADSLAQN       + P
Sbjct: 385 QSQLDINKIQFNQDVGHAILESYSRILETLAFTVLSRIEDVLYADSLAQNPALASCKRNP 444

Query: 473 VPDS-----------PKLEGEDMS-DTPNSKTLSDFMGWDAEESDNNDNLFSTDNTEKYV 520
           +  S           PK E E +S  TP S TLSDFMGW+ E+ D  +   S  N+E+  
Sbjct: 445 LRGSSLDPEPLNFPNPKEEIEKLSTGTPQSMTLSDFMGWNLEKEDGEEKKGSGGNSEELS 504

Query: 521 KSEHETTNVMSKHMLSSAPTKKFSYLEKLENLSGLRSPTARH 562
           K++ +    ++  + +    KK SY+EKLENL GLRSPTARH
Sbjct: 505 KNDEKPMTKIANIITN----KKVSYIEKLENLGGLRSPTARH 542

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449519631|ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 8-like [Cucumis sativus]

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 346/591 (58%), Positives = 417/591 (70%), Gaps = 67/591 (11%)

Query: 1   MVRALDRGHSIEKSRSFKLKKMCEIPGRQVHSVTFESGN--DGGSADDKTLPASQDSKPA 58
           MVRA+++ H   +SR F  +   E  GR   S++ ES N  D  + DD +   SQ S P 
Sbjct: 1   MVRAMEQEHEGFRSRFFLFRGNHENTGRHAKSLSVESANVFDSVNEDDLSTSRSQGSTPV 60

Query: 59  GGERSLEAQRLSFALSRERGPVSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLPS------ 112
                          S E+           GPP  L PS   +R   P L          
Sbjct: 61  HN-------------SSEKHQA--------GPP--LAPSNRSERASKPKLSSKDNDLAAE 97

Query: 113 --PRDRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEP 170
              R++   +ME MKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAAS+FGEQ +LEP
Sbjct: 98  KEAREKMALEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWRLEP 157

Query: 171 MPPERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKL 230
           M  ERKARWRKEI+ LLSVTD+IVEFVPSQQKSK+G +MEIMVTRQRNDLH++IPALRKL
Sbjct: 158 MSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNMEIMVTRQRNDLHLNIPALRKL 217

Query: 231 DAMLIESLDNFGYQNEFWYPSGKSDDSEKNVTRHEDKWWIPTVKVPENGLSEEGRRWIQS 290
           DAMLI+ LDNF  QNEF+Y S  ++DSEK   +  DKWW+PT KVP NGLS+  R+++Q 
Sbjct: 218 DAMLIDCLDNFKDQNEFYYVSRDANDSEKGNNKRNDKWWLPTAKVPPNGLSDMSRKFLQY 277

Query: 291 QKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFL 350
           QK+ VNQVLKAAMAINAQ++SEMEIPE YIESLPKNGRASLGDSIYKSITVE FDP+QFL
Sbjct: 278 QKDCVNQVLKAAMAINAQIISEMEIPEDYIESLPKNGRASLGDSIYKSITVEFFDPDQFL 337

Query: 351 ATMDLSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLL 410
           ++MDL++EH +LDLK+RIEASIVIW+RKM+ KD KS+WGSAVS+EKRELFEERAETILL+
Sbjct: 338 SSMDLTSEHKILDLKDRIEASIVIWRRKMNQKDGKSTWGSAVSMEKRELFEERAETILLI 397

Query: 411 LKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQNK 470
           LK RFPGI QS+LDISKIQ+NRDVG A+LESYSRI+ESLA TVMSRI+DVL+AD L QN 
Sbjct: 398 LKHRFPGIPQSSLDISKIQFNRDVGHAVLESYSRILESLAFTVMSRIEDVLHADGLTQNP 457

Query: 471 EPV---------PDSPKLEG-EDMSDTPNSKTLSDFMGWDAEESD---------NNDNLF 511
             +         P + KLE   +  +TP S TL DFMGW  ++++         N+D+L 
Sbjct: 458 SQIATRRKPTSEPXNGKLEELNNGPETPASMTLLDFMGWGQDQNETEMKKESFGNSDDL- 516

Query: 512 STDNTEKYVKSEHETTNVMSKHMLSSAPTKKFSYLEKLENLSGLRSPTARH 562
              N +  +K  ++  N+++         KK SY   LENLS +RSPTARH
Sbjct: 517 ---NLDSDLKQGNKAGNIVT--------NKKVSY---LENLSAVRSPTARH 553

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449516300|ref|XP_004165185.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis sativus]

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 338/570 (59%), Positives = 417/570 (73%), Gaps = 53/570 (9%)

Query: 1   MVRALDRGHSIEKSRSFKLKKMCEIPGRQVHSVTFESGNDGGSADDKTLPASQDSKPAGG 60
           MVRAL +  S+++SRSF+LK++ E+PGRQ HS+  ESG +G          S+DS     
Sbjct: 1   MVRALIQQPSVQQSRSFQLKRVVELPGRQAHSLILESGQEG----------SRDSS---- 46

Query: 61  ERSLEAQRLSFALSRERGPVSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLPSPRDRQPSD 120
               E Q++ +AL   +GPVS           CL      D H          +    SD
Sbjct: 47  ----EPQKIGWALGDTKGPVS-----------CL------DAHGGIRARGLRCQPNSVSD 85

Query: 121 MELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWR 180
           ++LMK +FAKLLLGEDMSGGGKGVSSALALSNAITNLAAS FGEQ KLE + P +KARWR
Sbjct: 86  LDLMKAKFAKLLLGEDMSGGGKGVSSALALSNAITNLAASTFGEQ-KLEALSPGKKARWR 144

Query: 181 KEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDN 240
           +EI W LSVTDHIVEFVPS+Q SK+G+ MEIMVT QR DL M+IPALRKLDAML+  LD 
Sbjct: 145 REIEWFLSVTDHIVEFVPSKQTSKDGIDMEIMVTLQRKDLLMNIPALRKLDAMLLSYLDQ 204

Query: 241 FGYQNEFWYPSGKSDDSEKNVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVLK 300
           FG  +EFWY S   + ++ +  R+ DKWW+P VKVP +GLS+  R+W+  QKESVNQ+LK
Sbjct: 205 FGKLHEFWYVSRDDESAKDDTQRNGDKWWLPAVKVPPSGLSDVTRKWLLFQKESVNQILK 264

Query: 301 AAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHA 360
           AAMAINAQVL+EME+PESYIESLPKNG+ SLGDSIY+SIT ++F+PEQFL +MDLS EH 
Sbjct: 265 AAMAINAQVLTEMEVPESYIESLPKNGKTSLGDSIYRSITDDYFNPEQFLKSMDLSTEHK 324

Query: 361 VLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGISQ 420
           V+DLKNRIEASIVIWKRKMHHKD KSSWGSAVS EKRE+FEER ETIL L+KQ+FPGISQ
Sbjct: 325 VIDLKNRIEASIVIWKRKMHHKDGKSSWGSAVSFEKREIFEERVETILFLIKQKFPGISQ 384

Query: 421 STLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQNKEPVPDSPKLE 480
           S LD+SKIQ+++DVGQAILESYSR+IESLA ++MSRI+DVLYAD++A+ +  + +S  LE
Sbjct: 385 SALDVSKIQHSKDVGQAILESYSRVIESLAFSIMSRIEDVLYADTVAR-ESLIEES--LE 441

Query: 481 GEDMSD--------TPNSKTLSDFMGWDAEESDNNDNLFSTDNTEKYVKSEHETTNVMSK 532
              M+         + +SKTLSDFMGW+ E  +++  + S    E Y K E +    M+K
Sbjct: 442 NLSMNTEKRLSSSDSHSSKTLSDFMGWEVE--NDSSYIRSLAIKESYCKGEEDIN--MNK 497

Query: 533 HMLSSAPTKKFSYLEKLENLSGLRSPTARH 562
               + P K+ SYLEKLE+L+ LRSPTARH
Sbjct: 498 PATVATP-KRLSYLEKLESLA-LRSPTARH 525

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443333|ref|XP_004139434.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis sativus]

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 337/570 (59%), Positives = 416/570 (72%), Gaps = 53/570 (9%)

Query: 1   MVRALDRGHSIEKSRSFKLKKMCEIPGRQVHSVTFESGNDGGSADDKTLPASQDSKPAGG 60
           MVRAL +  S+++SRSF+LK++ E+PGRQ HS+  ESG +G          S+DS     
Sbjct: 1   MVRALIQQPSVQQSRSFQLKRVVELPGRQAHSLILESGQEG----------SRDSS---- 46

Query: 61  ERSLEAQRLSFALSRERGPVSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLPSPRDRQPSD 120
               E Q++ +AL   +GPVS           CL      D H          +    SD
Sbjct: 47  ----EPQKIGWALGDTKGPVS-----------CL------DAHGGIRARGLRCQPNSVSD 85

Query: 121 MELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWR 180
           ++LMK +FAKLLLGEDMSGGGKGVSSALALSNAITNLAAS FGEQ KLE + P +KARWR
Sbjct: 86  LDLMKAKFAKLLLGEDMSGGGKGVSSALALSNAITNLAASTFGEQ-KLEALSPGKKARWR 144

Query: 181 KEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDN 240
           +EI W LSVTDHIVEFVPS+Q SK+G+ MEIMVT QR DL M+IPALRKLDAML+  LD 
Sbjct: 145 REIEWFLSVTDHIVEFVPSKQTSKDGIDMEIMVTLQRKDLLMNIPALRKLDAMLLSYLDQ 204

Query: 241 FGYQNEFWYPSGKSDDSEKNVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVLK 300
           FG  +EFWY S   + ++ +  R+ DKWW+P VKVP +GLS+  R+W+  QKESVNQ+ K
Sbjct: 205 FGKLHEFWYVSRDDESAKDDTQRNGDKWWLPAVKVPPSGLSDVTRKWLLFQKESVNQIFK 264

Query: 301 AAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHA 360
           AAMAINAQVL+EME+PESYIESLPKNG+ SLGDSIY+SIT ++F+PEQFL +MDLS EH 
Sbjct: 265 AAMAINAQVLTEMEVPESYIESLPKNGKTSLGDSIYRSITDDYFNPEQFLKSMDLSTEHK 324

Query: 361 VLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGISQ 420
           V+DLKNRIEASIVIWKRKMHHKD KSSWGSAVS EKRE+FEER ETIL L+KQ+FPGISQ
Sbjct: 325 VIDLKNRIEASIVIWKRKMHHKDGKSSWGSAVSFEKREIFEERVETILFLIKQKFPGISQ 384

Query: 421 STLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQNKEPVPDSPKLE 480
           S LD+SKIQ+++DVGQAILESYSR+IESLA ++MSRI+DVLYAD++A+ +  + +S  LE
Sbjct: 385 SALDVSKIQHSKDVGQAILESYSRVIESLAFSIMSRIEDVLYADTVAR-ESLIEES--LE 441

Query: 481 GEDMSD--------TPNSKTLSDFMGWDAEESDNNDNLFSTDNTEKYVKSEHETTNVMSK 532
              M+         + +SKTLSDFMGW+ E  +++  + S    E Y K E +    M+K
Sbjct: 442 NLSMNTEKRLSSSDSHSSKTLSDFMGWEVE--NDSSYIRSLAIKESYCKGEEDIN--MNK 497

Query: 533 HMLSSAPTKKFSYLEKLENLSGLRSPTARH 562
               + P K+ SYLEKLE+L+ LRSPTARH
Sbjct: 498 PATVATP-KRLSYLEKLESLA-LRSPTARH 525

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738809|emb|CBI28054.3| unnamed protein product [Vitis vinifera]

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 345/579 (59%), Positives = 405/579 (69%), Gaps = 61/579 (10%)

Query: 1   MVRALDRGHSIEKSRSFKLKKMCEIPGRQVHSVTFESGNDGGSADDKTLPASQDSKPAGG 60
           M RALD    I+KS+SF+ KKM E PGR V S+  E+ +DGG+ DD+    SQ SK AG 
Sbjct: 2   MARALD---GIQKSKSFRFKKMLESPGRHVRSLLLEN-DDGGAGDDRVQFRSQGSKTAG- 56

Query: 61  ERSLEAQRLSFALSRERGPVSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLPSPRDRQPSD 120
           +R LE  +  F+L +          +          S+ R            P      +
Sbjct: 57  DRPLELHQTGFSLHQSSNSAQSSNSAQSSNSAQPSHSSLR------------PGASHSQE 104

Query: 121 MELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWR 180
           +E ++ERFAKLLLGEDMSG G GVSSALALSNAITNLAAS+FGEQ KLEPM  ERKA WR
Sbjct: 105 VEQIRERFAKLLLGEDMSGRGTGVSSALALSNAITNLAASVFGEQWKLEPMSAERKAMWR 164

Query: 181 KEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDN 240
           K+I+ LLSV D+IVE VPSQQ +K+G +ME+MV+RQR DL M+IPALRKLDAMLIE LDN
Sbjct: 165 KDIDLLLSVADYIVELVPSQQTAKDGTTMEVMVSRQRKDLLMNIPALRKLDAMLIEHLDN 224

Query: 241 FGYQNEFWYPSGKSDDSEKNVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVLK 300
           F   NEFWY S    D+E   +R +DKWW+P  KVP NGLS+  R+W+Q QKESVNQVLK
Sbjct: 225 FKGPNEFWYVS---RDAEDAGSREDDKWWLPRPKVPPNGLSDASRKWLQFQKESVNQVLK 281

Query: 301 AAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHA 360
           AAMAINAQ+LSEME+P+ YIESLPKNGRASLGDSIYKSITVE FDPEQ L+TMDLS +H 
Sbjct: 282 AAMAINAQLLSEMEVPDDYIESLPKNGRASLGDSIYKSITVEFFDPEQLLSTMDLSTDHK 341

Query: 361 VLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGISQ 420
           VL+ KN+IEASIVIWKRKM+HKD KS+WGSAVSLEKRELFEERAETILLLLKQRFPG++Q
Sbjct: 342 VLEFKNKIEASIVIWKRKMNHKDGKSTWGSAVSLEKRELFEERAETILLLLKQRFPGLAQ 401

Query: 421 STLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQNKE--------- 471
           S LD SKIQ+NRDVGQ+ILESYSRI+ESLA TVMSRI+DV+YADSLAQN           
Sbjct: 402 SQLDTSKIQFNRDVGQSILESYSRILESLAFTVMSRIEDVMYADSLAQNPSLAQTGRKPS 461

Query: 472 ----PVPDSPKLEGEDM---SDTPNSKTLSDFMGWDAEESDNNDNLFSTDNTEKYVK-SE 523
               P+  S + E E     + TP S TLSDFMGW         +L       K  K + 
Sbjct: 462 AVCLPLTGSTREETEKNPTETQTPTSMTLSDFMGW---------HLMGDTEPGKLNKVAI 512

Query: 524 HETTNVMSKHMLSSAPTKKFSYLEKLENLSGLRSPTARH 562
           H+ +N               SYL+KLENL GLRSPT+RH
Sbjct: 513 HKKSN---------------SYLDKLENLGGLRSPTSRH 536

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	562
TAIR|locus:2091742	523	ROPGEF8 "ROP (rho of plants) g	0.830	0.892	0.650	6.9e-158
TAIR|locus:2119320	517	ROPGEF9 "ROP (rho of plants) g	0.838	0.911	0.653	9.5e-153
TAIR|locus:2017844	515	ROPGEF12 "ROP (rho of plants)	0.782	0.854	0.655	5.2e-149
TAIR|locus:2018169	607	ROPGEF11 "ROP (rho of plants)	0.822	0.761	0.623	2e-143
TAIR|locus:2180781	493	ROPGEF10 "ROP (rho of plants)	0.811	0.924	0.599	2.8e-137
TAIR|locus:2093467	576	ROPGEF13 "ROP (rho of plants)	0.777	0.758	0.569	3.5e-123
TAIR|locus:2185153	546	ROPGEF7 "ROP (rho of plants) g	0.663	0.683	0.493	1.9e-99
TAIR|locus:2028701	576	ROPGEF14 "ROP (rho of plants)	0.665	0.649	0.430	8.5e-81
TAIR|locus:2121828	548	ROPGEF1 "ROP (rho of plants) g	0.492	0.505	0.537	4.8e-78
TAIR|locus:2153684	611	ROPGEF5 "ROP (rho of plants) g	0.476	0.438	0.505	7.5e-73

TAIR|locus:2091742 ROPGEF8 "ROP (rho of plants) guanine nucleotide exchange factor 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 1499 (532.7 bits), Expect = 6.9e-158, Sum P(2) = 6.9e-158
 Identities = 320/492 (65%), Positives = 375/492 (76%)

Query:    79 PVSRRIDS-VDGPPYCLLPSTPRDRHEAPPLPLPSPR-DRQPSDMELMKERFAKLLLGED 136
             P S+  DS V+ P    LP          PL  P  R +RQ +DME+MK+RFAKLLLGED
Sbjct:    49 PESQNSDSFVESPVESSLPMIS-------PLTRPGKRSERQQADMEMMKDRFAKLLLGED 101

Query:   137 MSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWRKEINWLLSVTDHIVEF 196
             MSGGGKGVSSALALSNAITNLAASIFGEQ KL+PMP +R+ARW+KEI+WLLSVTDHIVEF
Sbjct:   102 MSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQARWKKEIDWLLSVTDHIVEF 161

Query:   197 VPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPSGKSDD 256
             VPSQQ SK+GV  EIMVTRQR DL M+IPALRKLDAMLI++LDNF   NEFWY S  S++
Sbjct:   162 VPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLDNFRGHNEFWYVSRDSEE 221

Query:   257 SEK-NVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEI 315
              ++    R  DKWW+P VKVP  GLSE  RR +  QK+SV QV KAAMAINAQVLSEMEI
Sbjct:   222 GQQARNDRTNDKWWLPPVKVPPGGLSEPSRRMLYFQKDSVTQVQKAAMAINAQVLSEMEI 281

Query:   316 PESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEASIVIW 375
             PESYI+SLPKNGRASLGDSIYKSIT E FDPEQFLA +D+S EH VLDLKNRIEAS+VIW
Sbjct:   282 PESYIDSLPKNGRASLGDSIYKSITEEWFDPEQFLAMLDMSTEHKVLDLKNRIEASVVIW 341

Query:   376 KRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGISQSTLDISKIQYNRDVG 435
             KRK+H KD+KSSWGSAVSLEKRELFEERAETIL+LLKQ+FPG+ QS+LDISKIQ+N+DVG
Sbjct:   342 KRKLHTKDTKSSWGSAVSLEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQFNKDVG 401

Query:   436 QAILESYSRIIESLAHTVMSRIDDVLYADSLAQNKEPVPDSPKLEGEDMSDTPNSKTLSD 495
             QA+LESYSRI+ESLA+TVMSRI+DVLY D+LA  +  + +    +G   ++T +    S 
Sbjct:   402 QAVLESYSRILESLAYTVMSRIEDVLYTDTLALKQTLLAEETS-DGGRTTETDSESAGSS 460

Query:   496 FMGWDAEESDNN-----DNLFSTDNTEKYVKSEHETTNVMSKHMLSSAPTKKFSYLEKLE 550
               G +AE+ D +     D +   DN+ K      ++ N+         P KK SYLEKLE
Sbjct:   461 NSGEEAEKHDPHSKTLLDFMGWNDNSSKGGDKPTKSPNL--------TP-KKLSYLEKLE 511

Query:   551 NLSGLRSPTARH 562
             NL+G RSP  RH
Sbjct:   512 NLNGFRSPKDRH 523

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=IPI

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2119320 ROPGEF9 "ROP (rho of plants) guanine nucleotide exchange factor 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 1490 (529.6 bits), Expect = 9.5e-153, P = 9.5e-153
 Identities = 321/491 (65%), Positives = 374/491 (76%)

Query:    79 PVSRRIDSVDGPPY-CLLPSTPRDRHEAPPLPLPSPR-DRQPSDMELMKERFAKLLLGED 136
             P S+  DS+ G P     P T R         L S R D+Q S+ E+MK+RF KLLLGED
Sbjct:    40 PESQTQDSLGGSPVETSRPMTSR---------LISRRQDKQQSETEMMKDRFTKLLLGED 90

Query:   137 MSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWRKEINWLLSVTDHIVEF 196
             MSGGGKGVSSALALSNAITNLAASIFGEQ KL+PM P+R+ARW+KEI+WLLSVTDHIVEF
Sbjct:    91 MSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMAPDRRARWKKEIDWLLSVTDHIVEF 150

Query:   197 VPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPSGKSDD 256
             VPSQQ SKEGV  EIMVTRQR DL M+IPALRKLDAMLI++LDNF   NEFWY S  S++
Sbjct:   151 VPSQQISKEGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLDNFRGHNEFWYVSRDSEE 210

Query:   257 SEK-NVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEI 315
              ++    R +DKWW+P VKVP NGLSE  RR +  QK+SV+QV KAAMAINAQVLSEM I
Sbjct:   211 GKQARNERTKDKWWLPPVKVPPNGLSESARRMLHFQKDSVSQVQKAAMAINAQVLSEMAI 270

Query:   316 PESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEASIVIW 375
             P+SYIESLPKNGR SLGDS+YKSIT E FDPEQFL+T+DLS EH VLD+KNRIEASIVIW
Sbjct:   271 PDSYIESLPKNGRVSLGDSLYKSITEEWFDPEQFLSTLDLSTEHKVLDVKNRIEASIVIW 330

Query:   376 KRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGISQSTLDISKIQYNRDVG 435
             KRK+H KD+KSSWGSAVSLEKRELFEERAETIL+LLKQ+FPG+ QS+LDISKIQYN+DVG
Sbjct:   331 KRKLHLKDNKSSWGSAVSLEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQYNKDVG 390

Query:   436 QAILESYSRIIESLAHTVMSRIDDVLYADSLAQNK---EPVPDSPKLEGEDMSDTPNSKT 492
              A+LESYSRI+ESL +T MSRIDDVLYADSLA+ +   E   D  K+  E  S +  S  
Sbjct:   391 HAVLESYSRILESLGYTEMSRIDDVLYADSLARKQCTGEETSDGGKIATETDSASAGS-- 448

Query:   493 LSDFMGWDAEESDNNDNLFSTDNTEKYVKSEHETTNVMSKHMLSSAPT-KKFSYLEKLEN 551
              S++ G + E+ ++  N   T   +    S++ +     K   S   T KK SYLEKLEN
Sbjct:   449 -SNYSGEEIEKLESQ-NSSKTTLLDFIGWSDNSSKGQSEKPPKSPRMTPKKLSYLEKLEN 506

Query:   552 LSGLRSPTARH 562
             L+G RSP  RH
Sbjct:   507 LNGFRSPKDRH 517

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0010048 "vernalization response" evidence=RCA

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

GO:0080092 "regulation of pollen tube growth" evidence=IGI

TAIR|locus:2017844 ROPGEF12 "ROP (rho of plants) guanine nucleotide exchange factor 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 1438 (511.3 bits), Expect = 5.2e-149, Sum P(2) = 5.2e-149
 Identities = 304/464 (65%), Positives = 362/464 (78%)

Query:    89 GPPYCLLPSTPRDRHEAPPLPLPSPRDRQP-SDMELMKERFAKLLLGEDMSGGGKGVSSA 147
             GPP   L  +  D      L     R+RQ  +DME MKERF+KLLLGED SGGGKGVSSA
Sbjct:    63 GPP---LSRSAADEAVLAALAASQARERQLLADMEQMKERFSKLLLGEDNSGGGKGVSSA 119

Query:   148 LALSNAITNLAASIFGEQRKLEPMPPERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGV 207
             LALSNAITNLAAS+FGEQR+LEPMP ER+ARWRKEI+WLLSVTD++VEF PSQQK+K+G 
Sbjct:   120 LALSNAITNLAASVFGEQRRLEPMPAERRARWRKEIDWLLSVTDYVVEFAPSQQKNKDGT 179

Query:   208 SMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPSGKSDDSEKNVTRHEDK 267
             +MEIM TRQR DLHM+IPAL+KLDAMLI+ L+NF  Q+EF Y S  S D +    R+++K
Sbjct:   180 NMEIMTTRQRTDLHMNIPALKKLDAMLIDCLENFKDQSEFSYISKDSPDLDGK--RNDEK 237

Query:   268 WWIPTVKVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNG 327
             WWIPTVKVP +GLSE  RR++Q QK+ VNQVLKAAMAINAQVL EMEIPESYI+SLPKNG
Sbjct:   238 WWIPTVKVPPDGLSEASRRFLQYQKDCVNQVLKAAMAINAQVLFEMEIPESYIDSLPKNG 297

Query:   328 RASLGDSIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSS 387
             RASLGD +YK+ITV+ FDP+QFL++MD+S+EH ++DLKNRIEASI+IWKRKM +KD+KSS
Sbjct:   298 RASLGDQMYKNITVDFFDPDQFLSSMDMSSEHKIVDLKNRIEASIIIWKRKMVYKDNKSS 357

Query:   388 --WGSAVSLEKRELFEERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRI 445
               W S VSLEKRE+FEERAETILL+LKQR+PGISQS+LDISKIQ+N DVGQA+LESYSRI
Sbjct:   358 APWASGVSLEKREVFEERAETILLILKQRYPGISQSSLDISKIQFNEDVGQAVLESYSRI 417

Query:   446 IESLAHTVMSRIDDVLYADSLAQNKEPVPDSPKLEGEDMSDTPNSKTLSDFMGWDAEESD 505
             +ESLA+TV+SRIDDVL AD  A NK   P    LE E+ +    S TLSDFMGWD +++ 
Sbjct:   418 LESLAYTVLSRIDDVLEADR-AGNKRNTP----LEAEEET-LVGSMTLSDFMGWDFDQAA 471

Query:   506 NNDNLFSTDNTEKYVKSEHETTNVMSKHMLSSAPTKKFSYLEKL 549
             N +     D  +          + + K  LS   TKK SYLE L
Sbjct:   472 NAELESKKDLPD----------DPLIKEKLSVVTTKKTSYLETL 505

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009860 "pollen tube growth" evidence=IEP

GO:0090406 "pollen tube" evidence=IDA

GO:0080092 "regulation of pollen tube growth" evidence=IGI

TAIR|locus:2018169 ROPGEF11 "ROP (rho of plants) guanine nucleotide exchange factor 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 1402 (498.6 bits), Expect = 2.0e-143, P = 2.0e-143
 Identities = 306/491 (62%), Positives = 363/491 (73%)

Query:    86 SVDGPPYCLLPSTPRDRHEAPPLPLPSPRDRQ---PSDMELMKERFAKLLLGEDMSGGGK 142
             SVD P   +   TP    + P +      +      + ME MKE+F+KLLLGEDMSGGGK
Sbjct:   131 SVDRPSLPIGGVTPNRNDKLPRVSSSDSMEALIILQAAMEQMKEKFSKLLLGEDMSGGGK 190

Query:   143 GVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWRKEINWLLSVTDHIVEFVPSQQK 202
             GVSSALALSNAITNLAAS FGEQR+LEPM  +RK RWR+EI WL+SV D+IVEF P+QQ 
Sbjct:   191 GVSSALALSNAITNLAASAFGEQRRLEPMAVDRKTRWRREIGWLISVADYIVEFAPTQQT 250

Query:   203 SKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPSGKSDDSEKNVT 262
             +K+G SME+M TRQR DL  +IPAL+KLDAML++ LD F  Q+EF+Y    S DS +  T
Sbjct:   251 NKDGTSMEVMSTRQRTDLLCNIPALKKLDAMLLDCLDKFKDQDEFYYVKKDSPDSCE--T 308

Query:   263 RHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIES 322
             R+++KWW+P VKVP NGLSE  RR++QSQKE VNQVLKAAMAINAQVLSEMEIPESY+ES
Sbjct:   309 RNDEKWWLPAVKVPPNGLSEISRRFLQSQKECVNQVLKAAMAINAQVLSEMEIPESYLES 368

Query:   323 LPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEASIVIWKRKMHHK 382
             LPKNGRASLGD IY+ ITVE FD +QFL  MDLS+EH +LDLKNRIEASIVIWKRKM  K
Sbjct:   369 LPKNGRASLGDVIYRMITVEMFDADQFLIEMDLSSEHKILDLKNRIEASIVIWKRKMVQK 428

Query:   383 DSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESY 442
             D+KS WGS VS+EKRE FEERAETILLLLKQ FPGISQS+LDISKIQ+NRDVG AILESY
Sbjct:   429 DTKSPWGSTVSIEKREQFEERAETILLLLKQGFPGISQSSLDISKIQFNRDVGLAILESY 488

Query:   443 SRIIESLAHTVMSRIDDVLYADSLAQ---NKEP------VPDSPKLEGEDMSDTPN--SK 491
             SR++ESLAHTVMSRI+DVLYAD L Q   N  P      + ++ KL  E +S T +  S 
Sbjct:   489 SRVLESLAHTVMSRIEDVLYADQLTQEPTNNAPSKNRYSLKENEKLREERLSFTEDMASG 548

Query:   492 TLSDFMGWDAEESDNNDNLFSTDNTEKYVKSEHETTNVMSKHMLSSAPTKKFSYLEKLEN 551
             TLSD M W  + ++     F  D  EK + S+   T +M+ +       KK SYL+   N
Sbjct:   549 TLSDVMQWGNKNNEMKKESFFGDR-EKPLLSK--VTGIMTNN-------KKSSYLD---N 595

Query:   552 LSGLRSPTARH 562
             L  +RSPTAR+
Sbjct:   596 LGAMRSPTARY 606

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007017 "microtubule-based process" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0048364 "root development" evidence=IMP

GO:0080147 "root hair cell development" evidence=IMP

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2180781 ROPGEF10 "ROP (rho of plants) guanine nucleotide exchange factor 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 1344 (478.2 bits), Expect = 2.8e-137, P = 2.8e-137
 Identities = 289/482 (59%), Positives = 349/482 (72%)

Query:    98 TPRDRHEAPPLPLPSPR---DRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAI 154
             TP   HE      PS R     + SDME+MKERFAKLLLGEDMSGGG G +SALALSNAI
Sbjct:    21 TPE--HELAGHAAPSTRRGKQNRRSDMEVMKERFAKLLLGEDMSGGGTGETSALALSNAI 78

Query:   155 TNLAASIFGEQRKLEPMPPERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVT 214
             T LA S+FGEQ KL+PM PE K  WRKE+ WLLSV DHIV+FVPS+Q  K G   EIMVT
Sbjct:    79 TKLADSMFGEQMKLQPMYPETKENWRKEMGWLLSVIDHIVQFVPSRQMGKNGQFTEIMVT 138

Query:   215 RQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPSGKSDDSEKNVT-RHEDKWWIPTV 273
             +QR+DL  +IPALRKLD++L+E+LDNF  Q +FWY     +D++ N   R ++ WW+P V
Sbjct:   139 KQRDDLLTNIPALRKLDSVLLETLDNFKDQKDFWYVPRDMEDADHNGDWRRDENWWLPVV 198

Query:   274 KVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGD 333
             KVP +GLSEE RRW+Q+QK+SV QVLKAA AINA VLSEM +PE+YI+SLPKNG+ SLGD
Sbjct:   199 KVPTDGLSEESRRWLQNQKDSVAQVLKAATAINAHVLSEMHVPENYIDSLPKNGKTSLGD 258

Query:   334 SIYKSITVEHFDPEQFLATMDLSNEHAVLDLKNRIEASIVIWKRKM--HHKDSKSSWGSA 391
              +YKSIT E FDP+ F++ +DLS EH VLDLKNRIEAS+VIWKRKM    KD KS WGS 
Sbjct:   259 FLYKSITEESFDPDYFVSFLDLSTEHKVLDLKNRIEASMVIWKRKMCQKEKDGKSQWGST 318

Query:   392 VSLEKRELFEERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAH 451
             VSLEKRELFE RAETIL++LKQ+FPGI QS+L++SKI+ N+DVGQAILESYSR++ESLA 
Sbjct:   319 VSLEKRELFEVRAETILVMLKQQFPGIPQSSLEVSKIKNNKDVGQAILESYSRVLESLAS 378

Query:   452 TVMSRIDDVLYADSLAQNK---------EPVPDSPKLEGEDM--SDTPNSKTLSDFMGWD 500
              +MSRI+DVL AD L Q +         E   +S   E E +  ++TPNS+ LSDF+GW 
Sbjct:   379 KIMSRIEDVLEADRLVQRQLMGEAETRSESEAESEYEETEKVVAAETPNSRKLSDFIGWR 438

Query:   501 AEESDNNDNLFSTDNTEKYVKSEHETTNVMSKHMLSSAPTKKFSYLEKLENLSGLRSPTA 560
                SD   +   +D  E + K E E    M K     A  KKFSYL KLEN+   RSP+ 
Sbjct:   439 LS-SDTKKHSSMSD-IEFFHKVEQEKEKPMMKS--PRALPKKFSYLAKLENM---RSPSD 491

Query:   561 RH 562
             RH
Sbjct:   492 RH 493

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2093467 ROPGEF13 "ROP (rho of plants) guanine nucleotide exchange factor 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 1211 (431.4 bits), Expect = 3.5e-123, P = 3.5e-123
 Identities = 257/451 (56%), Positives = 332/451 (73%)

Query:   119 SDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKAR 178
             +++E MK++FAKLLLGEDMSGG KGVSSALALSNAITNLAAS FGE R+LE +  ++K R
Sbjct:   127 TELEQMKDKFAKLLLGEDMSGGSKGVSSALALSNAITNLAASAFGEIRRLEAISEDKKER 186

Query:   179 WRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESL 238
             WR+EI WLLSVTDHIVEF P+ Q +++G SME+M T+QR DL  +IP+L+KLD ML++ L
Sbjct:   187 WRREIGWLLSVTDHIVEFSPTHQTNEDGSSMEVMTTKQRTDLVSNIPSLKKLDEMLLDCL 246

Query:   239 DNFGYQNEFWYPSGKSDDSEK-NVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQ 297
             D F  Q+EF+Y +  S +SE  N TR++DKWW+P VKVP  GLSE  +R++ SQ+E V Q
Sbjct:   247 DKFKDQDEFYYVTPGSPESENSNSTRNDDKWWLPIVKVPPKGLSETLKRFLLSQRECVCQ 306

Query:   298 VLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSN 357
             VL +AMAIN+QVL+EMEIPESYI+SLPK GRASLGD IY+ IT+E FD EQFL  MDLS+
Sbjct:   307 VLNSAMAINSQVLTEMEIPESYIDSLPKKGRASLGDMIYRMITLEMFDAEQFLLEMDLSS 366

Query:   358 EHAVLDLKNRIEASIVIWKRKMHHKDSKSS--WGSAVSLEKRELFEERAETILLLLKQRF 415
             EH +LDLKN+ EAS+VIW+RK+   D+KSS  W + +S++KR+  EERA TIL L+KQ F
Sbjct:   367 EHKILDLKNKFEASVVIWQRKIVQIDNKSSSPWSTNLSMDKRQQLEERAATILQLIKQEF 426

Query:   416 PGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQNKE---- 471
             PGISQSTLDISKIQ+NRD+G AI+ESYSRI+ESLAHTVMSRI+DVL AD L QN E    
Sbjct:   427 PGISQSTLDISKIQFNRDIGLAIVESYSRILESLAHTVMSRIEDVLEADQLTQNPELAMC 486

Query:   472 PVPDSPKLEGEDMSDTPNSKTLSDFMGWDAEESDNNDNL-FSTDNTE-KYVKSEHETTNV 529
              +    + E  +  + PN   L D           ++ + ++ +  E +  KS+ +    
Sbjct:   487 KIHIVKETESPEKEEEPNFCLLEDRPKKQKPTISLSEVMQWNIETNEPRKEKSDKKLLTR 546

Query:   530 MSKHMLSSAPTKKFSYLEKLENLSGLRSPTA 560
             +S  ++S+   KK +YLE   +L   RSPTA
Sbjct:   547 VSSMIMSN--NKKTTYLE---SLGTTRSPTA 572

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2185153 ROPGEF7 "ROP (rho of plants) guanine nucleotide exchange factor 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
 Identities = 194/393 (49%), Positives = 276/393 (70%)

Query:   115 DRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPE 174
             D + S++E+MKERF+KLLLGEDMSG G GV +ALA+SNAITNL A++FG+  +LEP+P E
Sbjct:    65 DSRVSEVEMMKERFSKLLLGEDMSGSGNGVCTALAISNAITNLCATLFGQLWRLEPLPTE 124

Query:   175 RKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAML 234
             +K  WR+E+ WLL V+DHIVE  P+ Q   +G  +EIM  R R+DL++++PALRKLD ML
Sbjct:   125 KKEMWRREMEWLLCVSDHIVEMTPTWQTFPDGTKLEIMTCRPRSDLYVNLPALRKLDNML 184

Query:   235 IESLDNFGYQNEFWYPS-------GKSDDSE---KNVTRHEDKWWIPTVKVPENGLSEEG 284
             +E LD+F  + EFWY           +D S    K+  R EDKWW+P  +V   GL E  
Sbjct:   185 LEILDSFE-ETEFWYVDQGIMAHESAADGSSSFRKSFQRQEDKWWLPVPRVSPGGLQENS 243

Query:   285 RRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHF 344
             R+ +Q +++  NQ+LKAAMAIN+  L++MEIPESY+ESLP+ GR+ LGD IY+ I+ + F
Sbjct:   244 RKQLQHKRDCTNQILKAAMAINSITLADMEIPESYLESLPRKGRSCLGDLIYRYISSDQF 303

Query:   345 DPEQFLATMDLSNEHAVLDLKNRIEASIVIWKRKMHHK---DSKSSWGSA----VSLEKR 397
              PE  L  +DLS+EH  +++ NR+E+SI +W ++ + K   ++K+SW       V  +K 
Sbjct:   304 SPECLLDCLDLSSEHQAIEIANRVESSIYLWHKRTNSKPATNTKTSWEMVKELMVDADKL 363

Query:   398 ELFEERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRI 457
             EL  +RAE++LL LKQRFPG+ Q+ LD+SKIQYN+D+G++ILESYSR++ESLA  +++RI
Sbjct:   364 ELMADRAESLLLSLKQRFPGLPQTALDMSKIQYNKDIGKSILESYSRVLESLAFNIVARI 423

Query:   458 DDVLYADSLAQNKEPVPDSPKLEGEDMSDTPNS 490
             DD+L+ D L ++       P   G + +D P S
Sbjct:   424 DDLLFVDDLTRHSSD--QIPTTLGNNGNDAPKS 454

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2028701 ROPGEF14 "ROP (rho of plants) guanine nucleotide exchange factor 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
 Identities = 166/386 (43%), Positives = 246/386 (63%)

Query:   120 DMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARW 179
             D+E MKE+F+KLLLGED++GG KGV  ALALSNA+T+LA SIFGE  KLEP+  E+K +W
Sbjct:   136 DVEAMKEKFSKLLLGEDVTGGCKGVQVALALSNAVTHLATSIFGELWKLEPLCEEKKQKW 195

Query:   180 RKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLD 239
             R+E++WLLS T++++E VPS+Q    G S+EIM  + R D+HM++PAL+KLD+MLIE+LD
Sbjct:   196 RREMDWLLSPTNYMIELVPSKQNDANGRSLEIMTPKARADIHMNLPALQKLDSMLIETLD 255

Query:   240 NFGYQNEFWYPSGKSDDSEKNVTRHEDK-WWIPTVKVPENGLSEEGRRWIQSQKESVNQV 298
             +     EFWY    S    KN +  E K WW+P+ +VP+ GLS  GR+ +  + + V QV
Sbjct:   256 SM-VNTEFWYSEIGSRAEGKNKSTSESKRWWLPSPQVPKPGLSNSGRKKLLDKGKVVYQV 314

Query:   299 LKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDLSNE 358
              KA  AIN  +L EM +P    E++PK+G+ SLGD +YK + VE    ++   +++L  E
Sbjct:   315 FKATKAINENILLEMPVPIVIKEAIPKSGKNSLGDELYKMLAVESATVDEIFISLNLGTE 374

Query:   359 HAVLDLKNRIEASIVIWKRKMHHKDS------KSSWGSAVS----LEKRELFEERAETIL 408
             HA L+  N++E+++  WK ++  + S      ++SW  A      + + E    RAE + 
Sbjct:   375 HAALETVNKLESAMFAWKERITEQGSNGKSPVRASWSFAKDPLSEIGRNESLLNRAEALR 434

Query:   409 LLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQ 468
               +K + P +  S LD +KIQY++D+G A+LE+YSR + +LA  ++SR+ ++L  DSL+ 
Sbjct:   435 TQIKSKHPNLPHSFLDATKIQYDKDIGHAVLEAYSRTLANLAFRILSRMGEILKEDSLSN 494

Query:   469 NKEPVPDSPKLEGEDMSDTPNSKTLS 494
                P P S      D   TP    LS
Sbjct:   495 PNSPAPPSCFPSSRDPYRTPERPLLS 520

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0080092 "regulation of pollen tube growth" evidence=IGI

TAIR|locus:2121828 ROPGEF1 "ROP (rho of plants) guanine nucleotide exchange factor 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
 Identities = 159/296 (53%), Positives = 211/296 (71%)

Query:   115 DRQP----SDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEP 170
             D+QP    S++E+MKERFAKLLLGEDMSGGGKGV +ALA+SNAITNL+A++FGE  +LEP
Sbjct:    81 DKQPDNDLSEIEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEP 140

Query:   171 MPPERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKL 230
             + P++KA WR+E+ WLL V+D IVE +PS Q+   G + EIM TR R+DL+ ++PAL+KL
Sbjct:   141 LAPQKKAMWRRELEWLLCVSDSIVELIPSIQQFPGGGTYEIMETRPRSDLYANLPALKKL 200

Query:   231 DAMLIESLDNFGYQNEFWYPS-----GKSDDSEKNV---TRHEDKWWIPTVKVPENGLSE 282
             DAMLI+ LD F    EFWY       G  D    N     R EDKWW+P  KVP NGLSE
Sbjct:   201 DAMLIDMLDAFS-DTEFWYTDRGIVLGDCDKDSYNSPASVRQEDKWWLPCPKVPPNGLSE 259

Query:   283 EGRRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVE 342
             E R+ +Q  ++  NQ+LKAA+AIN+ VL+EMEIP+ Y+E+LPK+G+  LG+ IY+ +T  
Sbjct:   260 EARKKLQQCRDFANQILKAALAINSGVLAEMEIPDPYLETLPKSGKECLGEIIYQYLTAN 319

Query:   343 HFDPEQFLATMDLSNEHAVLDLKNRIEASIVIWKRK---MHHKDSK---SSWGSAV 392
              F PE  L  +DLS+EH  L++ NRIEA++ +W++K    H K +K   SSWG  V
Sbjct:   320 KFSPECLLDCLDLSSEHQTLEIANRIEAAVHVWRQKNGRRHKKQAKLKLSSWGGKV 375

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=ISM

GO:0009860 "pollen tube growth" evidence=IMP

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008356 "asymmetric cell division" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0080092 "regulation of pollen tube growth" evidence=IGI

TAIR|locus:2153684 ROPGEF5 "ROP (rho of plants) guanine nucleotide exchange factor 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
 Identities = 140/277 (50%), Positives = 198/277 (71%)

Query:   114 RDRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPP 173
             ++   +D+E+MKERFAKLLLGEDMSG GKGV +ALA+SNAITNL A+IFG+  +LEP+  
Sbjct:    96 KEMNSADVEMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATIFGQLWRLEPLSS 155

Query:   174 ERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAM 233
             E+K  WR+E+ W+LSV+DHIVE  PS Q   +G   E+M  R R DL +++PALRKLD M
Sbjct:   156 EKKEMWRREMEWILSVSDHIVELTPSTQTYPDGNKFEVMTCRPRFDLFINLPALRKLDNM 215

Query:   234 LIESLDNFGYQNEFWYP-----SGKSDDS---EKNVTRHEDKWWIPTVKVPENGLSEEGR 285
             L++ L +F  + EFWY      + ++D S    + + R E+KWW+P  ++  NGL+EE R
Sbjct:   216 LLDILASFK-KTEFWYVDQGIVASENDGSASFRRKIQRQEEKWWLPVPRLAPNGLTEEAR 274

Query:   286 RWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFD 345
               +  ++E   Q+LKAAMAIN+  L+EM++P+SY+E+LPKNGR+ LGD IY+ +T + F 
Sbjct:   275 TELNHKRECATQILKAAMAINSLALTEMDVPKSYLETLPKNGRSCLGDVIYRYVTSDKFS 334

Query:   346 PEQFLATMDLSNEHAVLDLKNRIEASIVIWKRKMHHK 382
              E  L  +DLS+EH  LD+ NR+EASI +W+R++  K
Sbjct:   335 AESLLDCLDLSSEHIALDIANRVEASIYVWRRRVQTK 371

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LV40	ROGF8_ARATH	No assigned EC number	0.6736	0.7722	0.8298	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	562
pfam03759	360	pfam03759, PRONE, PRONE (Plant-specific Rop nucleo	0.0

>gnl|CDD|217715 pfam03759, PRONE, PRONE (Plant-specific Rop nucleotide exchanger)

 Score =  645 bits (1665), Expect = 0.0
 Identities = 244/361 (67%), Positives = 294/361 (81%), Gaps = 7/361 (1%)

Query: 117 QPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERK 176
            PS+MELMKERFAKLLLGEDMSGGGKGVS+ALALSNAITNLAA++FGE  +LEP+ PE+K
Sbjct: 1   LPSEMELMKERFAKLLLGEDMSGGGKGVSTALALSNAITNLAATVFGELWRLEPLAPEKK 60

Query: 177 ARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIE 236
           A WR+E++WLLSVTD+IVEFVPS+Q   +G +ME+M TR R+DL+M++PALRKLDAML+E
Sbjct: 61  AMWRREMDWLLSVTDYIVEFVPSKQTLPDGTTMEVMTTRPRSDLYMNLPALRKLDAMLLE 120

Query: 237 SLDNFGYQNEFWYPS-GKSDDSEKNVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESV 295
            LD+F    EFWY   G      +   R E+KWW+P  KVP  GLSE  R+ +Q +++ V
Sbjct: 121 ILDSFK-DTEFWYVDQGSLSSFRRKSQRQEEKWWLPVPKVPPGGLSESSRKKLQHKRDCV 179

Query: 296 NQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATMDL 355
           NQ+LKAAMAIN+QVL+EMEIPESYIESLPKNGRASLGD+IY+ IT + F P+Q L  +DL
Sbjct: 180 NQILKAAMAINSQVLAEMEIPESYIESLPKNGRASLGDAIYRYITSDQFSPDQLLDCLDL 239

Query: 356 SNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVS-----LEKRELFEERAETILLL 410
           S+EH  L+L NRIEAS+ IW+RK H KDSKSSWGSAV       EKREL  ERAET+LL 
Sbjct: 240 SSEHKALELANRIEASMYIWRRKAHTKDSKSSWGSAVKDLMADGEKRELLAERAETLLLC 299

Query: 411 LKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQNK 470
           LKQRFPG+ Q++LDISKIQYN+DVGQAILESYSR++ESLA  +MSRIDDVLYAD LA+  
Sbjct: 300 LKQRFPGLPQTSLDISKIQYNKDVGQAILESYSRVLESLAFNIMSRIDDVLYADDLAKKS 359

Query: 471 E 471
           E
Sbjct: 360 E 360

This is a functional guanine exchange factor (GEF) of plant Rho GTPase. Length = 360

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	562
PF03759	365	PRONE: PRONE (Plant-specific Rop nucleotide exchan	100.0

>PF03759 PRONE: PRONE (Plant-specific Rop nucleotide exchanger); InterPro: IPR005512 In plants, the small GTP-binding proteins called Rops work as signalling switches that control growth, development and plant responses to various environmental stimuli

Probab=100.00  E-value=1.6e-192  Score=1429.69  Aligned_cols=351  Identities=68%  Similarity=1.090  Sum_probs=284.8

Q ss_pred             CChHHHHHHHHHhhhhcCCCCCCCCcchhHHHhhhhhhhhhhhhhccccccCCCChhHHhhhhhccceEeeccceeEEee
Q 008528          118 PSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWRKEINWLLSVTDHIVEFV  197 (562)
Q Consensus       118 ~se~e~MKErFaKLLLGEDmSG~gkGV~tAlAiSNAITNL~AsvFGe~~rLEPl~~ekK~~WrrEmdwLLsv~d~IVElv  197 (562)
                      ++|+||||||||||||||||||||||||||||||||||||||||||||||||||++|||+||||||||||||||||||||
T Consensus         2 ~se~e~mKErFaKLLLGEDmSG~gkGV~tAlAiSNAITNL~AtvFGe~~rLEPl~~ekk~~WrrEm~wLLsv~d~iVE~v   81 (365)
T PF03759_consen    2 PSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLAATVFGELWRLEPLSPEKKAMWRREMDWLLSVTDYIVELV   81 (365)
T ss_dssp             HHHHHHHHHHHHHHHTTTBTTSSS-S--HHHHHHHHHHHHHHHHHTT--SSS---HHHHHHHHHHHHHHHGGGGG-EEEE
T ss_pred             chHHHHHHHHHHHHhccCCCCCCCCcccHHHHHHHHHHHHHHHHhhhhhccCCCChHHHHHHHHhcceeecchhhhhhcc
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCceEEEEeeccccccccCchHHHHHHHHHHHHHHhcCCCCeeeeccCCCCCCC-------CccccccccccC
Q 008528          198 PSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPSGKSDDSE-------KNVTRHEDKWWI  270 (562)
Q Consensus       198 Ps~Q~~~dG~~~EvM~~r~RsDl~~NlPALrKLD~MLle~LDsF~d~tEFWYv~~g~~~~~-------~~~~r~eeKWWL  270 (562)
                      |++|++|||+++||||||||+|||||||||||||+||||+||||+| ||||||++|+.+..       ...+||++||||
T Consensus        82 Ps~Q~~~dG~~~EvM~~r~RsDl~~NlPALrKLD~MLie~LDsf~d-tEFwYv~~g~~~~~~~~~~~~~~~~r~~~KWWL  160 (365)
T PF03759_consen   82 PSKQTFPDGTTMEVMTTRPRSDLYMNLPALRKLDAMLIEILDSFKD-TEFWYVDQGIVADSDSSSSFRRSSQRQEEKWWL  160 (365)
T ss_dssp             EEEEE-TTS-EEEEEEEEE-HHHHTHHHHHHHHHHHHHHHHHTTCS--SSEE--TT------SHHHHT------CCCTTS
T ss_pred             cceeecCCCceEEEEecCccchhhcCcHHHHHHHHHHHHHHHhCCC-CeeEEecCCcccccccCccccCcccccCCcccC
Confidence            9999999999999999999999999999999999999999999998 99999999954422       245799999999


Q ss_pred             ccccCCCCCCCHHHHHHHhhhhHHHHHHHHHHHHHhHhhhhcCCCchHHHhhccccCccchhHHHhhhhccCCCChHHHH
Q 008528          271 PTVKVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFL  350 (562)
Q Consensus       271 P~pkVP~~GLSe~~RK~L~~qrd~vnQIlKAAmAIN~~vL~EMeiPe~y~esLPKnGrasLGd~iYr~it~d~Fspe~ll  350 (562)
                      |+|||||+||||++||+|||||||||||||||||||++||+|||||++|+|+||||||+||||.|||+||+|+||||+||
T Consensus       161 P~p~VP~~GLse~~rK~L~~~rd~~~QilKAAmaIN~~vL~EMeiP~~y~esLPKnGrasLGd~iYr~it~~~Fspe~ll  240 (365)
T PF03759_consen  161 PVPRVPPNGLSEESRKWLQHQRDCVNQILKAAMAINSQVLAEMEIPESYLESLPKNGRASLGDSIYRYITSEQFSPEQLL  240 (365)
T ss_dssp             --EE--TT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---HHHHHCS-SSHHHHHHHHHHHHCTSSS--HHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHhcccccHHHHHHHHhccCcCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCcchhhHHHhhhhhHHHHHHhhhcccCCCCccCcccccc-----hhHHHHHHHHHHHHHHHHHhhCCCCCcchhhh
Q 008528          351 ATMDLSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVS-----LEKRELFEERAETILLLLKQRFPGISQSTLDI  425 (562)
Q Consensus       351 ~~ldLssEH~~Le~~nRiEAsi~iWrrK~~~k~~kssW~~~v~-----~dKre~l~eRAEtlL~~LK~RfPglpQTsLD~  425 (562)
                      +||||||||+|||+||||||||||||||++++++|+|||.+|.     .|||++|++||||||+||||||||||||+||+
T Consensus       241 ~~ldlssEH~~le~~NRvEAai~vWrrK~~~k~~ksSWg~~vkdl~~~~dK~e~l~eRAEtlL~~LK~RfPgl~QT~LD~  320 (365)
T PF03759_consen  241 DCLDLSSEHKALELANRVEAAIYVWRRKICEKDSKSSWGSMVKDLMSDGDKRELLAERAETLLLCLKQRFPGLPQTSLDI  320 (365)
T ss_dssp             HTS--SSHHHHHHHHHHHHHHHHHHCH---------------------HHHHHHHHHHHHHHHHHHHHHSTT----HHHH
T ss_pred             HhcccccHHHHHHHHHHHHHHHHHHHHHhcCCCCccchhhhcccccccchHHHHHHHHHHHHHHHHHHhCCCCCchHHHH
Confidence            9999999999999999999999999999999999999976554     89999999999999999999999999999999


Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccC
Q 008528          426 SKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQN  469 (562)
Q Consensus       426 sKIQyNkDVG~aILESYSRVLesLAf~I~sRIdDVL~~D~~~k~  469 (562)
                      +|||||||||||||||||||||||||||+||||||||+|+++++
T Consensus       321 ~KIQyNkDVG~aILESYSRVLEsLAfnI~sRIdDVL~~D~~~~~  364 (365)
T PF03759_consen  321 SKIQYNKDVGQAILESYSRVLESLAFNILSRIDDVLYADDLTKN  364 (365)
T ss_dssp             HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Confidence            99999999999999999999999999999999999999999875

Rop proteins (Rho of plants, Rac-like and atRac in Arabidopsis thaliana (Mouse-ear cress)) belong to the Rho family of Ras-related GTP-binding proteins that turn on signalling pathways by switching from a GDP-bound inactive to a GTP-bound active conformation. Activation depends on guanine nucleotide exchange factors (GEFs) that catalyse the otherwise slow GDP dissociation for subsequent GTP binding. The plant-specific RopGEFs represent a unique family of exchange factor that display no homology to any known RhoGEFs from animals and fungi. They comprise a highly conserved catalytic domain termed PRONE (plant-specific Rop nucleotide exchanger) with exclusive substrate specificity for members of the Rop family. The PRONE domain has been shown to be necessary and sufficient to promote nucleotide release from Rop [, , ]. The PRONE domain can be divided into three highly conserved subdomains separated by two short stretches of variable amino acid residues [, ]. It is approximately 370 residues in length and displays an almost all alpha-helical structure except for a beta-turn that protrudes from the main body of the molecule. The overall structure of the PRONE domain can be divided into two subdomains, the first one including helices alpha1-5 and alpha13, the second alpha6-12 [].; GO: 0005089 Rho guanyl-nucleotide exchange factor activity; PDB: 2NTX_B 2NTY_B 2WBL_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	562
2nty_A	365	Rop4-Gdp-Prone8 Length = 365		1e-162
2ntx_A	365	Prone8 Length = 365		1e-147

>pdb|2NTY|A Chain A, Rop4-Gdp-Prone8 Length = 365

Iteration: 1
 Score =  567 bits (1462), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 278/354 (78%), Positives = 315/354 (88%), Gaps = 1/354 (0%)
Query: 115 DRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPE 174
           +RQ +DME+MK+RFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQ KL+PMP +
Sbjct: 5   ERQQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQD 64
Query: 175 RKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAML 234
           R+ARW+KEI+WLLSVTDHIVEFVPSQQ SK+GV  EIMVTRQR DL M+IPALRKLDAML
Sbjct: 65  RQARWKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAML 124
Query: 235 IESLDNFGYQNEFWYPSGKSDDSEKNVT-RHEDKWWIPTVKVPENGLSEEGRRWIQSQKE 293
           I++LDNF   NEFWY S  S++ ++    R  DKWW+P VKVP  GLSE  RR +  QK+
Sbjct: 125 IDTLDNFRGHNEFWYVSRDSEEGQQARNDRTNDKWWLPPVKVPPGGLSEPSRRMLYFQKD 184
Query: 294 SVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATM 353
           SV QV KAAMAINAQVLSEMEIPESYI+SLPKNGRASLGDSIYKSIT E FDPEQFLA +
Sbjct: 185 SVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEWFDPEQFLAML 244
Query: 354 DLSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQ 413
           D+S EH VLDLKNRIEAS+VIWKRK+H KD+KSSWGSAVSLEKRELFEERAETIL+LLKQ
Sbjct: 245 DMSTEHKVLDLKNRIEASVVIWKRKLHTKDTKSSWGSAVSLEKRELFEERAETILVLLKQ 304
Query: 414 RFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLA 467
           +FPG+ QS+LDISKIQ+N+DVGQA+LESYSRI+ESLA+TVMSRI+DVLY D+LA
Sbjct: 305 KFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYTVMSRIEDVLYTDTLA 358

>pdb|2NTX|A Chain A, Prone8 Length = 365

Iteration: 1
 Score =  516 bits (1330), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/354 (75%), Positives = 303/354 (85%), Gaps = 1/354 (0%)
Query: 115 DRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPE 174
           +RQ +D E  K+RFAKLLLGED SGGGKGVSSALALSNAITNLAASIFGEQ KL+P P +
Sbjct: 5   ERQQADXEXXKDRFAKLLLGEDXSGGGKGVSSALALSNAITNLAASIFGEQTKLQPXPQD 64
Query: 175 RKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAML 234
           R+ARW+KEI+WLLSVTDHIVEFVPSQQ SK+GV  EI VTRQR DL  +IPALRKLDA L
Sbjct: 65  RQARWKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIXVTRQRGDLLXNIPALRKLDAXL 124
Query: 235 IESLDNFGYQNEFWYPSGKSDDSEKNVT-RHEDKWWIPTVKVPENGLSEEGRRWIQSQKE 293
           I++LDNF   NEFWY S  S++ ++    R  DKWW+P VKVP  GLSE  RR +  QK+
Sbjct: 125 IDTLDNFRGHNEFWYVSRDSEEGQQARNDRTNDKWWLPPVKVPPGGLSEPSRRXLYFQKD 184
Query: 294 SVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLATM 353
           SV QV KAA AINAQVLSE EIPESYI+SLPKNGRASLGDSIYKSIT E FDPEQFLA +
Sbjct: 185 SVTQVQKAAXAINAQVLSEXEIPESYIDSLPKNGRASLGDSIYKSITEEWFDPEQFLAXL 244
Query: 354 DLSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQ 413
           D S EH VLDLKNRIEAS+VIWKRK+H KD+KSSWGSAVSLEKRELFEERAETIL+LLKQ
Sbjct: 245 DXSTEHKVLDLKNRIEASVVIWKRKLHTKDTKSSWGSAVSLEKRELFEERAETILVLLKQ 304
Query: 414 RFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLA 467
           +FPG+ QS+LDISKIQ+N+DVGQA+LESYSRI+ESLA+TV SRI+DVLY D+LA
Sbjct: 305 KFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYTVXSRIEDVLYTDTLA 358
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	562
2ntx_A	365	EMB|CAB41934.1, prone8; dimer, guanine nucleotide	0.0
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09

>2ntx_A EMB|CAB41934.1, prone8; dimer, guanine nucleotide exchange factor, signaling protein; HET: MSE; 2.20A {Arabidopsis thaliana} PDB: 2nty_A* 2wbl_A Length = 365

 Score =  541 bits (1394), Expect = 0.0
 Identities = 278/361 (77%), Positives = 317/361 (87%), Gaps = 1/361 (0%)

Query: 114 RDRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPP 173
            +RQ +DME+MK+RFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQ KL+PMP 
Sbjct: 4   SERQQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQ 63

Query: 174 ERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAM 233
           +R+ARW+KEI+WLLSVTDHIVEFVPSQQ SK+GV  EIMVTRQR DL M+IPALRKLDAM
Sbjct: 64  DRQARWKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAM 123

Query: 234 LIESLDNFGYQNEFWYPSGKSDDSEKNVT-RHEDKWWIPTVKVPENGLSEEGRRWIQSQK 292
           LI++LDNF   NEFWY S  S++ ++    R  DKWW+P VKVP  GLSE  RR +  QK
Sbjct: 124 LIDTLDNFRGHNEFWYVSRDSEEGQQARNDRTNDKWWLPPVKVPPGGLSEPSRRMLYFQK 183

Query: 293 ESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLAT 352
           +SV QV KAAMAINAQVLSEMEIPESYI+SLPKNGRASLGDSIYKSIT E FDPEQFLA 
Sbjct: 184 DSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEWFDPEQFLAM 243

Query: 353 MDLSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLK 412
           +D+S EH VLDLKNRIEAS+VIWKRK+H KD+KSSWGSAVSLEKRELFEERAETIL+LLK
Sbjct: 244 LDMSTEHKVLDLKNRIEASVVIWKRKLHTKDTKSSWGSAVSLEKRELFEERAETILVLLK 303

Query: 413 QRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQNKEP 472
           Q+FPG+ QS+LDISKIQ+N+DVGQA+LESYSRI+ESLA+TVMSRI+DVLY D+LA  +  
Sbjct: 304 QKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYTVMSRIEDVLYTDTLALKQTL 363

Query: 473 V 473
           +
Sbjct: 364 L 364

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.6 bits (146), Expect = 1e-09
 Identities = 81/578 (14%), Positives = 161/578 (27%), Gaps = 180/578 (31%)

Query: 64  LEAQRLSFALSRERGP--VSRRIDSVDGPPYCLLPSTPRDRHEAPPLPLP---SPRDRQP 118
           +      F     +    V + ++ V    Y  L S  +     P +        RDR  
Sbjct: 61  VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 119 SDME-------------------LMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAA 159
           +D +                   L++ R AK +L + + G GK              +A 
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW------------VAL 168

Query: 160 SIFGEQRKLEPMPPERKARWRKEINWLLSVTDHIVEFVPSQQKSKEGVSMEIMVT----- 214
            +    +    M          +I W L++             S E V +E++       
Sbjct: 169 DVCLSYKVQCKMD--------FKIFW-LNL---------KNCNSPETV-LEMLQKLLYQI 209

Query: 215 ----RQRNDLHMDIP--------ALRKL-------DAMLIESLDNFGYQNEFWYP----- 250
                 R+D   +I          LR+L       + +L+  L N               
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV--LLN------VQNAKAWNA 261

Query: 251 -------------SGKSDDSEKNVTRHEDKWWIPTVKVPENGLSEEGRRWIQSQKESVNQ 297
                           +D      T H       ++      L+ +         E  + 
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTH------ISLDHHSMTLTPD---------EVKSL 306

Query: 298 VLKA-----------AMAINAQVLSEMEIPESYIE--SLPKNGRASLGDSIYKSI--TVE 342
           +LK             +  N + LS + I ES  +  +   N +    D +   I  ++ 
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLS-I-IAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364

Query: 343 HFDPEQFLAT-MDLSNEHAVLDLKNRIEASI--VIWKRKMHHKDSKSSWGSAVSLEKREL 399
             +P ++      L    +V      I   +  +IW   +   D          L K  L
Sbjct: 365 VLEPAEYRKMFDRL----SVFPPSAHIPTILLSLIWF-DVIKSDVMV---VVNKLHKYSL 416

Query: 400 FEERAETILLLLKQRFPGISQSTLDISKIQYNRDVGQAILESYSRIIESL--AHTVMSRI 457
            E++ +   + +    P I        K++    + ++I++ Y  I ++      +   +
Sbjct: 417 VEKQPKESTISI----PSIYLELK--VKLENEYALHRSIVDHY-NIPKTFDSDDLIPPYL 469

Query: 458 DDVLY--------ADSLAQNKEPVPD--------SPKLEGEDMSDTPNSK---TLSDFMG 498
           D   Y             +                 K+  +  +   +     TL     
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF 529

Query: 499 WDAEESDNNDNLFS--TDNTEKYVKSEHETTNVMSKHM 534
           +     D ND  +    +    ++    E   + SK+ 
Sbjct: 530 YKPYICD-NDPKYERLVNAILDFLPK-IEENLICSKYT 565

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.3 bits (145), Expect = 1e-09
 Identities = 67/522 (12%), Positives = 140/522 (26%), Gaps = 140/522 (26%)

Query: 121 MELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWR 180
           + + ++ F      +D+    K +     LS    +    I            +  +   
Sbjct: 22  LSVFEDAFVDNFDCKDVQDMPKSI-----LSKEEID---HIIMS--------KDAVSGTL 65

Query: 181 KEINWLLSVTDHIVE-FV-------------PSQQKSKEGVSMEIMVTRQRNDLHMDIPA 226
           +    LLS  + +V+ FV             P + + ++   M  M   QR+ L+ D   
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125

Query: 227 LRKLD-------AMLIESLDNFGYQNEFWYPSGKSDDSEKNVTRHED----KWWI----- 270
             K +         L ++L                    KNV         K W+     
Sbjct: 126 FAKYNVSRLQPYLKLRQAL--------------LELRPAKNVLIDGVLGSGKTWVALDVC 171

Query: 271 ---PTVKVPENGLSEEGRRWIQ-SQKESVNQVLKAAMAINAQVLSEMEIPESYIESLP-- 324
                    +  +      W+      S   VL+    +  Q+         +  ++   
Sbjct: 172 LSYKVQCKMDFKIF-----WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR 226

Query: 325 --------------KNGRASLG--DSIYKSITVEHFDPE-QFLATMDLSNEHAVLDLKNR 367
                         K     L    ++  +     F+   + L T         L     
Sbjct: 227 IHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT 286

Query: 368 IEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGISQSTLD-IS 426
              S+      +   + KS     +    ++L  E   T    L      I++S  D ++
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI----IAESIRDGLA 342

Query: 427 KIQYNRDVGQAILESYSRIIES----LAHTVMSRIDDVLYADSLA--QNKEPVP------ 474
                + V     +  + IIES    L      +    ++ D L+       +P      
Sbjct: 343 TWDNWKHVN---CDKLTTIIESSLNVLEPAEYRK----MF-DRLSVFPPSAHIPTILLSL 394

Query: 475 ---DSPKLEGEDMSDT----------PNSKTLS------DFMGWDAEESDNNDNLFSTDN 515
              D  K +   + +           P   T+S      +       E   + ++    N
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN 454

Query: 516 TEKYVKSEHETTNVMSK--------HMLSSAPTKKFSYLEKL 549
             K   S+      + +        H+ +    ++ +    +
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV 496

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	562
2ntx_A	365	EMB|CAB41934.1, prone8; dimer, guanine nucleotide	100.0

>2ntx_A EMB|CAB41934.1, prone8; dimer, guanine nucleotide exchange factor, signaling protein; HET: MSE; 2.20A {Arabidopsis thaliana} PDB: 2nty_A* 2wbl_A

Probab=100.00  E-value=1.5e-195  Score=1446.83  Aligned_cols=359  Identities=77%  Similarity=1.154  Sum_probs=310.4

Q ss_pred             CCCCCChHHHHHHHHHhhhhcCCCCCCCCcchhHHHhhhhhhhhhhhhhccccccCCCChhHHhhhhhccceEeecccee
Q 008528          114 RDRQPSDMELMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQRKLEPMPPERKARWRKEINWLLSVTDHI  193 (562)
Q Consensus       114 ~~~~~se~e~MKErFaKLLLGEDmSG~gkGV~tAlAiSNAITNL~AsvFGe~~rLEPl~~ekK~~WrrEmdwLLsv~d~I  193 (562)
                      ++..++|+||||||||||||||||||||||||||||||||||||||||||||||||||++|||+||||||||||||||||
T Consensus         4 ~~~~~se~e~mKErFaKLLLGEDmSG~gkGV~tAlAiSNAITNL~AsvFGe~~rLEPl~~ekK~~WrrEmdwLLsv~d~I   83 (365)
T 2ntx_A            4 SERQQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQARWKKEIDWLLSVTDHI   83 (365)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTTCTTSSCCSCCHHHHHHHHHHHHHHHHHTTC-CCCCCCHHHHHHHHHHHHHHHGGGGGC
T ss_pred             ccCCchHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHhhhhHHHHHHhhhhhccCCCChHHHHHHHHhcceeeecccee
Confidence            34567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeecccccCCCCceEEEEeeccccccccCchHHHHHHHHHHHHHHhcCCCCeeeeccCCCCCCC-CccccccccccCcc
Q 008528          194 VEFVPSQQKSKEGVSMEIMVTRQRNDLHMDIPALRKLDAMLIESLDNFGYQNEFWYPSGKSDDSE-KNVTRHEDKWWIPT  272 (562)
Q Consensus       194 VElvPs~Q~~~dG~~~EvM~~r~RsDl~~NlPALrKLD~MLle~LDsF~d~tEFWYv~~g~~~~~-~~~~r~eeKWWLP~  272 (562)
                      ||||||+|++|||+++||||||||+|||||||||||||+||||+||||+|+||||||++|+..+. ++.+||++|||||+
T Consensus        84 VE~vPs~Q~~~dG~~~EvM~~r~RsDl~~NlPALrKLD~MLle~LDsf~d~tEFWYv~~g~~~~~~~~~~r~eeKWWLP~  163 (365)
T 2ntx_A           84 VEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLDNFRGHNEFWYVSRDSEEGQQARNDRTNDKWWLPP  163 (365)
T ss_dssp             EEEEEC----------CCEEEEECHHHHTHHHHHHHHHHHHHHHHHGGGSCCCCEEC--------------------CCC
T ss_pred             EEeccccccCCCCceEEEeeccccchhhcCcHHHHHHHHHHHHHHHhCCCCCeeEEecCCCCccccCCcccccccccCCC
Confidence            99999999999999999999999999999999999999999999999999899999999986554 34579999999999


Q ss_pred             ccCCCCCCCHHHHHHHhhhhHHHHHHHHHHHHHhHhhhhcCCCchHHHhhccccCccchhHHHhhhhccCCCChHHHHhh
Q 008528          273 VKVPENGLSEEGRRWIQSQKESVNQVLKAAMAINAQVLSEMEIPESYIESLPKNGRASLGDSIYKSITVEHFDPEQFLAT  352 (562)
Q Consensus       273 pkVP~~GLSe~~RK~L~~qrd~vnQIlKAAmAIN~~vL~EMeiPe~y~esLPKnGrasLGd~iYr~it~d~Fspe~ll~~  352 (562)
                      |||||+||||++||+|||||||||||||||||||++||+|||||++|+|+||||||+||||.|||+||+|+|||||||+|
T Consensus       164 p~VP~~GLSe~~RK~L~~qrd~~~QIlKAAmAIN~~vL~EMeiP~~y~esLPKnGrasLGd~iYr~it~d~Fspe~ll~~  243 (365)
T 2ntx_A          164 VKVPPGGLSEPSRRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEWFDPEQFLAM  243 (365)
T ss_dssp             EECCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHSCSCHHHHHCHHHHHHHTCSSCCHHHHHHT
T ss_pred             CCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhHhHhhcCCCcHHHHHhcccccccccHHHHHHHHhhccCCHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcchhhHHHhhhhhHHHHHHhhhcccCCCCccCcccccchhHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhccc
Q 008528          353 MDLSNEHAVLDLKNRIEASIVIWKRKMHHKDSKSSWGSAVSLEKRELFEERAETILLLLKQRFPGISQSTLDISKIQYNR  432 (562)
Q Consensus       353 ldLssEH~~Le~~nRiEAsi~iWrrK~~~k~~kssW~~~v~~dKre~l~eRAEtlL~~LK~RfPglpQTsLD~sKIQyNk  432 (562)
                      |||||||+|||+||||||||||||||++++++||||+++++.|||++|++|||+||+||||||||||||+||++||||||
T Consensus       244 ldlssEH~~le~anRiEAsi~vWrrk~~~k~~kssW~~~~~~dK~~~l~eRAEtlL~~LKqRfPglpQTsLD~sKIQyNk  323 (365)
T 2ntx_A          244 LDMSTEHKVLDLKNRIEASVVIWKRKLHTKDTKSSWGSAVSLEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQFNK  323 (365)
T ss_dssp             SCCCSHHHHHHHHHHHHHHHHHHHHC--------------CHHHHHHHHHHHHHHHHHHHHHCTTCCCCHHHHHHHHHCC
T ss_pred             ccCccHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccchhHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCCC
Q 008528          433 DVGQAILESYSRIIESLAHTVMSRIDDVLYADSLAQNKEP  472 (562)
Q Consensus       433 DVG~aILESYSRVLesLAf~I~sRIdDVL~~D~~~k~~~~  472 (562)
                      |||||||||||||||||||||++|||||||+|+++++|+.
T Consensus       324 DVG~aILESYSRvLesLAf~I~sRIdDvL~~D~~~~~~~~  363 (365)
T 2ntx_A          324 DVGQAVLESYSRILESLAYTVMSRIEDVLYTDTLALKQTL  363 (365)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCccc
Confidence            9999999999999999999999999999999999998753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00