Citrus Sinensis ID: 008803
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 553 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SHY2 | 688 | Probable metal-nicotianam | yes | no | 0.990 | 0.796 | 0.741 | 0.0 | |
| Q9LUN2 | 714 | Probable metal-nicotianam | no | no | 0.996 | 0.771 | 0.758 | 0.0 | |
| Q6R3K4 | 724 | Probable metal-nicotianam | no | no | 0.996 | 0.761 | 0.757 | 0.0 | |
| Q5JQD7 | 717 | Probable metal-nicotianam | yes | no | 0.992 | 0.765 | 0.723 | 0.0 | |
| Q0J932 | 686 | Probable metal-nicotianam | no | no | 0.994 | 0.801 | 0.699 | 0.0 | |
| Q6H7J6 | 727 | Probable metal-nicotianam | no | no | 0.994 | 0.756 | 0.709 | 0.0 | |
| Q7XKF4 | 724 | Probable metal-nicotianam | no | no | 0.992 | 0.758 | 0.682 | 0.0 | |
| Q7X660 | 712 | Probable metal-nicotianam | no | no | 0.994 | 0.772 | 0.663 | 0.0 | |
| Q0E4J6 | 694 | Probable metal-nicotianam | no | no | 0.992 | 0.791 | 0.585 | 0.0 | |
| Q7XRV2 | 678 | Probable metal-nicotianam | no | no | 0.943 | 0.769 | 0.586 | 0.0 |
| >sp|Q9SHY2|YSL7_ARATH Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana GN=YSL7 PE=2 SV=1 | Back alignment and function desciption |
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Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/553 (74%), Positives = 482/553 (87%), Gaps = 5/553 (0%)
Query: 1 MSDRIALQSEDTN--LGYKNLSLTWIIGFLFVVSFLGLFSVVPLRKVMIIDFKLTYPSGT 58
MSD +A QS + N L KN L W+IGFLFVVSFLGLFSVVPLRK+MI+DFKLTYPSGT
Sbjct: 136 MSDVVAKQSAEANTPLNIKNPHLGWMIGFLFVVSFLGLFSVVPLRKIMIVDFKLTYPSGT 195
Query: 59 ATAYLINSFHTPEGARLAKKQVRTLGKFFSFSFLWGFFQWFFTAGDNCGFVSFPTFGLKA 118
ATA+LINSFHTP+GA+LAKKQVR LGKFFSFSFLWGFFQWFF GD CGF +FPTFGLKA
Sbjct: 196 ATAHLINSFHTPQGAKLAKKQVRALGKFFSFSFLWGFFQWFFATGDGCGFANFPTFGLKA 255
Query: 119 YEYRFYFDFSAIYVGVGMICPYIINISVLLGGILSWGLMWPLIEKRKGDWYSADLSPTSL 178
YE +FYFDFSA YVGVGMICPY+IN+S+L+G ILSWG+MWPLI +KG WY+ADLS TSL
Sbjct: 256 YENKFYFDFSATYVGVGMICPYLINVSLLIGAILSWGVMWPLIGAQKGKWYAADLSSTSL 315
Query: 179 QGLQGYKVFISIALILGDGLYNFCKVLSRTLVGLFYQVRTRNASSDLPVAENSSPETAKL 238
GLQGY+VFI+IA+ILGDGLYNF KVL RT+ GL+ Q + ++ LP+ +++S +
Sbjct: 316 HGLQGYRVFIAIAMILGDGLYNFIKVLGRTVFGLYKQFKNKDV---LPINDHTSTAPVTI 372
Query: 239 SYDDQRRTRLFLKDQIPTWFAISGYVAIAIVSIIVLPHIFHQLKCYHVLVIYLFAPTLAF 298
SYDD+RRT LFLKD+IP+WFA++GYV +AIVSII +PHIFHQLK YH+L++Y+ AP LAF
Sbjct: 373 SYDDKRRTELFLKDRIPSWFAVTGYVVLAIVSIITVPHIFHQLKWYHILIMYIIAPVLAF 432
Query: 299 CNAYGCGLTDWSLASTYGKLAIFTIGAWAGSSHGGVLAGLAACGVMMNIVSTASDLTQDF 358
CNAYGCGLTDWSLASTYGKLAIFTIGAWAG+S+GGVLAGLAACGVMMNIVSTASDL QDF
Sbjct: 433 CNAYGCGLTDWSLASTYGKLAIFTIGAWAGASNGGVLAGLAACGVMMNIVSTASDLMQDF 492
Query: 359 KTGYLTLASPRSMFVSQVIGTAIGCIVSPCVFWLFYKAFDDLGVPGSEYAAPFAMVYRNM 418
KTGY+TLASPRSMF+SQ IGTA+GC++SPCVFWLFYKAF D G PG+ Y AP+A+VYRNM
Sbjct: 493 KTGYMTLASPRSMFLSQAIGTAMGCVISPCVFWLFYKAFPDFGQPGTAYPAPYALVYRNM 552
Query: 419 AKLGVEGFSALPKNCLLLCYVLFGAAIVINLIRDSIRKEWARFIPLPMAMAIPFYLGPYF 478
+ LGVEGFSALPK+CL+LCY+ F AA+++N IRD++ +WARFIPLPMAMAIPFYLG YF
Sbjct: 553 SILGVEGFSALPKHCLMLCYIFFAAAVIVNGIRDALGPKWARFIPLPMAMAIPFYLGGYF 612
Query: 479 AIDMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILALAKVQPPMCMKF 538
IDMC+GSL+LFIW K++K KADA+ AVASGLICG+GIW+LPSSILALA V+ P+CMKF
Sbjct: 613 TIDMCLGSLILFIWRKLNKPKADAYSSAVASGLICGEGIWTLPSSILALAGVKAPICMKF 672
Query: 539 LSRRTNARVDKFL 551
LS +N +VD FL
Sbjct: 673 LSMASNNKVDAFL 685
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May be involved in the transport of nicotianamine-chelated metals. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LUN2|YSL5_ARATH Probable metal-nicotianamine transporter YSL5 OS=Arabidopsis thaliana GN=YSL5 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6R3K4|YSL8_ARATH Probable metal-nicotianamine transporter YSL8 OS=Arabidopsis thaliana GN=YSL8 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q5JQD7|YSL12_ORYSJ Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica GN=YSL12 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q0J932|YSL10_ORYSJ Probable metal-nicotianamine transporter YSL10 OS=Oryza sativa subsp. japonica GN=YSL10 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q6H7J6|YSL14_ORYSJ Probable metal-nicotianamine transporter YSL14 OS=Oryza sativa subsp. japonica GN=YSL14 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7XKF4|YSL13_ORYSJ Probable metal-nicotianamine transporter YSL13 OS=Oryza sativa subsp. japonica GN=YSL13 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q7X660|YSL11_ORYSJ Probable metal-nicotianamine transporter YSL11 OS=Oryza sativa subsp. japonica GN=YSL11 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q0E4J6|YSL8_ORYSJ Probable metal-nicotianamine transporter YSL8 OS=Oryza sativa subsp. japonica GN=YSL8 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7XRV2|YSL6_ORYSJ Probable metal-nicotianamine transporter YSL6 OS=Oryza sativa subsp. japonica GN=YSL6 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 553 | ||||||
| 224149387 | 582 | oligopeptide transporter OPT family [Pop | 0.998 | 0.948 | 0.804 | 0.0 | |
| 224116528 | 668 | oligopeptide transporter OPT family [Pop | 0.996 | 0.824 | 0.803 | 0.0 | |
| 255558132 | 694 | oligopeptide transporter, putative [Rici | 0.998 | 0.795 | 0.802 | 0.0 | |
| 255538056 | 709 | oligopeptide transporter, putative [Rici | 0.998 | 0.778 | 0.776 | 0.0 | |
| 350285877 | 733 | yellow stripe-like protein 5 [Malus xiao | 0.994 | 0.750 | 0.770 | 0.0 | |
| 357499731 | 712 | Yellow stripe-like protein 2.1 [Medicago | 0.994 | 0.772 | 0.766 | 0.0 | |
| 356529418 | 703 | PREDICTED: probable metal-nicotianamine | 0.994 | 0.782 | 0.769 | 0.0 | |
| 356560021 | 702 | PREDICTED: probable metal-nicotianamine | 0.994 | 0.783 | 0.762 | 0.0 | |
| 225423773 | 713 | PREDICTED: probable metal-nicotianamine | 0.990 | 0.768 | 0.764 | 0.0 | |
| 147782998 | 697 | hypothetical protein VITISV_043868 [Viti | 0.990 | 0.786 | 0.764 | 0.0 |
| >gi|224149387|ref|XP_002336800.1| oligopeptide transporter OPT family [Populus trichocarpa] gi|222836925|gb|EEE75318.1| oligopeptide transporter OPT family [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/552 (80%), Positives = 503/552 (91%)
Query: 1 MSDRIALQSEDTNLGYKNLSLTWIIGFLFVVSFLGLFSVVPLRKVMIIDFKLTYPSGTAT 60
MS+ +A QS + +KN SL+W+IGFLFVVSFLGLFSVVPLRKVMI+DFKLTYPSGTAT
Sbjct: 30 MSEAVAKQSTEHTDAFKNPSLSWMIGFLFVVSFLGLFSVVPLRKVMIVDFKLTYPSGTAT 89
Query: 61 AYLINSFHTPEGARLAKKQVRTLGKFFSFSFLWGFFQWFFTAGDNCGFVSFPTFGLKAYE 120
A+LINSFHTP GA+LAKKQV+ LGKFFSFSFLWG FQWF+TAGD CGF SFP+ GLKAYE
Sbjct: 90 AHLINSFHTPAGAKLAKKQVKVLGKFFSFSFLWGVFQWFYTAGDGCGFASFPSLGLKAYE 149
Query: 121 YRFYFDFSAIYVGVGMICPYIINISVLLGGILSWGLMWPLIEKRKGDWYSADLSPTSLQG 180
+F+FDFSA YVGVGMICPYIIN+SVLLGGILSWGLMWPLI+ +KGDWY ADL +SL G
Sbjct: 150 NQFFFDFSATYVGVGMICPYIINVSVLLGGILSWGLMWPLIDTKKGDWYPADLEASSLHG 209
Query: 181 LQGYKVFISIALILGDGLYNFCKVLSRTLVGLFYQVRTRNASSDLPVAENSSPETAKLSY 240
LQGYKVFI+IALILGDGLYNF KVLSRTL LF+Q+R RNA+S+LP+A+ SSPE++K+SY
Sbjct: 210 LQGYKVFIAIALILGDGLYNFFKVLSRTLAALFFQLRVRNATSNLPIADRSSPESSKISY 269
Query: 241 DDQRRTRLFLKDQIPTWFAISGYVAIAIVSIIVLPHIFHQLKCYHVLVIYLFAPTLAFCN 300
D+Q+RTRLFLKDQIPTWF+I+GYVAIA +S LPHIFH+LK Y++LVIY+FAPTLAFCN
Sbjct: 270 DEQQRTRLFLKDQIPTWFSIAGYVAIAAISTATLPHIFHELKWYYILVIYIFAPTLAFCN 329
Query: 301 AYGCGLTDWSLASTYGKLAIFTIGAWAGSSHGGVLAGLAACGVMMNIVSTASDLTQDFKT 360
AYGCGLTDWSLASTYGKLAIF IGAWAG+SHGGVLAGLAACGVMMNIVSTASDL+QDFKT
Sbjct: 330 AYGCGLTDWSLASTYGKLAIFVIGAWAGASHGGVLAGLAACGVMMNIVSTASDLSQDFKT 389
Query: 361 GYLTLASPRSMFVSQVIGTAIGCIVSPCVFWLFYKAFDDLGVPGSEYAAPFAMVYRNMAK 420
GYLTL+SPRSMFVSQ+IGTA+GCI+SP VFWLF+KAF DLG GS+Y AP+A VYRNMA
Sbjct: 390 GYLTLSSPRSMFVSQLIGTAMGCIISPSVFWLFFKAFKDLGTTGSQYPAPYATVYRNMAI 449
Query: 421 LGVEGFSALPKNCLLLCYVLFGAAIVINLIRDSIRKEWARFIPLPMAMAIPFYLGPYFAI 480
LGVEGFSALPKNCL LCY FGAAI+INLI+D++ K+WARFIP PMAMAIPFY+G YFAI
Sbjct: 450 LGVEGFSALPKNCLYLCYGFFGAAILINLIKDALCKKWARFIPNPMAMAIPFYIGSYFAI 509
Query: 481 DMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILALAKVQPPMCMKFLS 540
DMC+GSL+LFIWEKIDK KADAFGPAVASGLICGDGIW+LPSSILALA V+PP+CMKFLS
Sbjct: 510 DMCLGSLILFIWEKIDKVKADAFGPAVASGLICGDGIWTLPSSILALAGVKPPICMKFLS 569
Query: 541 RRTNARVDKFLG 552
R TN++VD FLG
Sbjct: 570 RGTNSKVDAFLG 581
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224116528|ref|XP_002331919.1| oligopeptide transporter OPT family [Populus trichocarpa] gi|222874591|gb|EEF11722.1| oligopeptide transporter OPT family [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255558132|ref|XP_002520094.1| oligopeptide transporter, putative [Ricinus communis] gi|223540722|gb|EEF42283.1| oligopeptide transporter, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|255538056|ref|XP_002510093.1| oligopeptide transporter, putative [Ricinus communis] gi|223550794|gb|EEF52280.1| oligopeptide transporter, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|350285877|gb|AEQ28190.1| yellow stripe-like protein 5 [Malus xiaojinensis] | Back alignment and taxonomy information |
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| >gi|357499731|ref|XP_003620154.1| Yellow stripe-like protein 2.1 [Medicago truncatula] gi|355495169|gb|AES76372.1| Yellow stripe-like protein 2.1 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356529418|ref|XP_003533289.1| PREDICTED: probable metal-nicotianamine transporter YSL7-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356560021|ref|XP_003548294.1| PREDICTED: probable metal-nicotianamine transporter YSL7-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|225423773|ref|XP_002277292.1| PREDICTED: probable metal-nicotianamine transporter YSL7 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147782998|emb|CAN70906.1| hypothetical protein VITISV_043868 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 553 | ||||||
| TAIR|locus:2090502 | 714 | YSL5 "AT3G17650" [Arabidopsis | 0.996 | 0.771 | 0.681 | 8e-211 | |
| TAIR|locus:2007715 | 724 | YSL8 "AT1G48370" [Arabidopsis | 0.996 | 0.761 | 0.682 | 4.6e-208 | |
| TAIR|locus:2018491 | 688 | YSL7 "AT1G65730" [Arabidopsis | 0.990 | 0.796 | 0.656 | 2.4e-202 | |
| TAIR|locus:2168656 | 675 | YSL3 "YELLOW STRIPE like 3" [A | 0.933 | 0.764 | 0.521 | 5.1e-145 | |
| TAIR|locus:2091970 | 676 | YSL6 "AT3G27020" [Arabidopsis | 0.933 | 0.763 | 0.509 | 5.9e-144 | |
| TAIR|locus:2152896 | 664 | YSL2 "AT5G24380" [Arabidopsis | 0.958 | 0.798 | 0.513 | 4.2e-143 | |
| TAIR|locus:2134956 | 673 | YSL1 "YELLOW STRIPE like 1" [A | 0.880 | 0.723 | 0.516 | 1.9e-138 | |
| TAIR|locus:2163036 | 670 | YSL4 "AT5G41000" [Arabidopsis | 0.887 | 0.732 | 0.517 | 1.5e-136 | |
| TAIR|locus:2163508 | 216 | AT5G45450 "AT5G45450" [Arabido | 0.365 | 0.935 | 0.721 | 4.1e-81 | |
| DICTYBASE|DDB_G0291554 | 777 | DDB_G0291554 "Putative oligope | 0.484 | 0.344 | 0.275 | 1.8e-31 |
| TAIR|locus:2090502 YSL5 "AT3G17650" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2038 (722.5 bits), Expect = 8.0e-211, P = 8.0e-211
Identities = 379/556 (68%), Positives = 443/556 (79%)
Query: 1 MSDRIALQSEDTNLGYKNLSLTWIIXXXXXXXXXXXXXXXXXRKVMIIDFKLTYPSGTAT 60
MS+RIA QS D + G K+ SL WII RK+M+IDFKLTYPSGTAT
Sbjct: 155 MSERIATQSGDVSRGVKDPSLGWIIGFLFVVSFLGLFSVVPLRKIMVIDFKLTYPSGTAT 214
Query: 61 AYLINSFHTPEGARLAKKQVRTXXXXXXXXXXXXXXXXXXTAGDNCGFVSFPTFGLKAYE 120
A+LINSFHTP+GA+LAKKQVR T G+NCGF +FPTFGLKAY+
Sbjct: 215 AHLINSFHTPQGAKLAKKQVRVLGKFFSLSFFWSFFQWFFTGGENCGFSNFPTFGLKAYQ 274
Query: 121 YRFYFDFSAIYVGVGMICPYIINISVLLGGILSWGLMWPLIEKRKGDWYSADLSPTSLQG 180
Y+FYFDFSA YVGVGMICPYIINISVLLGGILSWG+MWPLIE +KGDW+ ++ +S+ G
Sbjct: 275 YKFYFDFSATYVGVGMICPYIINISVLLGGILSWGIMWPLIETKKGDWFPDNVPSSSMHG 334
Query: 181 LQGYKVFISIALILGDGLYNFCKVLSRTLVGLFYQVR---TRNASSDLPVAEN--SSPET 235
LQ YKVFI++A+ILGDGLYNFCKVLSRTL GLF Q+R T + + + E+ +SP +
Sbjct: 335 LQAYKVFIAVAIILGDGLYNFCKVLSRTLSGLFVQLRGPTTSISRTSFTLEEDPHASPLS 394
Query: 236 AKLSYDDQRRTRLFLKDQIPTWFAISGYVAIAIVSIIVLPHIFHQLKCYHVLVIYLFAPT 295
K SYDDQRRTR FLKDQIPTWFA+ GY+ IA S +LPH+FHQL+ Y++LVIY+ AP
Sbjct: 395 PKQSYDDQRRTRFFLKDQIPTWFAVGGYITIAATSTAILPHMFHQLRWYYILVIYICAPV 454
Query: 296 LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGSSHXXXXXXXXXXXXMMNIVSTASDLT 355
LAFCNAYG GLTDWSLASTYGKLAIFTIGAWAGS H MMNIVSTASDLT
Sbjct: 455 LAFCNAYGAGLTDWSLASTYGKLAIFTIGAWAGSEHGGMLAGLAACGVMMNIVSTASDLT 514
Query: 356 QDFKTGYLTLASPRSMFVSQVIGTAIGCIVSPCVFWLFYKAFDDLGVPGSEYAAPFAMVY 415
QDFKTGYLTL+SP+SMFVSQVIGTA+GC+VSPCVFWLFYKAFDDLG+P +EY APFA VY
Sbjct: 515 QDFKTGYLTLSSPKSMFVSQVIGTAMGCVVSPCVFWLFYKAFDDLGLPNTEYPAPFATVY 574
Query: 416 RNMAKLGVEGFSALPKNCLLLCYVLFGAAIVINLIRDSIRKEWARFIPLPMAMAIPFYLG 475
R+MAKLGVEG ++LP+ CL+LCY FG AI++N+++DS+ W RFIPLPMAMAIPF+LG
Sbjct: 575 RSMAKLGVEGVASLPRECLVLCYAFFGVAILVNIVKDSLHSNWGRFIPLPMAMAIPFFLG 634
Query: 476 PYFAIDMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILALAKVQPPMC 535
PYFAIDMCVGSL+LFIWE++D AKA+AFG AVASGLICGDGIWSLPSS+LA+A V PP+C
Sbjct: 635 PYFAIDMCVGSLILFIWERVDAAKAEAFGTAVASGLICGDGIWSLPSSVLAIAGVNPPVC 694
Query: 536 MKFLSRRTNARVDKFL 551
MKFLS TN++VD FL
Sbjct: 695 MKFLSSATNSKVDNFL 710
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| TAIR|locus:2007715 YSL8 "AT1G48370" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2018491 YSL7 "AT1G65730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2168656 YSL3 "YELLOW STRIPE like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2091970 YSL6 "AT3G27020" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2152896 YSL2 "AT5G24380" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2134956 YSL1 "YELLOW STRIPE like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163036 YSL4 "AT5G41000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163508 AT5G45450 "AT5G45450" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0291554 DDB_G0291554 "Putative oligopeptide transporter YGL114W" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SHY2 | YSL7_ARATH | No assigned EC number | 0.7414 | 0.9909 | 0.7965 | yes | no |
| Q5JQD7 | YSL12_ORYSJ | No assigned EC number | 0.7230 | 0.9927 | 0.7656 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 553 | |||
| pfam03169 | 619 | pfam03169, OPT, OPT oligopeptide transporter prote | 1e-122 | |
| TIGR00728 | 606 | TIGR00728, OPT_sfam, oligopeptide transporter, OPT | 3e-81 | |
| COG1297 | 624 | COG1297, COG1297, Predicted membrane protein [Func | 3e-26 | |
| TIGR00733 | 591 | TIGR00733, TIGR00733, putative oligopeptide transp | 2e-17 |
| >gnl|CDD|217401 pfam03169, OPT, OPT oligopeptide transporter protein | Back alignment and domain information |
|---|
Score = 371 bits (954), Expect = e-122
Identities = 154/532 (28%), Positives = 238/532 (44%), Gaps = 35/532 (6%)
Query: 17 KNLSLTWIIGFLFVVSFLGLFSVVPLRKVMIIDFKLTYPSGTATAYLINSFHTPEGARLA 76
++ S + I L LG+ PLR+ ++ KL +PSG ATA L+ + HTP G + A
Sbjct: 101 QSFSFGYAILLLLSTQLLGVGFAGPLRRFLVYPPKLPFPSGLATAELLKALHTPGGWKEA 160
Query: 77 KKQVRTLGKFFSFSFLWGFF--QWFFTAGDN----CGFVSFPTFGLKAYEYRFYFDFSAI 130
K +++ F SF++ +F F S PTFGL F FD+SAI
Sbjct: 161 KSRLKFFLIGFVASFVYYWFPFYIFPALSSFSWVCWIAPSNPTFGLLFGGLGFTFDWSAI 220
Query: 131 YVGVGMICPYIINISVLLGGILSWGLMWPLIEKRKGDWYSADLSP---------TSLQGL 181
+G G+I P + +++L+G +LSWG++ PL+ WY+A L + GL
Sbjct: 221 LLGSGLIVPLWVAVNMLIGAVLSWGIIIPLLYYSGNVWYTAYLPIMSNGLFDNTGTSDGL 280
Query: 182 QGYKVFISIALILGDGLYN---FCKVLSRTLVGLFYQVRTRNASSDLPVAENSSPETAKL 238
Y +I +L GLY F + + + + + R + + K
Sbjct: 281 LDYARYIGYGPMLLSGLYALLFFAAITATIVHSILFHGRDIWQAL-------KASRGPKK 333
Query: 239 SYDDQRRTRLFLKDQIPTWFAISGYVAIAIVSIIVLPHIFH-QLKCYHVLVIYLFAPTLA 297
SYDD R + ++P W+ ++G V ++ I ++ +F QL + +L+ L A A
Sbjct: 334 SYDDPHRRLMRKYKEVPMWWYLAGLVLSLVLGIALVAALFPTQLPVWGLLLALLLAFVFA 393
Query: 298 FCNAYGCGLTDWSLASTYGKLAIFTIGAWAGSSHGGVLAGLAACGVMMNIVSTASDLTQD 357
+AY GLT S S G L G LA L GV N + A D QD
Sbjct: 394 IPSAYIAGLTGSSPVSGLGILTELIAGYVLPGR---PLANLIFGGVGYNAAAQAGDFMQD 450
Query: 358 FKTGYLTLASPRSMFVSQVIGTAIGCIVSPCVFWLFYKAFDDLGVPG--SEYAAPFAMVY 415
KTG+ T A PR+ FV+Q+IGT +G +V+P V L +A+ G G AP A
Sbjct: 451 LKTGHYTGAPPRAQFVAQLIGTLVGSVVNPGVLNLLNQAYGCTGAQGDSWTCPAPQAFFS 510
Query: 416 RNMAKLGVEGFSA-LPKNCLLLCYVLFGAAIVINLIRDSIRKEWARFIPLPMAMAIPFYL 474
+A + G LP LL +++ A V++ + K R + A I YL
Sbjct: 511 AAVAWGVIGGKRFGLPYYALLWGFLVGAVAPVLDWLL---HKRLPRSLAFAGAGTIGPYL 567
Query: 475 GPYFAIDMCVGSLLLFIWEKIDKAKADAFGPAVASGLICGDGIWSLPSSILA 526
P + VG L + + KA + +A+GLI G+ + + + L
Sbjct: 568 PPSLTSAILVGGLFNYYVRRRRKAWWRKYNYVLAAGLIAGEALMGVIIAFLV 619
|
The OPT family of oligopeptide transporters is distinct from the ABC pfam00005 and PTR pfam00854 transporter families. OPT transporters were first recognised in fungi (Candida albicans and Schizosaccharomyces pombe), but this alignment also includes orthologues from Arabidopsis thaliana. OPT transporters are thought to have 12-14 transmembrane domains and contain the following motif: SPYxEVRxxVxxxDDP. Length = 619 |
| >gnl|CDD|233105 TIGR00728, OPT_sfam, oligopeptide transporter, OPT superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|224216 COG1297, COG1297, Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|129816 TIGR00733, TIGR00733, putative oligopeptide transporter, OPT family | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 553 | |||
| KOG2262 | 761 | consensus Sexual differentiation process protein I | 100.0 | |
| TIGR00727 | 681 | ISP4_OPT small oligopeptide transporter, OPT famil | 100.0 | |
| PF03169 | 624 | OPT: OPT oligopeptide transporter protein; InterPr | 100.0 | |
| TIGR00728 | 654 | OPT_sfam oligopeptide transporters, OPT superfamil | 100.0 | |
| TIGR00733 | 591 | putative oligopeptide transporter, OPT family. Thi | 100.0 | |
| COG1297 | 624 | Predicted membrane protein [Function unknown] | 100.0 | |
| TIGR00733 | 591 | putative oligopeptide transporter, OPT family. Thi | 92.74 | |
| PF03169 | 624 | OPT: OPT oligopeptide transporter protein; InterPr | 81.42 |
| >KOG2262 consensus Sexual differentiation process protein ISP4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-99 Score=795.21 Aligned_cols=494 Identities=18% Similarity=0.260 Sum_probs=432.7
Q ss_pred cccccccccCChhHHHHHHHHH-------HHHHhhhcccccceeEecCCCCCCcHHHHHHHHHhhCCCcchhhh-hhhHH
Q 008803 10 EDTNLGYKNLSLTWIIGFLFVV-------SFLGLFSVVPLRKVMIIDFKLTYPSGTATAYLINSFHTPEGARLA-KKQVR 81 (553)
Q Consensus 10 ~~~~~~~y~~~~~~~~~~~~~~-------gl~Gl~fa~plRr~lV~~~~l~~P~~la~a~ll~alh~~~~~~~a-~~r~~ 81 (553)
..+|+.||+++++++.++++.+ |++|++ ||++|+|.+|.||++|++++|+|+||++|+++++ .+|+|
T Consensus 167 i~~~k~fY~~~l~f~~~~ll~lttQ~lGyGwAGl~-----Rk~lV~Pa~m~WPsnLvqvsLFraLHeke~~~~g~msR~r 241 (761)
T KOG2262|consen 167 ITAQKAFYKRNLSFGYAFLLVLTTQLLGYGWAGLF-----RKYLVYPASMWWPSNLVQVSLFRALHEKENKSKGNMSRYR 241 (761)
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHHhcccHhhhh-----HhhccCcHhhcCcchhHHHHHHHHHHhhhhhcccCccchh
Confidence 3568899999999999998887 666666 9999999999999999999999999997655444 78999
Q ss_pred HHHHHHHHHHHHHHhhHh-hhc----cccccccc-----------cccccccccccceeeeccc--ccccccccccHHHH
Q 008803 82 TLGKFFSFSFLWGFFQWF-FTA----GDNCGFVS-----------FPTFGLKAYEYRFYFDFSA--IYVGVGMICPYIIN 143 (553)
Q Consensus 82 ~f~~~f~~~fv~~~~p~~-~~~----~~~c~~~~-----------~~~~Gl~~~~~~~~fDws~--~~~G~gli~p~~~~ 143 (553)
||.++|.++|+|+|+|++ |+. .|+||+.. ..|+|+++ ++|||++ +|+|+|+..|+++.
T Consensus 242 FF~ivfv~SFiyY~fPgylF~~Ls~~swvcW~~P~s~~~~qi~sg~~GLGi~~----~tlDW~~IssylgSPLasP~~a~ 317 (761)
T KOG2262|consen 242 FFLIVFVASFIYYWFPGYLFPILSSFSWVCWIWPSSITANQIGSGLTGLGIGP----FTLDWSQISSYLGSPLASPFFAI 317 (761)
T ss_pred hhhHHHHHHHHHHHhhHHHHHHHhhhheeeEeccccHHHHHhccccccccccc----ccccHHHHHHHcCCcchhhHHHH
Confidence 999999999999999986 665 49999832 34667666 7899999 38999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhccCcccCCCCCCCccccc---------------------hhhH----HHHHHHHHHHHHH
Q 008803 144 ISVLLGGILSWGLMWPLIEKRKGDWYSADLSPTSLQGL---------------------QGYK----VFISIALILGDGL 198 (553)
Q Consensus 144 ~~~~~G~vl~~~il~P~l~~~~n~w~~~~~p~~s~~~~---------------------~~y~----~~~~~~~~~~~g~ 198 (553)
+|.++|.++..+|+.|++|| +|.|+.+++|+.|++.+ ++|+ +|+++.+++++|+
T Consensus 318 ~n~~~gfvl~~~IV~Pi~Y~-~n~~~a~~fPI~Ss~lf~~tG~sYnvt~Il~~~f~ld~~~Y~~ysp~yls~~falsygl 396 (761)
T KOG2262|consen 318 ANVFLGFVLFIYIVLPILYW-TNTYDAKYFPIFSSSLFDHTGNSYNVTKILDSKFELDLDKYQEYSPLYLSTFFALSYGL 396 (761)
T ss_pred HHHhhhhhhhhhhhhhhHhh-ccceecceeceecCcceecCCcEeceeeeecCccccchHHHhhcCCcceeHHHHHHHHH
Confidence 99999999999999999987 79999999999876432 2443 7999999999887
Q ss_pred --HHHHHHHHHHH----HHHHHHHHhhccCCCCCccCCCCCcccccccchhhhhhhccCCCCchHHHHHHHHHHHHHHHH
Q 008803 199 --YNFCKVLSRTL----VGLFYQVRTRNASSDLPVAENSSPETAKLSYDDQRRTRLFLKDQIPTWFAISGYVAIAIVSII 272 (553)
Q Consensus 199 --~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~vP~ww~~~~~~~~~~l~~~ 272 (553)
+++.+.+.|++ |++|++.|+...+ ..| .|++-|++|||||.|||.+.++++++++++
T Consensus 397 ~faa~~a~i~Hv~Lf~gkdiw~~~~~~~~k--------~~D---------iHtrlMkkYKeVP~WWf~~ili~s~~l~~~ 459 (761)
T KOG2262|consen 397 GFAALSATIVHVALFNGKDIWQQTKKAFNK--------KMD---------IHTRLMKKYKEVPDWWFLAILIVSLGLGLA 459 (761)
T ss_pred HHHHHHHHhhhheeeccHHHHHHHHhcccc--------CCC---------HHHHHHHHhccCcHHHHHHHHHHHHHHHhh
Confidence 35566777865 8899888765421 123 344445579999999999999999999999
Q ss_pred Hhccccc--chhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhhhHHHHHhhhhccCCCChhHHHHHHHHHHHHHHHH
Q 008803 273 VLPHIFH--QLKCYHVLVIYLFAPTLAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGSSHGGVLAGLAACGVMMNIVST 350 (553)
Q Consensus 273 ~~~~~~~--~lp~w~~iva~~l~~v~~~~~~~~~g~tg~~~~~~~~~i~~li~g~~~~~~~g~~~a~l~~~~~~~~~~~q 350 (553)
+++.+++ |+|||++++|+++++++++|.+.+.|+||++|+ +|+++|+|.||+.| |+|+|||.||.||++++.|
T Consensus 460 ~~~~~~~~~q~PwWg~~va~~ia~vf~iPigii~AtTNq~~G--LNiitE~i~Gy~~P---grPiAn~~FK~yGyism~Q 534 (761)
T KOG2262|consen 460 ACEGYKTQVQLPWWGLLVACAIAFVFTIPIGIIQATTNQTPG--LNIITEYIIGYIYP---GRPIANLCFKTYGYISMTQ 534 (761)
T ss_pred heeeecccccCchHHHHHHHHHHHHHhccHHHhhhhccCCcc--HHHHHHHHHHhhcC---CchHHHHHHHHhchhhHHH
Confidence 9999988 899999999999999999999999999999999 99999999999996 9999999999999999999
Q ss_pred HHHhhhhhhhhhhcCCChhHHHHHHhHhhhhhhhhHHHHHHHHHhhcCCCCC--CCCCCCCchHHHHHHHHHh-hccCCC
Q 008803 351 ASDLTQDFKTGYLTLASPRSMFVSQVIGTAIGCIVSPCVFWLFYKAFDDLGV--PGSEYAAPFAMVYRNMAKL-GVEGFS 427 (553)
Q Consensus 351 A~~~~~DLK~G~y~~~pPr~~f~aQiiGtivg~~v~~~v~~~~~~~~~~i~~--~~~~~~~P~a~~~~s~a~~-g~~G~~ 427 (553)
|.+++||+|+|||||+|||.||.+|++||+++++|+.+|..|++.++|++|+ +++.||||..++++++|++ |++||+
T Consensus 535 al~f~~DlKlghYMKIPPR~mF~~Q~v~tivs~~Vn~gv~~W~m~~I~~iC~~~~~s~~TCP~~rvffnASvIWGlIGP~ 614 (761)
T KOG2262|consen 535 ALTFLQDLKLGHYMKIPPRSMFAVQLVGTIVAGFVNLGVAWWLMYSIPNICTTDQNSPWTCPSDRVFFNASVIWGLIGPK 614 (761)
T ss_pred HHHHHhhccceeeecCChHHHHHHHHHHHHhheeeeHHhHHHHHhcccccccCCCCCCccCCCCceEEeceeeeecccch
Confidence 9999999999999999999999999999999999999999999999999997 4579999999999999999 999999
Q ss_pred CCchh---hHHHHHHHHHHHH----HHHHHHhhhhcc-hhhhcchhhhhccccccchhhHHHHHHHHHHHH----HHHhc
Q 008803 428 ALPKN---CLLLCYVLFGAAI----VINLIRDSIRKE-WARFIPLPMAMAIPFYLGPYFAIDMCVGSLLLF----IWEKI 495 (553)
Q Consensus 428 ~l~~~---~~~~~~~~~~~g~----~~~ll~~~~p~~-~~~~v~~p~~~~~~~~lp~~~~~~~~~G~~i~~----~~~r~ 495 (553)
|+|.. |..+.+ ++++|+ ++|+++|++|++ |.+++|.|+.+++...+||++..++..|.++++ +.+||
T Consensus 615 riF~~~g~Y~~l~w-FFLiGa~~pv~vw~~~k~fPk~~w~~~i~~pvl~gg~~~mPpat~vny~sw~iv~fifny~i~r~ 693 (761)
T KOG2262|consen 615 RIFGSLGIYPGLNW-FFLIGALAPVLVWLLQKKFPKKKWIKQINPPVLFGGTANMPPATAVNYTSWAIVGFIFNYYIFRY 693 (761)
T ss_pred hhcCCCCccCcchH-HHHHHHHhhHHHHHHHHhcchhhhhhccCcceEecccccCCCccccchhHHHHHHHHHHHHHHHH
Confidence 99952 544544 334444 489999999986 578899999999999999987766665555554 45788
Q ss_pred cchhhhhhhHHHhhhhhhhhHhhHHHHH-HHHhcCCCCCccee
Q 008803 496 DKAKADAFGPAVASGLICGDGIWSLPSS-ILALAKVQPPMCMK 537 (553)
Q Consensus 496 ~~~~~~ky~~~laagLiaG~al~gviia-~l~~~gv~~~~~~~ 537 (553)
++.||+||||++|||||||.+++|++++ +++..|++.+ ||-
T Consensus 694 ~~~WW~kYNyvLsaaldaG~a~~~vliffcv~~~~~~~~-WWG 735 (761)
T KOG2262|consen 694 RRSWWQKYNYVLSAALDAGVAFMGVLIFFCVQYPGISLN-WWG 735 (761)
T ss_pred HHHHHHHhhhHhhhhcccchhHHHhHhhheeccCCCccc-ccc
Confidence 9999999999999999999999999999 8999999997 883
|
|
| >TIGR00727 ISP4_OPT small oligopeptide transporter, OPT family | Back alignment and domain information |
|---|
| >PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast | Back alignment and domain information |
|---|
| >TIGR00728 OPT_sfam oligopeptide transporters, OPT superfamily | Back alignment and domain information |
|---|
| >TIGR00733 putative oligopeptide transporter, OPT family | Back alignment and domain information |
|---|
| >COG1297 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00733 putative oligopeptide transporter, OPT family | Back alignment and domain information |
|---|
| >PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00