Citrus Sinensis ID: 008837

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-
Protein Sequence
MASVSSEDGLEEMSERFESYSLSADVSESESSSSGSFSNRHFDSASTFLTSSSLVEPDFDDSSGSSEEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAAAETASLYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSFYSLVRSPRGRAHSLLDQSDLRARIDGALEKLTF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccEEEEEccEEEEEcccccccccccEEEEEEEccccccccccHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccccccccccccccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHccccccccHHHHHHHHcccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcHHcHEEEEcccccccccccEEEEEccccccHHHEcHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccccccccccccccccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccccHHHHHHHHHcHccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHcHHccHHHHHHHHHHHHHHHHHHHHHccccccccEcHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcc
Coil and Loop (DISEMBL)
masvssedgLEEMSERFESYslsadvsesessssgsfsnrhfdsastfltssslvepdfddssgsseevpimlpvvgGRHVVVsvndtekipdsdlSEIELMKERFAKLLlgedmsgggkGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELipslqefpgggtfevmvtrprsdlyvnlpalkKLDTMLVNILEGFreaefcyvdrglivggggddtktfpscssssrpfagpeekwwlpfpmvppnglsENMRERLQQARECTSQILKAAMAINSNVLaemeipnayleslpksgkECLGEIMYNyitadqfspeSLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRiirtksgrsswggkvkgFVSDIERSKLLAHRADTILQNLklrfpslpqtaldmnkiqynKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAAAETASLydqtrfngtipkqkrilpspfslqrssstspfripsfyslvrsprgrahslldqSDLRARIDGALEKLTF
Flexible Loop (DISEMBL)
masvssedgleEMSERFESYSLSADVSESESSSSGSFSNRHFDSASTFLTSSSLVEPDFDDSSGSSEEVPIMLPVVGGRHVVVsvndtekipdsdlseiELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWrqkyqnkriirtksgrsswggkvkGFVSDIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAAAetaslydqtrfngtipkqkrilpspfslqrssstspfRIPSFyslvrsprgrahslldqsdlraridgalekltf
Low Complexity Region (SEG)
MASVSSEDGLEEMSERFesyslsadvsesessssgsfsNRHFDSASTFLTSSSLVEPDFDDSSGSSEEVPIMLPvvggrhvvvsvNDTEKIPDSDLSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAAAETASLYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSFYSLVRSPRGRAHSLLDQSDLRARIDGALEKLTF
Disordered region (IsUnstruct)
*********************************************************************PIMLPVVGGRHVVVSVNDTEKI****LSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIV*************************KWWLPFPM*******************CTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAA***ASLYD********************************************************************
Disordered Region (DISOPRED)
*****S*******************************************************************************************************************VCTALAISNAITNLSASVFGELWKLEPLALR***MWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRG****************************KWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIW**************************VSDIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDA***************************************************************************ALEKLT*
Disordered Region (DISEMBL)
***************************************RHFDSASTFLTSSSLVE**********EEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGDDTKT************GPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAAAETASLYDQTRFNGTIPKQKRILPSP*********SPFRIPSFYSLVRSPRGRAHSLLDQSDLRARIDGALEKLTF
Disordered Region (DISPRO)
**********************************************************************************************DLSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRG**************************EEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQN****************VKGFVSDIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQ*********************************************************************IDGALEKLTF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASVSSEDGLEEMSERFESYSLSADVSESESSSSGSFSNRHFDSASTFLTSSSLVEPDFDDSSGSSEEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAAAETASLYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSFYSLVRSPRGRAHSLLDQSDLRARIDGALEKLTF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	551	2.2.26 [Sep-21-2011]
Q93ZY2	548	Rop guanine nucleotide ex	yes	no	0.911	0.916	0.624	1e-176
Q9LQ89	485	Rop guanine nucleotide ex	no	no	0.760	0.863	0.475	1e-105
Q9LV40	523	Rho guanine nucleotide ex	no	no	0.651	0.686	0.505	1e-104

>sp|Q93ZY2|ROGF1_ARATH Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana GN=ROPGEF1 PE=1 SV=2

 Score =  618 bits (1593), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 329/527 (62%), Positives = 394/527 (74%), Gaps = 25/527 (4%)

Query: 1   MASVSSEDGLEEMSERFESYSLSADVSESESSSSGSFSNRHFDSASTFLTSSSLVEPDFD 60
           M S+SSE+  E  SER  SYS SAD+SESESSSS S      + AS+ + SS    P   
Sbjct: 1   MGSLSSEEDDEVSSERCGSYSPSADISESESSSSFSCHRFDGEGASSSIPSS----PRVV 56

Query: 61  DSSGSSEEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGEDMSGGGK 120
              G     P+MLPV+GG+ VV      +K PD+DLSEIE+MKERFAKLLLGEDMSGGGK
Sbjct: 57  AGRGFYFPAPVMLPVIGGKDVVWD----DKQPDNDLSEIEMMKERFAKLLLGEDMSGGGK 112

Query: 121 GVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQE 180
           GVCTALAISNAITNLSA+VFGELW+LEPLA +KK MW+RE+EWLLCVSDSIVELIPS+Q+
Sbjct: 113 GVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRRELEWLLCVSDSIVELIPSIQQ 172

Query: 181 FPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGDDT 240
           FPGGGT+E+M TRPRSDLY NLPALKKLD ML+++L+ F + EF Y DRG+++G    D+
Sbjct: 173 FPGGGTYEIMETRPRSDLYANLPALKKLDAMLIDMLDAFSDTEFWYTDRGIVLGDCDKDS 232

Query: 241 KTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSN 300
              P+           E+KWWLP P VPPNGLSE  R++LQQ R+  +QILKAA+AINS 
Sbjct: 233 YNSPASVRQ-------EDKWWLPCPKVPPNGLSEEARKKLQQCRDFANQILKAALAINSG 285

Query: 301 VLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANRI 360
           VLAEMEIP+ YLE+LPKSGKECLGEI+Y Y+TA++FSPE LL  LDLSSE+ TLEIANRI
Sbjct: 286 VLAEMEIPDPYLETLPKSGKECLGEIIYQYLTANKFSPECLLDCLDLSSEHQTLEIANRI 345

Query: 361 EAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNLKLRFPS 420
           EAAVH+WRQK   +   + K   SSWGGKVKG V+D ER+  L  RA+T+LQ+L++RFP 
Sbjct: 346 EAAVHVWRQKNGRRHKKQAKLKLSSWGGKVKGLVNDNERNDFLVQRAETLLQSLRIRFPG 405

Query: 421 LPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQR-AAAETA 479
           LPQT LDMNKIQYNKDVGQSILESYSRVMES+AFNI ARIDD+LYVDDA ++  +  E+ 
Sbjct: 406 LPQTTLDMNKIQYNKDVGQSILESYSRVMESMAFNITARIDDVLYVDDAMRRSISVTESL 465

Query: 480 SLYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSFYSLVRSPR 526
           SL+     NG  P++       FS+Q S   SPF  P+     RSPR
Sbjct: 466 SLFS---INGLNPQKA------FSVQSSPHGSPFATPALSVASRSPR 503

Acts as an activator of Rop GTPases by exchanging GDP with GTP. Stimulates Rop1 to control polarized pollen tube growth.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQ89|ROGF2_ARATH Rop guanine nucleotide exchange factor 2 OS=Arabidopsis thaliana GN=ROPGEF2 PE=1 SV=2

 Score =  382 bits (980), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 211/444 (47%), Positives = 294/444 (66%), Gaps = 25/444 (5%)

Query: 32  SSSGSFSNRHFDSASTFLTSSSLVE-PDFDDSSGS-SEEVPIMLPVVGGRHVVVSVNDTE 89
           +S G FS++  D  S+F T +S  + P   +S+ S S   P +  +   +H  +  ++  
Sbjct: 52  TSGGGFSDQ-IDETSSFCTEASPSDWPVLTESNNSASSNFPTVFDL---KHNQIETDEHL 107

Query: 90  KIPDSDLSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPL 149
            + +    E+E MKERF+KLLLGEDMSG GKGVCTA+ ISNAITNL A+VFG+  +LEPL
Sbjct: 108 AVQEISEPELETMKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPL 167

Query: 150 ALRKKMMWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLD 209
            + +K  W+REM  LL V D I E IP  Q    G T EVM +RPR+D+Y+NLPAL+KLD
Sbjct: 168 EIEQKTTWKREMNCLLSVCDYIFEFIPKSQNLSNGATVEVMESRPRADIYINLPALRKLD 227

Query: 210 TMLVNILEGFREAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRP--FAGPEEKWWLPFPMV 267
           +ML+  L+ F++ EF Y + G +        K+  S + S R       EEKWWLP P+V
Sbjct: 228 SMLMEALDSFQKTEFWYAEEGSL------SMKSTRSATGSFRKVIVQRKEEKWWLPIPLV 281

Query: 268 PPNGLSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIM 327
           P  GLSE  R++L+  RE T+QI KAAMAINS++L EM+IP++Y+ +LPKSGK   G+ +
Sbjct: 282 PLQGLSEKARKQLKSKRESTNQIHKAAMAINSSILGEMDIPDSYMATLPKSGKASTGDAI 341

Query: 328 YNYITAD-QFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSW 386
           Y ++T+  +FSPE LL  L + SE+  L++A+R+EA+++ WR+K          + +SSW
Sbjct: 342 YRHMTSSGRFSPEKLLDRLKIVSEHEALQLADRVEASMYTWRRK------ACLNNSKSSW 395

Query: 387 GGKVKGFVSDIERSK---LLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILE 443
              VK  +S  ERS    +LA RA+++L  LK R+P L QT+LD+ KI  NKDVG+++LE
Sbjct: 396 -NMVKDLMSITERSDKNYVLAERAESLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLE 454

Query: 444 SYSRVMESLAFNIMARIDDLLYVD 467
           SYSRV+E LAFNI+A IDD+LYVD
Sbjct: 455 SYSRVLEGLAFNIVAWIDDVLYVD 478

Acts as an activator of Rop GTPases by exchanging GDP with GTP.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LV40|ROGF8_ARATH Rho guanine nucleotide exchange factor 8 OS=Arabidopsis thaliana GN=ROPGEF8 PE=1 SV=1

 Score =  379 bits (973), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/386 (50%), Positives = 265/386 (68%), Gaps = 27/386 (6%)

Query: 97  SEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMM 156
           +++E+MK+RFAKLLLGEDMSGGGKGV +ALA+SNAITNL+AS+FGE  KL+P+   ++  
Sbjct: 84  ADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQAR 143

Query: 157 WQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNIL 216
           W++E++WLL V+D IVE +PS Q    G   E+MVTR R DL +N+PAL+KLD ML++ L
Sbjct: 144 WKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTL 203

Query: 217 EGFR-EAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSEN 275
           + FR   EF YV R    G    + +T               +KWWLP   VPP GLSE 
Sbjct: 204 DNFRGHNEFWYVSRDSEEGQQARNDRT--------------NDKWWLPPVKVPPGGLSEP 249

Query: 276 MRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQ 335
            R  L   ++  +Q+ KAAMAIN+ VL+EMEIP +Y++SLPK+G+  LG+ +Y  IT + 
Sbjct: 250 SRRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEW 309

Query: 336 FSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVS 395
           F PE  LA LD+S+E+  L++ NRIEA+V IW      KR + TK  +SSWG  V     
Sbjct: 310 FDPEQFLAMLDMSTEHKVLDLKNRIEASVVIW------KRKLHTKDTKSSWGSAVS---- 359

Query: 396 DIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFN 455
            +E+ +L   RA+TIL  LK +FP LPQ++LD++KIQ+NKDVGQ++LESYSR++ESLA+ 
Sbjct: 360 -LEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYT 418

Query: 456 IMARIDDLLYVDD-ATKQRAAAETAS 480
           +M+RI+D+LY D  A KQ   AE  S
Sbjct: 419 VMSRIEDVLYTDTLALKQTLLAEETS 444

Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop GTPases by exchanging GDP with GTP. Active as homodimer.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	551
224061935	552	predicted protein [Populus trichocarpa]	0.990	0.989	0.671	0.0
224085972	474	predicted protein [Populus trichocarpa]	0.849	0.987	0.721	0.0
147780615	532	hypothetical protein VITISV_031848 [Viti	0.934	0.968	0.674	0.0
224080678	576	predicted protein [Populus trichocarpa]	0.929	0.888	0.659	0.0
225428257	587	PREDICTED: rop guanine nucleotide exchan	0.938	0.880	0.678	0.0
225459797	532	PREDICTED: rop guanine nucleotide exchan	0.934	0.968	0.676	0.0
224103115	577	predicted protein [Populus trichocarpa]	0.934	0.892	0.662	0.0
255575043	580	Rop guanine nucleotide exchange factor,	0.972	0.924	0.643	0.0
356544030	562	PREDICTED: rop guanine nucleotide exchan	0.905	0.887	0.660	0.0
356538528	566	PREDICTED: rop guanine nucleotide exchan	0.912	0.888	0.653	0.0

>gi|224061935|ref|XP_002300672.1| predicted protein [Populus trichocarpa] gi|222842398|gb|EEE79945.1| predicted protein [Populus trichocarpa]

 Score =  700 bits (1807), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/557 (67%), Positives = 430/557 (77%), Gaps = 11/557 (1%)

Query: 1   MASVSSEDGLEEMSERFE--SYSLSADVSESESSSS-GSFSNRHFD---SASTFLTSSSL 54
           M  VSSED ++++SERFE  SY  SADVS SES +S  SFS R +D    AST  TSS+ 
Sbjct: 1   MGDVSSEDWIDQVSERFELDSYCSSADVSGSESDTSISSFSCRRYDVQGGASTSFTSST- 59

Query: 55  VEPDFDDSSGSSEEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGED 114
             PDF  +S  S  +P+MLPV GGR+V +     EK  +SDLSEIELM+ERFAKLLLGED
Sbjct: 60  --PDFAGNSAYSAPLPVMLPVSGGRYVAIPEEKEEKP-ESDLSEIELMRERFAKLLLGED 116

Query: 115 MSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVEL 174
           MSGGG+G CTA AISNAITNLSASVFGELWKLEPLA +KK MW+REMEWLLCVSDSIVEL
Sbjct: 117 MSGGGQGTCTAAAISNAITNLSASVFGELWKLEPLAPQKKAMWKREMEWLLCVSDSIVEL 176

Query: 175 IPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVG 234
           +PS+QEFPGGGT+EVMV +PRSDLYVNLPALKKLD ML++IL+ F E EF YVDRG++V 
Sbjct: 177 VPSMQEFPGGGTYEVMVAQPRSDLYVNLPALKKLDAMLISILDLFSEPEFYYVDRGIVVA 236

Query: 235 GGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAA 294
           G  D  + FP  SS  RP    E KWWLPFP VPPNGLSE + +RLQQ RECTSQILKAA
Sbjct: 237 GD-DVIEEFPVPSSLRRPPIRQEGKWWLPFPKVPPNGLSEELTKRLQQCRECTSQILKAA 295

Query: 295 MAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTL 354
           MAINS+VLAEMEIP+ Y E+LPKSGK CLG IMY YITA  FSP+ LL YLD+SSEYTTL
Sbjct: 296 MAINSSVLAEMEIPDTYFENLPKSGKACLGRIMYRYITAKHFSPDYLLDYLDVSSEYTTL 355

Query: 355 EIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNL 414
           EIANRIEAA H W +KY N+ + R + GRSSWGGKVKGFV + ++ KLLA RA+ ++ NL
Sbjct: 356 EIANRIEAASHFWSEKYLNRYLGRARDGRSSWGGKVKGFVGETQKRKLLAKRAEILIHNL 415

Query: 415 KLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRA 474
           +LRFP LPQTALD NKIQYNKDVG +I+ESYSRVMESLAFNIMARIDDLLYVDDATKQRA
Sbjct: 416 RLRFPGLPQTALDANKIQYNKDVGYAIIESYSRVMESLAFNIMARIDDLLYVDDATKQRA 475

Query: 475 AAETASLYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSFYSLVRSPRGRAHSLLD 534
            AE+ S   Q +F+    KQK I  S  S Q SSS+S     S   ++R P GR H  L 
Sbjct: 476 TAESVSPCVQGKFSSRPSKQKSISSSHVSFQHSSSSSMPTAGSSGEVIRIPNGRKHHSLK 535

Query: 535 QSDLRARIDGALEKLTF 551
           +S+LR  +D  LEKLTF
Sbjct: 536 KSNLRDSLDQTLEKLTF 552

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085972|ref|XP_002307760.1| predicted protein [Populus trichocarpa] gi|222857209|gb|EEE94756.1| predicted protein [Populus trichocarpa]

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/478 (72%), Positives = 399/478 (83%), Gaps = 10/478 (2%)

Query: 1   MASVSSEDGLEEMSERFE--SYSLSADVSESES-SSSGSFSNRHFD---SASTFLTSSSL 54
           M SVSSED L+++SERFE  SYSLSADVS SES ++S SFS R +D    AST  TSS+ 
Sbjct: 1   MGSVSSEDWLDQVSERFELDSYSLSADVSGSESDTASSSFSCRRYDLQGGASTSFTSST- 59

Query: 55  VEPDFDDSSGSSEEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGED 114
             PDF  +S S   +P+MLPVVG RHV  S ++ E+ P++DLSEI LMKERFAKLLLGED
Sbjct: 60  --PDFAGNSVSPLPLPVMLPVVGDRHVAASPDEMEEKPETDLSEIALMKERFAKLLLGED 117

Query: 115 MSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVEL 174
           MSGGG+GVCTA+AISNAITNLSASVFGELW+LEPLA ++K+MWQREMEWLLC+SDSIVEL
Sbjct: 118 MSGGGQGVCTAVAISNAITNLSASVFGELWRLEPLAPQRKVMWQREMEWLLCISDSIVEL 177

Query: 175 IPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVG 234
           +PS+QEFPGGGT+EVMV RPRSDLYVNLPALKKLD ML++IL+ F E+EF YVDRG++V 
Sbjct: 178 VPSMQEFPGGGTYEVMVPRPRSDLYVNLPALKKLDAMLISILDLFSESEFWYVDRGIVVA 237

Query: 235 GGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAA 294
           G  DD +  P  SS  RP    EEKWWLPFP VP  GLSE+ R++LQQ RECTSQILKAA
Sbjct: 238 GD-DDVEELPMSSSLRRPSIRQEEKWWLPFPKVPLAGLSEDTRKKLQQCRECTSQILKAA 296

Query: 295 MAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTL 354
           +AIN++VLAEMEIP+ Y ESLPKSGK CLG IMY+YITA  FSP+ LL YLDLSSEYTTL
Sbjct: 297 LAINNSVLAEMEIPDTYFESLPKSGKACLGRIMYHYITAKHFSPDYLLDYLDLSSEYTTL 356

Query: 355 EIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNL 414
           EIANRIEAA H W Q YQNK +IR ++G+SSW GKVKGFV +I + KLLA RA+ ++ NL
Sbjct: 357 EIANRIEAATHFWSQSYQNKHLIRARNGKSSWSGKVKGFVGEIPKRKLLAKRAEVLIHNL 416

Query: 415 KLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQ 472
           +LRFP LPQTALD+NKIQYNKDVG +I+ESYSRVMESLAFNIMARIDDLLYVDDATKQ
Sbjct: 417 RLRFPGLPQTALDVNKIQYNKDVGHAIMESYSRVMESLAFNIMARIDDLLYVDDATKQ 474

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147780615|emb|CAN69121.1| hypothetical protein VITISV_031848 [Vitis vinifera]

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/522 (67%), Positives = 406/522 (77%), Gaps = 7/522 (1%)

Query: 1   MASVSSEDGLEEMSERFESYSLSADVSESESSSSGSFSNRHFDS-ASTFLTSSSLVEPDF 59
           M + SSE+  +E SER ESYSLSADVSE ES S  S     +   A + L  S LV P+ 
Sbjct: 1   MGNGSSEEEFDERSERLESYSLSADVSECESLSGFSCDGDGYGGGAVSSLNYSPLVRPEV 60

Query: 60  DDSSGSSEEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGEDMSGGG 119
             +S      P+  PV GG HVV+      + P+ +LSE+EL+KERFAKLLLGEDMSGGG
Sbjct: 61  AVNSSFRAPPPLTSPVFGGGHVVI----PPRKPEKELSEVELIKERFAKLLLGEDMSGGG 116

Query: 120 KGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQ 179
           KG+ TALAISNAITNLSA+VFGELWKLEPLA  KK+MW REMEWLLCVSDSIVELIPS+Q
Sbjct: 117 KGISTALAISNAITNLSATVFGELWKLEPLAPEKKLMWHREMEWLLCVSDSIVELIPSVQ 176

Query: 180 EFPGG-GTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGD 238
           EFPGG GTFEVMVTRPRSDLY+NLPALKK+D ML+++L+ F ++EF YVDRG+IV G  D
Sbjct: 177 EFPGGEGTFEVMVTRPRSDLYINLPALKKVDAMLLSMLDDFSDSEFYYVDRGVIVSGA-D 235

Query: 239 DTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAIN 298
           + +     S S RP    EEKWWLPFP VPPNGLSE++  RLQQ +E T+QILKAAMAIN
Sbjct: 236 NCERHSLSSPSGRPSIRQEEKWWLPFPRVPPNGLSESVTNRLQQCKEWTNQILKAAMAIN 295

Query: 299 SNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIAN 358
           S+VLAEMEIP+ YL+SLPKSGK CLGE +Y  ITA QFSPE LL YLDLSSEYTTLEIAN
Sbjct: 296 SSVLAEMEIPDVYLDSLPKSGKACLGETIYRSITARQFSPECLLDYLDLSSEYTTLEIAN 355

Query: 359 RIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNLKLRF 418
           RIEAA+HIWRQKY  +    TK+GRSSWGGKVK  V  +E++KLLA RA+TILQNL+LRF
Sbjct: 356 RIEAAIHIWRQKYLKRHTNHTKAGRSSWGGKVKVLVGYMEKNKLLAQRAETILQNLRLRF 415

Query: 419 PSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAAAET 478
           P LPQTALDM KIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLY+DDATK RA AE 
Sbjct: 416 PGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYIDDATKFRAVAEP 475

Query: 479 ASLYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSFYS 520
            SL+ Q  +      +++ILPSPFS+Q +S  S    P+ YS
Sbjct: 476 ISLFKQDGYGDGCXLRRQILPSPFSIQNTSYVSQITAPASYS 517

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080678|ref|XP_002306208.1| predicted protein [Populus trichocarpa] gi|222849172|gb|EEE86719.1| predicted protein [Populus trichocarpa]

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/526 (65%), Positives = 417/526 (79%), Gaps = 14/526 (2%)

Query: 1   MASVSSEDGLEEMSERFESYSLSADVSESESSSSGSFS------NRHFDSASTFLTSSSL 54
           M SVSS+D     SER  SYSLSADVSESES +S S         R   + S+ +TSS  
Sbjct: 1   MGSVSSDDD-GGGSERCGSYSLSADVSESESCTSTSSFSCRRGFGRDGGAVSSSMTSSPR 59

Query: 55  VEPDFDDSSGSSEEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGED 114
             P      G     P+M+PV+GG+ VVV  +  EK  D+DLSE+E+MKERFAKLLLGED
Sbjct: 60  PLP-----GGFCFPAPVMVPVIGGKDVVVWDSKNEKRGDADLSEVEMMKERFAKLLLGED 114

Query: 115 MSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVEL 174
           MSGGGKGVCTALAISNAITNLSA+VFGELW+LEPLAL+KK MW+REMEWLLCVSDSIVEL
Sbjct: 115 MSGGGKGVCTALAISNAITNLSATVFGELWRLEPLALQKKSMWKREMEWLLCVSDSIVEL 174

Query: 175 IPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVG 234
           +PS+Q+FPGGGT+EVM TRPRSDLYVNLPALKKLD ML+ +L+GF E EF Y DRG++VG
Sbjct: 175 VPSIQQFPGGGTYEVMATRPRSDLYVNLPALKKLDAMLITMLDGFSETEFWYADRGIVVG 234

Query: 235 GGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAA 294
            GGD   T+PS  S  RP    E+KWWLP P VPP+GLSE+ R+RLQQ R+CT+QILKAA
Sbjct: 235 DGGD-CDTYPSGISGGRPSIRQEDKWWLPCPKVPPDGLSEDARKRLQQCRDCTNQILKAA 293

Query: 295 MAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTL 354
           MAINS+VL EMEIP AY+E+LPK+GK CLG+I+Y YITA++FSPE LL  LDLS+E+ TL
Sbjct: 294 MAINSSVLVEMEIPTAYMETLPKNGKACLGDIIYRYITAEKFSPECLLDCLDLSTEHHTL 353

Query: 355 EIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNL 414
           EIANR+EAAVHIW+QK   K I       SSWGGKVKGFV+D  ++++LA RA+T+LQ+L
Sbjct: 354 EIANRVEAAVHIWKQKDHRKHIHNKNIKHSSWGGKVKGFVADTHKNQILAQRAETLLQSL 413

Query: 415 KLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRA 474
           +LR+P LPQTALDMNKIQYNKDVGQSILESYSRV ESLAFNIMARIDD+L+VDDATKQ A
Sbjct: 414 RLRYPGLPQTALDMNKIQYNKDVGQSILESYSRVTESLAFNIMARIDDVLFVDDATKQCA 473

Query: 475 AAETASLYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSFYS 520
           AAE+ SL+++    G  P QKR+ PSPFS+++S   SP+  P++++
Sbjct: 474 AAESISLFNRGGLGGH-PIQKRMSPSPFSIKQSPFASPYGTPTYFA 518

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428257|ref|XP_002282312.1| PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis vinifera] gi|297744497|emb|CBI37759.3| unnamed protein product [Vitis vinifera]

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/520 (67%), Positives = 417/520 (80%), Gaps = 3/520 (0%)

Query: 1   MASVSSEDGLEEMSERFESYSLSADVSESESSSSGSFSNRHFDSASTFLTSSSLVEPDFD 60
           M SVSSE+G+++ S+R  SYSLSADVSESES SS S      + AS+ +TSS L      
Sbjct: 1   MGSVSSEEGVDDQSDRCGSYSLSADVSESESCSSFSCRRYDGEGASSSMTSSPLACRPVV 60

Query: 61  DSSGSSEEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGEDMSGGGK 120
            +S      P+MLPV+GGR VVV     EK  ++DLSE E+MKERFAKLLLGEDMSGGGK
Sbjct: 61  GNSSFPVGPPLMLPVIGGRDVVVWGEKPEKR-ETDLSEAEMMKERFAKLLLGEDMSGGGK 119

Query: 121 GVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQE 180
           GVCTALAISNAITNLSA+VFGELW+LEPLA +KK MW REMEWLLCVSDSIVEL+PS+Q+
Sbjct: 120 GVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWCREMEWLLCVSDSIVELVPSIQQ 179

Query: 181 FPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGDDT 240
           FPGGGT+EVM TRPRSDLY+NLPALKKLD ML+++L+GF E EF YVDRG+IV    D+ 
Sbjct: 180 FPGGGTYEVMATRPRSDLYMNLPALKKLDAMLLSMLDGFCETEFWYVDRGIIVAEA-DNH 238

Query: 241 KTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSN 300
             +P  +SS RP    EEKWWLP P VPPNGLSE+ R+RLQQ R+CT+QILKAAMAINS+
Sbjct: 239 DAYPLSASSGRPSIRQEEKWWLPCPKVPPNGLSEDARKRLQQCRDCTNQILKAAMAINSS 298

Query: 301 VLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANRI 360
           VLAEMEIP AYLE+LPK+GK CLG+I+Y YITA+QFSPE LL  LDLSSE+ TLEIANRI
Sbjct: 299 VLAEMEIPTAYLETLPKNGKACLGDIIYRYITAEQFSPECLLDCLDLSSEHHTLEIANRI 358

Query: 361 EAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNLKLRFPS 420
           EAAVH+W+QK   K+    K+ RS+WGGKVKG V+D E+++ LA RA+T+L +L+LRFP 
Sbjct: 359 EAAVHVWKQKDWKKQPKHLKAKRSTWGGKVKGLVADTEKNQFLAIRAETLLHSLRLRFPG 418

Query: 421 LPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAAAETAS 480
           LPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDD+LYVDDA K+ AAAE+ +
Sbjct: 419 LPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDAVKRCAAAESMA 478

Query: 481 LYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSFYS 520
           L+ +      +P QKR+ PSPFS+Q S   SPF  P+F S
Sbjct: 479 LFGRGGLG-GLPIQKRMSPSPFSIQHSPFASPFATPTFCS 517

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459797|ref|XP_002285909.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis vinifera]

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/522 (67%), Positives = 406/522 (77%), Gaps = 7/522 (1%)

Query: 1   MASVSSEDGLEEMSERFESYSLSADVSESESSSSGSFSNRHFDS-ASTFLTSSSLVEPDF 59
           M + SSE+  +E SER ESYSLSADVSE ES S  S     +   A + L  S LV P+ 
Sbjct: 1   MGNGSSEEEFDERSERLESYSLSADVSECESLSGFSCDGDGYGGGAVSSLNYSPLVRPEV 60

Query: 60  DDSSGSSEEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGEDMSGGG 119
             +S      P+  PV GG HVV+      + P+ +LSE+EL+KERFAKLLLGEDMSGGG
Sbjct: 61  AVNSSFRAPPPLTSPVFGGGHVVI----PPRKPEKELSEVELIKERFAKLLLGEDMSGGG 116

Query: 120 KGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQ 179
           KG+ TALAISNAITNLSA+VFGELWKLEPLA  KK+MW REMEWLLCVSDSIVELIPS+Q
Sbjct: 117 KGISTALAISNAITNLSATVFGELWKLEPLAPEKKLMWHREMEWLLCVSDSIVELIPSVQ 176

Query: 180 EFPGG-GTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGD 238
           EFPGG GTFEVMVTRPRSDLY+NLPALKK+D ML+ +L+ F ++EF YVDRG+IV G  D
Sbjct: 177 EFPGGEGTFEVMVTRPRSDLYINLPALKKVDAMLLGMLDDFSDSEFYYVDRGVIVSGA-D 235

Query: 239 DTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAIN 298
           + +     S S R     EEKWWLPFP VPPNGLSE++  RLQQ +E T+QILKAAMAIN
Sbjct: 236 NCERHSLSSPSGRSSIRQEEKWWLPFPRVPPNGLSESVTNRLQQCKEWTNQILKAAMAIN 295

Query: 299 SNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIAN 358
           S+VLAEMEIP+ YL+SLPKSGK CLGE +Y  ITA QFSPE LL YLDLSSEYTTLEIAN
Sbjct: 296 SSVLAEMEIPDVYLDSLPKSGKACLGETIYRSITARQFSPECLLDYLDLSSEYTTLEIAN 355

Query: 359 RIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNLKLRF 418
           RIEAA+HIWRQKY  +   RTK+GRSSWGGKVK  V  +E++KLLA RA+TILQNL+LRF
Sbjct: 356 RIEAAIHIWRQKYLKRHTNRTKAGRSSWGGKVKVLVGYMEKNKLLAQRAETILQNLRLRF 415

Query: 419 PSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAAAET 478
           P LPQTALDM KIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLY+DDATK RA AE 
Sbjct: 416 PGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYIDDATKFRAVAEP 475

Query: 479 ASLYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSFYS 520
            SL+ Q  +    P +++ILPSPFS+Q +S  S    P+ YS
Sbjct: 476 ISLFKQDGYGDGCPLRRQILPSPFSIQNTSYVSQIAAPASYS 517

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103115|ref|XP_002312931.1| predicted protein [Populus trichocarpa] gi|222849339|gb|EEE86886.1| predicted protein [Populus trichocarpa]

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/519 (66%), Positives = 412/519 (79%), Gaps = 4/519 (0%)

Query: 1   MASVSSEDGLEEMSERFESYSLSADVSESESSSSG-SFSNRHFDSASTFLTSSSLVEPDF 59
           M SVSS+D     SER  SYSLSADVSESES +S  +FS R          SSS+     
Sbjct: 1   MGSVSSDDD-GGGSERCGSYSLSADVSESESCTSSSNFSCRRGLGRDGGCASSSMTSSPR 59

Query: 60  DDSSGSSEEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGEDMSGGG 119
             + G     P+M+PV+GG+ VVV  +  EK  ++DLSE+E+MKERFAKLLLGEDMSGGG
Sbjct: 60  PVAGGFCFPAPVMVPVIGGKDVVVWGSKNEKRRETDLSEVEMMKERFAKLLLGEDMSGGG 119

Query: 120 KGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQ 179
           KGVCTALAISNAITNLSA+VFGELW+LEPL  +KK MW+REMEWLLCVSDSIVEL+PS+Q
Sbjct: 120 KGVCTALAISNAITNLSATVFGELWRLEPLLPQKKSMWKREMEWLLCVSDSIVELVPSMQ 179

Query: 180 EFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGDD 239
           +FPGGGT+EVM TRPRSDLYVNLPALKKLD ML+++L+GF E EF YVDRG++V  GGD 
Sbjct: 180 QFPGGGTYEVMATRPRSDLYVNLPALKKLDAMLISMLDGFCETEFWYVDRGIVVADGGD- 238

Query: 240 TKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINS 299
              +PS  S  RP    EEKWWLP P VPPNGLS++ R+RLQQ R+CT+QILKAAMAINS
Sbjct: 239 CDAYPSGISGGRPSIRQEEKWWLPCPKVPPNGLSDDARKRLQQCRDCTNQILKAAMAINS 298

Query: 300 NVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANR 359
           +VL EMEIP AY+E+LPK+GK CLG+I+Y YITA+QFSP+ LL  LDLS+E+ TLEIANR
Sbjct: 299 SVLVEMEIPTAYMETLPKNGKACLGDIIYRYITAEQFSPDRLLDCLDLSTEHHTLEIANR 358

Query: 360 IEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNLKLRFP 419
           IEAAVH+W+QK   K     +   SSWGGKVKGFV+D  ++++LA RA+T+LQ+L+LRFP
Sbjct: 359 IEAAVHVWKQKDHKKHTHNMRIKHSSWGGKVKGFVTDSHKNQILAQRAETLLQSLRLRFP 418

Query: 420 SLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAAAETA 479
            LPQT LDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDD++YVDDA KQ AAAE+ 
Sbjct: 419 GLPQTTLDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVIYVDDAIKQCAAAESM 478

Query: 480 SLYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSF 518
           SL+++    G +P QKR+ PSPFS+Q+S   SPF  P++
Sbjct: 479 SLFNRGGLGG-LPIQKRMSPSPFSIQQSPFASPFATPTY 516

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575043|ref|XP_002528427.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis] gi|223532163|gb|EEF33969.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/555 (64%), Positives = 434/555 (78%), Gaps = 19/555 (3%)

Query: 1   MASVSSEDGLEEMSERFESYSLSADVSESESSSSGSF-SNRHFDS--ASTFLTSSSLVEP 57
           M SVSS+DG +E SER  SYSLSADVSESESS+S SF   R FD   AST +TSS  +  
Sbjct: 9   MGSVSSDDGGDEQSERCGSYSLSADVSESESSTSSSFWCRRGFDGEGASTSITSSPPLP- 67

Query: 58  DFDDSSGSSEEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGEDMSG 117
                  SS +     P++  + +++     EK  D+DLSE+E+MKERFAKLLLGEDMSG
Sbjct: 68  -------SSAKFCFQTPLLLPKDLLLWDIKPEKR-DTDLSEVEMMKERFAKLLLGEDMSG 119

Query: 118 GGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPS 177
           GGKGVCTALAISNAITNLSA+VFGELW+LEPLA +KK MW+REMEWLLCVSDSIVEL+PS
Sbjct: 120 GGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKSMWRREMEWLLCVSDSIVELVPS 179

Query: 178 LQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGG 237
           +Q+FPGGGT+E+M  +PRSDLYVNLPALKKLD ML+++L+GF E EF YVDRG+I+  G 
Sbjct: 180 VQQFPGGGTYEIMAAQPRSDLYVNLPALKKLDAMLISMLDGFCETEFWYVDRGIILADGA 239

Query: 238 DDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAI 297
           D+   +PS  S+ RP    EEKWWLP P +P NGLSE+ R+RLQQ R+CT+QILKAAMAI
Sbjct: 240 DN-DVYPSGFSTGRPSIRQEEKWWLPCPKLPSNGLSEDARKRLQQCRDCTNQILKAAMAI 298

Query: 298 NSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIA 357
           NS+VLAEMEIP AYLE+LPK GK CLG+I+Y YITA+QFSPE LL  LDLS+E+ TLEIA
Sbjct: 299 NSSVLAEMEIPTAYLETLPKCGKACLGDIIYRYITAEQFSPECLLDCLDLSTEHHTLEIA 358

Query: 358 NRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIER-SKLLAHRADTILQNLKL 416
           NRIEAA+H+W+QK Q K    TK+  +SWGGKVKG V+D +R +  LA RA+T+LQ+L+L
Sbjct: 359 NRIEAALHVWKQKDQRKHTSHTKARHTSWGGKVKGLVADTKRKNTFLAQRAETLLQSLRL 418

Query: 417 RFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAAA 476
           RFP LPQTALDM+KIQYNKDVGQSILESYSRVMESLAFNIMARIDD++YVDDAT + AAA
Sbjct: 419 RFPGLPQTALDMHKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVIYVDDATNRCAAA 478

Query: 477 ETASLYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSFYS---LVRSPRGRAHSLL 533
           E+ SL++++   G  P QKR+ PSPFS+Q+S  TSPF  P+F S   +  SP GRA S +
Sbjct: 479 ESMSLFNRSGLGGH-PIQKRMSPSPFSIQQSPFTSPFATPTFCSSTPVAGSP-GRAPSSI 536

Query: 534 DQSDLRARIDGALEK 548
             ++++   D   EK
Sbjct: 537 KMNNIKEATDQKFEK 551

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544030|ref|XP_003540459.1| PREDICTED: rop guanine nucleotide exchange factor 1-like isoform 1 [Glycine max]

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/522 (66%), Positives = 411/522 (78%), Gaps = 23/522 (4%)

Query: 1   MASVSSEDGLEEMSERFESYSLSADVSESESSSSGSFSNRHFDSASTFLTSSSLVEPDFD 60
           M SVSSEDG    S+R  SYSLSADVSESES SS  FS R FD+     +SS+ + P   
Sbjct: 1   MGSVSSEDG----SDRCGSYSLSADVSESESCSS--FSARRFDAEGA--SSSANLSPRPV 52

Query: 61  DSSGSSEEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGEDMSGGGK 120
            +  +     +MLPV+GG+ VVV   D ++  D DLSE+E+MKERFAKLLLGEDMSGGGK
Sbjct: 53  AAHFNFPPAQVMLPVIGGKDVVVW--DHKR--DLDLSEVEMMKERFAKLLLGEDMSGGGK 108

Query: 121 GVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQE 180
           GVCTALAISNAITNLSA+VFGELW+LEPLA +KK MW+REMEWLLCVSDSIVEL+PS+Q+
Sbjct: 109 GVCTALAISNAITNLSATVFGELWRLEPLAPQKKTMWRREMEWLLCVSDSIVELVPSVQQ 168

Query: 181 FPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGDDT 240
           FPGGGT+EVM TRPRSDLY+NLPALKKLD ML+N+L+GF + +F YVDRG+I+G   D  
Sbjct: 169 FPGGGTYEVMATRPRSDLYINLPALKKLDGMLLNMLDGFHDTQFWYVDRGIILGDSKD-- 226

Query: 241 KTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSN 300
                C +  RP    EEKWWLP P +PPNGLSE  R+RLQQ R+CT+QILKAA+AIN++
Sbjct: 227 -----CDAYGRPSVRQEEKWWLPSPKLPPNGLSEESRKRLQQCRDCTNQILKAAVAINTS 281

Query: 301 VLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANRI 360
           VLAEMEIP AY+ESLPK+GK CLG+I+Y YITADQFSPE LL  LDLS+E+ TL+IANRI
Sbjct: 282 VLAEMEIPGAYIESLPKNGKACLGDIIYRYITADQFSPECLLDCLDLSTEHHTLDIANRI 341

Query: 361 EAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSK--LLAHRADTILQNLKLRF 418
           EAA+H+WR K   K +   KS R SWGGKVKG V+D E++K   LA RA+T+L++LK RF
Sbjct: 342 EAAIHVWRLKDHKKHLSSAKS-RRSWGGKVKGLVADGEKNKNNFLAQRAETLLESLKHRF 400

Query: 419 PSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAAAET 478
           P LPQTALDM KIQYNKDVGQSILESYSRVMESLAFNIMARIDD+LYVDD+ K+ AAA++
Sbjct: 401 PGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDSIKRCAAADS 460

Query: 479 ASLYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSFYS 520
            SL+ +  F G +P QKR  PSPFS+Q +   SPF  P+F S
Sbjct: 461 LSLFSRGGFGG-MPIQKRFSPSPFSIQHTPYASPFATPTFCS 501

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356538528|ref|XP_003537755.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Glycine max]

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/522 (65%), Positives = 409/522 (78%), Gaps = 19/522 (3%)

Query: 1   MASVSSEDGLEEMSERFESYSLSADVSESESSSSGSFSNRHFDSASTFLTSSSLVEPDFD 60
           M SVSSED  + MS R  SYSLSADVSESES SS  FS R FD+     +SS+ + P   
Sbjct: 1   MGSVSSEDASDHMSNRCGSYSLSADVSESESCSS--FSARRFDAEGA--SSSANLSPRPV 56

Query: 61  DSSGSSEEVPIMLPVVGGRHVVVSVNDTEKIPDSDLSEIELMKERFAKLLLGEDMSGGGK 120
            +  +     ++LPV+GG+ V V   D ++  D DLSE+E+MKERFAKLLLGEDMSGGGK
Sbjct: 57  AAHFNFPPAQVLLPVIGGKDVFVW--DHKR--DLDLSEVEMMKERFAKLLLGEDMSGGGK 112

Query: 121 GVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQE 180
           GVCTALAISNAITNLSA+VFGELW+LEPLA +KK MW+REMEWLLCVSDSIVEL+PS+Q+
Sbjct: 113 GVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMEWLLCVSDSIVELVPSVQQ 172

Query: 181 FPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGDDT 240
           FPGGGT+EVM TRPRSDLY+NLPALKKLD ML+++L+GF + +F YVDRG+I+G   D  
Sbjct: 173 FPGGGTYEVMATRPRSDLYINLPALKKLDGMLLSMLDGFHDTQFWYVDRGIILGDSKD-- 230

Query: 241 KTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSN 300
                C +  RP    EEKWWLP P +PPNGLSE  R+RLQQ R+CT+QILKAA+AIN++
Sbjct: 231 -----CDAYGRPSVRQEEKWWLPSPKLPPNGLSEESRKRLQQCRDCTNQILKAAVAINTS 285

Query: 301 VLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANRI 360
           VLAEMEIP AY+ESLPK+GK CLG+I+Y Y+TADQFSPE LL  LDLSSE+ TL+IANRI
Sbjct: 286 VLAEMEIPGAYIESLPKNGKACLGDIIYRYLTADQFSPECLLDCLDLSSEHHTLDIANRI 345

Query: 361 EAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSK--LLAHRADTILQNLKLRF 418
           EAA+H+WR K   K +   KS R  WGGKVKG V+D E++K   LA RA+T+L++LK RF
Sbjct: 346 EAAIHVWRLKDHKKHLSSAKS-RRPWGGKVKGLVADSEKNKNNFLAQRAETLLESLKHRF 404

Query: 419 PSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRAAAET 478
           P LPQTALDM KIQYNKDVGQSILESYSRVMESLAFNIMARIDD+LYVDD+ K+ AAA++
Sbjct: 405 PGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDSIKRCAAADS 464

Query: 479 ASLYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSFYS 520
            SL+ +  F G +P QKR  PSPFS+Q +   SPF  P+F S
Sbjct: 465 LSLFSRGGFGG-MPIQKRFSPSPFSIQHTPYASPFATPTFCS 505

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	551
TAIR|locus:2121828	548	ROPGEF1 "ROP (rho of plants) g	0.949	0.954	0.581	4.7e-151
TAIR|locus:2185153	546	ROPGEF7 "ROP (rho of plants) g	0.842	0.849	0.527	2.1e-123
TAIR|locus:2153684	611	ROPGEF5 "ROP (rho of plants) g	0.803	0.725	0.513	2.6e-118
TAIR|locus:2078976	579	ROPGEF6 "ROP (rho of plants) g	0.749	0.713	0.502	3e-108
TAIR|locus:2126071	473	ROPGEF3 "ROP (rho of plants) g	0.649	0.756	0.52	4.2e-95
TAIR|locus:2198220	485	ROPGEF2 "ROP (rho of plants) g	0.740	0.841	0.481	4.8e-94
TAIR|locus:2119320	517	ROPGEF9 "ROP (rho of plants) g	0.656	0.700	0.503	7.8e-94
TAIR|locus:2050699	463	ROPGEF4 "ROP (rho of plants) g	0.666	0.792	0.482	7.5e-89
TAIR|locus:2028701	576	ROPGEF14 "ROP (rho of plants)	0.660	0.631	0.401	7.3e-75
TAIR|locus:2018169	607	ROPGEF11 "ROP (rho of plants)	0.470	0.426	0.523	8e-69

TAIR|locus:2121828 ROPGEF1 "ROP (rho of plants) guanine nucleotide exchange factor 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1474 (523.9 bits), Expect = 4.7e-151, P = 4.7e-151
 Identities = 321/552 (58%), Positives = 385/552 (69%)

Query:     1 MASVSSEDGLEEMSERFXXXXXXXXXXXXXXXXXXXXXNRHFDSASTFLTSSSLVEPDFD 60
             M S+SSE+  E  SER                          + AS+ + SS    P   
Sbjct:     1 MGSLSSEEDDEVSSERCGSYSPSADISESESSSSFSCHRFDGEGASSSIPSS----PRVV 56

Query:    61 DSSGSSEEVPIMLPXXXXXXXXXXXNDTEKIPDSDLSEIELMKERFAKLLLGEDMSGGGK 120
                G     P+MLP              +K PD+DLSEIE+MKERFAKLLLGEDMSGGGK
Sbjct:    57 AGRGFYFPAPVMLPVIGGKDVVWD----DKQPDNDLSEIEMMKERFAKLLLGEDMSGGGK 112

Query:   121 GVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQE 180
             GVCTALAISNAITNLSA+VFGELW+LEPLA +KK MW+RE+EWLLCVSDSIVELIPS+Q+
Sbjct:   113 GVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRRELEWLLCVSDSIVELIPSIQQ 172

Query:   181 FPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGDDT 240
             FPGGGT+E+M TRPRSDLY NLPALKKLD ML+++L+ F + EF Y DRG+++G    D+
Sbjct:   173 FPGGGTYEIMETRPRSDLYANLPALKKLDAMLIDMLDAFSDTEFWYTDRGIVLGDCDKDS 232

Query:   241 KTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSN 300
                P+   S R     E+KWWLP P VPPNGLSE  R++LQQ R+  +QILKAA+AINS 
Sbjct:   233 YNSPA---SVRQ----EDKWWLPCPKVPPNGLSEEARKKLQQCRDFANQILKAALAINSG 285

Query:   301 VLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSSEYTTLEIANRI 360
             VLAEMEIP+ YLE+LPKSGKECLGEI+Y Y+TA++FSPE LL  LDLSSE+ TLEIANRI
Sbjct:   286 VLAEMEIPDPYLETLPKSGKECLGEIIYQYLTANKFSPECLLDCLDLSSEHQTLEIANRI 345

Query:   361 EAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNLKLRFPS 420
             EAAVH+WRQK   +   + K   SSWGGKVKG V+D ER+  L  RA+T+LQ+L++RFP 
Sbjct:   346 EAAVHVWRQKNGRRHKKQAKLKLSSWGGKVKGLVNDNERNDFLVQRAETLLQSLRIRFPG 405

Query:   421 LPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQR-AAAETA 479
             LPQT LDMNKIQYNKDVGQSILESYSRVMES+AFNI ARIDD+LYVDDA ++  +  E+ 
Sbjct:   406 LPQTTLDMNKIQYNKDVGQSILESYSRVMESMAFNITARIDDVLYVDDAMRRSISVTESL 465

Query:   480 SLYDQTRFNGTIPKQKRILPSPFSLQRSSSTSPFRIPSFYSLVRSPRGRAHSL--LDQSD 537
             SL+     NG  P QK      FS+Q S   SPF  P+     RSPR RA  L  + ++ 
Sbjct:   466 SLFS---INGLNP-QKA-----FSVQSSPHGSPFATPALSVASRSPR-RAPPLYSVKRNG 515

Query:   538 LRAR-IDGALEK 548
              R + I G  EK
Sbjct:   516 TREKGIVGETEK 527

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=ISM

GO:0009860 "pollen tube growth" evidence=IMP

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008356 "asymmetric cell division" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0080092 "regulation of pollen tube growth" evidence=IGI

TAIR|locus:2185153 ROPGEF7 "ROP (rho of plants) guanine nucleotide exchange factor 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1213 (432.1 bits), Expect = 2.1e-123, P = 2.1e-123
 Identities = 256/485 (52%), Positives = 330/485 (68%)

Query:    51 SSSLVEPDFDDSSGSSEEVPIMLPXXXXXXXXXXXNDTEKI-PDSDLSEIELMKERFAKL 109
             SS     + ++ S S  E     P            + +KI  DS +SE+E+MKERF+KL
Sbjct:    22 SSETTRQEEEEQSPSCTEDFTASPVSSRWSVKNIDGEKKKIRSDSRVSEVEMMKERFSKL 81

Query:   110 LLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSD 169
             LLGEDMSG G GVCTALAISNAITNL A++FG+LW+LEPL   KK MW+REMEWLLCVSD
Sbjct:    82 LLGEDMSGSGNGVCTALAISNAITNLCATLFGQLWRLEPLPTEKKEMWRREMEWLLCVSD 141

Query:   170 SIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDR 229
              IVE+ P+ Q FP G   E+M  RPRSDLYVNLPAL+KLD ML+ IL+ F E EF YVD+
Sbjct:   142 HIVEMTPTWQTFPDGTKLEIMTCRPRSDLYVNLPALRKLDNMLLEILDSFEETEFWYVDQ 201

Query:   230 GLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQ 289
             G++      D       SS  + F   E+KWWLP P V P GL EN R++LQ  R+CT+Q
Sbjct:   202 GIMAHESAAD-----GSSSFRKSFQRQEDKWWLPVPRVSPGGLQENSRKQLQHKRDCTNQ 256

Query:   290 ILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFSPESLLAYLDLSS 349
             ILKAAMAINS  LA+MEIP +YLESLP+ G+ CLG+++Y YI++DQFSPE LL  LDLSS
Sbjct:   257 ILKAAMAINSITLADMEIPESYLESLPRKGRSCLGDLIYRYISSDQFSPECLLDCLDLSS 316

Query:   350 EYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADT 409
             E+  +EIANR+E+++++W ++  +K    TK+   SW   VK  + D ++ +L+A RA++
Sbjct:   317 EHQAIEIANRVESSIYLWHKRTNSKPATNTKT---SWE-MVKELMVDADKLELMADRAES 372

Query:   410 ILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDA 469
             +L +LK RFP LPQTALDM+KIQYNKD+G+SILESYSRV+ESLAFNI+ARIDDLL+VDD 
Sbjct:   373 LLLSLKQRFPGLPQTALDMSKIQYNKDIGKSILESYSRVLESLAFNIVARIDDLLFVDDL 432

Query:   470 TKQRAAAETASLYDQTRF---NGTIPKQKRILPS--PFSLQ-RSSSTSP-----FRIPSF 518
             T+  +     +L +       +  +P      PS  P   + RSS T P     F+IP  
Sbjct:   433 TRHSSDQIPTTLGNNGNDAPKSIAVPVSNYTTPSYSPSKQELRSSITVPPSPSRFKIPHS 492

Query:   519 YSLVR 523
              S+ R
Sbjct:   493 SSVKR 497

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2153684 ROPGEF5 "ROP (rho of plants) guanine nucleotide exchange factor 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
 Identities = 240/467 (51%), Positives = 324/467 (69%)

Query:    90 KIPDSDLSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPL 149
             K  + + +++E+MKERFAKLLLGEDMSG GKGVCTALAISNAITNL A++FG+LW+LEPL
Sbjct:    94 KAKEMNSADVEMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATIFGQLWRLEPL 153

Query:   150 ALRKKMMWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLD 209
             +  KK MW+REMEW+L VSD IVEL PS Q +P G  FEVM  RPR DL++NLPAL+KLD
Sbjct:   154 SSEKKEMWRREMEWILSVSDHIVELTPSTQTYPDGNKFEVMTCRPRFDLFINLPALRKLD 213

Query:   210 TMLVNILEGFREAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPP 269
              ML++IL  F++ EF YVD+G IV    D + +F       R     EEKWWLP P + P
Sbjct:   214 NMLLDILASFKKTEFWYVDQG-IVASENDGSASF------RRKIQRQEEKWWLPVPRLAP 266

Query:   270 NGLSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYN 329
             NGL+E  R  L   REC +QILKAAMAINS  L EM++P +YLE+LPK+G+ CLG+++Y 
Sbjct:   267 NGLTEEARTELNHKRECATQILKAAMAINSLALTEMDVPKSYLETLPKNGRSCLGDVIYR 326

Query:   330 YITADQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSS---- 385
             Y+T+D+FS ESLL  LDLSSE+  L+IANR+EA++++WR++ Q K  +   +  ++    
Sbjct:   327 YVTSDKFSAESLLDCLDLSSEHIALDIANRVEASIYVWRRRVQTKLGVNNNTSSTTPKLT 386

Query:   386 WGGKVKGFVSDIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESY 445
             W   VK  ++  ++  LL  R++T+L+ LK RFPSL QT+LD++KIQ+NKD+G+SILESY
Sbjct:   387 WE-MVKELMAAGDKRGLLVERSETLLRCLKQRFPSLTQTSLDISKIQWNKDIGKSILESY 445

Query:   446 SRVMESLAFNIMARIDDLLYVDDATKQRAAAETASLYDQTRFNGTIPKQKRILPSPFSLQ 505
             SR +ESLA NI+ARIDDLLYVDD TKQ   ++  +L      +  I   K+++P P+ + 
Sbjct:   446 SRALESLASNIIARIDDLLYVDDLTKQ---SDDNNLLSSPAVSSIIA-HKKVVPLPYLI- 500

Query:   506 RSSSTSPFRI-----PSFYSLVRSPR-GRAHSLLDQSDLRARIDGAL 546
              S+S +P+R      P F   + SP+ G   +     D    I+  L
Sbjct:   501 -SASGTPYRTSFSTTPGFSPSMISPKKGERRTPYSSKDTNKIIEKGL 546

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2078976 ROPGEF6 "ROP (rho of plants) guanine nucleotide exchange factor 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
 Identities = 220/438 (50%), Positives = 304/438 (69%)

Query:    94 SDLSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRK 153
             ++ SEIEL+KER AKLLLGEDMSG G+GVC ALAISNAITNL A++ G+ W+LEP+   K
Sbjct:   103 TETSEIELLKERMAKLLLGEDMSGSGEGVCPALAISNAITNLYAAILGQQWRLEPIPSEK 162

Query:   154 KMMWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLV 213
             K+MW+RE+E LL VSD IVEL+PS Q FP G   EVM  RPRSDL+  LPAL+KLD ML+
Sbjct:   163 KLMWRREIEVLLSVSDHIVELVPSFQNFPNGNKIEVMNCRPRSDLFTCLPALRKLDNMLI 222

Query:   214 NILEGFREAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLS 273
              IL+ F E EF YVD+G++              S+ S  F    +KWWLP P VP +GL+
Sbjct:   223 EILDSFGETEFWYVDQGIVAAE-----------SARSNSFREDGDKWWLPLPRVPSDGLT 271

Query:   274 ENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITA 333
             E  R++L   RE T+QILKA M+INS  LAEME+P +YLE+LPK+G+ CLG+ +Y  IT+
Sbjct:   272 EQTRKKLDHTREFTNQILKACMSINSIALAEMEVPQSYLEALPKNGRSCLGDFLYRNITS 331

Query:   334 DQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRT-KSGRSSWGGKVKG 392
             D FS + LL  +DLSSE   +E+ANR+EA++++WR++  ++ +I   +S  + WG  VK 
Sbjct:   332 DNFSADHLLESIDLSSELAVVEMANRVEASMYVWRRRAHSRHLISLYRSTSTRWGMIVKE 391

Query:   393 FV---SDIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVM 449
              +   +D ++ ++ A RA+++L  LK RFP L QTALD +KIQYNKDVG+SILESYSRV+
Sbjct:   392 MMMHQTDGDKREIFAERAESLLIRLKQRFPGLRQTALDTSKIQYNKDVGKSILESYSRVL 451

Query:   450 ESLAFNIMARIDDLLYVDDATKQRAAAETASLYDQTRF---------NGTIPKQKRILPS 500
             ESLA++I  RI+++L++DD +K     +  S  D+ R          +G++ ++K   PS
Sbjct:   452 ESLAYSIGVRIEEVLFMDDISKDDGDGDDDSCSDKLRLLSKEAASGGSGSL-REKLSAPS 510

Query:   501 PFSLQRSSSTSPFRIPSF 518
              FS+  S +++P+R  SF
Sbjct:   511 LFSVSFSGTSTPYRTLSF 528

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2126071 ROPGEF3 "ROP (rho of plants) guanine nucleotide exchange factor 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 946 (338.1 bits), Expect = 4.2e-95, P = 4.2e-95
 Identities = 195/375 (52%), Positives = 265/375 (70%)

Query:    98 EIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMW 157
             E+E MKERFAKLLLGEDMSG GKGVCTA+ ISNAITNL A+VFG+  +LEPL   K+ +W
Sbjct:   104 ELETMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLETEKRALW 163

Query:   158 QREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILE 217
             +REM  LL V D IVE IP  Q    G T EVM +RPR+D+Y+NLPAL+KLD+ML+  L+
Sbjct:   164 KREMNCLLSVCDYIVEFIPRCQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALD 223

Query:   218 GFREAEFCYVDRG-LIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENM 276
              F+  EF Y + G L +      T +F       +     EEKWWLP P+VP  GLS+  
Sbjct:   224 SFQNTEFWYAEEGSLSMKSARSSTGSFRKVIVQRK-----EEKWWLPVPLVPSEGLSDKA 278

Query:   277 RERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITAD-Q 335
             R++L+  RE T+QI KAAMAINS++L+EMEIP++Y+ +LPK GK  +G+ +Y Y++   +
Sbjct:   279 RKQLKNKRESTNQIHKAAMAINSSILSEMEIPDSYMTTLPKCGKSSVGDSIYRYMSGSGR 338

Query:   336 FSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVS 395
             F PE LL  L++SSE+  +++A+R+EA+++ WR+K          + ++SW   VK  +S
Sbjct:   339 FFPEQLLDCLNISSEHEAVQLADRVEASMYTWRRKSC------LSNSKNSWN-MVKDLMS 391

Query:   396 DIERSK---LLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESL 452
               ER+    ++A RA+T+L  LK R+P L QT+LD+ KIQYNKDVG+++LESYSRV+E L
Sbjct:   392 TTERTDKNYVMAERAETLLFCLKQRYPELSQTSLDICKIQYNKDVGKAVLESYSRVLEGL 451

Query:   453 AFNIMARIDDLLYVD 467
             AFNI+A IDD+LYVD
Sbjct:   452 AFNIVAWIDDVLYVD 466

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2198220 ROPGEF2 "ROP (rho of plants) guanine nucleotide exchange factor 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
 Identities = 209/434 (48%), Positives = 284/434 (65%)

Query:    43 DSASTFLTSSSLVE-PDFDDSSGSSEEVPIMLPXXXXXXXXXXXNDTEKIPDSDLSEIEL 101
             D  S+F T +S  + P   +S+ S+       P            D E +   ++SE EL
Sbjct:    62 DETSSFCTEASPSDWPVLTESNNSASS---NFPTVFDLKHNQIETD-EHLAVQEISEPEL 117

Query:   102 --MKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQR 159
               MKERF+KLLLGEDMSG GKGVCTA+ ISNAITNL A+VFG+  +LEPL + +K  W+R
Sbjct:   118 ETMKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLEIEQKTTWKR 177

Query:   160 EMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGF 219
             EM  LL V D I E IP  Q    G T EVM +RPR+D+Y+NLPAL+KLD+ML+  L+ F
Sbjct:   178 EMNCLLSVCDYIFEFIPKSQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALDSF 237

Query:   220 REAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFA--GPEEKWWLPFPMVPPNGLSENMR 277
             ++ EF Y + G +        K+  S + S R       EEKWWLP P+VP  GLSE  R
Sbjct:   238 QKTEFWYAEEGSL------SMKSTRSATGSFRKVIVQRKEEKWWLPIPLVPLQGLSEKAR 291

Query:   278 ERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITAD-QF 336
             ++L+  RE T+QI KAAMAINS++L EM+IP++Y+ +LPKSGK   G+ +Y ++T+  +F
Sbjct:   292 KQLKSKRESTNQIHKAAMAINSSILGEMDIPDSYMATLPKSGKASTGDAIYRHMTSSGRF 351

Query:   337 SPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSD 396
             SPE LL  L + SE+  L++A+R+EA+++ WR+K          + +SSW   VK  +S 
Sbjct:   352 SPEKLLDRLKIVSEHEALQLADRVEASMYTWRRK------ACLNNSKSSWN-MVKDLMSI 404

Query:   397 IERSK---LLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLA 453
              ERS    +LA RA+++L  LK R+P L QT+LD+ KI  NKDVG+++LESYSRV+E LA
Sbjct:   405 TERSDKNYVLAERAESLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLESYSRVLEGLA 464

Query:   454 FNIMARIDDLLYVD 467
             FNI+A IDD+LYVD
Sbjct:   465 FNIVAWIDDVLYVD 478

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2119320 ROPGEF9 "ROP (rho of plants) guanine nucleotide exchange factor 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
 Identities = 196/389 (50%), Positives = 265/389 (68%)

Query:    93 DSDLSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALR 152
             D   SE E+MK+RF KLLLGEDMSGGGKGV +ALA+SNAITNL+AS+FGE  KL+P+A  
Sbjct:    69 DKQQSETEMMKDRFTKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMAPD 128

Query:   153 KKMMWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTML 212
             ++  W++E++WLL V+D IVE +PS Q    G   E+MVTR R DL +N+PAL+KLD ML
Sbjct:   129 RRARWKKEIDWLLSVTDHIVEFVPSQQISKEGVCTEIMVTRQRGDLLMNIPALRKLDAML 188

Query:   213 VNILEGFR-EAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNG 271
             ++ L+ FR   EF YV R    G    + +T              ++KWWLP   VPPNG
Sbjct:   189 IDTLDNFRGHNEFWYVSRDSEEGKQARNERT--------------KDKWWLPPVKVPPNG 234

Query:   272 LSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYI 331
             LSE+ R  L   ++  SQ+ KAAMAIN+ VL+EM IP++Y+ESLPK+G+  LG+ +Y  I
Sbjct:   235 LSESARRMLHFQKDSVSQVQKAAMAINAQVLSEMAIPDSYIESLPKNGRVSLGDSLYKSI 294

Query:   332 TADQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVK 391
             T + F PE  L+ LDLS+E+  L++ NRIEA++ IW++K      +  K  +SSWG  V 
Sbjct:   295 TEEWFDPEQFLSTLDLSTEHKVLDVKNRIEASIVIWKRK------LHLKDNKSSWGSAVS 348

Query:   392 GFVSDIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMES 451
                  +E+ +L   RA+TIL  LK +FP LPQ++LD++KIQYNKDVG ++LESYSR++ES
Sbjct:   349 -----LEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQYNKDVGHAVLESYSRILES 403

Query:   452 LAFNIMARIDDLLYVDD-ATKQRAAAETA 479
             L +  M+RIDD+LY D  A KQ    ET+
Sbjct:   404 LGYTEMSRIDDVLYADSLARKQCTGEETS 432

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0010048 "vernalization response" evidence=RCA

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

GO:0080092 "regulation of pollen tube growth" evidence=IGI

TAIR|locus:2050699 ROPGEF4 "ROP (rho of plants) guanine nucleotide exchange factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
 Identities = 189/392 (48%), Positives = 270/392 (68%)

Query:    91 IPDSDLSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLA 150
             I  ++ +E+E+M+ERFAKLLLGEDMSG GKGVCTA+ +SN+ITNL A+VFG+  +L+PL+
Sbjct:    86 IDSAEDAELEMMRERFAKLLLGEDMSGSGKGVCTAVTVSNSITNLYATVFGQSLRLQPLS 145

Query:   151 LRKKMMWQREMEWLLCVSDSIVELIP-SLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLD 209
               KK +W+REM   + + D IVE+IP SL     G   E+  T+ RSD+ ++LPAL+KLD
Sbjct:   146 TEKKDLWKREMNCFMSICDYIVEVIPRSL-----GTNVEITETKLRSDILMSLPALRKLD 200

Query:   210 TMLVNILEGFREAEFCYVDRG---LIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPM 266
              ML+ IL+ F E EF YV+RG   +  GGGG D+ TF       +     +EKWWLP P 
Sbjct:   201 NMLMEILDSFTENEFWYVERGSSSMNSGGGGRDSGTFRKVVVQRK-----DEKWWLPVPC 255

Query:   267 VPPNGLSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEI 326
             VP  GLSE  R+ L+  R+C SQI KAA+AIN + L +M+IP++YL +LPKSGK  +G++
Sbjct:   256 VPAEGLSEEERKHLRHKRDCASQIHKAALAINDSTLNDMDIPDSYLTTLPKSGKASVGDV 315

Query:   327 MYNYI-TADQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSS 385
             +Y  + TA++F P+ LL  L ++SE+  LE+A+++EA++  WR+K        T S +SS
Sbjct:   316 IYKQLCTAEKFYPDQLLDILKITSEHEALELADKVEASLVTWRRKTGGL----THS-KSS 370

Query:   386 WGGKVKGFVSDIERSK----LLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSI 441
             W   +K    D +R      +LA RA ++L  LK R+P L QT+LD+ KIQ+N+DVG+++
Sbjct:   371 WD-MMKDISGDADRGNDKNHILAARARSLLFCLKQRYPELSQTSLDICKIQFNRDVGKAV 429

Query:   442 LESYSRVMESLAFNIMARIDDLLYVDDATKQR 473
             LESYSRV+E LA+N+++ IDD+LYVD   + R
Sbjct:   430 LESYSRVLEGLAYNVVSWIDDVLYVDRTVRNR 461

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0048767 "root hair elongation" evidence=IMP

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

GO:0009531 "secondary cell wall" evidence=IDA

GO:0009664 "plant-type cell wall organization" evidence=IMP

TAIR|locus:2028701 ROPGEF14 "ROP (rho of plants) guanine nucleotide exchange factor 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
 Identities = 152/379 (40%), Positives = 235/379 (62%)

Query:    98 EIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMW 157
             ++E MKE+F+KLLLGED++GG KGV  ALA+SNA+T+L+ S+FGELWKLEPL   KK  W
Sbjct:   136 DVEAMKEKFSKLLLGEDVTGGCKGVQVALALSNAVTHLATSIFGELWKLEPLCEEKKQKW 195

Query:   158 QREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILE 217
             +REM+WLL  ++ ++EL+PS Q    G + E+M  + R+D+++NLPAL+KLD+ML+  L+
Sbjct:   196 RREMDWLLSPTNYMIELVPSKQNDANGRSLEIMTPKARADIHMNLPALQKLDSMLIETLD 255

Query:   218 GFREAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMR 277
                  EF Y + G    G    T      S S R        WWLP P VP  GLS + R
Sbjct:   256 SMVNTEFWYSEIGSRAEGKNKST------SESKR--------WWLPSPQVPKPGLSNSGR 301

Query:   278 ERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFS 337
             ++L    +   Q+ KA  AIN N+L EM +P    E++PKSGK  LG+ +Y  +  +  +
Sbjct:   302 KKLLDKGKVVYQVFKATKAINENILLEMPVPIVIKEAIPKSGKNSLGDELYKMLAVESAT 361

Query:   338 PESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDI 397
              + +   L+L +E+  LE  N++E+A+  W+++   +        R+SW    K  +S+I
Sbjct:   362 VDEIFISLNLGTEHAALETVNKLESAMFAWKERITEQGSNGKSPVRASWSF-AKDPLSEI 420

Query:   398 ERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIM 457
              R++ L +RA+ +   +K + P+LP + LD  KIQY+KD+G ++LE+YSR + +LAF I+
Sbjct:   421 GRNESLLNRAEALRTQIKSKHPNLPHSFLDATKIQYDKDIGHAVLEAYSRTLANLAFRIL 480

Query:   458 ARIDDLLYVDDATKQRAAA 476
             +R+ ++L  D  +   + A
Sbjct:   481 SRMGEILKEDSLSNPNSPA 499

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0080092 "regulation of pollen tube growth" evidence=IGI

TAIR|locus:2018169 ROPGEF11 "ROP (rho of plants) guanine nucleotide exchange factor 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 145/277 (52%), Positives = 194/277 (70%)

Query:    99 IELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQ 158
             +E MKE+F+KLLLGEDMSGGGKGV +ALA+SNAITNL+AS FGE  +LEP+A+ +K  W+
Sbjct:   169 MEQMKEKFSKLLLGEDMSGGGKGVSSALALSNAITNLAASAFGEQRRLEPMAVDRKTRWR 228

Query:   159 REMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEG 218
             RE+ WL+ V+D IVE  P+ Q    G + EVM TR R+DL  N+PALKKLD ML++ L+ 
Sbjct:   229 REIGWLISVADYIVEFAPTQQTNKDGTSMEVMSTRQRTDLLCNIPALKKLDAMLLDCLDK 288

Query:   219 FREA-EFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSENMR 277
             F++  EF YV +         D+    SC + +      +EKWWLP   VPPNGLSE  R
Sbjct:   289 FKDQDEFYYVKK---------DSPD--SCETRN------DEKWWLPAVKVPPNGLSEISR 331

Query:   278 ERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQFS 337
               LQ  +EC +Q+LKAAMAIN+ VL+EMEIP +YLESLPK+G+  LG+++Y  IT + F 
Sbjct:   332 RFLQSQKECVNQVLKAAMAINAQVLSEMEIPESYLESLPKNGRASLGDVIYRMITVEMFD 391

Query:   338 PESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNK 374
              +  L  +DLSSE+  L++ NRIEA++ IW++K   K
Sbjct:   392 ADQFLIEMDLSSEHKILDLKNRIEASIVIWKRKMVQK 428

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007017 "microtubule-based process" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0048364 "root development" evidence=IMP

GO:0080147 "root hair cell development" evidence=IMP

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93ZY2	ROGF1_ARATH	No assigned EC number	0.6242	0.9110	0.9160	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.V.1980.1 hypothetical protein (474 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	551
pfam03759	360	pfam03759, PRONE, PRONE (Plant-specific Rop nucleo	0.0

>gnl|CDD|217715 pfam03759, PRONE, PRONE (Plant-specific Rop nucleotide exchanger)

 Score =  616 bits (1591), Expect = 0.0
 Identities = 243/380 (63%), Positives = 293/380 (77%), Gaps = 20/380 (5%)

Query: 95  DLSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKK 154
             SE+ELMKERFAKLLLGEDMSGGGKGV TALA+SNAITNL+A+VFGELW+LEPLA  KK
Sbjct: 1   LPSEMELMKERFAKLLLGEDMSGGGKGVSTALALSNAITNLAATVFGELWRLEPLAPEKK 60

Query: 155 MMWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVN 214
            MW+REM+WLL V+D IVE +PS Q  P G T EVM TRPRSDLY+NLPAL+KLD ML+ 
Sbjct: 61  AMWRREMDWLLSVTDYIVEFVPSKQTLPDGTTMEVMTTRPRSDLYMNLPALRKLDAMLLE 120

Query: 215 ILEGFREAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSE 274
           IL+ F++ EF YVD+G              S SS  R     EEKWWLP P VPP GLSE
Sbjct: 121 ILDSFKDTEFWYVDQG--------------SLSSFRRKSQRQEEKWWLPVPKVPPGGLSE 166

Query: 275 NMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITAD 334
           + R++LQ  R+C +QILKAAMAINS VLAEMEIP +Y+ESLPK+G+  LG+ +Y YIT+D
Sbjct: 167 SSRKKLQHKRDCVNQILKAAMAINSQVLAEMEIPESYIESLPKNGRASLGDAIYRYITSD 226

Query: 335 QFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFV 394
           QFSP+ LL  LDLSSE+  LE+ANRIEA+++IWR+K        TK  +SSWG  VK  +
Sbjct: 227 QFSPDQLLDCLDLSSEHKALELANRIEASMYIWRRKAH------TKDSKSSWGSAVKDLM 280

Query: 395 SDIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAF 454
           +D E+ +LLA RA+T+L  LK RFP LPQT+LD++KIQYNKDVGQ+ILESYSRV+ESLAF
Sbjct: 281 ADGEKRELLAERAETLLLCLKQRFPGLPQTSLDISKIQYNKDVGQAILESYSRVLESLAF 340

Query: 455 NIMARIDDLLYVDDATKQRA 474
           NIM+RIDD+LY DD  K+  
Sbjct: 341 NIMSRIDDVLYADDLAKKSE 360

This is a functional guanine exchange factor (GEF) of plant Rho GTPase. Length = 360

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	551
PF03759	365	PRONE: PRONE (Plant-specific Rop nucleotide exchan	100.0

>PF03759 PRONE: PRONE (Plant-specific Rop nucleotide exchanger); InterPro: IPR005512 In plants, the small GTP-binding proteins called Rops work as signalling switches that control growth, development and plant responses to various environmental stimuli

Probab=100.00  E-value=1.1e-202  Score=1498.61  Aligned_cols=364  Identities=67%  Similarity=1.087  Sum_probs=290.0

Q ss_pred             hhHHHHHHHHHHHhhhccCCCCCCcchhHHHHHHHHHhHhHHhhhccccccCcCcHHHhhhhhhhccccccccceeEEee
Q 008837           96 LSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVELI  175 (551)
Q Consensus        96 ~se~E~MKErFaKLLLGEDMSGggKGV~tALAiSNAITNL~AtVFGelwrLEPL~~ekK~mWrREmdwLLsVsD~IVElv  175 (551)
                      .+|+||||||||||||||||||||||||||||||||||||||||||||||||||++|||+||||||||||||||||||||
T Consensus         2 ~se~e~mKErFaKLLLGEDmSG~gkGV~tAlAiSNAITNL~AtvFGe~~rLEPl~~ekk~~WrrEm~wLLsv~d~iVE~v   81 (365)
T PF03759_consen    2 PSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLAATVFGELWRLEPLSPEKKAMWRREMDWLLSVTDYIVELV   81 (365)
T ss_dssp             HHHHHHHHHHHHHHHTTTBTTSSS-S--HHHHHHHHHHHHHHHHHTT--SSS---HHHHHHHHHHHHHHHGGGGG-EEEE
T ss_pred             chHHHHHHHHHHHHhccCCCCCCCCcccHHHHHHHHHHHHHHHHhhhhhccCCCChHHHHHHHHhcceeecchhhhhhcc
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccccCCCcEEEeeecccccccccCchhhHHHhHHHHHHHhccCCCeeEeeeCCcccCCCCCCCCCCCCCCCCCCCCCC
Q 008837          176 PSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFREAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAG  255 (551)
Q Consensus       176 Ps~Q~~~dG~~~EvM~~rpRsDl~~NLPALrKLD~MLle~LDsF~dtEFWYvd~g~~~~~~~~~~~~~~~s~s~r~~~~R  255 (551)
                      |++|++|||+++|||+||||+|||||||||||||+||||+||||+|||||||++|+++ +.+ +      ++++|+..+|
T Consensus        82 Ps~Q~~~dG~~~EvM~~r~RsDl~~NlPALrKLD~MLie~LDsf~dtEFwYv~~g~~~-~~~-~------~~~~~~~~~r  153 (365)
T PF03759_consen   82 PSKQTFPDGTTMEVMTTRPRSDLYMNLPALRKLDAMLIEILDSFKDTEFWYVDQGIVA-DSD-S------SSSFRRSSQR  153 (365)
T ss_dssp             EEEEE-TTS-EEEEEEEEE-HHHHTHHHHHHHHHHHHHHHHHTTCS-SSEE--TT--------S------HHHHT-----
T ss_pred             cceeecCCCceEEEEecCccchhhcCcHHHHHHHHHHHHHHHhCCCCeeEEecCCccc-ccc-c------CccccCcccc
Confidence            9999999999999999999999999999999999999999999999999999999998 332 2      6789999999


Q ss_pred             CCCcccccCCcCCCCCCCHHHHHHHhHhhHHHHHHHHHHHHhhhhhhhcCCCchHHHhhcccCCccchhhHHHHhhhcCC
Q 008837          256 PEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQ  335 (551)
Q Consensus       256 ~eeKWWLP~P~VPp~GLSe~~RK~L~~qrd~~nQIlKAAmAINs~vL~EMeIPe~y~esLPKnGrasLGD~iYr~iT~d~  335 (551)
                      |++|||||+|||||+||||++||+|||||||||||||||||||++||+|||||++|+|+||||||+||||.|||+||+|+
T Consensus       154 ~~~KWWLP~p~VP~~GLse~~rK~L~~~rd~~~QilKAAmaIN~~vL~EMeiP~~y~esLPKnGrasLGd~iYr~it~~~  233 (365)
T PF03759_consen  154 QEEKWWLPVPRVPPNGLSEESRKWLQHQRDCVNQILKAAMAINSQVLAEMEIPESYLESLPKNGRASLGDSIYRYITSEQ  233 (365)
T ss_dssp             -CCCTTS--EE--TT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---HHHHHCS-SSHHHHHHHHHHHHCTSSS
T ss_pred             cCCcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHhcccccHHHHHHHHhccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CChHHHhhhcCCCchhhHHHHhhhhHHHHHHHHHHhhccccccCCCccCCCccccccccchhHHHHHHHHHHHHHHHHHH
Q 008837          336 FSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQNLK  415 (551)
Q Consensus       336 Fspe~lL~~ldLssEH~aLe~aNRiEAai~vWrrK~~~k~~~~~~~~ksSWg~~Vkd~~~d~dK~e~laeRAEtlL~~LK  415 (551)
                      |||||||+||||||||+|||+||||||||||||||+++++      +|+|||++|||++++.|||++|++|||+||+|||
T Consensus       234 Fspe~ll~~ldlssEH~~le~~NRvEAai~vWrrK~~~k~------~ksSWg~~vkdl~~~~dK~e~l~eRAEtlL~~LK  307 (365)
T PF03759_consen  234 FSPEQLLDCLDLSSEHKALELANRVEAAIYVWRRKICEKD------SKSSWGSMVKDLMSDGDKRELLAERAETLLLCLK  307 (365)
T ss_dssp             --HHHHHHTS--SSHHHHHHHHHHHHHHHHHHCH---------------------------HHHHHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHhcCCC------CccchhhhcccccccchHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999997      8999999999999999999999999999999999


Q ss_pred             hhCCCCCcchhhhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccch
Q 008837          416 LRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQR  473 (551)
Q Consensus       416 qRfPgLpQT~LD~sKIQyNkDVG~aILESYSRVLEsLAfnI~sRIdDVL~~D~l~~~~  473 (551)
                      |||||||||+||++|||||||||||||||||||||||||||++|||||||+|++++++
T Consensus       308 ~RfPgl~QT~LD~~KIQyNkDVG~aILESYSRVLEsLAfnI~sRIdDVL~~D~~~~~~  365 (365)
T PF03759_consen  308 QRFPGLPQTSLDISKIQYNKDVGQAILESYSRVLESLAFNILSRIDDVLYADDLTKNS  365 (365)
T ss_dssp             HHSTT----HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HhCCCCCchHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Confidence            9999999999999999999999999999999999999999999999999999999863

Rop proteins (Rho of plants, Rac-like and atRac in Arabidopsis thaliana (Mouse-ear cress)) belong to the Rho family of Ras-related GTP-binding proteins that turn on signalling pathways by switching from a GDP-bound inactive to a GTP-bound active conformation. Activation depends on guanine nucleotide exchange factors (GEFs) that catalyse the otherwise slow GDP dissociation for subsequent GTP binding. The plant-specific RopGEFs represent a unique family of exchange factor that display no homology to any known RhoGEFs from animals and fungi. They comprise a highly conserved catalytic domain termed PRONE (plant-specific Rop nucleotide exchanger) with exclusive substrate specificity for members of the Rop family. The PRONE domain has been shown to be necessary and sufficient to promote nucleotide release from Rop [, , ]. The PRONE domain can be divided into three highly conserved subdomains separated by two short stretches of variable amino acid residues [, ]. It is approximately 370 residues in length and displays an almost all alpha-helical structure except for a beta-turn that protrudes from the main body of the molecule. The overall structure of the PRONE domain can be divided into two subdomains, the first one including helices alpha1-5 and alpha13, the second alpha6-12 [].; GO: 0005089 Rho guanyl-nucleotide exchange factor activity; PDB: 2NTX_B 2NTY_B 2WBL_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	551
2nty_A	365	Rop4-Gdp-Prone8 Length = 365		1e-104
2ntx_A	365	Prone8 Length = 365		1e-91

>pdb|2NTY|A Chain A, Rop4-Gdp-Prone8 Length = 365

Iteration: 1
 Score =  374 bits (960), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/372 (50%), Positives = 259/372 (69%), Gaps = 26/372 (6%)
Query: 97  SEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMM 156
           +++E+MK+RFAKLLLGEDMSGGGKGV +ALA+SNAITNL+AS+FGE  KL+P+   ++  
Sbjct: 9   ADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQAR 68
Query: 157 WQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNIL 216
           W++E++WLL V+D IVE +PS Q    G   E+MVTR R DL +N+PAL+KLD ML++ L
Sbjct: 69  WKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTL 128
Query: 217 EGFR-EAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSEN 275
           + FR   EF YV R    G    + +T               +KWWLP   VPP GLSE 
Sbjct: 129 DNFRGHNEFWYVSRDSEEGQQARNDRT--------------NDKWWLPPVKVPPGGLSEP 174
Query: 276 MRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQ 335
            R  L   ++  +Q+ KAAMAIN+ VL+EMEIP +Y++SLPK+G+  LG+ +Y  IT + 
Sbjct: 175 SRRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEW 234
Query: 336 FSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVS 395
           F PE  LA LD+S+E+  L++ NRIEA+V IW      KR + TK  +SSWG  V     
Sbjct: 235 FDPEQFLAMLDMSTEHKVLDLKNRIEASVVIW------KRKLHTKDTKSSWGSAVS---- 284
Query: 396 DIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFN 455
            +E+ +L   RA+TIL  LK +FP LPQ++LD++KIQ+NKDVGQ++LESYSR++ESLA+ 
Sbjct: 285 -LEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYT 343
Query: 456 IMARIDDLLYVD 467
           +M+RI+D+LY D
Sbjct: 344 VMSRIEDVLYTD 355

>pdb|2NTX|A Chain A, Prone8 Length = 365

Iteration: 1
 Score =  333 bits (855), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 182/372 (48%), Positives = 247/372 (66%), Gaps = 26/372 (6%)
Query: 97  SEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMM 156
           ++ E  K+RFAKLLLGED SGGGKGV +ALA+SNAITNL+AS+FGE  KL+P    ++  
Sbjct: 9   ADXEXXKDRFAKLLLGEDXSGGGKGVSSALALSNAITNLAASIFGEQTKLQPXPQDRQAR 68
Query: 157 WQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNIL 216
           W++E++WLL V+D IVE +PS Q    G   E+ VTR R DL  N+PAL+KLD  L++ L
Sbjct: 69  WKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIXVTRQRGDLLXNIPALRKLDAXLIDTL 128
Query: 217 EGFR-EAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVPPNGLSEN 275
           + FR   EF YV R    G    + +T               +KWWLP   VPP GLSE 
Sbjct: 129 DNFRGHNEFWYVSRDSEEGQQARNDRT--------------NDKWWLPPVKVPPGGLSEP 174
Query: 276 MRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITADQ 335
            R  L   ++  +Q+ KAA AIN+ VL+E EIP +Y++SLPK+G+  LG+ +Y  IT + 
Sbjct: 175 SRRXLYFQKDSVTQVQKAAXAINAQVLSEXEIPESYIDSLPKNGRASLGDSIYKSITEEW 234
Query: 336 FSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVS 395
           F PE  LA LD S+E+  L++ NRIEA+V IW      KR + TK  +SSWG  V     
Sbjct: 235 FDPEQFLAXLDXSTEHKVLDLKNRIEASVVIW------KRKLHTKDTKSSWGSAVS---- 284
Query: 396 DIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFN 455
            +E+ +L   RA+TIL  LK +FP LPQ++LD++KIQ+NKDVGQ++LESYSR++ESLA+ 
Sbjct: 285 -LEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYT 343
Query: 456 IMARIDDLLYVD 467
           + +RI+D+LY D
Sbjct: 344 VXSRIEDVLYTD 355
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	551
2ntx_A	365	EMB|CAB41934.1, prone8; dimer, guanine nucleotide	0.0
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-13

>2ntx_A EMB|CAB41934.1, prone8; dimer, guanine nucleotide exchange factor, signaling protein; HET: MSE; 2.20A {Arabidopsis thaliana} PDB: 2nty_A* 2wbl_A Length = 365

 Score =  526 bits (1356), Expect = 0.0
 Identities = 189/388 (48%), Positives = 263/388 (67%), Gaps = 26/388 (6%)

Query: 90  KIPDSDLSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPL 149
           K  +   +++E+MK+RFAKLLLGEDMSGGGKGV +ALA+SNAITNL+AS+FGE  KL+P+
Sbjct: 2   KRSERQQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPM 61

Query: 150 ALRKKMMWQREMEWLLCVSDSIVELIPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLD 209
              ++  W++E++WLL V+D IVE +PS Q    G   E+MVTR R DL +N+PAL+KLD
Sbjct: 62  PQDRQARWKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLD 121

Query: 210 TMLVNILEGFR-EAEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPFAGPEEKWWLPFPMVP 268
            ML++ L+ FR   EF YV R    G    + +T               +KWWLP   VP
Sbjct: 122 AMLIDTLDNFRGHNEFWYVSRDSEEGQQARNDRT--------------NDKWWLPPVKVP 167

Query: 269 PNGLSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMY 328
           P GLSE  R  L   ++  +Q+ KAAMAIN+ VL+EMEIP +Y++SLPK+G+  LG+ +Y
Sbjct: 168 PGGLSEPSRRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIY 227

Query: 329 NYITADQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGG 388
             IT + F PE  LA LD+S+E+  L++ NRIEA+V IW++K        TK  +SSWG 
Sbjct: 228 KSITEEWFDPEQFLAMLDMSTEHKVLDLKNRIEASVVIWKRKLH------TKDTKSSWGS 281

Query: 389 KVKGFVSDIERSKLLAHRADTILQNLKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRV 448
            V      +E+ +L   RA+TIL  LK +FP LPQ++LD++KIQ+NKDVGQ++LESYSR+
Sbjct: 282 AV-----SLEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRI 336

Query: 449 MESLAFNIMARIDDLLYVDDATKQRAAA 476
           +ESLA+ +M+RI+D+LY D    ++   
Sbjct: 337 LESLAYTVMSRIEDVLYTDTLALKQTLL 364

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 71.4 bits (174), Expect = 4e-13
 Identities = 69/505 (13%), Positives = 143/505 (28%), Gaps = 147/505 (29%)

Query: 86  NDTEKIPDSDLSEIE--------LMKERFAKLLLGEDMSGGGKGVCTALAISNA--ITNL 135
           ND +     ++S ++        L++ R AK +L + + G GK         +      +
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180

Query: 136 SASVFGELW--------------KLEPLALRKKMMWQREMEWLLCVSDSIVELIPSLQEF 181
              +F   W               L+ L  +    W    +    +   I  +   L+  
Sbjct: 181 DFKIF---WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237

Query: 182 PGGGTFEVMVTRPRSDLYVNLPALKKLDTMLV---NILEGFREAEF-CYV-----DRGLI 232
                   + ++P    Y N   L  L    V        F      C +      + + 
Sbjct: 238 --------LKSKP----YEN--CLLVLLN--VQNAKAWNAF---NLSCKILLTTRFKQVT 278

Query: 233 VGGGGDDTKTFPSCSSSSRPFAGPE-----EKW-WLPFPMVPP----------NGLSENM 276
                  T         S      E      K+       +P           + ++E++
Sbjct: 279 DFLSAATTTHISL-DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI 337

Query: 277 RE---RLQQARECTSQILKAAMAINSNVLAEME----------------IPNAYLESL-P 316
           R+        +      L   +  + NVL   E                IP   L  +  
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397

Query: 317 KSGKECLGEIM---YNYITADQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQN 373
              K  +  ++   + Y   ++   ES ++   +   Y  L++    E A+H        
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI---YLELKVKLENEYALH-------- 446

Query: 374 KRII---RTKSGRSSWGGKVK----------GF-VSDIERSKLLAHRAD---TILQNL-- 414
           + I+          S                G  + +IE       R      +  +   
Sbjct: 447 RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH----PERMTLFRMVFLDFRF 502

Query: 415 ---KLRFPSLPQTA--------LDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDL 463
              K+R  S    A          +    Y   +  +    Y R++ ++  + + +I++ 
Sbjct: 503 LEQKIRHDSTAWNASGSILNTLQQLKF--YKPYICDND-PKYERLVNAI-LDFLPKIEEN 558

Query: 464 LYVDDATK--QRA-AAETASLYDQT 485
           L     T   + A  AE  +++++ 
Sbjct: 559 LICSKYTDLLRIALMAEDEAIFEEA 583

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	551
2ntx_A	365	EMB|CAB41934.1, prone8; dimer, guanine nucleotide	100.0

>2ntx_A EMB|CAB41934.1, prone8; dimer, guanine nucleotide exchange factor, signaling protein; HET: MSE; 2.20A {Arabidopsis thaliana} PDB: 2nty_A* 2wbl_A

Probab=100.00  E-value=6.3e-198  Score=1459.77  Aligned_cols=355  Identities=52%  Similarity=0.893  Sum_probs=307.1

Q ss_pred             ChhHHHHHHHHHHHhhhccCCCCCCcchhHHHHHHHHHhHhHHhhhccccccCcCcHHHhhhhhhhccccccccceeEEe
Q 008837           95 DLSEIELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSASVFGELWKLEPLALRKKMMWQREMEWLLCVSDSIVEL  174 (551)
Q Consensus        95 ~~se~E~MKErFaKLLLGEDMSGggKGV~tALAiSNAITNL~AtVFGelwrLEPL~~ekK~mWrREmdwLLsVsD~IVEl  174 (551)
                      ..+|+||||||||||||||||||||||||||||||||||||||||||||||||||++|||+|||||||||||||||||||
T Consensus         7 ~~se~e~mKErFaKLLLGEDmSG~gkGV~tAlAiSNAITNL~AsvFGe~~rLEPl~~ekK~~WrrEmdwLLsv~d~IVE~   86 (365)
T 2ntx_A            7 QQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQARWKKEIDWLLSVTDHIVEF   86 (365)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCTTSSCCSCCHHHHHHHHHHHHHHHHHTTC-CCCCCCHHHHHHHHHHHHHHHGGGGGCEEE
T ss_pred             CchHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHhhhhHHHHHHhhhhhccCCCChHHHHHHHHhcceeeeccceeEEe
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCccccCCCcEEEeeecccccccccCchhhHHHhHHHHHHHhccCC-CeeEeeeCCcccCCCCCCCCCCCCCCCCCCCC
Q 008837          175 IPSLQEFPGGGTFEVMVTRPRSDLYVNLPALKKLDTMLVNILEGFRE-AEFCYVDRGLIVGGGGDDTKTFPSCSSSSRPF  253 (551)
Q Consensus       175 vPs~Q~~~dG~~~EvM~~rpRsDl~~NLPALrKLD~MLle~LDsF~d-tEFWYvd~g~~~~~~~~~~~~~~~s~s~r~~~  253 (551)
                      |||+|++|||+++|||+||||+|||||||||||||+||||+||||+| ||||||++|+.  +            +.++..
T Consensus        87 vPs~Q~~~dG~~~EvM~~r~RsDl~~NlPALrKLD~MLle~LDsf~d~tEFWYv~~g~~--~------------~~~~~~  152 (365)
T 2ntx_A           87 VPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLDNFRGHNEFWYVSRDSE--E------------GQQARN  152 (365)
T ss_dssp             EEC----------CCEEEEECHHHHTHHHHHHHHHHHHHHHHHGGGSCCCCEEC--------------------------
T ss_pred             ccccccCCCCceEEEeeccccchhhcCcHHHHHHHHHHHHHHHhCCCCCeeEEecCCCC--c------------cccCCc
Confidence            99999999999999999999999999999999999999999999999 99999999941  1            124568


Q ss_pred             CCCCCcccccCCcCCCCCCCHHHHHHHhHhhHHHHHHHHHHHHhhhhhhhcCCCchHHHhhcccCCccchhhHHHHhhhc
Q 008837          254 AGPEEKWWLPFPMVPPNGLSENMRERLQQARECTSQILKAAMAINSNVLAEMEIPNAYLESLPKSGKECLGEIMYNYITA  333 (551)
Q Consensus       254 ~R~eeKWWLP~P~VPp~GLSe~~RK~L~~qrd~~nQIlKAAmAINs~vL~EMeIPe~y~esLPKnGrasLGD~iYr~iT~  333 (551)
                      ||||||||||+|||||+||||++||+|||||||||||||||||||++||+|||||++|+|+||||||+||||.|||+||+
T Consensus       153 ~r~eeKWWLP~p~VP~~GLSe~~RK~L~~qrd~~~QIlKAAmAIN~~vL~EMeiP~~y~esLPKnGrasLGd~iYr~it~  232 (365)
T 2ntx_A          153 DRTNDKWWLPPVKVPPGGLSEPSRRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITE  232 (365)
T ss_dssp             --------CCCEECCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHSCSCHHHHHCHHHHHHHTC
T ss_pred             ccccccccCCCCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhHhHhhcCCCcHHHHHhcccccccccHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCChHHHhhhcCCCchhhHHHHhhhhHHHHHHHHHHhhccccccCCCccCCCccccccccchhHHHHHHHHHHHHHHHH
Q 008837          334 DQFSPESLLAYLDLSSEYTTLEIANRIEAAVHIWRQKYQNKRIIRTKSGRSSWGGKVKGFVSDIERSKLLAHRADTILQN  413 (551)
Q Consensus       334 d~Fspe~lL~~ldLssEH~aLe~aNRiEAai~vWrrK~~~k~~~~~~~~ksSWg~~Vkd~~~d~dK~e~laeRAEtlL~~  413 (551)
                      |+|||||||+||||+|||+|||+|||||||||+||||++.++      +|+|||.+|     +.|||++|++|||+||+|
T Consensus       233 d~Fspe~ll~~ldlssEH~~le~anRiEAsi~vWrrk~~~k~------~kssW~~~~-----~~dK~~~l~eRAEtlL~~  301 (365)
T 2ntx_A          233 EWFDPEQFLAMLDMSTEHKVLDLKNRIEASVVIWKRKLHTKD------TKSSWGSAV-----SLEKRELFEERAETILVL  301 (365)
T ss_dssp             SSCCHHHHHHTSCCCSHHHHHHHHHHHHHHHHHHHHC-------------------------CHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHhhcCCC------CCCCCcccc-----chhHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999887      899997654     489999999999999999


Q ss_pred             HHhhCCCCCcchhhhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccchh
Q 008837          414 LKLRFPSLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDLLYVDDATKQRA  474 (551)
Q Consensus       414 LKqRfPgLpQT~LD~sKIQyNkDVG~aILESYSRVLEsLAfnI~sRIdDVL~~D~l~~~~~  474 (551)
                      |||||||||||+||++|||||||||||||||||||||||||||++|||||||+|++++++.
T Consensus       302 LKqRfPglpQTsLD~sKIQyNkDVG~aILESYSRvLesLAf~I~sRIdDvL~~D~~~~~~~  362 (365)
T 2ntx_A          302 LKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYTVMSRIEDVLYTDTLALKQT  362 (365)
T ss_dssp             HHHHCTTCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHhCCCCCchHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcc
Confidence            9999999999999999999999999999999999999999999999999999999999875

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00