Citrus Sinensis ID: 009010

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540------

MLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKHSYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVPLNQQFHVSRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLHTSSNDWDTGASGGEMIVNHQQSSPQVDAVVPRVENGNGGGAMQKKVRFRGVGCNNRELEELEEARESGLAYMMGNTCVLASETSSYLKKFVINIVYGFLRRNCRRPATALGVPNASLIEVGMVYRV

cEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHccccEEEEEccHHHHcccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccEEEcHHHHHHHHHHHHHEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccccccccEEEEEccccccHHHHHHHHHHcccccEEEEEEEEEEEcccccccccEEEEEEEccccccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHcccEEEEEccEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEc

cHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHHcccccEEEccEEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHEEEEHcccccHHHHHHHccccccEEcccEEEEHHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEcEEEEc

MLVGLFalqhfgthrvgflFAPVLLAWLLCISIVGFyntvrwnpgvvralspYYVYIFFKKagkdgwsslGGVVLCVTGAEAMfadlghfshlpiRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFkaipeavfwPVFIIATLATAVASQAIISATFSIISQCralscfprvkimhtsnqihgqiyipemNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAkvhkggwlpLVFSLVTLSIMCIWQygtlkkhsyeSHNKVCLDMLLTvgqnhgvtrvpGICLIYsnvisgvppmfahfvtnfpAFHQILIFVTLqsltvpyvplnqqfhvsrigpqefhFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLhtssndwdtgasggemivnhqqsspqvdavvprvengngggamQKKVRFrgvgcnnreLEELEEARESGLAYMMGNTCVLASETSSYLKKFVINIVYGFLrrncrrpatalgvpnaslievgmvyrv

MLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKHSYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVPLNQQFHVSRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLHTSSNDWDTGASGGEMIVNHQQSSPQVDAVVPRVEngngggamqkkvrfrgvgcnnrELEELEEARESGLAYMMGNTCVLASETSSYLKKFVINIVYGFLRRNCrrpatalgvpnaslievgmvyrv

MLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKHSYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVPLNQQFHVSRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLHTSSNDWDTGASGGEMIVNHQQSSPQVDAVVPRVENGNGGGAMQKKVRFRGVGCNNreleeleeareSGLAYMMGNTCVLASETSSYLKKFVINIVYGFLRRNCRRPATALGVPNASLIEVGMVYRV

*LVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKHSYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVPLNQQFHVSRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLHTSSNDWD***************************************RFRGVGCN************SGLAYMMGNTCVLASETSSYLKKFVINIVYGFLRRNCRRPATALGVPNASLIEVGMVY**

MLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKHSYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVPLNQQFHVSRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLHT**********************************************************ELEEARESGLAYMMGNTCVLASETSSYLKKFVINIVYGFLRRNCRRPATALGVPNASLIEVGMVYRV

MLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKHSYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVPLNQQFHVSRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLHTSSND**************************************KKVRFRGVGCNNRELEELEEARESGLAYMMGNTCVLASETSSYLKKFVINIVYGFLRRNCRRPATALGVPNASLIEVGMVYRV

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		546	2.2.26 [Sep-21-2011]
Q652J4		778	Probable potassium transp	yes	no	1.0	0.701	0.591	0.0
O22397		712	Potassium transporter 1 O	yes	no	0.930	0.713	0.523	1e-174
Q8H3P9		811	Potassium transporter 7 O	no	no	0.998	0.672	0.487	1e-170
Q6YWQ4		770	Potassium transporter 25	no	no	1.0	0.709	0.497	1e-166
Q942X8		783	Probable potassium transp	no	no	1.0	0.697	0.468	1e-164
Q8W4I4		782	Potassium transporter 6 O	no	no	1.0	0.698	0.505	1e-164
Q67VS5		843	Potassium transporter 10	no	no	1.0	0.647	0.467	1e-162
Q9LD18		789	Potassium transporter 4 O	no	no	1.0	0.692	0.478	1e-162
Q5ZC87		808	Probable potassium transp	no	no	0.998	0.674	0.484	1e-160
Q7XIV8		788	Probable potassium transp	no	no	0.990	0.686	0.478	1e-160

>sp\|Q652J4\|HAK13_ORYSJ Probable potassium transporter 13 OS=Oryza sativa subsp. japonica GN=HAK13 PE=2 SV=1	Back alignment and function desciption

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/571 (59%), Positives = 414/571 (72%), Gaps = 25/571 (4%)

Query: 1   MLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFK 60
           +L+GLFALQH+GT RVGFLFAP+L++WL CI  +G YN ++WNP V+RALSPYY+Y FF+
Sbjct: 208 ILIGLFALQHYGTRRVGFLFAPILISWLTCIGGIGIYNIIKWNPSVIRALSPYYIYNFFR 267

Query: 61  KAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTK 120
           KAGKDGWSSLGG+VLC+TGAEAMFADLGHFS L +R+ F  VVYPCL+LAYMGEAA+ +K
Sbjct: 268 KAGKDGWSSLGGIVLCLTGAEAMFADLGHFSKLSLRLGFTIVVYPCLVLAYMGEAAYLSK 327

Query: 121 HKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMH 180
           H+EDL+ SF+KA+P+ VFWPV  IATLATAV SQAIISATFSIISQCRAL CFPR+K++H
Sbjct: 328 HREDLQSSFYKALPDRVFWPVLFIATLATAVGSQAIISATFSIISQCRALGCFPRIKVVH 387

Query: 181 TSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVM 240
           TS+ +HGQIYIPE+NW+LM  CL V +GFRDT+MI NAYGLAVI VM  TTCLMFL+I  
Sbjct: 388 TSSHVHGQIYIPEVNWVLMSLCLAVTIGFRDTEMIGNAYGLAVILVMCATTCLMFLVITT 447

Query: 241 VWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKH 300
           VW R V+ A AF VVFGS+ELLYLSACLAKV  GGWLPL+ SL TL +M  W YGT  K 
Sbjct: 448 VWNRWVVWAAAFTVVFGSVELLYLSACLAKVPHGGWLPLLLSLTTLLVMSTWHYGTAMKQ 507

Query: 301 SYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFV 360
            +E  NKVCLD  L +    G+ RVPG+  +YS+  +GVPPMFAHFVTNFPAFH++LIFV
Sbjct: 508 QHEVQNKVCLDHFLGLSSGIGLVRVPGVGFVYSSTTNGVPPMFAHFVTNFPAFHRVLIFV 567

Query: 361 TLQSLTVPYVPLNQQFHVSRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLH 420
           +LQ+L VP V   ++F V RIG      F CIVRYGYK+ R + + FE+ L+  V EFL 
Sbjct: 568 SLQTLAVPKVSPEERFLVGRIGSPANRLFRCIVRYGYKEGRWDHFNFENQLLMKVVEFLR 627

Query: 421 TSS------NDWDTGASGGE---MIV--------NHQQSSPQVDAVVPRVE-NGNGGGAM 462
                     D  + A+ GE   M V           Q +          E +   GG  
Sbjct: 628 HQDGSGGGGGDRMSAAASGEDEAMSVIPATSSSGGSNQHAFDAGTTTSSCEIDATAGGGG 687

Query: 463 QKKVRFRG-------VGCNNRELEELEEARESGLAYMMGNTCVLASETSSYLKKFVINIV 515
           ++KVRF               E++EL E +E+G++YM+G+TCV A E+SS +KKF +N+V
Sbjct: 688 RRKVRFDNDGGGGGEEEEEAAEVKELMEEKEAGVSYMIGHTCVFAHESSSAVKKFAVNVV 747

Query: 516 YGFLRRNCRRPATALGVPNASLIEVGMVYRV 546
           YGFLRRN RRPA  LG+P+ SLIEVGM YRV
Sbjct: 748 YGFLRRNSRRPAVVLGIPHTSLIEVGMAYRV 778

High-affinity potassium transporter.
Oryza sativa subsp. japonica (taxid: 39947)

>sp\|O22397\|POT1_ARATH Potassium transporter 1 OS=Arabidopsis thaliana GN=POT1 PE=1 SV=2	Back alignment and function description

>sp\|Q8H3P9\|HAK7_ORYSJ Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3	Back alignment and function description

>sp\|Q6YWQ4\|HAK25_ORYSJ Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1	Back alignment and function description

>sp\|Q942X8\|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1	Back alignment and function description

>sp\|Q8W4I4\|POT6_ARATH Potassium transporter 6 OS=Arabidopsis thaliana GN=POT6 PE=2 SV=1	Back alignment and function description

>sp\|Q67VS5\|HAK10_ORYSJ Potassium transporter 10 OS=Oryza sativa subsp. japonica GN=HAK10 PE=2 SV=1	Back alignment and function description

>sp\|Q9LD18\|POT4_ARATH Potassium transporter 4 OS=Arabidopsis thaliana GN=POT4 PE=1 SV=2	Back alignment and function description

>sp\|Q5ZC87\|HAK3_ORYSJ Probable potassium transporter 3 OS=Oryza sativa subsp. japonica GN=HAK3 PE=2 SV=1	Back alignment and function description

>sp\|Q7XIV8\|HAK9_ORYSJ Probable potassium transporter 9 OS=Oryza sativa subsp. japonica GN=HAK9 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		546
224075252		731	predicted protein [Populus trichocarpa]	0.998	0.745	0.720	0.0
359495323		727	PREDICTED: probable potassium transporte	0.965	0.724	0.717	0.0
302143247		708	unnamed protein product [Vitis vinifera]	0.930	0.717	0.701	0.0
255544650		732	Potassium transporter, putative [Ricinus	0.963	0.718	0.667	0.0
147789997		729	hypothetical protein VITISV_041093 [Viti	0.963	0.721	0.652	0.0
359494487		774	PREDICTED: probable potassium transporte	0.963	0.679	0.652	0.0
296082674		679	unnamed protein product [Vitis vinifera]	0.963	0.774	0.652	0.0
224081413		683	predicted protein [Populus trichocarpa]	0.921	0.736	0.631	0.0
357123393		757	PREDICTED: probable potassium transporte	0.996	0.718	0.611	0.0
242093882		779	hypothetical protein SORBIDRAFT_10g02696	0.989	0.693	0.584	0.0

>gi\|224075252\|ref\|XP_002304582.1\| predicted protein [Populus trichocarpa] gi\|222842014\|gb\|EEE79561.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/547 (72%), Positives = 457/547 (83%), Gaps = 2/547 (0%)

Query: 1   MLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFK 60
           +LVGLFALQH GTHRVGFLFAP++L WLL IS VG YN ++WNP VV ALSPYYVY  FK
Sbjct: 186 ILVGLFALQHIGTHRVGFLFAPIILLWLLSISGVGIYNIIQWNPRVVSALSPYYVYKLFK 245

Query: 61  KAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTK 120
             GKDGW+SLGG+VLC+TGAEAMFADLGHFS L IRIAF  ++YP LILAYMGEAA+ +K
Sbjct: 246 LTGKDGWTSLGGIVLCITGAEAMFADLGHFSQLSIRIAFTAIIYPSLILAYMGEAAYLSK 305

Query: 121 HKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMH 180
           HKEDL+RSF++AIPE VFWPVFIIATLAT VASQA+ISATFSIISQC AL CFPRVKI+H
Sbjct: 306 HKEDLQRSFYRAIPEVVFWPVFIIATLATVVASQAVISATFSIISQCWALKCFPRVKIIH 365

Query: 181 TSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVM 240
           TSNQ+HGQIYIPE+NW+LM+FCL VV+GFRDTDMIANAYGL V+ VMFVTTCLMFL+IVM
Sbjct: 366 TSNQMHGQIYIPEVNWMLMVFCLLVVIGFRDTDMIANAYGLTVVIVMFVTTCLMFLVIVM 425

Query: 241 VWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKH 300
           VWKR +L A  FV VFG +ELLYLS+CLAKV KGGW+PL+FSL+ LS+M IW YGTL+K 
Sbjct: 426 VWKRNILAAFIFVTVFGFVELLYLSSCLAKVAKGGWIPLIFSLIVLSVMYIWHYGTLQKQ 485

Query: 301 SYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFV 360
           S+ESHN+  LDMLL++G N G+ RV GI LIY+NV+SG+PPMF+HFVT+FPAFHQ+LIFV
Sbjct: 486 SFESHNRTSLDMLLSLGPNVGINRVRGIGLIYTNVLSGIPPMFSHFVTSFPAFHQVLIFV 545

Query: 361 TLQSLTVPYVPLNQQFHVSRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLH 420
           T Q LT P V  NQ+F VSRIGP EF  + CIVR+GYKDARK+ YAFE+ LI+TV  FL 
Sbjct: 546 TFQFLTTPRVSANQRFIVSRIGPAEFRLYRCIVRFGYKDARKDSYAFETDLIETVRVFLQ 605

Query: 421 TSSNDWDTGASGGEMIVNHQQSSPQVDAVVPRVENGNGGGAMQ-KKVRFRGVGCNNRELE 479
             S+D D   S  EM VN  +S    D V  R ENG+G G  + K+VRF GV  N++ELE
Sbjct: 606 HESDDGDARDSVSEMPVNQHESDCLRDDVSMRAENGSGAGLTRCKRVRFCGVD-NSKELE 664

Query: 480 ELEEARESGLAYMMGNTCVLASETSSYLKKFVINIVYGFLRRNCRRPATALGVPNASLIE 539
           +LE+ARE+GLAYMMGNTCVLA ETSS++KKF INIVYGFLRRNCR P+TALGVP+ SLIE
Sbjct: 665 DLEDAREAGLAYMMGNTCVLARETSSFVKKFAINIVYGFLRRNCRSPSTALGVPHTSLIE 724

Query: 540 VGMVYRV 546
           VGM YRV
Sbjct: 725 VGMAYRV 731

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359495323\|ref\|XP_002271119.2\| PREDICTED: probable potassium transporter 13-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|302143247\|emb\|CBI20542.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255544650\|ref\|XP_002513386.1\| Potassium transporter, putative [Ricinus communis] gi\|223547294\|gb\|EEF48789.1\| Potassium transporter, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|147789997\|emb\|CAN62930.1\| hypothetical protein VITISV_041093 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359494487\|ref\|XP_002265329.2\| PREDICTED: probable potassium transporter 13-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|296082674\|emb\|CBI21679.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224081413\|ref\|XP_002306400.1\| predicted protein [Populus trichocarpa] gi\|222855849\|gb\|EEE93396.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|357123393\|ref\|XP_003563395.1\| PREDICTED: probable potassium transporter 13-like [Brachypodium distachyon]	Back alignment and taxonomy information

>gi\|242093882\|ref\|XP_002437431.1\| hypothetical protein SORBIDRAFT_10g026960 [Sorghum bicolor] gi\|241915654\|gb\|EER88798.1\| hypothetical protein SORBIDRAFT_10g026960 [Sorghum bicolor]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		546
TAIR\|locus:2045639		712	KT1 "potassium transporter 1"	0.771	0.591	0.596	5.2e-162
TAIR\|locus:2016139		782	KUP6 "K+ uptake permease 6" [A	0.794	0.554	0.561	1.3e-152
TAIR\|locus:2078688		789	KUP3 "AT3G02050" [Arabidopsis	0.811	0.561	0.517	3.6e-150
TAIR\|locus:2185515		781	KUP8 "potassium uptake 8" [Ara	0.771	0.539	0.549	1.6e-147
TAIR\|locus:2061838		794	KT2 "potassium transporter 2"	0.774	0.532	0.522	2e-145
TAIR\|locus:2128399		775	TRH1 "TINY ROOT HAIR 1" [Arabi	0.780	0.549	0.507	9.4e-137
TAIR\|locus:2029589		796	KUP10 "K+ uptake permease 10"	0.827	0.567	0.469	3e-129
TAIR\|locus:2195688		827	AT1G60160 [Arabidopsis thalian	0.989	0.652	0.435	4e-129
TAIR\|locus:2044717		793	KUP11 "K+ uptake permease 11"	0.992	0.683	0.417	5.7e-123
TAIR\|locus:2119812		823	KUP9 "AT4G19960" [Arabidopsis	0.833	0.552	0.429	3.2e-121

TAIR\|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1446 (514.1 bits), Expect = 5.2e-162, Sum P(2) = 5.2e-162
 Identities = 251/421 (59%), Positives = 336/421 (79%)

Query:     1 MLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFK 60
             +LV +F++Q +GTHRV F+FAP+  AWLL IS +G YNT++WNP +V ALSP Y+Y F +
Sbjct:   205 ILVAIFSVQRYGTHRVAFIFAPISTAWLLSISSIGVYNTIKWNPRIVSALSPVYMYKFLR 264

Query:    61 KAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTK 120
               G +GW SLGGVVL +TG E MFADLGHFS L I++AF+  VYPCLILAYMGEAAF +K
Sbjct:   265 STGVEGWVSLGGVVLSITGVETMFADLGHFSSLSIKVAFSFFVYPCLILAYMGEAAFLSK 324

Query:   121 HKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMH 180
             H ED+++SF+KAIPE VFWPVFI+AT A  V SQA+ISATFSIISQC AL CFPRVKI+H
Sbjct:   325 HHEDIQQSFYKAIPEPVFWPVFIVATFAAVVGSQAVISATFSIISQCCALDCFPRVKIIH 384

Query:   181 TSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVM 240
             TS++IHGQIYIPE+NW+LM  CL V +G RDT+M+ +AYGLAV +VM VTTCLM L++ +
Sbjct:   385 TSSKIHGQIYIPEVNWMLMCLCLAVTIGLRDTNMMGHAYGLAVTSVMLVTTCLMTLVMTI 444

Query:   241 VWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKH 300
             VWK++++  +AFVV FGS+ELLY S+C+ KV +GGW+P++ SL  +++M IW YGT KKH
Sbjct:   445 VWKQRIITVLAFVVFFGSIELLYFSSCVYKVPEGGWIPILLSLTFMAVMYIWNYGTTKKH 504

Query:   301 SYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFV 360
              ++  NKV +D ++++G + G+ RVPGI L+YSN+++GVP +F HFVTN PAFH+IL+FV
Sbjct:   505 EFDVENKVSMDRIVSLGPSIGMVRVPGIGLVYSNLVTGVPAVFGHFVTNLPAFHKILVFV 564

Query:   361 TLQSLTVPYVPLNQQFHVSRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLH 420
              ++S+ VPYV   ++F +SR+GP+E+  F  +VRYGY+D  +E+Y FES L+  + EF+ 
Sbjct:   565 CVKSVQVPYVGEEERFVISRVGPKEYGMFRSVVRYGYRDVPREMYDFESRLVSAIVEFVE 624

Query:   421 T 421
             T
Sbjct:   625 T 625

GO:0005886 "plasma membrane" evidence=ISM

GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;IGI;ISS

GO:0016020 "membrane" evidence=IEA;NAS

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IC

TAIR\|locus:2016139 KUP6 "K+ uptake permease 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2128399 TRH1 "TINY ROOT HAIR 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2119812 KUP9 "AT4G19960" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O22397	POT1_ARATH	No assigned EC number	0.5238	0.9304	0.7134	yes	no
Q652J4	HAK13_ORYSJ	No assigned EC number	0.5919	1.0	0.7017	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		546
PLN00148		785	PLN00148, PLN00148, potassium transporter; Provisi	0.0
PLN00149		779	PLN00149, PLN00149, potassium transporter; Provisi	0.0
PLN00150		779	PLN00150, PLN00150, potassium ion transporter fami	0.0
PLN00151		852	PLN00151, PLN00151, potassium transporter; Provisi	0.0
TIGR00794		688	TIGR00794, kup, potassium uptake protein	0.0
pfam02705		534	pfam02705, K_trans, K+ potassium transporter	1e-168
COG3158		627	COG3158, Kup, K+ transporter [Inorganic ion transp	1e-105
PRK10745		622	PRK10745, trkD, potassium transport protein Kup; P	2e-77

>gnl\|CDD\|215077 PLN00148, PLN00148, potassium transporter; Provisional	Back alignment and domain information

 Score =  683 bits (1763), Expect = 0.0
 Identities = 295/583 (50%), Positives = 408/583 (69%), Gaps = 38/583 (6%)

Query: 1   MLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFK 60
           +LVGLFALQH GTHRV F+FAP+++ WLL I  +G YN + WNP ++ ALSPYY+  FF+
Sbjct: 204 ILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYIIKFFR 263

Query: 61  KAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTK 120
             GKDGW SLGG++L +TG EAMFADLGHF+   IR+AFATV+YPCL++ YMG+AAF +K
Sbjct: 264 VTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSK 323

Query: 121 HKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMH 180
           +   +  SF+ +IP+ VFWPVF+IATLA  V SQA+I+ATFSI+ QC AL CFPRVK++H
Sbjct: 324 NIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVH 383

Query: 181 TSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVM 240
           TS  I+GQIYIPE+NWILMI  L V +GFRDT +I NAYGLA +TVMF+TT LM L+I+ 
Sbjct: 384 TSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIF 443

Query: 241 VWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKH 300
           VW++ +++A  F++ FG +E +YLSA L KV +GGW+PLV S + +SIM IW YGT KK+
Sbjct: 444 VWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGTRKKY 503

Query: 301 SYESHNKVCLDMLLTVGQNHGVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFV 360
           +++ HNKV L  LL +G + G+ RVPGI LIYS + +GVP +F+HFVTN PAFH++L+FV
Sbjct: 504 NFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFV 563

Query: 361 TLQSLTVPYVPLNQQFHVSRIGPQEFHFFHCIVRYGYKDARKEIYAFESHLIDTVAEFLH 420
            ++S+ VPYV   ++F + R+ P+ +  + CIVRYGYKD +++   FE+ L+ ++AEF+ 
Sbjct: 564 CVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQ 623

Query: 421 TSSNDWDTGAS-----GGEMIVNHQQSSPQVDAVVPRVENG------------------- 456
             + +  + AS      G M V   +   Q  +++   E                     
Sbjct: 624 MEAEEPQSSASESSSNDGRMAVISTRDV-QSSSLLMVSEQELADIDDSIQSSKSLTLQSL 682

Query: 457 -------NGGGAMQKKVRFR-----GVGCNNR-ELEELEEARESGLAYMMGNTCVLASET 503
                  N G + +++VRF+     G+  + R EL +L EA+E+G+AY+MG++ V A  +
Sbjct: 683 QSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYVKARRS 742

Query: 504 SSYLKKFVINIVYGFLRRNCRRPATALGVPNASLIEVGMVYRV 546
           SS+LKK  I+I Y FLR+NCR PA AL +P+ SLIEVGM+Y V
Sbjct: 743 SSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785

Length = 785

>gnl\|CDD\|177753 PLN00149, PLN00149, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional	Back alignment and domain information

>gnl\|CDD\|215079 PLN00151, PLN00151, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|129876 TIGR00794, kup, potassium uptake protein	Back alignment and domain information

>gnl\|CDD\|217193 pfam02705, K_trans, K+ potassium transporter	Back alignment and domain information

>gnl\|CDD\|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|182693 PRK10745, trkD, potassium transport protein Kup; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		546
PLN00148		785	potassium transporter; Provisional	100.0
PLN00150		779	potassium ion transporter family protein; Provisio	100.0
PLN00149		779	potassium transporter; Provisional	100.0
PLN00151		852	potassium transporter; Provisional	100.0
TIGR00794		688	kup potassium uptake protein. Proteins of the KUP	100.0
PRK10745		622	trkD potassium transport protein Kup; Provisional	100.0
COG3158		627	Kup K+ transporter [Inorganic ion transport and me	100.0
PF02705		534	K_trans: K+ potassium transporter; InterPro: IPR00	100.0
TIGR00911		501	2A0308 L-type amino acid transporter.	87.13

>PLN00148 potassium transporter; Provisional	Back alignment and domain information

Probab=100.00  E-value=8.6e-178  Score=1466.14  Aligned_cols=546  Identities=53%  Similarity=0.998  Sum_probs=501.9

Q ss_pred             CEEEeeecccccccccccchhhHHHHHHHHHHHHHHHhhccCCcceeeecCHHHHHHHHHhcCccceeeccceeheecch
Q 009010            1 MLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGWSSLGGVVLCVTGA   80 (546)
Q Consensus         1 ILv~LF~iQ~~GT~~ig~~FgPim~vWF~~l~~~Gi~~i~~~~P~Vl~AlnP~ya~~f~~~~~~~~~~~LG~V~L~~TGa   80 (546)
                      ||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||.+||.+||+|+||+||+
T Consensus       204 ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGa  283 (785)
T PLN00148        204 ILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYIIKFFRVTGKDGWISLGGILLSITGT  283 (785)
T ss_pred             HHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcCHHHHHHHHHhCCCceEEeecchheeccch
Confidence            68899999999999999999999999999999999999999889999999999999999999999999999999999999


Q ss_pred             hHhhhccCCCCCcceeehhhhhHhHHHHHhhccccchhccccccccccchhcccccchhHHHHHHHHHHHHhhhhhhhch
Q 009010           81 EAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISAT  160 (546)
Q Consensus        81 EALyADmGHFg~~~Ir~aw~~~V~P~LilnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~vlAtlAtIIASQA~Isg~  160 (546)
                      |||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+
T Consensus       284 EALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~  363 (785)
T PLN00148        284 EAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITAT  363 (785)
T ss_pred             hhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHcCCCCceeEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHhhhhhhhhhHHHHHHHHHHHHHHH
Q 009010          161 FSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVM  240 (546)
Q Consensus       161 FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNwlL~~~~l~vvl~F~~S~~l~~AYGiAVt~~M~iTT~L~~~v~~~  240 (546)
                      ||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||++||++||+|+++||+.
T Consensus       364 FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~  443 (785)
T PLN00148        364 FSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIF  443 (785)
T ss_pred             HHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcchhHHHHHHHHHHHHHHHHHHHhhhccccCccHHHHHHHHHhhhhhhhhhhHHHHHhhhhccCCChHHHHhhccCC
Q 009010          241 VWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKHSYESHNKVCLDMLLTVGQNH  320 (546)
Q Consensus       241 ~w~~~~~~~~~~~~~f~~id~~f~~anl~K~~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~  320 (546)
                      +|||+++++++++++|+++|++||+||+.||+||||+||++|++++++|++||||++++++++.+++++++++.++.++.
T Consensus       444 ~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~  523 (785)
T PLN00148        444 VWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSL  523 (785)
T ss_pred             HhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998888777


Q ss_pred             CCccccceEEEEeCCCCCChhhhHhhhhcCCccceEEEEEEEeeecccccCCCceEEEEEecCCCccEEEEEEEeeeecc
Q 009010          321 GVTRVPGICLIYSNVISGVPPMFAHFVTNFPAFHQILIFVTLQSLTVPYVPLNQQFHVSRIGPQEFHFFHCIVRYGYKDA  400 (546)
Q Consensus       321 ~~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfl~i~~~~vP~V~~~eR~~v~~l~~~~~g~~rv~~ryGf~e~  400 (546)
                      ++.|+||+|+|||++.+++|++|.||++|||++||++|||||+++|+|+||++||+++++++++++++|||++||||||.
T Consensus       524 ~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~  603 (785)
T PLN00148        524 GIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDI  603 (785)
T ss_pred             CCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcc
Confidence            78899999999999999999999999999999999999999999999999999999999999988889999999999999


Q ss_pred             ccchHHHHHHHHHHHHHHHhcCCCCCCC-----CCCCCccccccCCCCCcc------------------c------CCcc
Q 009010          401 RKEIYAFESHLIDTVAEFLHTSSNDWDT-----GASGGEMIVNHQQSSPQV------------------D------AVVP  451 (546)
Q Consensus       401 ~~~~~~l~~~l~~~L~~fI~~e~~~~~~-----~~s~~~~~~~~~~~~~~~------------------~------~~~~  451 (546)
                      .+.+++||++|+++|++|||+|+.+.+.     .++|++++.++.++...+                  +      .+.+
T Consensus       604 ~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  683 (785)
T PLN00148        604 QRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSSSLLMVSEQELADIDDSIQSSKSLTLQSLQ  683 (785)
T ss_pred             cccchHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9889999999999999999998854211     111333333322211000                  0      0001


Q ss_pred             ccccCCCCC-ccccceeccc------CCCchhhHHHHHHHHhcCcEEEEeccEEEecCCCchhHHHHHHHHHHHHHHhcc
Q 009010          452 RVENGNGGG-AMQKKVRFRG------VGCNNRELEELEEARESGLAYMMGNTCVLASETSSYLKKFVINIVYGFLRRNCR  524 (546)
Q Consensus       452 ~~~~~~~~~-~~~~~~~~~~------~~~~~~el~~l~~a~~~~vsy~lGr~~l~a~~~s~~~kki~i~~lF~fL~rN~r  524 (546)
                      +..|.++++ .++++.+++.      +++++||+++|++|+|+|++|++||+++++|++|+|.||+.+|++|.|||||||
T Consensus       684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR  763 (785)
T PLN00148        684 SAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCR  763 (785)
T ss_pred             ccccccccccccccceeecccccccccchHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhcc
Confidence            111111111 1123344432      235899999999999999999999999999999999999999999999999999


Q ss_pred             CccccccCCCCCEEEEeeEEEC
Q 009010          525 RPATALGVPNASLIEVGMVYRV  546 (546)
Q Consensus       525 ~~~~~~~iP~~rvvevG~~y~i  546 (546)
                      ++...++|||+|++||||+|||
T Consensus       764 ~~~~~L~IPh~~LleVGM~Y~V  785 (785)
T PLN00148        764 GPAVALNIPHISLIEVGMIYYV  785 (785)
T ss_pred             CcccccCCChHHeEEcceEEEC
Confidence            9999999999999999999997

>PLN00150 potassium ion transporter family protein; Provisional	Back alignment and domain information

>PLN00149 potassium transporter; Provisional	Back alignment and domain information

>PLN00151 potassium transporter; Provisional	Back alignment and domain information

>TIGR00794 kup potassium uptake protein	Back alignment and domain information

>PRK10745 trkD potassium transport protein Kup; Provisional	Back alignment and domain information

>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members	Back alignment and domain information

>TIGR00911 2A0308 L-type amino acid transporter	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		546
3gia_A		444	Uncharacterized protein MJ0609; membrane protein,	95.1
4djk_A		511	Probable glutamate/gamma-aminobutyrate antiporter;	93.62
3l1l_A		445	Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC	90.27

>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C	Back alignment and structure

Probab=95.10  E-value=0.058  Score=55.76  Aligned_cols=71  Identities=8%  Similarity=0.076  Sum_probs=35.8

Q ss_pred             hhhhchhhHHHHHHHcCCCCceeEEecCCccCCcccchhhHHHHHHHhhh-eeEEecCchhHHhhhhhhhhhHHHHHHHH
Q 009010          155 AIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLG-VVVGFRDTDMIANAYGLAVITVMFVTTCL  233 (546)
Q Consensus       155 A~Isg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNwlL~~~~l~-vvl~F~~S~~l~~AYGiAVt~~M~iTT~L  233 (546)
                      +.+.+.--+.....+-|.+|+.    -++..++.   |. |-++..+++. +...+-+-+.+.+.++++...+..++.+-
T Consensus       290 ~~~~~~sR~l~a~a~dg~lP~~----f~~~~~~~---P~-~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  361 (444)
T 3gia_A          290 ATIYGGANVAYSLAKDGELPEF----FERKVWFK---ST-EGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILS  361 (444)
T ss_dssp             HHHTTTHHHHHHHHHHSSCCSS----CCTTSCCS---CT-HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCHH----HhCCCCCC---Cc-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344444455566678999963    12222222   55 3333333222 22223466777777777766665554433

PyMOL of 3gia

>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A	Back alignment and structure

>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00