Citrus Sinensis ID: 009031

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540------
Protein Sequence
MPGVGVNCRSSSPSCPSPPQPSSLSVYENGFWENALLLNVSPGLSSLSNPIVRLERTLPHQPSLCSHSEEATSFQSIKSIPSHGSTAPKSSAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHLHTLSSISGTHLEYKSGSPTPIVPNKPVNRLEPQVWKGGFFHYDQALPAHDLSISDNYNSAASVKGDCARDNKFGGSAHRSLADHLGASRIDNNLNTSDRLSEDIVRCISSIYCKLANTPSSHAGLSNSPTSSLSSSSLVSSKNPCDSWSPHCSEDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVIHGDIAEGR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccccEEEEccEEEcHHHHHHHHHcccccccHHHHHHHHccccccccccccccccccccccccHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHccccccccEEEccHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHcccccccEEEEEccccccEEEcccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccHHcccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEHccccHHHHHHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHEEEccccEEcHHHHHHHHHcccccccccHHHHcccccccccccHHHHHccccccccEEEEEEEccccccccEEEEcHHHHHHHHHHHHHHHHHHcccEccccEEEHHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHcccccEEEEEcccccEEEEEcHHHHccc
Coil and Loop (DISEMBL)
mpgvgvncrssspscpsppqpsslsvyengFWENALLLNvspglsslsnpivrlertlphqpslcshseeatsfqsiksipshgstapksSAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHLHTLSsisgthleyksgsptpivpnkpvnrlepqvwkggffhydqalpahdlsisdnynsaasvkgdcardnkfggsaHRSLADhlgasridnnlntsdrlSEDIVRCISSIYCklantpsshaglsnsptsslsssslvssknpcdswsphcsedvsvdyqglkeekgqHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLekidprkmKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAYVIQSsilgirphfsapwlqalfspgrklktgstkhvyaleypeplvhfalcsgaysdpgvrvytAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKGkhdkfinwlpqsskfryvihgdiaegr
Flexible Loop (DISEMBL)
mpgvgvncrssspscpsppqpSSLSVYENGFWENALLLNVSPGLSSLSNPIVRLERTLPHQPSLCSHSEEATSFQSIKSIPSHGSTAPKSSAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHLHTLSSISGTHLEYKSGsptpivpnkpvNRLEPQVWKGGFFHYDQALPAHDLSISDNYNSAASVKGDCARDNKFGGSAHRSLAdhlgasridnnlntsdrlSEDIVRCISSIYCKLANTPSSHAGLSNSPTSSLSSSSLVSSKNPCDSWSPHCSEDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLvrnlekidprkmKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASvyihkeskiFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKGKHdkfinwlpqsskfryvIHGDIAEGR
Low Complexity Region (SEG)
MPGVGVNCRssspscpsppqpsslsVYENGFWENALLLNVSPGLSSLSNPIVRLERTLPHQPSLCSHSEEATSFQSIKSIPSHGSTAPKSSAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHLHTLSSISGTHLEYKSGSPTPIVPNKPVNRLEPQVWKGGFFHYDQALPAHDLSISDNYNSAASVKGDCARDNKFGGSAHRSLADHLGASRIDNNLNTSDRLSEDIVRCISSIYCKLANTPSSHAGlsnsptsslsssslvssKNPCDSWSPHCSEDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVIHGDIAEGR
Disordered region (IsUnstruct)
*************************VYENGFWENALLLNVSPGLS*****I********************************************KEIAVLEAEIMHLERYLLSLYRTAFEEHLHTLSSISGTHLEY*************VNRLEPQVWKGGFFHYDQALPAHDLSISDNY******************************************LSEDIVRCISSIYCKLA****************************************************QHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVIHGDI****
Disordered Region (DISOPRED)
**********************************************************P**PSLCSHSE***********************ELMKEIAVLEAEIMHLERYLLSLY**********************************************************************************************************RLSEDIVRCISSIYC***********************************************QGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAYVIQSSILGIRPH****W***************TKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAE**************DKFINWLPQSSKFRYVIHGDIA***
Disordered Region (DISEMBL)
***********************LSVYENGFWENALLLNVSPGLSSLSNPIVRLERTLPHQP*************SIKSI**********SAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHLHTLSSISGTHLEYKSGSPTPIVPNKPVNRLEPQVWKGGFFHYDQALPAHDLSISDNYNSAASVKGDCARDNKFGGSAHRSLADHLGASRIDNNLNTSDRLSEDIVRCISSIYCKLANTPS*******************************CSEDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVIHGDIAEGR
Disordered Region (DISPRO)
**********************************ALLLNVSPGLSSLSNPIVRLERTLPHQPSLCSHSEEATSFQSIK*****GSTAPKSSAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHLH***********************************************************************************LGASRIDNNLNTSDRLSEDIVRCISSIYCKLAN************************************EDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVIHGDIA***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPGVGVNCRSSSPSCPSPPQPSSLSVYENGFWENALLLNVSPGLSSLSNPIVRLERTLPHQPSLCSHSEEATSFQSIKSIPSHGSTAPKSxxxxxxxxxxxxxxxxxxxxxLLSLYRTAFEEHLHTLSSISGTHLEYKSGSPTPIVPNKPVNRLEPQVWKGGFFHYDQALPAHDLSISDNYNSAASVKGDCARDNKFGGSAHRSLADHLGASRIDNNLNTSDRLSEDIVRCISSIYCKLANTPSSHAGLSNSPTSSLSSSSLVSSKNPCDSWSPHCSEDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVIHGDIAEGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	546
255539376	542	electron transporter, putative [Ricinus	0.989	0.996	0.597	1e-176
359491933	522	PREDICTED: uncharacterized protein LOC10	0.908	0.950	0.624	1e-167
297745629	469	unnamed protein product [Vitis vinifera]	0.833	0.970	0.582	1e-158
224065619	445	predicted protein [Populus trichocarpa]	0.804	0.986	0.639	1e-157
18411161	527	uncharacterized protein [Arabidopsis tha	0.804	0.833	0.478	1e-111
297839539	526	hypothetical protein ARALYDRAFT_476820 [	0.868	0.901	0.457	1e-110
18394945	505	uncharacterized protein [Arabidopsis tha	0.794	0.859	0.498	1e-109
334182732	493	uncharacterized protein [Arabidopsis tha	0.794	0.880	0.498	1e-109
8886996	504	Contains similarity to an unknown protei	0.794	0.861	0.498	1e-109
297845086	505	hypothetical protein ARALYDRAFT_472343 [	0.851	0.920	0.467	1e-107

>gi|255539376|ref|XP_002510753.1| electron transporter, putative [Ricinus communis] gi|223551454|gb|EEF52940.1| electron transporter, putative [Ricinus communis]

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 324/542 (59%), Positives = 404/542 (74%), Gaps = 2/542 (0%)

Query: 5   GVNCRSSSPSCPSPPQPSSLSVYENGFWENALLLNVSPGLSSLSNPIVRLERTLPHQPSL 64
           G NC S   SC   P  SS S+ +    +N  +LN+SP LS+  N I++ E +L  + S+
Sbjct: 3   GANCPSPYSSCSPFPYMSSPSIPDGEMLDN--VLNISPKLSAHPNSILKSENSLSCEASV 60

Query: 65  CSHSEEATSFQSIKSIPSHGSTAPKSSAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHL 124
             +SE   +F S+  IP +G+  PKSS  L KEIA LE+EI+HLERYLLSLYR AFEE +
Sbjct: 61  NWNSETKAAFTSLICIPYNGTPTPKSSDVLRKEIATLESEILHLERYLLSLYRNAFEERV 120

Query: 125 HTLSSISGTHLEYKSGSPTPIVPNKPVNRLEPQVWKGGFFHYDQALPAHDLSISDNYNSA 184
             LS+   +  +YK GSP+ +V N+  + L+P + + GF ++ Q  PAH  + SD+    
Sbjct: 121 PPLSNAPKSPWQYKKGSPSNLVVNQSHHNLKPHMERDGFIYHYQTSPAHGWASSDDQTCT 180

Query: 185 ASVKGDCARDNKFGGSAHRSLADHLGASRIDNNLNTSDRLSEDIVRCISSIYCKLANTPS 244
           AS+     R  K   S  RSLADHLGAS +  +LNT D LSEDI++CISSIYCKLAN   
Sbjct: 181 ASLHSTSKRGQKNANSGRRSLADHLGASCLIKSLNTPDTLSEDILKCISSIYCKLANPNL 240

Query: 245 SHAGLSNSPTSSLSSSSLVSSKNPCDSWSPHCSEDVSVDYQGLKEEKGQHATMVEVLKIY 304
           +H GL +SP SSLSSSS+ SS+NPCD+WSP  SED    +Q LKEE   +A MVEV K+ 
Sbjct: 241 AHGGLPSSPPSSLSSSSVFSSQNPCDNWSPQYSEDAISHHQVLKEESRPYAAMVEVKKMC 300

Query: 305 LDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNS 364
           LDDDSF+YA  +L++FRSLVR+LE +DPRKMKREEKL FWINIHNALVMHAYLAYGTRN 
Sbjct: 301 LDDDSFNYAATLLKHFRSLVRSLENVDPRKMKREEKLTFWINIHNALVMHAYLAYGTRNR 360

Query: 365 VKSTSIMKAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYAL 424
           VK  SI+KAAYN+GG  ++A  IQ+SI GIR H+S PWLQ LFSPG K KTGS +HVYAL
Sbjct: 361 VKGASILKAAYNIGGHCINASAIQNSIFGIRSHYSEPWLQTLFSPGWKSKTGSVRHVYAL 420

Query: 425 EYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIY 484
           EYPEPLVHFALC+GAYSDP VRVYTA+N+F++LK AKEEFI+AS+YIHKE KIFLPKI+ 
Sbjct: 421 EYPEPLVHFALCTGAYSDPAVRVYTAQNIFQELKAAKEEFIKASIYIHKEGKIFLPKILS 480

Query: 485 YFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVIHGDIAE 544
           YFAKDMS+D+ GLLE I+GC+ E QQKAMR+C++ K +K+I+WLP+SS FRYVIHGD+ +
Sbjct: 481 YFAKDMSMDMYGLLEAISGCLTEVQQKAMRRCMRRKVNKYIHWLPRSSTFRYVIHGDLVK 540

Query: 545 GR 546
           GR
Sbjct: 541 GR 542

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491933|ref|XP_002273980.2| PREDICTED: uncharacterized protein LOC100264995 [Vitis vinifera]

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 312/500 (62%), Positives = 383/500 (76%), Gaps = 4/500 (0%)

Query: 49  NPIVRLERTLPHQPSLCSHSEEATSFQSIKSIPSHGSTAPKSSAELMKEIAVLEAEIMHL 108
           N I +LERTL  Q SLC  S++A S  S  SIPS+G+  PKS A+L+ EIA LE EIMHL
Sbjct: 22  NRIGQLERTLSLQSSLCWDSKKAPSSLSNASIPSNGAPTPKSPAQLIDEIATLEVEIMHL 81

Query: 109 ERYLLSLYRTAFEEHLHTLSSISGTHLEYKSGSPTPIVPNKPVNRLEPQVWKGGFFHYDQ 168
           ERYLLSLYR+AFE+HL T    S  HL++K+GSP  ++ ++P  ++EP++W+GG  H   
Sbjct: 82  ERYLLSLYRSAFEQHLPTFPGNS-EHLQHKAGSPLQVLQSQPSYKIEPEMWRGGVVHSGT 140

Query: 169 ALPAHDLSISDNYNSAASVKGDCARDNKFGGSAHRSLADHLGASRIDNNLNTSDRLSEDI 228
           +   H  + SD++N AA+ K    RD K G   H SL ++ GAS ID+ L+T D+LSEDI
Sbjct: 141 S-STHGWADSDDWNYAATSKVKSRRDGKNGDLGHHSLGEYFGASHIDHTLHTPDKLSEDI 199

Query: 229 VRCISSIYCKLANTPSSHAGLSNSPTSSLSSSSLVSSKNPCDSWSPHCSEDVSVD--YQG 286
           V+CISSIYCKLAN  SS AG S S TSSLSS+S  S +N  D+WSPHC+E  +    +QG
Sbjct: 200 VQCISSIYCKLANPHSSSAGFSVSSTSSLSSTSTFSVQNLFDTWSPHCNEGATGHHRFQG 259

Query: 287 LKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWIN 346
           LKEE   +A MVEV+K+ LDDDSF+YA  MLQNFRSLV+NL K++PRKMKRE KLAFWIN
Sbjct: 260 LKEENAPYAAMVEVMKLCLDDDSFNYAASMLQNFRSLVQNLAKVNPRKMKREGKLAFWIN 319

Query: 347 IHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQAL 406
           IHNALVMHAYLAYG RN VK TSI+KAAYNVGG  V+AY IQSSILGIR H  APWLQ L
Sbjct: 320 IHNALVMHAYLAYGIRNCVKGTSILKAAYNVGGHCVNAYDIQSSILGIRSHRPAPWLQTL 379

Query: 407 FSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQ 466
            SPG K + G++KH+YA+EYPEPLVHFALCSG YSDP VR+YTA+NVF++LKLAK+EFI+
Sbjct: 380 LSPGNKSRMGNSKHIYAIEYPEPLVHFALCSGTYSDPVVRLYTAQNVFQNLKLAKQEFIE 439

Query: 467 ASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKGKHDKFIN 526
           AS Y+ K +KIFLPKI+ YFAKD SL +  LLE++TGCV+EAQ K M +C+KG+  K I+
Sbjct: 440 ASAYVDKGTKIFLPKILSYFAKDTSLSMHKLLEVVTGCVSEAQHKEMERCMKGRPHKCIH 499

Query: 527 WLPQSSKFRYVIHGDIAEGR 546
           WLPQSS FRYVIHG++A  R
Sbjct: 500 WLPQSSTFRYVIHGELANAR 519

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745629|emb|CBI40794.3| unnamed protein product [Vitis vinifera]

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 289/496 (58%), Positives = 354/496 (71%), Gaps = 41/496 (8%)

Query: 51  IVRLERTLPHQPSLCSHSEEATSFQSIKSIPSHGSTAPKSSAELMKEIAVLEAEIMHLER 110
           I +LERTL  Q SLC  S++A S  S  SIPS+G+  PKS A+L+ EIA LE EIMHLER
Sbjct: 12  IGQLERTLSLQSSLCWDSKKAPSSLSNASIPSNGAPTPKSPAQLIDEIATLEVEIMHLER 71

Query: 111 YLLSLYRTAFEEHLHTLSSISGTHLEYKSGSPTPIVPNKPVNRLEPQVWKGGFFHYDQAL 170
           YLLSLYR+AFE+HL T    S  HL++K+GSP  ++ ++P  ++EP++W+GG  H   + 
Sbjct: 72  YLLSLYRSAFEQHLPTFPGNS-EHLQHKAGSPLQVLQSQPSYKIEPEMWRGGVVHSGTS- 129

Query: 171 PAHDLSISDNYNSAASVKGDCARDNKFGGSAHRSLADHLGASRIDNNLNTSDRLSEDIVR 230
             H  + SD++N AA+ K    RD K G   H SL ++ GAS ID+ L+T D+LSEDIV+
Sbjct: 130 STHGWADSDDWNYAATSKVKSRRDGKNGDLGHHSLGEYFGASHIDHTLHTPDKLSEDIVQ 189

Query: 231 CISSIYCKLANTPSSHAGLSNSPTSSLSSSSLVSSKNPCDSWSPHCSEDVSVDYQGLKEE 290
           CISSIYCKLAN  SS AG S                                       E
Sbjct: 190 CISSIYCKLANPHSSSAGFS---------------------------------------E 210

Query: 291 KGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWINIHNA 350
              +A MVEV+K+ LDDDSF+YA  MLQNFRSLV+NL K++PRKMKRE KLAFWINIHNA
Sbjct: 211 NAPYAAMVEVMKLCLDDDSFNYAASMLQNFRSLVQNLAKVNPRKMKREGKLAFWINIHNA 270

Query: 351 LVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQALFSPG 410
           LVMHAYLAYG RN VK TSI+KAAYNVGG  V+AY IQSSILGIR H  APWLQ L SPG
Sbjct: 271 LVMHAYLAYGIRNCVKGTSILKAAYNVGGHCVNAYDIQSSILGIRSHRPAPWLQTLLSPG 330

Query: 411 RKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASVY 470
            K + G++KH+YA+EYPEPLVHFALCSG YSDP VR+YTA+NVF++LKLAK+EFI+AS Y
Sbjct: 331 NKSRMGNSKHIYAIEYPEPLVHFALCSGTYSDPVVRLYTAQNVFQNLKLAKQEFIEASAY 390

Query: 471 IHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKGKHDKFINWLPQ 530
           + K +KIFLPKI+ YFAKD SL +  LLE++TGCV+EAQ K M +C+KG+  K I+WLPQ
Sbjct: 391 VDKGTKIFLPKILSYFAKDTSLSMHKLLEVVTGCVSEAQHKEMERCMKGRPHKCIHWLPQ 450

Query: 531 SSKFRYVIHGDIAEGR 546
           SS FRYVIHG++A  R
Sbjct: 451 SSTFRYVIHGELANAR 466

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065619|ref|XP_002301887.1| predicted protein [Populus trichocarpa] gi|222843613|gb|EEE81160.1| predicted protein [Populus trichocarpa]

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 295/461 (63%), Positives = 351/461 (76%), Gaps = 22/461 (4%)

Query: 89  KSSAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHLHTLSSISGTHLEYKSGSPTPIVPN 148
           +SSA L KEIA LEAEI+HLERYLLSLYRTAF E L  LS+++  HL+YK+GSP  +   
Sbjct: 1   QSSAVLRKEIATLEAEILHLERYLLSLYRTAFNEQLPALSNVTKNHLQYKTGSPLQV--Q 58

Query: 149 KPVNRLEPQVWKGGFFHYDQALPAHDLSISDNYNSAASVKGDCARDNKFGGSAHRSLADH 208
            P N                 L  H  +   + +  AS++    R+ K   S   SLADH
Sbjct: 59  SPHN-----------------LKVHQQTGPYSQSCTASLQSTSTREQKNVDSGRHSLADH 101

Query: 209 LGASRIDNNLNTSDRLSEDIVRCISSIYCKLANTPSSHAGLSNSPTSSLSSSSLVSSKNP 268
           L AS + N+L   DRLSEDIVRCISSIYC+L N   S  GL+ SPTSSLSSSS+ SS+NP
Sbjct: 102 LRASCLVNDLGIPDRLSEDIVRCISSIYCRLCNPLHSQLGLAASPTSSLSSSSIFSSRNP 161

Query: 269 CDSWSPHCSEDVSVD--YQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFR-SLVR 325
            D+WSPHC+ D       QGLK E G + TM+EVL IYLDD SF+YA  ML+NFR SLV+
Sbjct: 162 SDNWSPHCNGDAMFQRQLQGLKGESGPYDTMLEVLNIYLDDASFNYAATMLKNFRWSLVQ 221

Query: 326 NLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAY 385
            LEK+DPRK+KREEKLAFWINIHNALVMHAYLAYGT N VKS SI+KAAYNVGGQ ++A 
Sbjct: 222 RLEKVDPRKLKREEKLAFWINIHNALVMHAYLAYGTHNRVKSASILKAAYNVGGQCINAC 281

Query: 386 VIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGV 445
           VIQSSILGIR H+S PWLQALFSPGRK KTG+ +HVYALEYPEPLVHFALCSGAYSDP V
Sbjct: 282 VIQSSILGIRSHYSEPWLQALFSPGRKSKTGNIRHVYALEYPEPLVHFALCSGAYSDPAV 341

Query: 446 RVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCV 505
           RVYTAK++F++LK+AKEEFIQ+ VY+HKESKIFLPKI++YF KDMS+D  G++E+I+ C+
Sbjct: 342 RVYTAKSIFQELKVAKEEFIQSKVYVHKESKIFLPKILWYFGKDMSIDADGVIEVISECL 401

Query: 506 AEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVIHGDIAEGR 546
            E Q KAMRKC +GK +K I+WL QSS FRYVIHG++A+GR
Sbjct: 402 TEGQLKAMRKCTRGKANKSIHWLSQSSSFRYVIHGELAKGR 442

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18411161|ref|NP_565137.1| uncharacterized protein [Arabidopsis thaliana] gi|16974598|gb|AAL31203.1| At1g76620/F14G6_22 [Arabidopsis thaliana] gi|23506175|gb|AAN31099.1| At1g76620/F14G6_22 [Arabidopsis thaliana] gi|110742571|dbj|BAE99199.1| hypothetical protein [Arabidopsis thaliana] gi|332197744|gb|AEE35865.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 224/468 (47%), Positives = 304/468 (64%), Gaps = 29/468 (6%)

Query: 88  PKSSAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHL-HTLSSISGTHLEYKSGSPTPIV 146
           PKSS EL KEIA +E EI+H+ERYLLSLYR +FE+ L ++ S++S T    +S + +P  
Sbjct: 77  PKSSEELKKEIASIEIEILHMERYLLSLYRKSFEQQLPNSFSNLSVTTTLPRSVTTSPT- 135

Query: 147 PNKPVNRLEPQVWKGGFFHYDQALPAHDLSISDNYNSAASVKGDCARDNKFGGSAHRSLA 206
                             HY     A+   IS   +   S+K   +R+     S   SL 
Sbjct: 136 ---------------SLTHYQ----AYQKPISYPRSFNTSLKALSSREGTRVVSGTHSLG 176

Query: 207 DHLGASRI--DNNLNTSDRLSEDIVRCISSIYCKLAN--TPSSHAGLSNSPTSSLSSSSL 262
           + LG+S I   NN    ++LSEDI+RCISS+YC L+   T ++      SP SS +S+  
Sbjct: 177 ELLGSSHIVDHNNFINPNKLSEDIMRCISSVYCTLSRGSTSTTSTCFPASPVSSNASTIF 236

Query: 263 VSSKNPCDSWSPH-CSEDVSVDY-QGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNF 320
            S  N  D WS +  SED  +++ Q           ++E L+++LDD SF YA  MLQNF
Sbjct: 237 SSKFNYEDKWSLNGASEDHFLNHCQDQDNVLPCGVVVIEALRVHLDDGSFGYAALMLQNF 296

Query: 321 RSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQ 380
           RSLV+NLEK+DP +MKREEKLAFWINIHNALVMHAYLAYGT N  ++TS++KAAY++GG 
Sbjct: 297 RSLVQNLEKVDPSRMKREEKLAFWINIHNALVMHAYLAYGTHNRARNTSVLKAAYDIGGY 356

Query: 381 YVDAYVIQSSILGIRPHFSAP--WLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSG 438
            ++ Y+IQSSILGIRPH+++P   LQ LFSP RK KT S +H+YALEYPE L HFA+ SG
Sbjct: 357 RINPYIIQSSILGIRPHYTSPSPLLQTLFSPSRKSKTCSVRHIYALEYPEALAHFAISSG 416

Query: 439 AYSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLL 498
           A++DP VRVYTA  +FRDL+ AK+E+I+++V ++K +KI LPKI  ++ KDMS+D+  L+
Sbjct: 417 AFTDPTVRVYTADRIFRDLRQAKQEYIRSNVRVYKGTKILLPKIFQHYVKDMSMDVSKLM 476

Query: 499 ELITGCVAEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVIHGDIAEGR 546
           E  + C+ E  +K   KC+K K  K   WLP++  FRYVI G++   R
Sbjct: 477 EATSQCLPEDARKIAEKCLKEKKSKNFEWLPENLSFRYVIAGELVGAR 524

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839539|ref|XP_002887651.1| hypothetical protein ARALYDRAFT_476820 [Arabidopsis lyrata subsp. lyrata] gi|297333492|gb|EFH63910.1| hypothetical protein ARALYDRAFT_476820 [Arabidopsis lyrata subsp. lyrata]

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 245/535 (45%), Positives = 335/535 (62%), Gaps = 61/535 (11%)

Query: 33  ENALL---LNVSPG-LSSLSNPIVRLERTL-PHQ-PSLCSHSEEATSFQSIKSIPSHGST 86
           EN +L   ++VSP   SS    I+ +E+TL  HQ  SLC                     
Sbjct: 29  ENMVLQSVVDVSPSSFSSDRKSILPIEKTLITHQNSSLC--------------------L 68

Query: 87  APKSSAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHL-HTLSSISGTHLEYKSGSPTPI 145
            PKSS EL KEIA +E EI+H+ERYLLSLYR +FE+ L ++ S +S T   +     T  
Sbjct: 69  IPKSSEELKKEIASIEIEILHMERYLLSLYRKSFEQQLPNSYSKLSATTTNFPRSVTTS- 127

Query: 146 VPNKPVNRLEPQVWKGGFFHYDQALPAHDLSISDNYNSAASVKGDCARDNKFGGSAHRSL 205
                         +    H+ QA     +S   ++N+  S+K   +R+     S + SL
Sbjct: 128 --------------RTSLTHHYQAY-QKPISYPRSFNT--SLKALSSREGTRVVSGNHSL 170

Query: 206 ADHLGASRI--DNNLNTSDRLSEDIVRCISSIYCKLA--NTPSSHAGLSNSPTSSLS-SS 260
            + LG+S I   +NL   ++LSEDI+RCISS+YC L+  +T ++      SP SSLS +S
Sbjct: 171 GELLGSSHIVDHSNLINPNKLSEDIMRCISSVYCTLSRGSTSTNSTCFPASPVSSLSNAS 230

Query: 261 SLVSSKNPC--DSWSPHC-SEDVSVDY---QGLKEEKGQHATMVEVLKIYLDDDSFSYAV 314
           ++ SSK+    D WS +C SED  +++   QG     G    ++E L+++LDD SF YA 
Sbjct: 231 TIFSSKSNYYDDKWSLNCASEDHFLNHFQDQGNVLPCG--VVVIEALRVHLDDASFGYAA 288

Query: 315 EMLQNFRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAA 374
            MLQNFRSLV+NLEK+DP +MKREEKLAFWINIHNALVMHAYLAYGT N  ++TS++KAA
Sbjct: 289 LMLQNFRSLVQNLEKVDPSRMKREEKLAFWINIHNALVMHAYLAYGTHNRARNTSVLKAA 348

Query: 375 YNVGGQYVDAYVIQSSILGIRPHF--SAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVH 432
           Y++GG  ++ ++IQSSILGIRPH+   +P LQ LFSP RK K  S +HVYALEYPE L H
Sbjct: 349 YDIGGYRINPFIIQSSILGIRPHYISPSPLLQTLFSPSRKSKACSVRHVYALEYPEALAH 408

Query: 433 FALCSGAYSDPG-VRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMS 491
           FA+ SGA++DP  VRVYTA  +FRDL+ AK+E+I+++V ++K +KI LPKI  ++ KDMS
Sbjct: 409 FAISSGAFTDPMVVRVYTADRIFRDLRQAKQEYIRSNVRVYKGTKILLPKIFQHYVKDMS 468

Query: 492 LDIQGLLELITGCVAEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVIHGDIAEGR 546
           +D+  L+E    C+ E  +K   KC+K K  K   WLP++  FRYVI G++   R
Sbjct: 469 MDVSKLMEATAQCLPEDARKIAEKCLKEKKSKNFEWLPENLSFRYVIAGELVGAR 523

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18394945|ref|NP_564131.1| uncharacterized protein [Arabidopsis thaliana] gi|332191935|gb|AEE30056.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/459 (49%), Positives = 307/459 (66%), Gaps = 25/459 (5%)

Query: 82  SHGSTAPKSSAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHLHTLSSISGTHLEYKSGS 141
           S+ +  PKSS +L KEIA LE EI+  E+YLLSLYRTAF+E + + S     H E     
Sbjct: 56  SNCNVTPKSSEDLRKEIASLEFEILRTEQYLLSLYRTAFDEQVSSFSP----HTE----- 106

Query: 142 PTPIVPNKPVNRLEPQVWKGGFFHYDQALPAHDLS-ISDNYNSAASVKGDCARD-NKFGG 199
            T +V N+ + + E       F ++ QA PA + S +    +  AS+K   AR+ +++  
Sbjct: 107 -TSLVSNQFLPKSEQSDVTSVFSYHYQASPASECSSLCPPRSFQASLKALSAREKSRYVS 165

Query: 200 SAHRSLADHLGASRIDNNLNTSDRLSEDIVRCISSIYCKLANTPSSHAGLSNSPTSSLSS 259
           S+H +L D LG++ I +N+    RLSEDI+RCI S+YC L    SS A +++   +S SS
Sbjct: 166 SSHTTLGDLLGSTLIVDNIANPSRLSEDILRCICSVYCTL----SSKARINSCLQASPSS 221

Query: 260 SSLVSSKNPCDSWSPHCSEDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQN 319
            S VSSK   DS +    E    +  G+         ++E L+++LDD SF++A  MLQN
Sbjct: 222 PSSVSSKATFDSLNSRHEERKEANVPGV--------VVIESLELHLDDGSFNHAAVMLQN 273

Query: 320 FRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGG 379
           FRSLV+ LEK+DP +MKREEKLAFWINIHNAL MHAYLAYGT N  ++TS++KAAY+VGG
Sbjct: 274 FRSLVQKLEKVDPSRMKREEKLAFWINIHNALTMHAYLAYGTHNRARNTSVLKAAYDVGG 333

Query: 380 QYVDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGA 439
             V+ Y+IQSSILGIRPHFS P LQ LFSP RK KT + KH+YALEYPE L HFAL SG 
Sbjct: 334 YSVNPYIIQSSILGIRPHFSQPLLQTLFSPSRKSKTCNVKHIYALEYPEALAHFALSSGF 393

Query: 440 YSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLE 499
            +DP VRVYTA  VFRDL+ +KEEFI+ +V IH E+KI LPKI++Y+AKDMSL+   L+E
Sbjct: 394 STDPPVRVYTADCVFRDLRKSKEEFIRNNVRIHNETKILLPKIVHYYAKDMSLEPSALME 453

Query: 500 LITGCVAEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVI 538
               C+ ++ ++  +K +K K  + I + P++S FRYVI
Sbjct: 454 TTVKCLPDSTKRTAQKLLKKK-SRNIEYSPENSSFRYVI 491

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334182732|ref|NP_001185051.1| uncharacterized protein [Arabidopsis thaliana] gi|332191936|gb|AEE30057.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/459 (49%), Positives = 307/459 (66%), Gaps = 25/459 (5%)

Query: 82  SHGSTAPKSSAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHLHTLSSISGTHLEYKSGS 141
           S+ +  PKSS +L KEIA LE EI+  E+YLLSLYRTAF+E + + S     H E     
Sbjct: 44  SNCNVTPKSSEDLRKEIASLEFEILRTEQYLLSLYRTAFDEQVSSFSP----HTE----- 94

Query: 142 PTPIVPNKPVNRLEPQVWKGGFFHYDQALPAHDLS-ISDNYNSAASVKGDCARD-NKFGG 199
            T +V N+ + + E       F ++ QA PA + S +    +  AS+K   AR+ +++  
Sbjct: 95  -TSLVSNQFLPKSEQSDVTSVFSYHYQASPASECSSLCPPRSFQASLKALSAREKSRYVS 153

Query: 200 SAHRSLADHLGASRIDNNLNTSDRLSEDIVRCISSIYCKLANTPSSHAGLSNSPTSSLSS 259
           S+H +L D LG++ I +N+    RLSEDI+RCI S+YC L    SS A +++   +S SS
Sbjct: 154 SSHTTLGDLLGSTLIVDNIANPSRLSEDILRCICSVYCTL----SSKARINSCLQASPSS 209

Query: 260 SSLVSSKNPCDSWSPHCSEDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQN 319
            S VSSK   DS +    E    +  G+         ++E L+++LDD SF++A  MLQN
Sbjct: 210 PSSVSSKATFDSLNSRHEERKEANVPGV--------VVIESLELHLDDGSFNHAAVMLQN 261

Query: 320 FRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGG 379
           FRSLV+ LEK+DP +MKREEKLAFWINIHNAL MHAYLAYGT N  ++TS++KAAY+VGG
Sbjct: 262 FRSLVQKLEKVDPSRMKREEKLAFWINIHNALTMHAYLAYGTHNRARNTSVLKAAYDVGG 321

Query: 380 QYVDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGA 439
             V+ Y+IQSSILGIRPHFS P LQ LFSP RK KT + KH+YALEYPE L HFAL SG 
Sbjct: 322 YSVNPYIIQSSILGIRPHFSQPLLQTLFSPSRKSKTCNVKHIYALEYPEALAHFALSSGF 381

Query: 440 YSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLE 499
            +DP VRVYTA  VFRDL+ +KEEFI+ +V IH E+KI LPKI++Y+AKDMSL+   L+E
Sbjct: 382 STDPPVRVYTADCVFRDLRKSKEEFIRNNVRIHNETKILLPKIVHYYAKDMSLEPSALME 441

Query: 500 LITGCVAEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVI 538
               C+ ++ ++  +K +K K  + I + P++S FRYVI
Sbjct: 442 TTVKCLPDSTKRTAQKLLKKK-SRNIEYSPENSSFRYVI 479

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8886996|gb|AAF80656.1|AC012190_12 Contains similarity to an unknown protein F14G6.22 gi|6642679 from Arabidopsis thaliana gb|AC015450. ESTs gb|AI994240 and gb|T42814 come from this gene [Arabidopsis thaliana]

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/459 (49%), Positives = 307/459 (66%), Gaps = 25/459 (5%)

Query: 82  SHGSTAPKSSAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHLHTLSSISGTHLEYKSGS 141
           S+ +  PKSS +L KEIA LE EI+  E+YLLSLYRTAF+E + + S     H E     
Sbjct: 55  SNCNVTPKSSEDLRKEIASLEFEILRTEQYLLSLYRTAFDEQVSSFSP----HTE----- 105

Query: 142 PTPIVPNKPVNRLEPQVWKGGFFHYDQALPAHDLS-ISDNYNSAASVKGDCARD-NKFGG 199
            T +V N+ + + E       F ++ QA PA + S +    +  AS+K   AR+ +++  
Sbjct: 106 -TSLVSNQFLPKSEQSDVTSVFSYHYQASPASECSSLCPPRSFQASLKALSAREKSRYVS 164

Query: 200 SAHRSLADHLGASRIDNNLNTSDRLSEDIVRCISSIYCKLANTPSSHAGLSNSPTSSLSS 259
           S+H +L D LG++ I +N+    RLSEDI+RCI S+YC L    SS A +++   +S SS
Sbjct: 165 SSHTTLGDLLGSTLIVDNIANPSRLSEDILRCICSVYCTL----SSKARINSCLQASPSS 220

Query: 260 SSLVSSKNPCDSWSPHCSEDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQN 319
            S VSSK   DS +    E    +  G+         ++E L+++LDD SF++A  MLQN
Sbjct: 221 PSSVSSKATFDSLNSRHEERKEANVPGV--------VVIESLELHLDDGSFNHAAVMLQN 272

Query: 320 FRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGG 379
           FRSLV+ LEK+DP +MKREEKLAFWINIHNAL MHAYLAYGT N  ++TS++KAAY+VGG
Sbjct: 273 FRSLVQKLEKVDPSRMKREEKLAFWINIHNALTMHAYLAYGTHNRARNTSVLKAAYDVGG 332

Query: 380 QYVDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGA 439
             V+ Y+IQSSILGIRPHFS P LQ LFSP RK KT + KH+YALEYPE L HFAL SG 
Sbjct: 333 YSVNPYIIQSSILGIRPHFSQPLLQTLFSPSRKSKTCNVKHIYALEYPEALAHFALSSGF 392

Query: 440 YSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLE 499
            +DP VRVYTA  VFRDL+ +KEEFI+ +V IH E+KI LPKI++Y+AKDMSL+   L+E
Sbjct: 393 STDPPVRVYTADCVFRDLRKSKEEFIRNNVRIHNETKILLPKIVHYYAKDMSLEPSALME 452

Query: 500 LITGCVAEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVI 538
               C+ ++ ++  +K +K K  + I + P++S FRYVI
Sbjct: 453 TTVKCLPDSTKRTAQKLLKKK-SRNIEYSPENSSFRYVI 490

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845086|ref|XP_002890424.1| hypothetical protein ARALYDRAFT_472343 [Arabidopsis lyrata subsp. lyrata] gi|297336266|gb|EFH66683.1| hypothetical protein ARALYDRAFT_472343 [Arabidopsis lyrata subsp. lyrata]

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 240/513 (46%), Positives = 316/513 (61%), Gaps = 48/513 (9%)

Query: 32  WENALLLNVSPGLSSLSN--PIVRLE-RTLPHQPSLCSHSEEATSFQSIKSIPSHGSTAP 88
           WE   ++  SP   S  N  P + +E R L +Q S C+                     P
Sbjct: 22  WEKQNVIVASPSRFSTYNTKPSLSIEKRLLTYQDSNCN-------------------IMP 62

Query: 89  KSSAELMKEIAVLEAEIMHLERYLLSLYRTAFEEHLHTLSSISGTHLEYKSGSPTPIVPN 148
           KSS +L KEIA LE EI+  E+YLLSLYRTAF+E + + S     H E        +V N
Sbjct: 63  KSSEDLRKEIASLEFEILRTEQYLLSLYRTAFDEQVSSFSP----HTE------KSLVSN 112

Query: 149 KPVNRLEPQVWKGGFFHYDQALPAHDLSISDNYNS-AASVKGDCARDNK--FGGSAHRSL 205
           +   + E       F ++ QA PA + S S    S  AS+K   AR+         H +L
Sbjct: 113 QFCPKSEQSDVTSVFSYHYQASPASECSSSCPPRSFQASLKALSAREKSRYVVSGNHTTL 172

Query: 206 ADHLGASRIDNNLNTSDRLSEDIVRCISSIYCKLANTPSSHAGLSNSPTSSLSSSSLVSS 265
            D LG+S I +N+    RLSEDI+RCI S+YC L++T  +++ L     +S SS S VSS
Sbjct: 173 GDLLGSSLIVDNIVNPSRLSEDILRCICSVYCTLSSTARTNSCLQ----ASSSSPSSVSS 228

Query: 266 KNPCDSWSPHCSEDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVR 325
           K   DSW+    E    +  G+         ++E L+++LDD SF++A  MLQNFRSLV+
Sbjct: 229 KTTFDSWNSRHEERKEANVPGV--------VVIESLELHLDDGSFNHAALMLQNFRSLVQ 280

Query: 326 NLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAY 385
            LEK+DP +MKREEKLAFWINIHNAL MHAYLAY T N  ++TS++KAAY+VGG  V+ Y
Sbjct: 281 KLEKVDPSRMKREEKLAFWINIHNALTMHAYLAYRTHNRARNTSVLKAAYDVGGYRVNPY 340

Query: 386 VIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGV 445
            IQSSILGIR HFS P LQ LFSP RK KT + KH+YALEYPE L HFAL SGA +DP V
Sbjct: 341 TIQSSILGIRTHFSPPLLQTLFSPSRKSKTCNVKHIYALEYPEALAHFALSSGASTDPPV 400

Query: 446 RVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCV 505
           RVYTA  VFRDL+ +KEE+I+ +V IH E+KI LPKI++Y+AKDMSLD   ++E    C+
Sbjct: 401 RVYTADCVFRDLRKSKEEYIRYNVRIHNETKILLPKIVHYYAKDMSLDASAVMETTVKCL 460

Query: 506 AEAQQKAMRKCIKGKHDKFINWLPQSSKFRYVI 538
            ++ ++  +K +K K  + I + P++S FRYVI
Sbjct: 461 PDSTKRIAQKLLKKK-SRNIEYSPENSSFRYVI 492

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	546
TAIR|locus:2011661	527	AT1G76620 "AT1G76620" [Arabido	0.862	0.893	0.449	3e-101
TAIR|locus:2199567	505	AT1G21060 "AT1G21060" [Arabido	0.765	0.827	0.470	4e-90
TAIR|locus:2009854	445	AT1G43020 "AT1G43020" [Arabido	0.468	0.575	0.534	1.9e-81
TAIR|locus:2049008	707	AT2G23700 "AT2G23700" [Arabido	0.613	0.473	0.393	1.8e-76
TAIR|locus:2171499	618	AT5G47380 "AT5G47380" [Arabido	0.890	0.786	0.315	8e-53
TAIR|locus:2015666	529	AT1G16750 "AT1G16750" [Arabido	0.446	0.461	0.359	7.6e-44
TAIR|locus:2089220	582	AT3G13000 [Arabidopsis thalian	0.457	0.429	0.362	6.6e-42
TAIR|locus:2165487	540	AT5G42690 [Arabidopsis thalian	0.445	0.45	0.317	1.7e-34
TAIR|locus:2043235	498	AT2G39690 "AT2G39690" [Arabido	0.560	0.614	0.296	5.9e-34
TAIR|locus:2115164	610	AT4G37080 "AT4G37080" [Arabido	0.397	0.355	0.318	2.5e-32

TAIR|locus:2011661 AT1G76620 "AT1G76620" [Arabidopsis thaliana (taxid:3702)]

 Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
 Identities = 228/507 (44%), Positives = 317/507 (62%)

Query:    54 LERTLPHQPSLCSHSEEATSFQSI-KSIPSHGSTA----PKSSAELMKEIAVLEAEIMHL 108
             L+  +   PS  S S +  S   I K++  H +++    PKSS EL KEIA +E EI+H+
Sbjct:    40 LQSVVDASPS--SFSSDRKSILPIEKTLIRHQNSSLCLIPKSSEELKKEIASIEIEILHM 97

Query:   109 ERYLLSLYRTAFEEHL-HTLSSISGTHLEYKSGSPTPIVPNKPVNRLEPQVWKGGFFHYD 167
             ERYLLSLYR +FE+ L ++ S++S T    +S + +P                    HY 
Sbjct:    98 ERYLLSLYRKSFEQQLPNSFSNLSVTTTLPRSVTTSPT----------------SLTHY- 140

Query:   168 QALPAHDLSISDNYNSAASVKGDCARDNKFGGSAHRSLADHLGASRI--DNNLNTSDRLS 225
             QA     +S   ++N+  S+K   +R+     S   SL + LG+S I   NN    ++LS
Sbjct:   141 QAYQK-PISYPRSFNT--SLKALSSREGTRVVSGTHSLGELLGSSHIVDHNNFINPNKLS 197

Query:   226 EDIVRCISSIYCKLA--NTPSSHAGXXXXXXXXXXXXXXXXXKNPCDSWSPH-CSEDVSV 282
             EDI+RCISS+YC L+  +T ++                     N  D WS +  SED  +
Sbjct:   198 EDIMRCISSVYCTLSRGSTSTTSTCFPASPVSSNASTIFSSKFNYEDKWSLNGASEDHFL 257

Query:   283 DY-QGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKL 341
             ++ Q           ++E L+++LDD SF YA  MLQNFRSLV+NLEK+DP +MKREEKL
Sbjct:   258 NHCQDQDNVLPCGVVVIEALRVHLDDGSFGYAALMLQNFRSLVQNLEKVDPSRMKREEKL 317

Query:   342 AFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAYVIQSSILGIRPHFSAP 401
             AFWINIHNALVMHAYLAYGT N  ++TS++KAAY++GG  ++ Y+IQSSILGIRPH+++P
Sbjct:   318 AFWINIHNALVMHAYLAYGTHNRARNTSVLKAAYDIGGYRINPYIIQSSILGIRPHYTSP 377

Query:   402 --WLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKL 459
                LQ LFSP RK KT S +H+YALEYPE L HFA+ SGA++DP VRVYTA  +FRDL+ 
Sbjct:   378 SPLLQTLFSPSRKSKTCSVRHIYALEYPEALAHFAISSGAFTDPTVRVYTADRIFRDLRQ 437

Query:   460 AKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKG 519
             AK+E+I+++V ++K +KI LPKI  ++ KDMS+D+  L+E  + C+ E  +K   KC+K 
Sbjct:   438 AKQEYIRSNVRVYKGTKILLPKIFQHYVKDMSMDVSKLMEATSQCLPEDARKIAEKCLKE 497

Query:   520 KHDKFINWLPQSSKFRYVIHGDIAEGR 546
             K  K   WLP++  FRYVI G++   R
Sbjct:   498 KKSKNFEWLPENLSFRYVIAGELVGAR 524

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2199567 AT1G21060 "AT1G21060" [Arabidopsis thaliana (taxid:3702)]

 Score = 899 (321.5 bits), Expect = 4.0e-90, P = 4.0e-90
 Identities = 209/444 (47%), Positives = 280/444 (63%)

Query:   101 LEAEIMHLERYLLSLYRTAFEEHLHTLSSISGTHLEYKSGSP---TPIVPNKPVNRLEPQ 157
             L  EI  LE  +L   RT  E++L +L   +    +  S SP   T +V N+ + + E  
Sbjct:    68 LRKEIASLEFEIL---RT--EQYLLSLYRTAFDE-QVSSFSPHTETSLVSNQFLPKSEQS 121

Query:   158 VWKGGF-FHYDQALPAHDLS-ISDNYNSAASVKGDCARD-NKFGGSAHRSLADHLGASRI 214
                  F +HY QA PA + S +    +  AS+K   AR+ +++  S+H +L D LG++ I
Sbjct:   122 DVTSVFSYHY-QASPASECSSLCPPRSFQASLKALSAREKSRYVSSSHTTLGDLLGSTLI 180

Query:   215 DNNLNTSDRLSEDIVRCISSIYCKLANTPSSHAGXXXXXXXXXXXXXXXXXKNPCDSWSP 274
              +N+    RLSEDI+RCI S+YC L    SS A                  K   DS + 
Sbjct:   181 VDNIANPSRLSEDILRCICSVYCTL----SSKARINSCLQASPSSPSSVSSKATFDSLNS 236

Query:   275 HCSEDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRK 334
                E    +  G+         ++E L+++LDD SF++A  MLQNFRSLV+ LEK+DP +
Sbjct:   237 RHEERKEANVPGV--------VVIESLELHLDDGSFNHAAVMLQNFRSLVQKLEKVDPSR 288

Query:   335 MKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAYNVGGQYVDAYVIQSSILGI 394
             MKREEKLAFWINIHNAL MHAYLAYGT N  ++TS++KAAY+VGG  V+ Y+IQSSILGI
Sbjct:   289 MKREEKLAFWINIHNALTMHAYLAYGTHNRARNTSVLKAAYDVGGYSVNPYIIQSSILGI 348

Query:   395 RPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVF 454
             RPHFS P LQ LFSP RK KT + KH+YALEYPE L HFAL SG  +DP VRVYTA  VF
Sbjct:   349 RPHFSQPLLQTLFSPSRKSKTCNVKHIYALEYPEALAHFALSSGFSTDPPVRVYTADCVF 408

Query:   455 RDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMR 514
             RDL+ +KEEFI+ +V IH E+KI LPKI++Y+AKDMSL+   L+E    C+ ++ ++  +
Sbjct:   409 RDLRKSKEEFIRNNVRIHNETKILLPKIVHYYAKDMSLEPSALMETTVKCLPDSTKRTAQ 468

Query:   515 KCIKGKHDKFINWLPQSSKFRYVI 538
             K +K K  + I + P++S FRYVI
Sbjct:   469 KLLK-KKSRNIEYSPENSSFRYVI 491

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2009854 AT1G43020 "AT1G43020" [Arabidopsis thaliana (taxid:3702)]

 Score = 709 (254.6 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
 Identities = 138/258 (53%), Positives = 184/258 (71%)

Query:   289 EEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWINIH 348
             EE GQ    V + K+YLDD +      MLQNFRSLV+ LEK+DP ++ REEKLAFWINIH
Sbjct:   185 EEYGQELG-VGIHKLYLDDYNLKSVESMLQNFRSLVQKLEKVDPARLGREEKLAFWINIH 243

Query:   349 NALVMHAYLAYGTRNSVKSTSI-MKAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQALF 407
             NALVMH Y+ YG      ST + +KAA+N+GG++V+AY IQSSILGIRP  S   L+ LF
Sbjct:   244 NALVMHEYIVYGIGEDTTSTLMNLKAAFNIGGEWVNAYDIQSSILGIRPCHSPSRLRTLF 303

Query:   408 SPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQA 467
             SP +  KT S +H YAL+Y EPL+HFAL +GA +DP VRVYT++ +F++L+ A++ +IQ 
Sbjct:   304 SPAKSSKTSSGRHTYALDYAEPLLHFALSTGASTDPMVRVYTSEGIFQELRQARDSYIQT 363

Query:   468 SVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKGKHDKFINW 527
             SV   KE+KI LPKIIY +AKD SLD+  L   ++ C+ E+Q+ AMR+ +  K ++ I W
Sbjct:   364 SVGFEKETKILLPKIIYNYAKDTSLDMGELFSTVSECLMESQRTAMRRIVNKKQERCIRW 423

Query:   528 LPQSSKFRYVIHGDIAEG 545
             +   SKFRYVIH ++  G
Sbjct:   424 VHDESKFRYVIHSELVRG 441

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2049008 AT2G23700 "AT2G23700" [Arabidopsis thaliana (taxid:3702)]

 Score = 630 (226.8 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
 Identities = 135/343 (39%), Positives = 203/343 (59%)

Query:   199 GSAHRSLADHLGASRIDNNLNTSDRLSEDIVRCISSIYCKLANTPSSHAGXXXXXXXXXX 258
             GS   SLA+H+G    D+   T ++LSE++++C S+IY KLA+ PS + G          
Sbjct:   364 GSNDASLAEHMGTRISDHIFMTPNKLSEEMIKCASAIYSKLADPPSINHGFSSPSSSPSS 423

Query:   259 XXXXXXXKNPCDSWSPHCSEDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQ 318
                    ++  D WSP   ++ S D Q   E  G +++M+EV  I+ +       + M +
Sbjct:   424 TSEFSP-QDQYDMWSPSFRKNSSFDDQF--EFSGPYSSMIEVSHIHRNRKRRDLDL-MNR 479

Query:   319 NFRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGT--RNSVKSTSIMKAAYN 376
             NF  L++ LE +DPRK+  +EKLAFWIN+HNALVMH +LA G    N  +   + K AY 
Sbjct:   480 NFSLLLKQLESVDPRKLTHQEKLAFWINVHNALVMHTFLANGIPQNNGKRFLLLSKPAYK 539

Query:   377 VGGQYVDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALC 436
             +GG+ V    IQS IL I+      WL+ L  P +K +TG     Y+LE+ EPL++FALC
Sbjct:   540 IGGRMVSLEAIQSYILRIKMPRPGQWLKLLLIP-KKFRTGDEHQEYSLEHSEPLLYFALC 598

Query:   437 SGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQG 496
             SG +SDP +RV+T K ++++L+ AKEE+I+A+  + K+ K+ LPKII  F+KD  L    
Sbjct:   599 SGNHSDPAIRVFTPKGIYQELETAKEEYIRATFGVKKDQKLVLPKIIESFSKDSGLGQAA 658

Query:   497 LLELITGCVAEAQQKAMRKCIKGKHDK-FINWLPQSSKFRYVI 538
             L+E+I  C+ E  +K ++K   G+  K  + W P +  FRY+I
Sbjct:   659 LMEMIQECLPETMKKTIKKLNSGRSRKSIVEWTPHNFVFRYLI 701

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2171499 AT5G47380 "AT5G47380" [Arabidopsis thaliana (taxid:3702)]

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 167/530 (31%), Positives = 256/530 (48%)

Query:    39 NVSPG-LSSLSNPIVRLERTLPHQPSLCSHSEEATSFQSIKSIPSHGSTAPKSSAELMKE 97
             NVS    +SL   + +L   L  + S+    E A    S    P H   A +++ EL+ E
Sbjct:    83 NVSSNDRASLERDVEQLHLRLQQEKSMRMVLERAMGRASSSLSPGHRHFAGQAN-ELITE 141

Query:    98 IAVLEAEIMHLERYLLSLYRTAFEEHLHTL-----SSISGT--HLEYKSGSPTP-IVPNK 149
             I +LEAE+ + E ++LSLYR+ FE+ +        SSIS    H++       P ++ N 
Sbjct:   142 IELLEAEVTNREHHVLSLYRSIFEQTVSRAPSEQSSSISSPAHHIKQPPRKQDPNVISNA 201

Query:   150 --PVNRLEPQVWKGGFFHYDQALPAH--DLSISDNYNSAASVKGDCARDNKFGGSAHRSL 205
                 N    + W       D +      D S    + +       C+   K       S+
Sbjct:   202 FCSSNNFPLKPWHAMVTLKDSSRKTSKKDQSSQFQFRNCIPSTTSCSSQAK-SHFLKDSV 260

Query:   206 ADHLGASRI--DNNLNTSDRLSEDIVRCISSIYCKLANTPSSHAGXXXXXXXXXXXXXXX 263
                  + R   D+     ++LSED+V+C+SS+Y  L  +  S A                
Sbjct:   261 TVKSPSQRTLKDHLYQCPNKLSEDMVKCMSSVYFWLCCSAMS-ADPEKRILSRSSTSNVI 319

Query:   264 XXKNPCDSWSPHCSEDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSL 323
               KN  +       ED +   +          +MVEV  I  D   FS     + N+R L
Sbjct:   320 IPKNIMN-------EDRAWSCR----------SMVEVSWISSDKKRFSQVTYAINNYRLL 362

Query:   324 VRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGT-RNSVKSTSIM-KAAYNVGGQY 381
             V  LE++   +M+   KLAFWINI+NAL+MHAYLAYG   +S++  ++  K+AYN+GG  
Sbjct:   363 VEQLERVTINQMEGNAKLAFWINIYNALLMHAYLAYGVPAHSLRRLALFHKSAYNIGGHI 422

Query:   382 VDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGS--TKHVYALEYPEPLVHFALCSGA 439
             ++A  I+ SI   +   +  WL+ + S   + K      K +++L+ PEPLV FALC GA
Sbjct:   423 INANTIEYSIFCFQTPRNGRWLETIISTALRKKPAEDKVKSMFSLDKPEPLVCFALCIGA 482

Query:   440 YSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLE 499
              SDP ++ YTA NV  +L  +K EF+ A+V +  + K+ LPKII  F K+ SL    L+ 
Sbjct:   483 LSDPVLKAYTASNVKEELDASKREFLGANVVVKMQKKVLLPKIIERFTKEASLSFDDLMR 542

Query:   500 LITGCVAEAQQKAMRKCIKGKHD-----KFINWLPQSSKFRYVIHGDIAE 544
              +     E   ++++KC++GK +     + + WLP SSKFRYV   D+ E
Sbjct:   543 WLIDNADEKLGESIQKCVQGKPNNKKASQVVEWLPYSSKFRYVFSKDLME 592

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2015666 AT1G16750 "AT1G16750" [Arabidopsis thaliana (taxid:3702)]

 Score = 388 (141.6 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
 Identities = 92/256 (35%), Positives = 143/256 (55%)

Query:   292 GQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWINIHNAL 351
             G + +  EV  + +++    YA + L  FR+LV  L +++P ++   EKLAFWINI+NA+
Sbjct:   273 GSYRSATEVASMSVEEKRLGYASDELWRFRNLVERLARVNPAELSHNEKLAFWINIYNAM 332

Query:   352 VMHAYLAYGT-RNSVKSTSIM-KAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQALFSP 409
             +MHAYLAYG  +  +K  S+M KAAY VGG   +A  I+   L + P    P +  L S 
Sbjct:   333 IMHAYLAYGVPKTDLKLFSLMQKAAYTVGGHSYNAATIEYMTLKMSPPLHRPQIALLLSI 392

Query:   410 GRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASV 469
               KLK    +    +  PEPLV FAL  G +S P VR+Y+A+NV  +L+ A++++IQASV
Sbjct:   393 -LKLKVSDEQRQAGISTPEPLVSFALSCGMHSSPAVRIYSAENVGEELEEAQKDYIQASV 451

Query:   470 YIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIK--------GKH 521
              +    K+ +P++++ FAK  S+D   +   I+  +   Q   + +CI         G  
Sbjct:   452 GVSPRGKLIVPQMLHCFAKK-SVDDCKVALWISRHLPPRQAAFVEQCIHRRQWWGFLGSS 510

Query:   522 DKFINWLPQSSKFRYV 537
                   +P  S+FRY+
Sbjct:   511 SSKCGIVPFDSRFRYL 526

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2089220 AT3G13000 [Arabidopsis thaliana (taxid:3702)]

 Score = 381 (139.2 bits), Expect = 6.6e-42, Sum P(2) = 6.6e-42
 Identities = 94/259 (36%), Positives = 144/259 (55%)

Query:   290 EKGQHATMVEVLKIYLDDDSFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWINIHN 349
             E G ++   EV  + +      YA   L+ FR+LV  L +++P  +   EKLAFWIN++N
Sbjct:   321 EIGNYSLASEVSWMSVGKKQLEYASGALKKFRTLVEQLARVNPIHLSCNEKLAFWINLYN 380

Query:   350 ALVMHAYLAYGT-RNSVKSTSIM-KAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQALF 407
             AL+MHAYLAYG  ++ +K  S+M KAAY VGG    A  ++  IL ++P    P + AL 
Sbjct:   381 ALIMHAYLAYGVPKSDLKLFSLMQKAAYTVGGHSYTAATMEYVILKMKPPMHRPQI-ALL 439

Query:   408 SPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQA 467
                 K+K    +   +++  EPL+ FAL  G YS P VR+Y+AK V  ++  A+ +FIQA
Sbjct:   440 LAIHKMKVSEEQRRASIDTHEPLLGFALSCGMYSSPAVRIYSAKGVKEEMLEAQRDFIQA 499

Query:   468 SVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIKGKHDKFI-- 525
             SV +  + K+ LPK+++ +AK +  D   L   I+  +   Q   + +CI  +    +  
Sbjct:   500 SVGLSSKGKLLLPKMLHCYAKSLVED-SNLGVWISRYLPPHQAAFVEQCISQRRQSLLAS 558

Query:   526 -NW--LPQSSKFRYVIHGD 541
              N   LP  S+FRY+   D
Sbjct:   559 RNCGILPFDSRFRYLFLPD 577

GO:0005634 "nucleus" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2165487 AT5G42690 [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
 Identities = 82/258 (31%), Positives = 144/258 (55%)

Query:   288 KEEKGQHATMVEVLKIYLDDD-SFSYAVEMLQNFRSLVRNLEKIDPRKMKREEKLAFWIN 346
             + + G++    +V +  L+ + + S ++ +++  + L+  L  ++ +K+ ++EKLAFWIN
Sbjct:   287 RRDIGRYKNFSDVEEASLNQNRTSSSSLFLIRQLKRLLGRLSLVNMQKLNQQEKLAFWIN 346

Query:   347 IHNALVMHAYLAYGTRNSVKSTSIM-KAAYNVGGQYVDAYVIQSSILGIRPHFSAPWLQA 405
             I+N+ +M+ +L +G   S    ++M KA  NVGG +++A  I+  IL + PH S      
Sbjct:   347 IYNSCMMNGFLEHGIPESPDMVTLMQKATINVGGHFLNAITIEHFILRL-PHHSK----- 400

Query:   406 LFSP-GRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEF 464
               SP G K    + +  + LE  EPLV FAL  G++S P VRVYTA  V  +L++AK E+
Sbjct:   401 YISPKGSKKNEMAVRSKFGLELSEPLVTFALSCGSWSSPAVRVYTASKVEEELEVAKREY 460

Query:   465 IQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQKAMRKCIK-----G 519
             ++ASV I    KI +PK++ +++ D + DI+ LL+ I   +     K    C++      
Sbjct:   461 LEASVGI-SVVKIGIPKLMDWYSHDFAKDIESLLDWIFLQLPTELGKDALNCVEQGMSQS 519

Query:   520 KHDKFINWLPQSSKFRYV 537
                  ++ +P    FRY+
Sbjct:   520 PSSTLVHIIPYDFTFRYL 537

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2043235 AT2G39690 "AT2G39690" [Arabidopsis thaliana (taxid:3702)]

 Score = 340 (124.7 bits), Expect = 5.9e-34, Sum P(2) = 5.9e-34
 Identities = 98/330 (29%), Positives = 158/330 (47%)

Query:   222 DRLSEDIVRCISSIYCKLANTPSSHAGXXXXXXXXXX----XXXXXXXKNPCDSWSPHCS 277
             + +SE ++ C+  IY +L +  S   G                     +N  +    H  
Sbjct:   178 NEVSEQLINCLIGIYLELNHVSSKTKGDVSLSRRPSSCSRKSNTYSYYQNAMNLDPYHVL 237

Query:   278 EDVSVDYQGLKEEKGQHATMVEVLKIYLDDDSFS-YAVEMLQNFRSLVRNLEKIDPRKMK 336
              D S    G+  + G +   + + +  +D   F+ Y    +     L+  L ++D   + 
Sbjct:   238 PDSS---GGVTRDIGPYKNFIHISRSSIDVTHFTHYCSPAVPRLSVLMEKLSEVDLSFLT 294

Query:   337 REEKLAFWINIHNALVMHAYLAYGTRNSVKS--TSIMKAAYNVGGQYVDAYVIQSSILGI 394
              ++KLAFWINI+NA +MHA+L YG  +S     T + KA+ NVGG  ++A  I+  +L  
Sbjct:   295 YKQKLAFWINIYNACIMHAFLEYGLPSSHNRLLTLMNKASLNVGGIVLNALAIEHFVLR- 353

Query:   395 RPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVRVYTAKNVF 454
               H   P   +L       K    +H Y L Y EP V FALC G++S P +RVYTA  V 
Sbjct:   354 --HPCEPEDDSLDE-----KETLLRHTYGLGYSEPNVTFALCRGSWSSPALRVYTADEVV 406

Query:   455 RDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMSLDIQGLLELITGCVAEAQQ-KAM 513
              DL  A+ E+++ASV +  + KI +P+++ +  KD + DI+ LLE I   +  +   K M
Sbjct:   407 NDLGRARVEYLEASVGVSSKKKIVVPQLLQWHMKDFADDIESLLEWIYSQLPRSGNLKGM 466

Query:   514 -RKCIKGKHD----KFINWLPQSSKFRYVI 538
               +C+K K      K +       +FRY++
Sbjct:   467 IMECLKRKAKVPLAKIVEIQTYGHEFRYLL 496

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2115164 AT4G37080 "AT4G37080" [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
 Identities = 74/232 (31%), Positives = 133/232 (57%)

Query:   316 MLQNFRSLVRNLEKIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKST-SIM-KA 373
             ++   + L+  L  ++   +  ++KLAFWIN +N+ VM+A+L +G   + +   ++M KA
Sbjct:   385 LIHRLKFLLNKLSVVNLDGLSHQQKLAFWINTYNSCVMNAFLEHGIPATPEMVVALMQKA 444

Query:   374 AYNVGGQYVDAYVIQSSILGIRPH--FSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLV 431
                VGG  ++A  I+  IL +  H  F+ P      +   +++  ST   + LE+ EPLV
Sbjct:   445 TIIVGGHSLNAITIEHFILRLPYHLKFTCPKT----ATHEEMRAHST---FGLEWSEPLV 497

Query:   432 HFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKIIYYFAKDMS 491
              FAL  G++S P VRVYTA NV  +L+ AK +++QASV I K +K+ LPK++ ++  D +
Sbjct:   498 TFALACGSWSSPAVRVYTAANVEEELEAAKRDYLQASVGISKNNKLMLPKVLDWYLLDFA 557

Query:   492 LDIQGLLELITGCVAEAQQKAMRKCIKGKHDK----FINWLPQSSKFRYVIH 539
              D++ LL+ +   + +  ++   KC++ K+ +     +  +P    FR ++H
Sbjct:   558 KDLESLLDWVCLQLPDKLREEATKCMERKNKESLMELVQVVPYDFSFRLLLH 609

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	546
pfam04784	112	pfam04784, DUF547, Protein of unknown function, DU	7e-35
pfam14389	88	pfam14389, Lzipper-MIP1, Leucine-zipper of ternary	6e-12

>gnl|CDD|218263 pfam04784, DUF547, Protein of unknown function, DUF547

 Score =  126 bits (319), Expect = 7e-35
 Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 35/142 (24%)

Query: 329 KIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSI---MKAAYNVGGQYVDAY 385
           ++DP  + REE+LAFWIN++NAL +H  L      S++        KA Y VGGQ +   
Sbjct: 1   RVDPESLSREEQLAFWINLYNALTIHLILDNYPVPSIRDIGFGPWNKAFYTVGGQALSLD 60

Query: 386 VIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGV 445
            I+  IL                                 +P+P +HFAL  G+ S P +
Sbjct: 61  DIEHGILRGN------------------------------WPDPRIHFALNCGSISCPPL 90

Query: 446 R--VYTAKNVFRDLKLAKEEFI 465
           R   YTA+N+   L+ A  EFI
Sbjct: 91  RPEAYTAENLDEQLEEAAREFI 112

Family of uncharacterized proteins from C. elegans and A. thaliana. Length = 112

>gnl|CDD|206557 pfam14389, Lzipper-MIP1, Leucine-zipper of ternary complex factor MIP1

 Score = 61.4 bits (150), Expect = 6e-12
 Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 45  SSLSNPIVRLERTLPHQPSLCSHSEEATSFQSIKSIPSHGSTAPKSSAELMKEIAVLEAE 104
           S+L   + +L++ L  +  L    E+A   +S  S+    S+ PK + EL+ EIA+LEAE
Sbjct: 11  SALEQEVAKLQKQLQQEEDLREALEKALG-RSSGSLLPLPSSLPKKAKELLAEIALLEAE 69

Query: 105 IMHLERYLLSLYRTAFEEH 123
           + +LE+ LLSLYR  F+E 
Sbjct: 70  VSNLEQQLLSLYRQLFQER 88

This leucine-zipper is towards the N-terminus of MIP1 proteins. These proteins, here largely from plants, are subunits of the TORC2 (rictor-mTOR) protein complex controlling cell growth and proliferation. The leucine-zipper is likely to be the region that interacts with plant MADS-box factors,. Length = 88

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	546
PF04784	117	DUF547: Protein of unknown function, DUF547; Inter	100.0
PF14389	88	Lzipper-MIP1: Leucine-zipper of ternary complex fa	99.73

>PF04784 DUF547: Protein of unknown function, DUF547; InterPro: IPR006869 This is a conserved region found in uncharacterised proteins from Caenorhabditis elegans and Arabidopsis thaliana (Mouse-ear cress)

Probab=100.00  E-value=8.6e-38  Score=280.54  Aligned_cols=110  Identities=45%  Similarity=0.684  Sum_probs=101.1

Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHHHHHHHHhCCCCCcccc----c-cceeEEEeCCEeecHHHHHhhhhcCCCCCChhhh
Q 009031          329 KIDPRKMKREEKLAFWINIHNALVMHAYLAYGTRNSVKST----S-IMKAAYNVGGQYVDAYVIQSSILGIRPHFSAPWL  403 (546)
Q Consensus       329 ~Vd~~~Ls~eEKLAFWINiYNaLvmHa~L~~GiP~s~k~~----~-~~ka~Y~VGG~~~Sl~dIEh~ILR~~~~~p~~~~  403 (546)
                      +||++.|+++||+|||||+||+|+||++|++|+|.++.++    . |.+..|+|||+.+||+||||+|||++.+      
T Consensus         1 ~v~~~~l~~~e~lAFwIN~yNal~~h~~l~~~~~~s~~~~~~~~~~~~~~~y~Igg~~~SL~dIe~~ILR~~~~------   74 (117)
T PF04784_consen    1 RVDLSSLSREEKLAFWINLYNALVLHAILENGPPKSILDRKLGGSFFSKVRYNIGGQRFSLDDIEHGILRGNRP------   74 (117)
T ss_pred             CcChHHCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHhhcccccccceEEEECCEEecHHHHHHhhccCCCC------
Confidence            5899999999999999999999999999999988555433    4 9999999999999999999999997532      


Q ss_pred             hhhcCCCCCCCCCcccccccCCCCCceeeeeeccCCCCCCCcc--eeccccHHHHHHHHHHHHh
Q 009031          404 QALFSPGRKLKTGSTKHVYALEYPEPLVHFALCSGAYSDPGVR--VYTAKNVFRDLKLAKEEFI  465 (546)
Q Consensus       404 ~~L~~~~~k~k~~d~r~~~~l~~~DPrIhFAL~cGs~SsP~lR--vYta~~v~~qLe~A~~efL  465 (546)
                                           .+.||||||||+||++|||+||  +|||++|++||++|+++||
T Consensus        75 ---------------------~~~DprihFaL~cgs~s~P~lr~~~yt~~~l~~qL~~a~~~fi  117 (117)
T PF04784_consen   75 ---------------------PWPDPRIHFALNCGSKSCPPLRREAYTAENLDEQLEEAAREFI  117 (117)
T ss_pred             ---------------------CCCCCceeeeeecCCCCChhhhhhccCHHHHHHHHHHHHHhhC
Confidence                                 1799999999999999999999  9999999999999999997

>PF14389 Lzipper-MIP1: Leucine-zipper of ternary complex factor MIP1

Probab=99.73  E-value=9.8e-19  Score=150.15  Aligned_cols=82  Identities=32%  Similarity=0.480  Sum_probs=74.2

Q ss_pred             cCCCCcCCcchhHHhhhcCCCCCcccchhhhhhcccCccCC-CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009031           40 VSPGLSSLSNPIVRLERTLPHQPSLCSHSEEATSFQSIKSI-PSHGSTAPKSSAELMKEIAVLEAEIMHLERYLLSLYRT  118 (546)
Q Consensus        40 ~~~~~~~~~~~i~~L~k~L~~q~~~~~~~~l~~~~~~~~~~-~~~~~~~p~~~~eLi~EIA~LE~EV~~lE~~llsLYr~  118 (546)
                      .+.++++|+|+|.+|+++|++|.  +++.+|+.+...+.+. +..+.++|++++|||+|||+||+||++||+||++|||+
T Consensus         6 ~~~~r~~LeqeV~~Lq~~L~~E~--~~r~aLe~al~~~~~~~~~~~~~lp~~~keLL~EIA~lE~eV~~LE~~v~~L~~~   83 (88)
T PF14389_consen    6 LHERRSALEQEVAELQKQLQEEQ--DLRRALEKALGRSSGSLPSSPSSLPKKAKELLEEIALLEAEVAKLEQKVLSLYRQ   83 (88)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhCCCCcccCCccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45678899999999999999988  7888888877776666 68899999999999999999999999999999999999


Q ss_pred             HHHHh
Q 009031          119 AFEEH  123 (546)
Q Consensus       119 ~f~q~  123 (546)
                      +|+||
T Consensus        84 l~~q~   88 (88)
T PF14389_consen   84 LFQQR   88 (88)
T ss_pred             HHhcC
Confidence            99885

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	546
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 8e-06
 Identities = 74/488 (15%), Positives = 141/488 (28%), Gaps = 156/488 (31%)

Query: 90  SSAELMKEIAVLEAEIMHLERYLL--------SLYRTAFEEHLHT-----LSSISGTHLE 136
           S  E+   I + +  +      L          + +   EE L       +S I     E
Sbjct: 47  SKEEI-DHIIMSKDAVSGT-LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI---KTE 101

Query: 137 YKSGSP---------------TPIVPNKPVNRLEPQVWKGGFFHYDQALPAHDLSISDNY 181
            +  S                  +     V+RL+P   K       QAL    L +    
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP-YLK-----LRQAL----LELRPAK 151

Query: 182 NSAASVKGDCARDNKFGGSAHRSLA-----DHLGASRIDNN---LNTSDRLS-EDIVRCI 232
           N    + G         GS    +A      +    ++D     LN  +  S E ++  +
Sbjct: 152 N--VLIDGV-------LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202

Query: 233 SSIYCKLANTPSSHAGLSNSPTSSLSSSS-------LVSSKNPCDS-------WSP---- 274
             +  ++   P+  +   +S    L   S       L+ SK   +         +     
Sbjct: 203 QKLLYQI--DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260

Query: 275 ----HC-----SEDVSV-DYQGLKEEKGQHATMVEVLKIYLDDDS---FSYAVEMLQNFR 321
                C     +    V D+  L      H ++         D+        ++     +
Sbjct: 261 AFNLSCKILLTTRFKQVTDF--LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC--RPQ 316

Query: 322 SLVRNLEKIDPR------KMKREEKLAFWINIHNALVMHAYLAYGTRNSVKSTSIMKAAY 375
            L R +   +PR      +  R+  LA W N            +   N  K T+I++++ 
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDG-LATWDN------------WKHVNCDKLTTIIESSL 363

Query: 376 NVGGQYVDAYVIQSSILGIRPHFSAPWLQALFSPGRKLKTGSTKHVYAL-----EYPEP- 429
           N         V++ +    R  F    L ++F P   +       + +L        +  
Sbjct: 364 N---------VLEPAEY--RKMFDR--L-SVFPPSAHI----PTILLSLIWFDVIKSDVM 405

Query: 430 --LVHFALCSGAYSDPGVRVYTAKNVFRDLKLAKEEFIQASVYIHKESKIFLPKII--YY 485
             +      S     P     +  +++ +LK+  E        +H+        I+  Y 
Sbjct: 406 VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN----EYALHR-------SIVDHYN 454

Query: 486 FAKDMSLD 493
             K    D
Sbjct: 455 IPKTFDSD 462

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	546
3ra3_B	28	P2F; coiled coil domain, fiber, KIH interactions,	86.64

>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}

Probab=86.64  E-value=0.47  Score=30.91  Aligned_cols=21  Identities=52%  Similarity=0.613  Sum_probs=17.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHH
Q 009031           90 SSAELMKEIAVLEAEIMHLER  110 (546)
Q Consensus        90 ~~~eLi~EIA~LE~EV~~lE~  110 (546)
                      ....|-.|||.||-||.-|||
T Consensus         8 knarlkqeiaaleyeiaaleq   28 (28)
T 3ra3_B            8 KNARLKQEIAALEYEIAALEQ   28 (28)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC-
T ss_pred             hhhHHHHHHHHHHHHHHHhcC
Confidence            456788999999999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00