Citrus Sinensis ID: 009107

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540---
Protein Sequence
MDKNVALAVFFLFSISIADVAHATFRYLAAAPPQNNTTSAQVTGENKQDPNQIGPVKKPENVQPSNNSAPLDPKPISKTDLVSPPQNPITGNSKKLNFPRSGSSTGQNQIVPKDVNHKDDGKNSSPLDKGKNPEHVSGTDLLSPPNKGKSPEHVNGMDLLSPSPVKENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDKSNENGKSGGAKGKTNDDKRSETDNGKIGVGKEKTGDKSDETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETDNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASRIGSISANGLTSRSPNRDGWEHDWNE
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHcccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccEEEEEEcccccEEEEEEEccccccccccccccccccccEEEEEEcccccccEEEEcccccEEEEccccccccccEEEccccEEEEEEccHHHHHHHHHHHHHcEEEEEEEcEEcccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHEEHHcHcHcEcccccccccccccccHEEEccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccEEEEEEccccccEEEEEEcccccccccccEEEcccccEEEEEEEEcccccEEEEEccccEEEEEEcccccccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEccccccccccccEccccccccccccccHHccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MDKNVALAVFFLFSISIADVAHATFRYlaaappqnnttsaqvtgenkqdpnqigpvkkpenvqpsnnsapldpkpisktdlvsppqnpitgnskklnfprsgsstgqnqivpkdvnhkddgknsspldkgknpehvsgtdllsppnkgkspehvngmdllspspvkenvsgtdflspspvkthvngtdnrknggvkekaiddksnengksggakgktnddkrsetdngkigvgkektgdksdetengkngrakekpiadktnvtdneknggvkeksdksnetdngknggakekntddksnemdngknggvkektiddksgsefgvnetcnglhkcEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPtavenplkqlkiSKHQTQKINISLsarknsklvlnagngecvlhmgrpaseekifiylpsydkiltpinGAYFLILSVLIFGVTWACCkcrkrrwndgvpyqelemglpesvsamnvetaegwdegwdddwdennavkspgasrigsisangltsrspnrdgwehdwne
Flexible Loop (DISEMBL)
MDKNVALAVFFLFSISIADVAHATFRYLAAAPPQNNTTSAQVTGENKQDPNQIgpvkkpenvqpsnnsapldpkpiskTDLVSPPQNPITGNSKKLNFPRSGSSTGQNQIVPKDVNHKDDGknsspldkgknpehvsgtdllsppnkGKSPEHVNGMDLLSPSPVKENVSGTdflspspvkthvngtdnrknggvkekaiddksnengksggakgktnddkrsetdngkigvgkektgdksdetengkngrakekpiadktnvtdneknggvkeksdksnetdngknggakekntddksnemdngknggvkektiddksgsefGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINIslsarknsklVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVkspgasrigsisangltsrspnrdgwehdwne
Low Complexity Region (SEG)
MDKNVALAVFFLFSISIADVAHATFRYLAAAPPQNNTTSAQVTGENKQDPNQIGPVKKPENVQPSNNSAPLDPKPISKTDLVSPPQNPITGNSKKLNFPRSGSSTGQNQIVPKDVNHKDDGKNSSPLDKGKNPEHVSGTDLLSPPNKGKSPEHVNGMDLLSPSPVKENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDKSNENGKSGGAKGKTNDDKRSETDNGKIGVGKEKTGDKSDETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETDNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAegwdegwdddwdeNNAVKSPGASRIGSISANGLTSRSPNRDGWEHDWNE
Disordered region (IsUnstruct)
****VALAVFFLFSISIADVAHATFRYLAA****************************************************************************************************************************************************************************************************************************************************************************************************FGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLP**V*AMNVETAEGWDEGWDD****************************************
Disordered Region (DISOPRED)
***NVALAVFFLFSISIADVA*****************************************************************************************************************************************************************************************************************************************************************************************************************************************************G*KTLIVTITI********************************LVLNAGNGECVLHMGRPASE***FIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWN*GVPYQ*******************GWDEGWDDDWDENNA*********************************
Disordered Region (DISEMBL)
MDKNVALAVFFLFSISIADVAHATFRYLAAAPPQN****************QIGPVKK***********PLDPKPISKTDLVSPPQNPITGNSKKLNF********QNQIVPKDVNHKDDGKNSSPLDKGKNPEHVSGTDLLSPPNKGKSPEHVNGMDLLSPSPVKENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDK**********************DNGKIGVGK*****************AKEKPIADKTNVTDNE*********************************EMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASRIGSISANGLTSRSPNRDGWEHDWNE
Disordered Region (DISPRO)
MDKNVALAVFFLFSISIADVAHATFRYLAAAPP**********************************************************************************************************************************************************************************************************************************************************************************************************LHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPE*************DEGWDDDWDENNA*********************************
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDKNVALAVFFLFSISIADVAHATFRYLAAAPPQNNTTSAQVTGENKQDPNQIGPVKKPENVQPSNNSAPLDPKPISKTDLVSPPQNPITGNSKKLNFPRSGSSTGQNQIVPKDVNHKDDGKNSSPLDKGKNPEHVSGTDLLSPPNKGKSPEHVNGMDLLSPSPVKENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDKSNENGKSGGAKGKTNDDKRSETDNGKIGVGKEKTGDKSDETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETDNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASRIGSISANGLTSRSPNRDGWEHDWNE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	543
255575582	329	conserved hypothetical protein [Ricinus	0.473	0.781	0.520	1e-58
356530173	342	PREDICTED: uncharacterized protein LOC10	0.430	0.684	0.528	8e-56
297735540	320	unnamed protein product [Vitis vinifera]	0.465	0.790	0.528	2e-55
15230528	390	uncharacterized protein [Arabidopsis tha	0.408	0.569	0.531	1e-51
357506673	364	hypothetical protein MTR_7g073280 [Medic	0.421	0.629	0.485	6e-51
297819856	390	hypothetical protein ARALYDRAFT_485510 [	0.399	0.556	0.539	5e-50
225439695	309	PREDICTED: uncharacterized protein LOC10	0.445	0.783	0.498	1e-49
118486642	350	unknown [Populus trichocarpa]	0.434	0.674	0.467	4e-48
334185891	410	uncharacterized protein [Arabidopsis tha	0.408	0.541	0.490	9e-48
224139368	157	predicted protein [Populus trichocarpa]	0.283	0.980	0.564	1e-46

>gi|255575582|ref|XP_002528691.1| conserved hypothetical protein [Ricinus communis] gi|223531863|gb|EEF33680.1| conserved hypothetical protein [Ricinus communis]

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/273 (52%), Positives = 180/273 (65%), Gaps = 16/273 (5%)

Query: 279 SNETDNGKNGGAKEKNTDDKSNE-----MDNGKNGGVKEKTIDDKSGSEFGVNETCNGLH 333
           SNET  G    +KE N++  +       ++ G N   + KT D    S+  + + C+G+ 
Sbjct: 65  SNETTTGSKVNSKELNSNTDTTRPPPMLVNEGNNIKNENKTTD----SQLEIGQNCSGML 120

Query: 334 K-CEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQ 392
           + C D  +L+ACI N D    +  ILVQNEGE  L V I+ P   E+      ++KHQT 
Sbjct: 121 RFCRDDASLVACILNSDPEYKKFVILVQNEGESNLKVDISAPNPDES--TSFAMTKHQTS 178

Query: 393 KINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSV 452
           KIN  LS   +++++  AGNGECVLH   P S+  IF  LPSYD+++TPINGAYFLI++V
Sbjct: 179 KIN--LSVGDSNQVIFKAGNGECVLHTDIPVSQGNIFFNLPSYDRLITPINGAYFLIVTV 236

Query: 453 LIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVK 512
           LIFG    CC  RK+R  DG+PYQELEMGLPES  A NVETAEGWD+GWDDDWDE NAVK
Sbjct: 237 LIFGGMSICCLFRKKRQQDGIPYQELEMGLPESSLANNVETAEGWDQGWDDDWDEENAVK 296

Query: 513 SPGASRIGSISANGLTSRSPN--RDGWEHDWNE 543
           SP A   GSIS+NGLTSRSP   RDGWE+DW++
Sbjct: 297 SPAAGHTGSISSNGLTSRSPTSKRDGWENDWDD 329

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530173|ref|XP_003533658.1| PREDICTED: uncharacterized protein LOC100814077 [Glycine max]

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 129/244 (52%), Positives = 171/244 (70%), Gaps = 10/244 (4%)

Query: 303 DNGKNGGVKEKTIDDKSGSEFGVN---ETCNGLHKCEDLKALIACIQNFDTGSGELTILV 359
           D+G + G+ +K  D   G +F  N   ETC+G +KC D   ++ACI   D     L +L+
Sbjct: 106 DDGGDKGL-DKENDKIEGMKFSHNSTTETCDGFNKCTDDGGMVACISKID--PKYLVVLL 162

Query: 360 QNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHM 419
            N G+  +IV +   T  +N L  +++ K +T+K+NI+ S+ K+++L LNAG G+CVLHM
Sbjct: 163 HNGGDGIIIVKLR--TDFDNNLGDVEVHKSKTEKVNITQSSSKSTQLTLNAGKGDCVLHM 220

Query: 420 GRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELE 479
                +E   + LPSYDKILTP+NGAYFLIL VL+FG TWACC CRK+  +D VPYQELE
Sbjct: 221 VSNIPDENFILRLPSYDKILTPVNGAYFLILMVLVFGGTWACCACRKKH-HDEVPYQELE 279

Query: 480 MGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASRIGSISANGLTSRSPNRDGWEH 539
           M LPES  A NVE+AEGWD+ WDDDWD+N AVKSP A+  GSIS NGLTSRS N+DGWE+
Sbjct: 280 MALPESALATNVESAEGWDQDWDDDWDDNVAVKSP-AAHAGSISGNGLTSRSSNKDGWEN 338

Query: 540 DWNE 543
           +W++
Sbjct: 339 NWDD 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735540|emb|CBI18034.3| unnamed protein product [Vitis vinifera]

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/265 (52%), Positives = 180/265 (67%), Gaps = 12/265 (4%)

Query: 283 DNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGL-HKCED-LKA 340
           D GK G  K K+    +       + G +++  DDK+ SE G   TC+GL  KC D  K 
Sbjct: 64  DPGKLGKEKSKDAPVPTTNSSKADSKGKQKEKNDDKASSELGTYGTCDGLLEKCTDPKKK 123

Query: 341 LIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSA 400
           +IACIQ+F+ GS  L  +VQNEGE TL V +T+  +V++ L+ L I KHQT+ +NI  + 
Sbjct: 124 MIACIQSFENGSKAL--IVQNEGENTLKVNLTVSDSVKDALEVLVIPKHQTRSMNILSTG 181

Query: 401 RKNSKLVLNAGNGECVL--HMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVT 458
             +SKLVLNAGN +CV   H+    SE   F +LP + +++TPI G YFL L+ L+ G  
Sbjct: 182 --SSKLVLNAGNKDCVFENHL---ISEGNFFQWLP-HSELVTPIYGVYFLFLTALVVGAM 235

Query: 459 WACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASR 518
           W CCK RKRR   GVPYQELEMGLPES  A+NVETA GWDEGWDDDWDE+ AVKSPG   
Sbjct: 236 WTCCKFRKRRHQGGVPYQELEMGLPESSPAVNVETAAGWDEGWDDDWDEDKAVKSPGGRY 295

Query: 519 IGSISANGLTSRSPNRDGWEHDWNE 543
           +GSIS+NGLT+RS NR+GWE+DW++
Sbjct: 296 VGSISSNGLTTRSSNREGWENDWDD 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15230528|ref|NP_190726.1| uncharacterized protein [Arabidopsis thaliana] gi|6572079|emb|CAB63022.1| putative protein [Arabidopsis thaliana] gi|124301012|gb|ABN04758.1| At3g51580 [Arabidopsis thaliana] gi|332645287|gb|AEE78808.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/235 (53%), Positives = 162/235 (68%), Gaps = 13/235 (5%)

Query: 316 DDKSGSEFGVNETCNG-LHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIP 374
           DDK  SE    +TC G  + C    +L+AC  + D G+    ILVQNEGE +L   I +P
Sbjct: 162 DDKGSSESASVDTCVGKSNICRTENSLVACTLSIDKGAANWLILVQNEGETSLKAKIVLP 221

Query: 375 TAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPS 434
               N L++L + KHQ+QK+NIS+S   N K++L+ G G+C LHM  P+ E  +  + PS
Sbjct: 222 V---NALQELTLPKHQSQKVNISISGDTN-KIILDTGKGQCALHM-YPSEESTLPFHFPS 276

Query: 435 YDKILTPINGAYFLILSVLIFGVTWACCKCRK-RRWNDGVPYQELEM----GLPESVSAM 489
           Y+K++TPINGAYFLI+SV+IFG  WA C CRK RR   GVPY+ELE+    GL       
Sbjct: 277 YEKLVTPINGAYFLIVSVIIFGGIWAFCLCRKNRRAGSGVPYRELELSGGPGLENESGVH 336

Query: 490 NVETAEGWDEGWDDDWDENNAVKSPG-ASRIGSISANGLTSRSPNRDGWEHDWNE 543
           +VETA+  DEGWDDDWDENNAVKSPG A++  SISANGLT+R+PNRDGW+HDW++
Sbjct: 337 DVETADW-DEGWDDDWDENNAVKSPGSAAKSVSISANGLTARAPNRDGWDHDWDD 390

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506673|ref|XP_003623625.1| hypothetical protein MTR_7g073280 [Medicago truncatula] gi|355498640|gb|AES79843.1| hypothetical protein MTR_7g073280 [Medicago truncatula]

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 118/243 (48%), Positives = 161/243 (66%), Gaps = 14/243 (5%)

Query: 303 DNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNE 362
           + GKN G+K         +    N+TC GLH C D   ++ACI   D  S    +L+QN 
Sbjct: 134 EKGKNEGIKL--------AHSTTNDTCEGLHTCRDDGDMVACISKMD--SKNFVVLLQNR 183

Query: 363 GEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMG-- 420
           G  T  + + + + +E+ L  + + K++T+K+ I     ++++L L+AG G+CVLH+   
Sbjct: 184 GGGT--IKVKLRSDLESNLGDIVVDKNKTEKVTIKQIKSESTELTLDAGKGDCVLHVTVV 241

Query: 421 RPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEM 480
            P  E   F+ LPS+DKILTP+NGAYFLI +V++F VTWACC   K++  D +PYQELEM
Sbjct: 242 TPVPEASFFLRLPSFDKILTPVNGAYFLIFTVIVFAVTWACCCIFKKKPRDEIPYQELEM 301

Query: 481 GLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASRIGSISANGLTSRSPNRDGWEHD 540
            LPES SA  VE+AEGWD+GWDDDWD+N AVKSP     GSISANGLTSRS N+DGWE +
Sbjct: 302 ALPESASATVVESAEGWDQGWDDDWDDNVAVKSPVVRHAGSISANGLTSRSSNKDGWEDN 361

Query: 541 WNE 543
           W++
Sbjct: 362 WDD 364

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297819856|ref|XP_002877811.1| hypothetical protein ARALYDRAFT_485510 [Arabidopsis lyrata subsp. lyrata] gi|297323649|gb|EFH54070.1| hypothetical protein ARALYDRAFT_485510 [Arabidopsis lyrata subsp. lyrata]

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/230 (53%), Positives = 159/230 (69%), Gaps = 13/230 (5%)

Query: 321 SEFGVNETCNG-LHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVEN 379
           SE    ETC G  + C    +L+AC  + D GS    ILVQN+GEK+L   I +P    N
Sbjct: 167 SESASVETCIGKSNICRTENSLVACTLSIDKGSANWLILVQNDGEKSLKAKIVLPV---N 223

Query: 380 PLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKIL 439
            L++L + KH +Q+INIS+S   N K++L+ G GEC LHM  P+ E  +  + PSY+K++
Sbjct: 224 SLQELTLPKHHSQRINISISGDTN-KIILDGGKGECALHM-YPSEENTLPFHFPSYEKLV 281

Query: 440 TPINGAYFLILSVLIFGVTWACCKCRK-RRWNDGVPYQELEM----GLPESVSAMNVETA 494
           TPINGAYFLI+SV+IFG  WA C CRK RR   GVPY+ELE+    GL       +VETA
Sbjct: 282 TPINGAYFLIVSVVIFGGIWAFCLCRKNRRAGTGVPYRELELSGGPGLENESVVHDVETA 341

Query: 495 EGWDEGWDDDWDENNAVKSP-GASRIGSISANGLTSRSPNRDGWEHDWNE 543
           +  DEGWDDDWDENNAVKSP GA++  SISANGLT+R+PNRDGW+HDW++
Sbjct: 342 DW-DEGWDDDWDENNAVKSPGGAAKSVSISANGLTARAPNRDGWDHDWDD 390

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439695|ref|XP_002267693.1| PREDICTED: uncharacterized protein LOC100253448 [Vitis vinifera]

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/265 (49%), Positives = 173/265 (65%), Gaps = 23/265 (8%)

Query: 283 DNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGL-HKCED-LKA 340
           D GK G  K K+    +       + G +++  DDK+ SE G   TC+GL  KC D  K 
Sbjct: 64  DPGKLGKEKSKDAPVPTTNSSKADSKGKQKEKNDDKASSELGTYGTCDGLLEKCTDPKKK 123

Query: 341 LIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSA 400
           +IACIQ+F+ GS  L  +VQNEGE TL V +T+  +V++ L+             +++ +
Sbjct: 124 MIACIQSFENGSKAL--IVQNEGENTLKVNLTVSDSVKDALE-------------MNILS 168

Query: 401 RKNSKLVLNAGNGECVL--HMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVT 458
             +SKLVLNAGN +CV   H+    SE   F +LP + +++TPI G YFL L+ L+ G  
Sbjct: 169 TGSSKLVLNAGNKDCVFENHL---ISEGNFFQWLP-HSELVTPIYGVYFLFLTALVVGAM 224

Query: 459 WACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASR 518
           W CCK RKRR   GVPYQELEMGLPES  A+NVETA GWDEGWDDDWDE+ AVKSPG   
Sbjct: 225 WTCCKFRKRRHQGGVPYQELEMGLPESSPAVNVETAAGWDEGWDDDWDEDKAVKSPGGRY 284

Query: 519 IGSISANGLTSRSPNRDGWEHDWNE 543
           +GSIS+NGLT+RS NR+GWE+DW++
Sbjct: 285 VGSISSNGLTTRSSNREGWENDWDD 309

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486642|gb|ABK95158.1| unknown [Populus trichocarpa]

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/263 (46%), Positives = 159/263 (60%), Gaps = 27/263 (10%)

Query: 294 NTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVN-ETCN--GLHKCEDLKALIACIQNFDT 350
           N  D   E +N +   V E+    K+ SE  V  E C   G+ +C D K++ ACI  FD 
Sbjct: 102 NQTDSEAEKNNDEKKKVSEEKDHHKTDSESEVGGENCTKVGIKRCTDRKSMSACILGFDN 161

Query: 351 GSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKL---- 406
            S    +L+QN GE+ L V +  P +V+N L +L   KHQT+KI                
Sbjct: 162 ESQRWIVLIQNSGERDLSVDVHAPNSVDNSLVEL--GKHQTKKI------------ILTV 207

Query: 407 ------VLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWA 460
                 +LNA NGECVLH+    S    F++ PSYD+++TPINGAYFLI++ ++FG T+ 
Sbjct: 208 GENTEVILNAKNGECVLHLDPLESHGNFFLHFPSYDQLITPINGAYFLIVTAVVFGGTFT 267

Query: 461 CCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASRIG 520
           CC  RKRR   G  YQELEM +PES  A  VETAEGWD  WDD+WDE NA+KSP A    
Sbjct: 268 CCMFRKRRREAGTAYQELEMAMPESGVANIVETAEGWDNDWDDNWDEENAIKSPAACHSA 327

Query: 521 SISANGLTSRSPNRDGWEHDWNE 543
           S+SANGLTSRS N+DGWE+DW++
Sbjct: 328 SVSANGLTSRSLNKDGWENDWDD 350

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334185891|ref|NP_001190055.1| uncharacterized protein [Arabidopsis thaliana] gi|332645288|gb|AEE78809.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/255 (49%), Positives = 162/255 (63%), Gaps = 33/255 (12%)

Query: 316 DDKSGSEFGVNETCNG-LHKCEDLKALIACIQNFDTG--------------------SGE 354
           DDK  SE    +TC G  + C    +L+AC  + D G                    +  
Sbjct: 162 DDKGSSESASVDTCVGKSNICRTENSLVACTLSIDKGYETFLDIIVIPQQFARSLLCAAN 221

Query: 355 LTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGE 414
             ILVQNEGE +L   I +P    N L++L + KHQ+QK+NIS+S   N K++L+ G G+
Sbjct: 222 WLILVQNEGETSLKAKIVLPV---NALQELTLPKHQSQKVNISISGDTN-KIILDTGKGQ 277

Query: 415 CVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRK-RRWNDGV 473
           C LHM  P+ E  +  + PSY+K++TPINGAYFLI+SV+IFG  WA C CRK RR   GV
Sbjct: 278 CALHM-YPSEESTLPFHFPSYEKLVTPINGAYFLIVSVIIFGGIWAFCLCRKNRRAGSGV 336

Query: 474 PYQELEM----GLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPG-ASRIGSISANGLT 528
           PY+ELE+    GL       +VETA+  DEGWDDDWDENNAVKSPG A++  SISANGLT
Sbjct: 337 PYRELELSGGPGLENESGVHDVETADW-DEGWDDDWDENNAVKSPGSAAKSVSISANGLT 395

Query: 529 SRSPNRDGWEHDWNE 543
           +R+PNRDGW+HDW++
Sbjct: 396 ARAPNRDGWDHDWDD 410

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139368|ref|XP_002323078.1| predicted protein [Populus trichocarpa] gi|222867708|gb|EEF04839.1| predicted protein [Populus trichocarpa]

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 87/154 (56%), Positives = 116/154 (75%)

Query: 389 HQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFL 448
           H    I I+L+  ++++++LNA NG CVLH+    S+   F+ LPSYD+++TPINGAYFL
Sbjct: 3   HIGDLIIINLTVGQSTEVILNAKNGACVLHLDPLESQANFFMNLPSYDQLITPINGAYFL 62

Query: 449 ILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDEN 508
           I++V++FG T ACC CRK R   G+ YQELEM +PES  A + ETA GWD+ WDD+WDE 
Sbjct: 63  IITVVVFGGTLACCMCRKGRLEAGIAYQELEMAMPESGVANDFETAGGWDKVWDDNWDEE 122

Query: 509 NAVKSPGASRIGSISANGLTSRSPNRDGWEHDWN 542
           NA+KSP A    S+SANGLTSR+PN+DGWE+DW+
Sbjct: 123 NAIKSPAARHSASVSANGLTSRTPNKDGWENDWD 156

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	543
TAIR|locus:504956308	351	AT1G64385 "AT1G64385" [Arabido	0.410	0.635	0.282	6.5e-10
GENEDB_PFALCIPARUM|PF14_0404	3543	PF14_0404 "hypothetical protei	0.394	0.060	0.285	1.8e-09
UNIPROTKB|Q8IL45	3543	TREP "TRAP-related protein" [P	0.394	0.060	0.285	1.8e-09
UNIPROTKB|E9PTW3	952	Dspp "Dentin sialophosphoprote	0.484	0.276	0.219	2.8e-09
MGI|MGI:109172	934	Dspp "dentin sialophosphoprote	0.530	0.308	0.196	1.6e-08
WB|WBGene00044201	746	H39E23.3 [Caenorhabditis elega	0.489	0.356	0.239	2.5e-08
FB|FBgn0037836	2743	CG14692 [Drosophila melanogast	0.589	0.116	0.254	2.6e-08
UNIPROTKB|Q5JSK6	161	HMGN5 "High mobility group nuc	0.233	0.788	0.318	6.2e-08
TAIR|locus:504955937	734	AT2G22795 "AT2G22795" [Arabido	0.451	0.333	0.247	6.5e-08
UNIPROTKB|J9NUC9	287	HMGN5 "Uncharacterized protein	0.478	0.905	0.249	7.6e-08

TAIR|locus:504956308 AT1G64385 "AT1G64385" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
 Identities = 71/251 (28%), Positives = 117/251 (46%)

Query:   262 NVTDNEKNGGVKEKSDKSNETDNGKNGGAKEKNTDDKSNEMDNGK----NGGVKEKTIDD 317
             NVTD+     +     K++  D+    G   K     S++ D GK        +E+    
Sbjct:    45 NVTDSSSKSIITIDHSKNSTNDDDTQLGDGSKMIGSDSSKSDQGKIASDESDKEEEEAVS 104

Query:   318 KSGS--EFGVN-ETCNGLHKC-EDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITI 373
             K+ S  + G + E C+  + C +D     AC++     +  L++L+QN+G++ LIVTIT 
Sbjct:   105 KNSSRKKQGFHGEECDPSNMCIDDEHEFSACLRVPGNDAPHLSLLIQNKGKRALIVTITA 164

Query:   374 PTAVENPLKQLKISKHQTQKINISLSARK----NSKLVLNAGNGECVLHMGRPA------ 423
             P  V   L++ K+   Q + I + +S +K    +S +VL +  G C L +   A      
Sbjct:   165 PVFVR--LEKDKVQLLQNEDIKVKVSIKKGGSNDSAIVLASSKGRCRLELKDLAAAAHET 222

Query:   424 -SEEKIFIYLPSY----DKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQEL 478
              S++ + +  PS      + L  I    FL+LS++I  V     K  K R N+   YQ L
Sbjct:   223 ESDDTVSVSRPSILNISSRTLIVIIMISFLVLSLVIIPVIIHVYK-NKSRGNN--KYQRL 279

Query:   479 EMGLPESVSAM 489
             +M LP S  A+
Sbjct:   280 DMELPVSNPAL 290

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GENEDB_PFALCIPARUM|PF14_0404 PF14_0404 "hypothetical protein" [Plasmodium falciparum (taxid:5833)]

 Score = 180 (68.4 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 66/231 (28%), Positives = 110/231 (47%)

Query:   113 KDVNHKDDGKNSSPLDK-GKNPEHVSGTD--LLSPPN-KGKSPEHVNGMDLLSPSPVKEN 168
             K+ N +++ +++   +K GKN      TD  +++  N K KS E  N  D +      +N
Sbjct:  1260 KNKNSQENSEDNIMTEKNGKNKSSEENTDDNIMTEKNGKDKSSEE-NANDNIMTEKNGKN 1318

Query:   169 VSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDD-KSNENGKSGGAKGKTNDDKRSETDN 227
              S    +  + + T  NG    KN   +E + D+  + E  K+  ++  T+D+  +E  N
Sbjct:  1319 KSSQGNIDDN-IMTEKNG----KNNNSQENSDDNIMTEEYEKNKNSQENTDDNIMTEK-N 1372

Query:   228 GKIGVGKEKTGDKSDETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETD-NGK 286
             GK    +E T D     +NGK+ ++ E+   D      N KN   +E +D +  T+ NGK
Sbjct:  1373 GKNKSSEENTDDNIMTEKNGKD-KSSEENANDNVMTEKNGKNKSSEENADDNIMTEKNGK 1431

Query:   287 NGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCED 337
             N  ++E N DD     +NGKN   +E + D+    E+G N+  N     ED
Sbjct:  1432 NKSSEE-NADDNIIREENGKNKSSQENSDDNIMTEEYGENK--NSHENSED 1479

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0020011 "apicoplast" evidence=RCA

UNIPROTKB|Q8IL45 TREP "TRAP-related protein" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 180 (68.4 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 66/231 (28%), Positives = 110/231 (47%)

Query:   113 KDVNHKDDGKNSSPLDK-GKNPEHVSGTD--LLSPPN-KGKSPEHVNGMDLLSPSPVKEN 168
             K+ N +++ +++   +K GKN      TD  +++  N K KS E  N  D +      +N
Sbjct:  1260 KNKNSQENSEDNIMTEKNGKNKSSEENTDDNIMTEKNGKDKSSEE-NANDNIMTEKNGKN 1318

Query:   169 VSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDD-KSNENGKSGGAKGKTNDDKRSETDN 227
              S    +  + + T  NG    KN   +E + D+  + E  K+  ++  T+D+  +E  N
Sbjct:  1319 KSSQGNIDDN-IMTEKNG----KNNNSQENSDDNIMTEEYEKNKNSQENTDDNIMTEK-N 1372

Query:   228 GKIGVGKEKTGDKSDETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETD-NGK 286
             GK    +E T D     +NGK+ ++ E+   D      N KN   +E +D +  T+ NGK
Sbjct:  1373 GKNKSSEENTDDNIMTEKNGKD-KSSEENANDNVMTEKNGKNKSSEENADDNIMTEKNGK 1431

Query:   287 NGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCED 337
             N  ++E N DD     +NGKN   +E + D+    E+G N+  N     ED
Sbjct:  1432 NKSSEE-NADDNIIREENGKNKSSQENSDDNIMTEEYGENK--NSHENSED 1479

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0020011 "apicoplast" evidence=RCA

UNIPROTKB|E9PTW3 Dspp "Dentin sialophosphoprotein" [Rattus norvegicus (taxid:10116)]

 Score = 172 (65.6 bits), Expect = 2.8e-09, P = 2.8e-09
 Identities = 63/287 (21%), Positives = 121/287 (42%)

Query:    44 GENKQDPNQIGPVKKPENVQPSNNSAPLDPKPISKTDLVSPPQNPITGNSKKLNFPRSGS 103
             G+N     + G +++ +  Q + ++  L P   ++  ++S  +   +G S+       GS
Sbjct:   313 GDNTSSSEETG-IEEGDGTQTTQDNQNLSP---TEGGIISQAEACPSGQSQNQGLETEGS 368

Query:   104 STGQNQIVPKDVNHKDDGKNSSPLDKGKNPEHVSGTDLLSPPNKG---KSPEHVN-GMDL 159
             STG    + K+      GK S    K  N  H    D  + P +G   KS  H N G   
Sbjct:   369 STGNKSSITKE-----SGKLSG--SKDSNGHHGMELDKRNSPKQGAAEKSDTHNNMGHSR 421

Query:   160 LSPSPVKENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDKSNENGKSGGAKGKTND 219
             +  S   +     DF   S      N +D        + A  + +NENG  G A   +++
Sbjct:   422 IGSSSNSDGHDSYDFDDESMQGDDPNSSDESNGSDGSDDANSESANENGNHGDASYTSDE 481

Query:   220 DKRSETDNGKIGVGKEKTGDKSDETENGKNG----RAKEKPIADKTNVTDNEKNGGVKEK 275
                +  D+       + + D SD  ++  NG     +++K  +D +N  DN+ +   + K
Sbjct:   482 SSDNGGDSDSYAGEDDSSDDTSDTDDSDSNGDDDSESEDKDESDNSN-HDNDSDS--ESK 538

Query:   276 SDKSNETDNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSE 322
             SD S+++D+  +  +   ++ D S+  D+ ++    + + D    S+
Sbjct:   539 SD-SSDSDSDSSDSSDSSDSSDSSDSSDSSESSDSSDSS-DSSDSSD 583

GO:0071460 "cellular response to cell-matrix adhesion" evidence=IEA

MGI|MGI:109172 Dspp "dentin sialophosphoprotein" [Mus musculus (taxid:10090)]

 Score = 165 (63.1 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 60/306 (19%), Positives = 125/306 (40%)

Query:    44 GENKQDPNQIGPVKKPENVQPSNNSAPLDPKPISKTD--LVSPPQNPITGNSKKLNFPRS 101
             G N  + ++   V++ ++ Q + +   L PK     +  ++S  +   +G S+       
Sbjct:   308 GHNGDNSSEENGVEEGDSTQATQDKEKLSPKDTRDAEGGIISQSEACPSGKSQDQGIETE 367

Query:   102 GSSTGQNQIVPKDVNHKDDGKNSS-----PLDKGKNPEHVSGTDLLSPPNKG-KSPEHVN 155
             G + G   I+ K+       K+S+      LDK  +P+    +D   P     KS  H N
Sbjct:   368 GPNKGNKSIITKESGKLSGSKDSNGHQGVELDKRNSPKQ-GESD--KPQGTAEKSAAHSN 424

Query:   156 -GMDLLSPSPVKENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDKSNENGKSGGAK 214
              G   +  S   +     +F   S        +D   NG  +     + +NE+G  G A 
Sbjct:   425 LGHSRIGSSSNSDGHDSYEFDDESMQGDDPKSSDE-SNGSDESDTNSESANESGSRGDAS 483

Query:   215 GKTNDDKRSETDNGKIGVGKEKTGDKSD-ETENGKNGRA-KEKPIADKTNVTDNEKNGGV 272
               T+D+   + ++     G++ + D S  + ++  NG    E    D+++ +D++ +   
Sbjct:   484 -YTSDESSDDDNDSDSHAGEDDSSDDSSGDGDSDSNGDGDSESEDKDESDSSDHDNSSDS 542

Query:   273 KEKSDKSNETDNGKNGGAKEKNTD--DKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCN 330
             + KSD S+ +D+  +      ++D  D S+  D+  +    +      S    G +++ +
Sbjct:   543 ESKSDSSDSSDDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNSSSDSSDSSGSSDSSD 602

Query:   331 GLHKCE 336
                 C+
Sbjct:   603 SSDTCD 608

GO:0005576 "extracellular region" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0031012 "extracellular matrix" evidence=ISO

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0071460 "cellular response to cell-matrix adhesion" evidence=IDA

WB|WBGene00044201 H39E23.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 162 (62.1 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 71/296 (23%), Positives = 110/296 (37%)

Query:    49 DPNQIGPVKKPENVQPSNNSAPLDPKPISKTDLVSPPQNPITGNSKKLNFPRSGSSTGQN 108
             D  +  PVK+ E   P   SA  + K  +K +   PP+     + KK    R        
Sbjct:   420 DSEKKAPVKR-EADPPKTESADSEKKAPTKRE-ADPPKTESADSEKKAPAKREADP---- 473

Query:   109 QIVPKDVNHKDDGKNSSPLDKGKNPEHVSGTDL--LSPPNKGKSPEHVNGMDLLSPSPVK 166
                PK      D +  +P  +  +P      D    +P  +   P      D    +PVK
Sbjct:   474 ---PK--TESADSEKKAPAKREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPVK 528

Query:   167 ENVS-----GTDFLSPSPVKTHVN-----GTDNRKNGGVKEKAIDDK--SNENGKSGGAK 214
                        D    +P K   +       D+ KN   K +A   K  S ++ K   AK
Sbjct:   529 READKPKTESADSEKKAPAKREADPPKTESADSEKNAPAKREADKPKTESADSEKKAPAK 588

Query:   215 GKTNDDKRSETDNGKIGVGK-EKTGDKSDETENGKNGRAKEKPIADKTNVTDNEKNGGVK 273
              + +  K    D+ K    K E    K++  ++ K   AK +    KT   D+EK   VK
Sbjct:   589 READPPKTESADSEKKAPAKREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPVK 648

Query:   274 EKSDK--SNETDNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNE 327
              ++DK  +   D+ K   AK +    K+   D+ KN   K +   DK  +E   +E
Sbjct:   649 READKPKTESADSEKKAPAKREADPPKTESADSEKNAPAKREA--DKPKTESADSE 702

GO:0040027 "negative regulation of vulval development" evidence=IMP

FB|FBgn0037836 CG14692 [Drosophila melanogaster (taxid:7227)]

 Score = 168 (64.2 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 90/354 (25%), Positives = 147/354 (41%)

Query:    67 NSAPLDPKPISKTDLVSPPQNPITGNSKKLNFPRSGSSTGQNQIVPKDVNHKDDGKNSSP 126
             NS  LD KP  + +  S  + P +G  K  +     SS  +      D     + + S+ 
Sbjct:  1140 NSTSLDEKPSPEKESTSLDEKPSSGTEKSTSLDEKSSSEKEKS-TSLDEKPSSEKEKSTS 1198

Query:   127 LDKGKNPEHVSGTDLLSPPNKGKSPEHVN-GMDLLSPSPVKENVSGTDFLSPSPVKTHVN 185
             L++  + E  + T L+  P    SPE  +  +D   PS   E  +  D  +PS  K    
Sbjct:  1199 LNERPSSEKENSTSLVENP----SPEKESTSLDE-KPSSGTEKSTSLDE-NPSSEKEKST 1252

Query:   186 GTDNRKNGGVKEKAI--DDK-SNENGKSGGAKGKTNDDKRSETD-NGKIGVGKEKTG--D 239
               + R +   KE +   D+K S+E  KS     K + +K   T  +GK    KEK+   D
Sbjct:  1253 SLNERPSSE-KENSTSQDEKPSSETEKSTSLDEKPSSEKEKSTSLDGKPSSEKEKSTSLD 1311

Query:   240 KSDETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKS---DKSNETDNGKNGGAKEKNTD 296
             ++  +E  K+    E+P ++K N T   +N   +++S   D+   +   K+    E  + 
Sbjct:  1312 ENPSSEKEKSTSLNERPSSEKENSTSLVENPSPEKESTSLDEKPSSGTEKSTSLDENPSS 1371

Query:   297 DKSNEMD-NGKNGGVKEKTI--DDKSGSEFGVNETCNGLHKCEDL-KALIACIQNFDT-- 350
             +K      N +    KE +   D+K  SE    E    L K  DL + LI   Q  D   
Sbjct:  1372 EKEKSTSLNERPSSEKENSTSQDEKPSSE---KEKSTLLDKNTDLMRDLIQVSQKVDEEM 1428

Query:   351 GSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNS 404
               G+  I V +      +  I    +V +PL++ K S  + + I   LS  K +
Sbjct:  1429 SKGKAAIAVVD------LPDINKGESVNSPLEK-KPSSQELEDIQAELSTDKET 1475

GO:0008603 "cAMP-dependent protein kinase regulator activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0032027 "myosin light chain binding" evidence=RCA

UNIPROTKB|Q5JSK6 HMGN5 "High mobility group nucleosome-binding domain-containing protein 5" [Homo sapiens (taxid:9606)]

 Score = 133 (51.9 bits), Expect = 6.2e-08, P = 6.2e-08
 Identities = 43/135 (31%), Positives = 58/135 (42%)

Query:   210 SGGAKGKTNDDKRSET-DNGKIGVG--KEKTGDKSDETENGKNGRAK--EKPIADKTNVT 264
             S   K KT  D   E  D     V   K++   + D  EN KNG AK  E P ++K  V 
Sbjct:    30 SSSRKMKTKSDMMEENIDTSAQAVAETKQEAVVEEDYNENAKNGEAKITEAPASEKEIVE 89

Query:   265 DNEKNGGVKEKSDKSNETDNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFG 324
               E+N  +++ ++K  E         K +  D K +E D  +  G   K   D+ G E G
Sbjct:    90 VKEEN--IEDATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDG 147

Query:   325 VNETCNGLHKCEDLK 339
               E  NG  K ED K
Sbjct:   148 -KEDKNGNEKGEDAK 161

GO:0000785 "chromatin" evidence=IEA

GO:0031492 "nucleosomal DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

TAIR|locus:504955937 AT2G22795 "AT2G22795" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 6.5e-08, P = 6.5e-08
 Identities = 67/271 (24%), Positives = 119/271 (43%)

Query:   106 GQNQIVPK--DVNH-KDDG-KNS-SPLDKGKNPEHVSGTDLLSPPNKGKSPEH-VNGMDL 159
             G+  ++P+  +V+  +D+G KN     + G   +  +        NK K  E  V+  D 
Sbjct:    65 GRKDLIPRVVEVDEAEDEGSKNVVESFNSGNGDDKENEIVEGGEENKEKESEGIVSNEDS 124

Query:   160 LSPSPVKENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDKSNENGKSGGAKGKTND 219
              S    K++  G +       + +  GT+  +  G +E  ++++ +  G     K  T +
Sbjct:   125 NSEIEEKKDSGGVEESEVEEKRDNGGGTEENEKSGTEESEVEERKDNGGTEENEKSGTEE 184

Query:   220 DKRSET-DNGKIGVGK-EKTGDKSDETENGK-NGRAKEKPIADKTNVTDNEKNGGVKEKS 276
              +  E  DNG  G  + EK+G +  E E  K NG  +E           NEK+G   E+S
Sbjct:   185 SEVEERKDNG--GTEENEKSGTEESEVEERKENGGTEE-----------NEKSGS--EES 229

Query:   277 DKSNETDNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCE 336
             +   + DNG    ++EK+  ++S   +   NG  +E  +++K  +  G++E+     K  
Sbjct:   230 EVEEKKDNGGTEESREKSGTEESEVEEKKDNGSSEESEVEEKKENR-GIDESEESKEKDI 288

Query:   337 DLKALIA-CIQNFDTGSGELTILVQNEGEKT 366
             D KA I    +N   G    + +V    EKT
Sbjct:   289 DEKANIEEARENNYKGDDASSEVVHESEEKT 319

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

UNIPROTKB|J9NUC9 HMGN5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 150 (57.9 bits), Expect = 7.6e-08, P = 7.6e-08
 Identities = 72/289 (24%), Positives = 127/289 (43%)

Query:    63 QPSNNSAPLDPKPISKTDLVSPPQNPITGNSKKLN--FPRSGSSTGQNQIVPKDVNHKDD 120
             +P   SA L   P+  T  V P +       K  N    ++  +T   Q V   +  + D
Sbjct:    15 EPRRRSARLSAMPVPVTPEVKPKRATPKQKMKTKNDMMEKNTDTTESKQEV---IEGECD 71

Query:   121 GKNS-SPLDKGKNPEHVSGTDLLSPPNKGKSPEHVNGMDLLSPS-PVKENVSGTDFLSPS 178
              +N  + + + + PE +   ++    N+    E +   + ++ +    E      ++   
Sbjct:    72 AENGETKITEPQTPEKLL-EEMKEEKNEDVEEEGIEMKEAVATAFSSSEGKDQEGYVEDQ 130

Query:   179 PVKTHVNGTDNRKNGGVKEKAIDDKSNENGKSGGAKGKTNDDKRSETDNGKIGVG----- 233
               +T  N  D ++    K K  D K +E+GK  G  GK  + K    + GK G G     
Sbjct:   131 KKRTE-NREDEKEYKDKKGKG-DRKKDEDGKGKG-DGKEEEKKEKNGEEGK-GKGANSKE 186

Query:   234 -KEKTGDKSDETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETDNGK-NGGAK 291
              +EK   K DE E G++G+ K + + +     +NEK+ G K++ D   E ++G+ +   K
Sbjct:   187 EEEKEKKKGDEKE-GEDGKGKGEDVKE----FENEKDTGEKKQGDDRKENEDGRVDKDGK 241

Query:   292 EKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCEDLKA 340
             E+   +K  E+ N K GG KEK  ++    E G  +  +G +  E+ KA
Sbjct:   242 EEKRGNKE-EVGN-KKGG-KEK--EEDGAEENGNGDGKDGRNGKENKKA 285

GO:0031492 "nucleosomal DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000785 "chromatin" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: AT3G51580 unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 25 plant structures; EXPRESSED DURING- 15 growth stages; Has 1438 Blast hits to 1284 proteins in 200 species- Archae - 0; Bacteria - 339; Metazoa - 353; Fungi - 200; Plants - 269; Viruses - 37; Other Eukaryotes - 240 (source- NCBI BLink). (390 aa) (Arabidopsis thaliana)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	543
pfam09726	680	pfam09726, Macoilin, Transmembrane protein	0.002

>gnl|CDD|220365 pfam09726, Macoilin, Transmembrane protein

 Score = 40.7 bits (95), Expect = 0.002
 Identities = 29/199 (14%), Positives = 58/199 (29%), Gaps = 22/199 (11%)

Query: 142 LSPPNKGKSPEHVNGMDLLSPSPVKENVSGTDFLSPSPVKTHVN------GTDNRKNGGV 195
           LS  +K KS     G+         +N  G   LS S             G D+  +   
Sbjct: 209 LSVTDKEKSEASSKGLTSTKELVPVQNSGGNHSLSKSSNSQTPELEYSEKGKDHHHSHNH 268

Query: 196 KEKAIDDKSNE-------------NGKSGGAKGKTNDDKRSETDNGKIGVGKEKTGDKSD 242
           +  +I   ++                        ++       +              S 
Sbjct: 269 QHHSIGINNHHSKHADSKLQTIEVIENHSNKSRPSSSSTNGSKETTSNSSSAAAGSIGSK 328

Query: 243 ETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETDNGKNGGAKEKNTDDKSNEM 302
            +++ K+    +   + K++   +  NG V   S   NE+   +   +     D K +  
Sbjct: 329 SSKSAKHSNRNKSNSSPKSH---SSANGSVPSSSVSDNESKQKRASKSSSGARDSKKDAS 385

Query: 303 DNGKNGGVKEKTIDDKSGS 321
               NG V+    ++K  +
Sbjct: 386 GMSANGTVENCIPENKIST 404

This entry is a highly conserved protein present in eukaryotes. Length = 680

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	543
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	88.78
PF05454	290	DAG1: Dystroglycan (Dystrophin-associated glycopro	88.7
PHA03283	542	envelope glycoprotein E; Provisional	88.68
PF07213	79	DAP10: DAP10 membrane protein; InterPro: IPR009861	80.66

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=88.78  E-value=0.067  Score=47.10  Aligned_cols=23  Identities=26%  Similarity=0.309  Sum_probs=9.0

Q ss_pred             HHHHHHHhhhceeEEEeeccccc
Q 009107          447 FLILSVLIFGVTWACCKCRKRRW  469 (543)
Q Consensus       447 fLv~TvVLiGgvWaCCkfRKrR~  469 (543)
                      |+||+++||..+.+||+++|||+
T Consensus         5 ~~iii~~i~l~~~~~~~~~rRR~   27 (130)
T PF12273_consen    5 FAIIIVAILLFLFLFYCHNRRRR   27 (130)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            33333333333334444444443

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5

Probab=88.70  E-value=0.13  Score=52.33  Aligned_cols=23  Identities=26%  Similarity=0.474  Sum_probs=0.0

Q ss_pred             HHHHHHhhhceeEEEeecccccC
Q 009107          448 LILSVLIFGVTWACCKCRKRRWN  470 (543)
Q Consensus       448 Lv~TvVLiGgvWaCCkfRKrR~q  470 (543)
                      +|+++|||+++.|||.+||||.-
T Consensus       154 VI~~iLLIA~iIa~icyrrkR~G  176 (290)
T PF05454_consen  154 VIAAILLIAGIIACICYRRKRKG  176 (290)
T ss_dssp             -----------------------
T ss_pred             HHHHHHHHHHHHHHHhhhhhhcc
Confidence            44555666777788888877653

5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.

>PHA03283 envelope glycoprotein E; Provisional

Probab=88.68  E-value=0.82  Score=50.30  Aligned_cols=72  Identities=24%  Similarity=0.393  Sum_probs=39.6

Q ss_pred             chhhHHHHHHHHhhhceeEEEeecccccCCCCCceeeec------CCCCccCCccc-c-cCCCcCCCCCCCCCcccCCCC
Q 009107          442 INGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEM------GLPESVSAMNV-E-TAEGWDEGWDDDWDENNAVKS  513 (543)
Q Consensus       442 I~GAYfLv~TvVLiGgvWaCCkfRKrR~qdGvpYQELEM------eLP~S~ga~ev-E-TaDGWDdgWDDDWDDEEApKS  513 (543)
                      +.|+--++.++|+..++|+|+.||++++.   +|.=|-=      .||.-..-..+ | -+.-=||..|+|=|||-++.+
T Consensus       403 ~~~~~~~~~~~~~~l~vw~c~~~r~~~~~---~y~ilnpf~~vytslptn~~~~~~f~~~~~~~ddsf~~~~de~~~~~~  479 (542)
T PHA03283        403 LLAIICTCAALLVALVVWGCILYRRSNRK---PYEVLNPFETVYTSVPSNDPEVLVFERLASDSDDSFDSSSDEELEPPP  479 (542)
T ss_pred             HHHHHHHHHHHHHHHhhhheeeehhhcCC---cccccCCCccceeccCCCCCcccceeecccCccccccccccccccCCC
Confidence            33444444566777789999998777665   4443332      24433332111 1 122235677777666666655


Q ss_pred             CCC
Q 009107          514 PGA  516 (543)
Q Consensus       514 PS~  516 (543)
                      |..
T Consensus       480 ~~~  482 (542)
T PHA03283        480 PPG  482 (542)
T ss_pred             CCC
Confidence            553

>PF07213 DAP10: DAP10 membrane protein; InterPro: IPR009861 This family consists of several mammalian DAP10 membrane proteins

Probab=80.66  E-value=0.62  Score=40.23  Aligned_cols=28  Identities=32%  Similarity=0.564  Sum_probs=23.2

Q ss_pred             HHHHHHhhhceeEEEeecccccC-CCCCc
Q 009107          448 LILSVLIFGVTWACCKCRKRRWN-DGVPY  475 (543)
Q Consensus       448 Lv~TvVLiGgvWaCCkfRKrR~q-dGvpY  475 (543)
                      +++|+||+++++.|-++|||++| ++--|
T Consensus        44 ~vlTLLIv~~vy~car~r~r~~~~~~kvY   72 (79)
T PF07213_consen   44 AVLTLLIVLVVYYCARPRRRPTQEDDKVY   72 (79)
T ss_pred             HHHHHHHHHHHHhhcccccCCcccCCEEE
Confidence            56999999999999999999888 54333

In activated mouse natural killer (NK) cells, the NKG2D receptor associates with two intracellular adaptors, DAP10 and DAP12, which trigger phosphatidyl inositol 3 kinase (PI3K) and Syk family protein tyrosine kinases, respectively. It has been suggested that the DAP10-PI3K pathway is sufficient to initiate NKG2D-mediated killing of target cells [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	543
2ys4_A	122	Hydrocephalus-inducing protein homolog; hydin, PAP	88.83
3lge_E	31	Sorting nexin-9; complex, glycolysis, actin dynami	85.95

>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.83  E-value=4.1  Score=33.67  Aligned_cols=87  Identities=13%  Similarity=0.144  Sum_probs=62.0

Q ss_pred             cccCCCcccccccceeeeeeccCCCCcceEEEEEeCCCceEEEEEEcCccccCCCceeeecccceeEEEEEEecCC----
Q 009107          327 ETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARK----  402 (543)
Q Consensus       327 eeCDpshkC~d~kkmiACLqVpgn~S~~LsLLVQNkGe~~LkVtItAPd~V~~~l~eL~L~KhqskKVnISis~~n----  402 (543)
                      -.|.+..-+.+.-.-+-|-.++-.......|+|+|.|.-+...++..+..+.+.+..-.|.-+++.+|+|++.-..    
T Consensus        17 l~a~~~~~~l~~p~~l~fg~~~v~~~~~~~~~l~N~g~~~~~f~~~~~~~F~i~P~~g~L~pg~~~~i~V~F~P~~~g~~   96 (122)
T 2ys4_A           17 IKARGARAILDFPDKLNFSTCPVKYSTQKILLVRNIGNKNAVFHIKTCRPFSIEPAIGTLNVGESMQLEVEFEPQSVGDH   96 (122)
T ss_dssp             SCCCSCCCCCCCCSEECCCSEESSSCEEEEEEEECCSSSCEEEEEECCTTEEEESSEEEECTTCEEEEEEEECCSSSBCC
T ss_pred             EEEEcCCcEECCCCeeecCCeecCCeEEEEEEEEECCCCCEEEEEecCCCeEEECCcCEECCCCEEEEEEEEEcCCCccE
Confidence            4554443333422344444555567788999999999999999998887788999999999999999999998322    


Q ss_pred             CceEEEEeccC
Q 009107          403 NSKLVLNAGNG  413 (543)
Q Consensus       403 s~~IVLkAGkG  413 (543)
                      ...|++...++
T Consensus        97 ~~~l~v~~~~g  107 (122)
T 2ys4_A           97 SGRLIVCYDTG  107 (122)
T ss_dssp             CCBCEEEESSS
T ss_pred             EEEEEEEECCC
Confidence            24455554433

>3lge_E Sorting nexin-9; complex, glycolysis, actin dynamics, LC4, hydrophobic pocket acetylation, lyase, phosphoprotein, schiff base; 2.20A {Oryctolagus cuniculus}

Probab=85.95  E-value=0.26  Score=35.16  Aligned_cols=13  Identities=62%  Similarity=1.444  Sum_probs=10.5

Q ss_pred             CCCcCCCCCCCCC
Q 009107          494 AEGWDEGWDDDWD  506 (543)
Q Consensus       494 aDGWDdgWDDDWD  506 (543)
                      +-|=|+.||||||
T Consensus         7 ~~G~DDDWDdeWD   19 (31)
T 3lge_E            7 ATGDDDDWDEDWD   19 (31)
T ss_pred             CCCCccccccccc
Confidence            3466889999999

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00