Citrus Sinensis ID: 009150

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540--
Protein Sequence
MAPKKTSHVSQSPIPIGNCEVTVEAKKFTCESDPNTLQISISRTAKIKIAVREDLKSSNDTTHSKSEEKGEEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVSLKFCFPVKPCEKSSLVTVNRSLEAERLVMNGCSRDGAKSSGCSRSLEPVHGSGELAAFENVHCSNMTVGAAQIGTDTGAKHCSCSQGTKRRWEASTSSLKSKKVKGSSCADCHLDSDRSLASAGGETVGLSGCKPLREITPSNHVTVDCTGNDAKEDRPVCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKYL
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEEcccEEEEccccEEEEEEccccEEEEEEEccccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHccccccEEEEEEEccccccHHHHHHHHHcEEEccccccccccHHHccccHHHccccHHHHHHHHHHHcccccEEEEEEccccccccEEEccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHHcccEEcccccccEEEEEccccccHHHHHHHHcccEEEcHHHHHHHHHccccccccccccccHHHHHHccccHHHHHHHHHccccccccccEEEEEccccccHHHHHHHHHHcccEEEcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEcccEEEEEEcccEEEEcccccEEEEcccccEEEEEEEcccccccccccccccccccccEEEEEcccccccHHcHHHHHHHHHHHHHHcccHHHHHccccccHHHHHHcccccEEEEEEEccccccccEEEEEEEEEEEcccccEEEEEHHEEcHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEccccccccHHccccEEEEEEccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHcccEcccHHHHcHEEHHHHHHHHHHHHHHHccccEccHHHHHHHHHcccccccccEEEccHHHHHHccccHHHHHHHHHHccccccccEEEEEcccccccHHHHHHHHHHccccHHHHcc
Coil and Loop (DISEMBL)
mapkktshvsqspipigncevtVEAKkftcesdpntlqISISRTAKIKIAVRedlkssndtthskseekgEEYIFVLvnpkdaedscskSYLQDVLQIYSRelptmnyaantgkrsMFLEKCVLNGKYCTLLlkssfmddddVVVAAITYQivpadtqyaevPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIfcwgdkesegfwhkqdtsadtavslkfcfpvkpceksslvTVNRSLEAERLVMngcsrdgakssgcsrslepvhgsgelaafenvhcsnmtvgaaqigtdtgakhcscsqgtkrrWEASTsslkskkvkgsscadchldsdrslasaggetvglsgckplreitpsnhvtvdctgndakedrpvcttsAAFISKEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLggavtsdgststhvVTGKVRKTLNFLTALCsgawivspnwlkesfregrfvdessymlnddDYVLKYRSELKDSVLRAkarpggllrgyNIIMAAHIQPPIKTLSAIVRSaggnvsskyl
Flexible Loop (DISEMBL)
mapkktshvsqspipigncEVTVEAKKFtcesdpntlqisisrtakikiavredlkssndtthskseekgeeyIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVSLKFCfpvkpceksslvTVNRSLEAERLVMNGCSRDGAKSSGCSRSLEPVHGSGELAAFENVHCSNMTVGAAQIGTDTGAKHCSCSQGTKRRWEastsslkskkvkgsscaDCHLDSDRSLASAGGETVGLsgckplreitpsnhvtvdctgndakedrpVCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDlggavtsdgststhvvtgKVRKTLNFLTALCSgawivspnwlKESFREGrfvdessymlnddDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRsaggnvsskyl
Low Complexity Region (SEG)
MAPKKTSHVSQSPIPIGNCEVTVEAKKFTCESDPNTLQISISRTAKIKIAVREDLKSSNDTTHSKSEEKGEEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVSLKFCFPVKPCEKSSLVTVNRSLEAERLVMNGCSRDGAKSSGCSRSLEPVHGSGELAAFENVHCSNMTVGAAQIGTDTGAKHCSCSQGTKRRWEAstsslkskkvkgssCADCHLDSDRSLASAGGETVGLSGCKPLREITPSNHVTVDCTGNDAKEDRPVCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKYL
Disordered region (IsUnstruct)
***************IGNCEVTVEAKKFTCESD*NTLQISISRTAKIKIA**********************YIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVSLKFCFPVKPCEKSSLVTVNRSLEAERLVM*************************LAAFENVHCSNMTVGAAQIGTDTGA*****************************************************CKPLREITPSNHVTVDCTGN****DRPVCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIV************
Disordered Region (DISOPRED)
*****************NCEVTVEAKKFT***************AKIKIAVREDLKS************GEEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPT***********MFLEKCVLNGKYCTLLLK****DDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEG**************************************************************************************************************************************************************************************************IMLMNIAD*****HLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRS***************LLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK**
Disordered Region (DISEMBL)
************PIPIGNCEVTVEAKKFTCESDPNTLQISISRTAKIKIAVRED**************KGEEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVSLKFCFPVKPCEKSSLVTVNRSLEAERLVMNGCS***************VHGSGELAAFENVHCSNMTVGAAQIGTD**********************************DCHLDSDRSLASAGGETVGLSGCKPLREITPSNHVTVDCTGNDAKEDRPVCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVT********VVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAG********
Disordered Region (DISPRO)
***********SPIPIGNCEVTVEAKKFTCESDPNTLQISISRTAKIKIAVREDLKSS************EEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVSLKFCFPVK************************************************************************************************************************************************************************KCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKYL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPKKTSHVSQSPIPIGNCEVTVEAKKFTCESDPNTLQISISRTAKIKIAVREDLKSSNDTTHSKSEEKGEEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVSLKFCFPVKPCEKSSLVTVNRSLEAERLVMNGCSRDGAKSSGCSRSLEPVHGSGELAAFENVHCSNMTVGAAQIGTDTGAKHCSCSQGTKRRWEASTSSLKSKKVKGSSCADCHLDSDRSLASAGGETVGLSGCKPLREITPSNHVTVDCTGNDAKEDRPVCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKYL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	542	2.2.26 [Sep-21-2011]
Q6ZW49	1069	PAX-interacting protein 1	yes	no	0.215	0.109	0.378	2e-15
A0JNA8	984	PAX-interacting protein 1	yes	no	0.215	0.118	0.378	3e-15
Q90WJ3	1256	PAX-interacting protein 1	N/A	no	0.215	0.093	0.361	8e-15
Q7YR40	2171	Mediator of DNA damage ch	no	no	0.252	0.063	0.299	4e-14
Q5U2M8	1279	Mediator of DNA damage ch	no	no	0.267	0.113	0.316	5e-14
Q14676	2089	Mediator of DNA damage ch	no	no	0.252	0.065	0.299	5e-14
Q6NZQ4	1056	PAX-interacting protein 1	yes	no	0.215	0.110	0.361	8e-14
Q5TM68	2173	Mediator of DNA damage ch	no	no	0.252	0.063	0.299	1e-13
Q767L8	2042	Mediator of DNA damage ch	no	no	0.293	0.077	0.272	1e-13
Q5PSV9	1707	Mediator of DNA damage ch	no	no	0.206	0.065	0.350	2e-13

>sp|Q6ZW49|PAXI1_HUMAN PAX-interacting protein 1 OS=Homo sapiens GN=PAXIP1 PE=1 SV=2

 Score = 84.3 bits (207), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 2/119 (1%)

Query: 422  LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
            LGG V       TH++  KV +T+ FLTA+     IV+P WL+E FR  +F+DE +Y+L 
Sbjct: 889  LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRCQKFIDEQNYILR 948

Query: 482  DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK 540
            D +  + +   L++S+ RA   P  L +     +   I P + T+ AIV  AGG V SK
Sbjct: 949  DAEAEVLFSFSLEESLKRAHVSP--LFKAKYFYITPGICPSLSTMKAIVECAGGKVLSK 1005

Involved in DNA damage response and in transcriptional regulation through histone methyltransferase (HMT) complexes. Plays a role in early development. In DNA damage response is required for cell survival after ionizing radiation. In vitro shown to be involved in the homologous recombination mechanism for the repair of double-strand breaks (DSBs). Its localization to DNA damage foci requires RNF8 and UBE2N. Recruits TP53BP1 to DNA damage foci and, at least in particular repair processes, effective DNA damage response appears to require the association with TP53BP1 phosphorylated by ATM at 'Ser-25'. Together with TP53BP1 regulates ATM association. Recruits PA1 to sites of DNA damage and the PA1:PAXIP1 complex is required for cell survival in response to DNA damage; the function is probbaly independent of MLL-containing histone methyltransferase (HMT) complexes. Promotes ubiquitination of PCNA following UV irradiation and may regulate recruitment of polymerase eta and RAD51 to chromatin after DNA damage. Proposed to be involved in transcriptional regulation by linking MLL-containing histone methyltransferase (HMT) complexes to gene promoters by interacting with promoter-bound transcription factors such as PAX2. Associates with gene promoters that are known to be regulated by MLL2. During immunoglobulin class switching in activated B-cells is involved in trimethylation of histone H3 at 'Lys-4' and in transcription initiation of downstream switch regions at the immunoglobulin heavy-chain (Igh) locus; this function appears to involve the recruitment of MLL-containing HMT complexes.
Homo sapiens (taxid: 9606)

>sp|A0JNA8|PAXI1_BOVIN PAX-interacting protein 1 OS=Bos taurus GN=PAXIP1 PE=2 SV=1

 Score = 84.0 bits (206), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 2/119 (1%)

Query: 422 LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
           LGG V       TH++  KV +T+ FLTA+     IV+P WL+E F+  +FVDE +Y+L 
Sbjct: 804 LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQKFVDEQNYLLR 863

Query: 482 DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK 540
           D +  + +   L++S+ RA A P  L +     +   I P + T+ AIV  AGG V S+
Sbjct: 864 DAEAEVLFSFSLEESLRRAHASP--LFKAKYFYITPGICPSLSTMKAIVECAGGKVLSR 920

Involved in DNA damage response and in transcriptional regulation through histone methyltransferase (HMT) complexes. Plays a role in early development. In DNA damage response is required for cell survival after ionizing radiation. In vitro shown to be involved in the homologous recombination mechanism for the repair of double-strand breaks (DSBs). Its localization to DNA damage foci requires RNF8 and UBE2N. Recruits TP53BP1 to DNA damage foci and, at least in particular repair processes, effective DNA damage response appears to require the association with TP53BP1 phosphorylated by ATM. Together with TP53BP1 regulates ATM association. Recruits PA1 to sites of DNA damage and the PA1:PAXIP1 complex is required for cell survival in response to DNA damage; the function is probbaly independent of MLL-containing histone methyltransferase (HMT) complexes. Promotes ubiquitination of PCNA following UV irradiation and may regulate recruitment of polymerase eta and RAD51 to chromatin after DNA damage. Proposed to be involved in transcriptional regulation by linking MLL-containing histone methyltransferase (HMT) complexes to gene promoters by interacting with promoter-bound transcription factors such as PAX2. Associates with gene promoters that are known to be regulated by MLL2. During immunoglobulin class switching in activated B-cells is involved in trimethylation of histone H3 at 'Lys-4' and in transcription initiation of downstream switch regions at the immunoglobulin heavy-chain (Igh) locus; this function appears to involve the recruitment of MLL-containing HMT complexes.

Bos taurus (taxid: 9913)

>sp|Q90WJ3|PAXI1_XENLA PAX-interacting protein 1 OS=Xenopus laevis GN=paxip1 PE=1 SV=1

 Score = 82.4 bits (202), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 2/119 (1%)

Query: 422  LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
            LGG V       TH+V  KV +T+ FLTA+     IV+P WL ESF+  +F +E +Y+L 
Sbjct: 1076 LGGEVADTAQKCTHLVANKVTRTVKFLTAISVAKHIVTPEWLDESFKSQKFAEEQNYILR 1135

Query: 482  DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK 540
            D +  + +   L++S+ +A   P  L +G    +   I P + T+ AIV  AGG + +K
Sbjct: 1136 DAEAEVLFCFSLEESLKKAHVNP--LFKGKYFYITPGICPSLSTMKAIVECAGGKILTK 1192

Involved in DNA damage response. Promotes ubiquitination of PCNA following UV irradiation and may regulate recruitment of polymerase eta and rad51 to chromatin after DNA damage. May function as transcriptional cofactor in TGF beta signaling. Accentuates smad2-dependent transcription.

Xenopus laevis (taxid: 8355)

>sp|Q7YR40|MDC1_PANTR Mediator of DNA damage checkpoint protein 1 OS=Pan troglodytes GN=MDC1 PE=3 SV=1

 Score = 80.1 bits (196), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 397  KCFRIMLMNIADDSKKVHLTKVIED--------LGGAVTSDGSTSTHVVTGKVRKTLNFL 448
            +  R   +N    + KV  T V++         LGG++    + ++H+VT ++R+T+ FL
Sbjct: 1961 RSLRRTKLNQESTAPKVLFTGVVDARGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFL 2020

Query: 449  TALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLL 508
             AL  G  I+S +WL +S + G F+    Y++ D +    +   L+D++ RA+ R   LL
Sbjct: 2021 CALGRGIPILSLDWLHQSHKAGFFLPPDEYVVTDPEQEKNFGFSLQDALSRARER--RLL 2078

Query: 509  RGYNIIMAAHIQPPIKTLSAIVRSAGG 535
             GY I +   +QPP   +  I+   GG
Sbjct: 2079 EGYEIYVTPGVQPPPPQMGEIISCCGG 2105

Required for checkpoint mediated cell cycle arrest in response to DNA damage within both the S phase and G2/M phases of the cell cycle. May serve as a scaffold for the recruitment of DNA repair and signal transduction proteins to discrete foci of DNA damage marked by 'Ser-139' phosphorylation of histone H2AFX. Also required for downstream events subsequent to the recruitment of these proteins. These include phosphorylation and activation of the ATM, CHEK1 and CHEK2 kinases, and stabilization of TP53 and apoptosis. ATM and CHEK2 may also be activated independently by a parallel pathway mediated by TP53BP1.

Pan troglodytes (taxid: 9598)

>sp|Q5U2M8|MDC1_RAT Mediator of DNA damage checkpoint protein 1 OS=Rattus norvegicus GN=Mdc1 PE=2 SV=2

 Score = 80.1 bits (196), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 10/155 (6%)

Query: 391  EFQSNGKCFRIMLMNIADDSKKVHLTKVIED--------LGGAVTSDGSTSTHVVTGKVR 442
            E Q N    R    N    + KV  T V++         LGG++ S  + ++H+VT ++R
Sbjct: 1066 ETQGNPTRSRRTKPNQEAAAPKVLFTGVVDSRGERAVLALGGSLASSVNEASHLVTDRIR 1125

Query: 443  KTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKA 502
            +T+ FL A+  G  I+S NWL +S + G F+    Y++ D +    +   L+DS+ RA+ 
Sbjct: 1126 RTVKFLCAVGKGIPILSLNWLYQSRKAGCFLPPDDYLVTDPEQEKNFSFSLRDSLSRARE 1185

Query: 503  RPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNV 537
            R   LL  Y I +   +QPP   +  I+   GG V
Sbjct: 1186 R--RLLEDYEIHVTPGVQPPPPQMGEIISCCGGTV 1218

Required for checkpoint mediated cell cycle arrest in response to DNA damage within both the S phase and G2/M phases of the cell cycle. May serve as a scaffold for the recruitment of DNA repair and signal transduction proteins to discrete foci of DNA damage marked by 'Ser-139' phosphorylation of histone H2AFX. Also required for downstream events subsequent to the recruitment of these proteins. These include phosphorylation and activation of the ATM, CHEK1 and CHEK2 kinases, and stabilization of TP53 and apoptosis. ATM and CHEK2 may also be activated independently by a parallel pathway mediated by TP53BP1.

Rattus norvegicus (taxid: 10116)

>sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3

 Score = 79.7 bits (195), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 397  KCFRIMLMNIADDSKKVHLTKVIED--------LGGAVTSDGSTSTHVVTGKVRKTLNFL 448
            +  R   +N    + KV  T V++         LGG++    + ++H+VT ++R+T+ FL
Sbjct: 1879 RSLRRTKLNQESTAPKVLFTGVVDARGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFL 1938

Query: 449  TALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLL 508
             AL  G  I+S +WL +S + G F+    Y++ D +    +   L+D++ RA+ R   LL
Sbjct: 1939 CALGRGIPILSLDWLHQSRKAGFFLPPDEYVVTDPEQEKNFGFSLQDALSRARER--RLL 1996

Query: 509  RGYNIIMAAHIQPPIKTLSAIVRSAGG 535
             GY I +   +QPP   +  I+   GG
Sbjct: 1997 EGYEIYVTPGVQPPPPQMGEIISCCGG 2023

Required for checkpoint mediated cell cycle arrest in response to DNA damage within both the S phase and G2/M phases of the cell cycle. May serve as a scaffold for the recruitment of DNA repair and signal transduction proteins to discrete foci of DNA damage marked by 'Ser-139' phosphorylation of histone H2AFX. Also required for downstream events subsequent to the recruitment of these proteins. These include phosphorylation and activation of the ATM, CHEK1 and CHEK2 kinases, and stabilization of TP53 and apoptosis. ATM and CHEK2 may also be activated independently by a parallel pathway mediated by TP53BP1.

Homo sapiens (taxid: 9606)

>sp|Q6NZQ4|PAXI1_MOUSE PAX-interacting protein 1 OS=Mus musculus GN=Paxip1 PE=1 SV=1

 Score = 79.3 bits (194), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 2/119 (1%)

Query: 422 LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
           LGG V       TH++  KV +T+ FLTA+     IV+P+WL+E F+   F+DE +Y+L 
Sbjct: 876 LGGEVAECTKKCTHLIASKVTRTVKFLTAISVVKHIVTPDWLEECFKRQTFIDEQNYILR 935

Query: 482 DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK 540
           D +  + +   L++S+ RA   P  L +     +   I P + T+ AIV  AGG V +K
Sbjct: 936 DAEAEVLFSFSLEESLKRAHVSP--LFKTKYFYITPGICPSLATMKAIVECAGGKVLAK 992

Involved in DNA damage response and in transcriptional regulation through histone methyltransferase (HMT) complexes. Plays a role in early development. In DNA damage response is required for cell survival after ionizing radiation. In vitro shown to be involved in the homologous recombination mechanism for the repair of double-strand breaks (DSBs). Its localization to DNA damage foci requires Rnf8 and Ube2n. Recruits Tp53bp1 to DNA damage foci and, at least in particular repair processes, effective DNA damage response appears to require the association with Tp53bp1 phosphorylated by Atm. Together with Tp53bp1 regulates Atm association. Recruits Pa1 to sites of DNA damage and the Pa1:Paxip1 complex is required for cell survival in response to DNA damage; the function is probbaly independent of MLL-containing histone methyltransferase (HMT) complexes. Promotes ubiquitination of PCNA following UV irradiation and may regulate recruitment of polymerase eta and Rad51 to chromatin after DNA damage. Proposed to be involved in transcriptional regulation by linking MLL-containing histone methyltransferase (HMT) complexes to gene promoters by interacting with promoter-bound transcription factors such as Pax2. Associates with gene promoters that are known to be regulated by Mll2. During immunoglobulin class switching in activated B-cells is involved in trimethylation of histone H3 at 'Lys-4' and in transcription initiation of downstream switch regions at the immunoglobulin heavy-chain (Igh) locus; this function appears to involve the recruitment of MLL-containing HMT complexes.

Mus musculus (taxid: 10090)

>sp|Q5TM68|MDC1_MACMU Mediator of DNA damage checkpoint protein 1 OS=Macaca mulatta GN=MDC1 PE=3 SV=1

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 397  KCFRIMLMNIADDSKKVHLTKVIED--------LGGAVTSDGSTSTHVVTGKVRKTLNFL 448
            +  R   +N    + KV  T V++         LGG++    + ++H+VT ++R+T+ FL
Sbjct: 1963 RSLRRTKLNQESTAPKVLFTGVVDAQGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFL 2022

Query: 449  TALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLL 508
             AL  G  I+S +WL +S + G F+    Y++ D +    +   L+D++ RA+ R   LL
Sbjct: 2023 CALGRGIPILSLDWLHQSRKAGCFLPPDEYVVTDPEQEKNFGFSLQDALSRARER--RLL 2080

Query: 509  RGYNIIMAAHIQPPIKTLSAIVRSAGG 535
             GY I +   +QPP   +  I+   GG
Sbjct: 2081 EGYEIYVTPGVQPPPPQMGEIISCCGG 2107

Required for checkpoint mediated cell cycle arrest in response to DNA damage within both the S phase and G2/M phases of the cell cycle. May serve as a scaffold for the recruitment of DNA repair and signal transduction proteins to discrete foci of DNA damage marked by 'Ser-139' phosphorylation of histone H2AFX. Also required for downstream events subsequent to the recruitment of these proteins. These include phosphorylation and activation of the ATM, CHEK1 and CHEK2 kinases, and stabilization of TP53 and apoptosis. ATM and CHEK2 may also be activated independently by a parallel pathway mediated by TP53BP1.

Macaca mulatta (taxid: 9544)

>sp|Q767L8|MDC1_PIG Mediator of DNA damage checkpoint protein 1 OS=Sus scrofa GN=MDC1 PE=3 SV=1

 Score = 78.2 bits (191), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 6/165 (3%)

Query: 373  DAKEDRPVCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGST 432
            D  E+ P    S +    +        R++   + D        + +  LGG++ S  + 
Sbjct: 1820 DQTEEEPRGVPSRSLRRTKPAQESTAPRVLFTGVVD----ARGERAVLALGGSLASSVAE 1875

Query: 433  STHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSE 492
            ++H+VT ++R+T+ FL AL  G  I+S +WL +S + G F+    Y++ D +    +   
Sbjct: 1876 ASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPDEYVVTDPEQEKNFGFS 1935

Query: 493  LKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNV 537
            L++++ RA+ R   LL GY I +   +QPP   +  I+   GG V
Sbjct: 1936 LREALSRARER--KLLEGYEIHVTPGVQPPPPQMGEIISCCGGTV 1978

Required for checkpoint mediated cell cycle arrest in response to DNA damage within both the S phase and G2/M phases of the cell cycle. May serve as a scaffold for the recruitment of DNA repair and signal transduction proteins to discrete foci of DNA damage marked by 'Ser-139' phosphorylation of histone H2AFX. Also required for downstream events subsequent to the recruitment of these proteins. These include phosphorylation and activation of the ATM, CHEK1 and CHEK2 kinases, and stabilization of TP53 and apoptosis. ATM and CHEK2 may also be activated independently by a parallel pathway mediated by TP53BP1.

Sus scrofa (taxid: 9823)

>sp|Q5PSV9|MDC1_MOUSE Mediator of DNA damage checkpoint protein 1 OS=Mus musculus GN=Mdc1 PE=1 SV=1

 Score = 77.8 bits (190), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 2/114 (1%)

Query: 422  LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
            LGG++ S  + ++H+VT ++R+T+ FL AL  G  I+S NWL +S + G F+    Y++ 
Sbjct: 1530 LGGSLASSVNEASHLVTDRIRRTVKFLCALGKGIPILSLNWLYQSRKAGCFLPPDDYLVT 1589

Query: 482  DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGG 535
            D +    +   L+DS+ RA+ R   LL  Y I +   +QPP   +  I+   GG
Sbjct: 1590 DPEQEKNFSFSLRDSLCRARER--RLLEDYEIHVTPGVQPPPPQMGEIISCCGG 1641

Required for checkpoint mediated cell cycle arrest in response to DNA damage within both the S phase and G2/M phases of the cell cycle. May serve as a scaffold for the recruitment of DNA repair and signal transduction proteins to discrete foci of DNA damage marked by 'Ser-139' phosphorylation of histone H2AFX. Also required for downstream events subsequent to the recruitment of these proteins. These include phosphorylation and activation of the ATM, CHEK1 and CHEK2 kinases, and stabilization of TP53 and apoptosis. ATM and CHEK2 may also be activated independently by a parallel pathway mediated by TP53BP1.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	542
225441345	676	PREDICTED: uncharacterized protein LOC10	0.976	0.782	0.503	1e-155
297739885	666	unnamed protein product [Vitis vinifera]	0.909	0.740	0.500	1e-143
87241454	650	GCN5-related N-acetyltransferase; BRCT [	0.963	0.803	0.484	1e-136
186507168	612	N-acetyltransferase [Arabidopsis thalian	0.944	0.836	0.455	1e-120
147836147	1945	hypothetical protein VITISV_041860 [Viti	0.887	0.247	0.434	1e-112
224086906	531	predicted protein [Populus trichocarpa]	0.719	0.734	0.506	1e-112
186507172	549	N-acetyltransferase [Arabidopsis thalian	0.828	0.817	0.471	1e-109
326487546	595	predicted protein [Hordeum vulgare subsp	0.933	0.850	0.411	1e-103
255578461	572	hypothetical protein RCOM_0255070 [Ricin	0.809	0.767	0.421	2e-98
115463567	612	Os05g0376600 [Oryza sativa Japonica Grou	0.904	0.800	0.398	1e-96

>gi|225441345|ref|XP_002274624.1| PREDICTED: uncharacterized protein LOC100245305 [Vitis vinifera]

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 314/624 (50%), Positives = 396/624 (63%), Gaps = 95/624 (15%)

Query: 1   MAPKKTSHVSQSPIPIGNCEVTVEAKKFTCESDPNTLQISISRTAKIKIAVREDL--KSS 58
           MAPKK+  +  S IPIGNCE++++ K  TC+SDPN L IS S+  KIK++V ED+  K+ 
Sbjct: 1   MAPKKS--LQHSSIPIGNCEISIQGKA-TCQSDPNCLLISASKNTKIKVSVMEDVDGKNC 57

Query: 59  NDTTHSKSEEK--------GEEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAA 110
           ND  H + EE         G+EY F+L+NPKD   S SKS LQ+VL IY  ELP MNYAA
Sbjct: 58  NDLRHLRLEESVKAERTSFGDEYFFLLINPKDV-CSQSKSLLQEVLNIYKEELPAMNYAA 116

Query: 111 NTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSI 170
           NTGK SMFLE+CV NGKYC+LLL S+FM+    V+AA+TYQI+PADTQYAE+PL AVSS 
Sbjct: 117 NTGKESMFLERCVSNGKYCSLLLLSNFMEGPGKVIAAVTYQIIPADTQYAEIPLTAVSSN 176

Query: 171 YQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQ------------------- 211
           +Q KG+GRLLY+ELRKRLQ+VGIRTIFCWGDKESEGFW KQ                   
Sbjct: 177 FQSKGIGRLLYIELRKRLQNVGIRTIFCWGDKESEGFWLKQGFVSIAEVDTKGRARRLPI 236

Query: 212 -----------------------DTSADTAVSLKFCFPVKPCEKSS--------LVTVNR 240
                                  D SA+ + ++K  F +KP EKSS        L  +  
Sbjct: 237 RADIRRALCFPGGSTLMVSHLSKDISANFSDAVKKSFSLKPHEKSSSLDVQIQGLGDIGE 296

Query: 241 SLEAER--------------LVMNGCSRDGAKSSGCSRSLEPVHGSGELAAFENVHCSNM 286
           SL+  +              LV +G  +D     G   + E ++   +L  FE V C+NM
Sbjct: 297 SLDTLKAPVQTSLKTFLPHVLVKDGFQKDDDMLDGSFHNHESINVCRDLVPFEEVDCNNM 356

Query: 287 T--VGAAQIGTDTGAKHCSCS-QGTKRR-WEASTSSLKSKKVKGSSCADCHLDSDRSLAS 342
           T  V    +GTD  A +CSCS  G K+R WEAS SSLKSKKVKGS    C LDS+  + S
Sbjct: 357 TNDVRLTGVGTDVEA-NCSCSAHGAKKRVWEASLSSLKSKKVKGSHQIGCQLDSNWDIVS 415

Query: 343 AGG--ETVGLSGC-------KPLREITPSNHVTVDCTGNDAKEDRPVCTTSAAFISKEFQ 393
             G  + V   GC       + L E+ P + ++      + ++ RP+     +F   E Q
Sbjct: 416 GNGKIDNVCFVGCSLGTTRNESLSEVLPRDILSSSYVEKNVEDCRPLSKDQLSF---ELQ 472

Query: 394 SNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCS 453
             G+ FRIMLMNIADD+KK HLTK+I+DLGG+VTSDGS  THVVTGKVRKTLNF TALCS
Sbjct: 473 EKGEGFRIMLMNIADDTKKAHLTKIIKDLGGSVTSDGSACTHVVTGKVRKTLNFCTALCS 532

Query: 454 GAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNI 513
           GAWI+SP+WLKESF EGRFVDES+++L D +Y+ KYR+E+K  +LRAKARP  LL+GY++
Sbjct: 533 GAWILSPSWLKESFHEGRFVDESAFILEDAEYLFKYRAEIKSVILRAKARPRALLKGYSV 592

Query: 514 IMAAHIQPPIKTLSAIVRSAGGNV 537
            +A H+QP ++TLS IVR AGG V
Sbjct: 593 CLAPHVQPAVETLSTIVRFAGGKV 616

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739885|emb|CBI30067.3| unnamed protein product [Vitis vinifera]

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 297/593 (50%), Positives = 371/593 (62%), Gaps = 100/593 (16%)

Query: 17  GNCEVTVEAKKFTCESDPNTLQISISRTAKIKIAVREDLKSSNDTTHSKSEEK--GEEYI 74
           GNCE++++ K  TC+SDPN L IS S+  KIK++    L      T  K+E    G+EY 
Sbjct: 42  GNCEISIQGKA-TCQSDPNCLLISASKNTKIKVS---GLTLFVCFTSVKAERTSFGDEYF 97

Query: 75  FVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLK 134
           F+L+NPKD   S SKS LQ+VL IY  ELP MNYAANTGK SMFLE+CV NGKYC+LLL 
Sbjct: 98  FLLINPKDV-CSQSKSLLQEVLNIYKEELPAMNYAANTGKESMFLERCVSNGKYCSLLLL 156

Query: 135 SSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIR 194
           S+FM+    V+AA+TYQI+PADTQYAE+PL AVSS +Q KG+GRLLY+ELRKRLQ+VGIR
Sbjct: 157 SNFMEGPGKVIAAVTYQIIPADTQYAEIPLTAVSSNFQSKGIGRLLYIELRKRLQNVGIR 216

Query: 195 TIFCWGDKESEGFWHKQ------------------------------------------D 212
           TIFCWGDKESEGFW KQ                                          D
Sbjct: 217 TIFCWGDKESEGFWLKQGFVSIAEVDTKGRARRLPIRADIRRALCFPGGSTLMVSHLSKD 276

Query: 213 TSADTAVSLKFCFPVKPCEKSS--------LVTVNRSLEAER--------------LVMN 250
            SA+ + ++K  F +KP EKSS        L  +  SL+  +              LV +
Sbjct: 277 ISANFSDAVKKSFSLKPHEKSSSLDVQIQGLGDIGESLDTLKAPVQTSLKTFLPHVLVKD 336

Query: 251 GCSRDGAKSSGCSRSLEPVHGSGELAAFENVHCSNMT--VGAAQIGTDTGAKHCSCS-QG 307
           G  +D     G   + E ++   +L  FE V C+NMT  V    +GTD  A +CSCS  G
Sbjct: 337 GFQKDDDMLDGSFHNHESINVCRDLVPFEEVDCNNMTNDVRLTGVGTDVEA-NCSCSAHG 395

Query: 308 TKRR-WEASTSSLKSKKVKGSSCADCHLDSDRSLASAGG--ETVGLSGCKPLREITPSNH 364
            K+R WEAS SSLKSKKVKGS    C LDS+  + S  G  + V   GC           
Sbjct: 396 AKKRVWEASLSSLKSKKVKGSHQIGCQLDSNWDIVSGNGKIDNVCFVGC----------- 444

Query: 365 VTVDCTGNDAKEDRPVCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGG 424
            ++  T N++  +          +S E Q  G+ FRIMLMNIADD+KK HLTK+I+DLGG
Sbjct: 445 -SLGTTRNESLSE----------LSFELQEKGEGFRIMLMNIADDTKKAHLTKIIKDLGG 493

Query: 425 AVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDD 484
           +VTSDGS  THVVTGKVRKTLNF TALCSGAWI+SP+WLKESF EGRFVDES+++L D +
Sbjct: 494 SVTSDGSACTHVVTGKVRKTLNFCTALCSGAWILSPSWLKESFHEGRFVDESAFILEDAE 553

Query: 485 YVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNV 537
           Y+ KYR+E+K  +LRAKARP  LL+GY++ +A H+QP ++TLS IVR AGG V
Sbjct: 554 YLFKYRAEIKSVILRAKARPRALLKGYSVCLAPHVQPAVETLSTIVRFAGGKV 606

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|87241454|gb|ABD33312.1| GCN5-related N-acetyltransferase; BRCT [Medicago truncatula]

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 293/605 (48%), Positives = 371/605 (61%), Gaps = 83/605 (13%)

Query: 1   MAPKKTSHVSQSPIPIGNCEVTVEAKKFTCESDPNTLQISISRTAKIKIAVREDLKSSND 60
           MAPK+      S I IGNCE+TV+A  FTC S  + L IS+ R+  IK++   D+ +++ 
Sbjct: 1   MAPKR----KHSSIFIGNCEITVQASTFTCNSSSSELLISLPRSGNIKVS---DVSANHK 53

Query: 61  TTHSKSEEKGEEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLE 120
                   +  E+ F+LVNPKD +D  +KSYLQ+VLQ+Y  ELP MNYAANTGK+S FLE
Sbjct: 54  NASENFTPEEREHEFMLVNPKDVDD-ITKSYLQEVLQMYMTELPGMNYAANTGKQSKFLE 112

Query: 121 KCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLL 180
           +CV NGKY TLLLKSS   D   V+AAITYQIVPADT+YAE+PLAAV++IYQ KG G++L
Sbjct: 113 RCVTNGKYRTLLLKSSLAGDSGKVLAAITYQIVPADTEYAEIPLAAVNAIYQRKGFGQIL 172

Query: 181 YLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTS-----------------ADTAVSLKF 223
           +LELRKRLQ+VGIR+IFCWGDKESEGFW KQ  S                 AD   +L F
Sbjct: 173 FLELRKRLQNVGIRSIFCWGDKESEGFWLKQGFSSIAQVDTKGRARRFPVKADIRKALCF 232

Query: 224 ------------------------CFPVKPCEKS--SLVTVNRSLE-AERLVMN-GCSRD 255
                                   C P +P + S    +  N  LE ++ L++N   S  
Sbjct: 233 PGGSTLMILHLKKELFDDNANSGKCLPSQPHQNSFTPAIVENEQLEFSDELLINLKSSHR 292

Query: 256 GAKSSGCSRSLEPV---HGSGELAAFENVH---CSNMTVGAAQIGTDTGAKHCSCSQGT- 308
              S     +L  V    G G+L+ F++ +   C N TV +A+   D  A    C+Q   
Sbjct: 293 TDTSQSKPNALVKVGSSQGHGKLSGFDSQNPKNCCNDTVDSARANDDRQANGADCTQEEN 352

Query: 309 --------------KRRWEASTSSLKSKKVKGSSCADCHLDSDRSLASAGGETVGLSGCK 354
                         KR WEAS+SSLKSK+V+GS   DC  DS     S  G     S   
Sbjct: 353 YANAVNCSQSTKVLKRAWEASSSSLKSKRVRGSQFVDCRSDSSWGFVSEAGRANPCSAES 412

Query: 355 PLREITPSNHVTVDCTGNDAKEDRPVCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVH 414
           P  + + + + +  C G+    + P        IS +  S  +CFRIMLMNI DD+KK  
Sbjct: 413 PHCDTSITKN-SEKCIGDHMHLEAP--------ISLKLPSTKQCFRIMLMNITDDAKKTQ 463

Query: 415 LTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVD 474
           LTKVIEDLGG + SDGS++THVVTG+VRKTLNF TALCSGAW+VS +WLKESFREGRFVD
Sbjct: 464 LTKVIEDLGGTIASDGSSTTHVVTGQVRKTLNFCTALCSGAWVVSSSWLKESFREGRFVD 523

Query: 475 ESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAG 534
           E  ++LND DY+LKY+S+L+ +VLRAKA P  L +GYNI +AA++Q P KTLSAIVRSAG
Sbjct: 524 ELPHILNDKDYLLKYKSDLRSAVLRAKACPHSLFKGYNICIAANVQTPAKTLSAIVRSAG 583

Query: 535 GNVSS 539
           GNV S
Sbjct: 584 GNVIS 588

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186507168|ref|NP_181676.2| N-acetyltransferase [Arabidopsis thaliana] gi|330254887|gb|AEC09981.1| N-acetyltransferase [Arabidopsis thaliana]

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 264/580 (45%), Positives = 356/580 (61%), Gaps = 68/580 (11%)

Query: 1   MAPKKTSHVSQSPIPIGNCEVTVEAKKFTCESDPNTLQISISRTAKIKIAVREDLKSSND 60
           MAPK+ S +  S   IG+ EV V+ K FTCES P ++QI   R  ++KI+ ++ + S   
Sbjct: 1   MAPKRASPMQSSLYSIGDYEVAVDGKNFTCESGPKSIQIKFPRNYRVKISEKDKIVS--- 57

Query: 61  TTHSKSEEKGEEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLE 120
                  +  +E +F+L+NP+D ED  +KS+LQ+VL++YS+ELP M YA+NTGK+S FLE
Sbjct: 58  -------DYPKEDMFLLLNPRD-EDDFTKSHLQEVLKLYSKELPDMRYASNTGKQSAFLE 109

Query: 121 KCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLL 180
           +CV  GKYC+L+LKS+   D D ++AAITYQIVPADTQYAE+PLAAV+  +Q KG G+L+
Sbjct: 110 RCVSKGKYCSLVLKSTLGGDSDEILAAITYQIVPADTQYAEIPLAAVTYTHQKKGFGKLV 169

Query: 181 YLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVSLK---------------FCF 225
           Y EL KRL SVGIRTI+CW DKESEGFW KQ       V  K                CF
Sbjct: 170 YEELMKRLHSVGIRTIYCWADKESEGFWLKQGFIKLAEVDHKGKAKGLHIKSNIRKALCF 229

Query: 226 P------------------------VKPCEKSSLVTVNRSLEAERLVMNGCSRDGAKSSG 261
           P                           CE S L   N S       + G S    +S G
Sbjct: 230 PGGSTLMLSHLNKEFISNLEISSSWKYQCEGSPLSARNNSTGP----VTGDSVKLRESFG 285

Query: 262 CSRSLEPVHGSGELAAFENVHC-SNMTVGAAQIGTDTGAKHCSCSQGTKRRWEASTSSLK 320
            S  L+ +  SG  +  +++    N  V + Q  T      CS + G KR WEAS SSL+
Sbjct: 286 ESVYLDCI--SGIRSPMDSITGKENNNVISDQATTADSETKCS-TPGLKRSWEASLSSLQ 342

Query: 321 SKKVKGSSCADCHL-DSDRSLASAGGETVGLSGCKPLREITPSNHVTVDCTGNDAKEDRP 379
           SK+++ ++  +  +  +D + +SA     G S      +IT  +  T+ C  ND ++ R 
Sbjct: 343 SKRIRANNNNNSEIAKTDLAQSSAKQSKDGNSS---QVDITKDSLPTI-CKRNDVEQCR- 397

Query: 380 VCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTG 439
                A  I  E + NG+ +RI+LM+I D++K+  LT+VI  LGG VT DG+TSTH+VTG
Sbjct: 398 ----MATGIDMEARPNGQHYRILLMDICDENKRAWLTEVIRKLGGTVTLDGTTSTHIVTG 453

Query: 440 KVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLR 499
           KVRKTLN  TALCSGAWIVSP+WLKES REGRF +E+S++L+D+DY LKY ++LK +VLR
Sbjct: 454 KVRKTLNLCTALCSGAWIVSPSWLKESVREGRFANEASHILHDEDYQLKYDTDLKSTVLR 513

Query: 500 AKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSS 539
           AKARP  LL+GY+I +  +I+ PIKT SAI++SAGGNV S
Sbjct: 514 AKARPNSLLKGYDICVGPNIELPIKTSSAIIKSAGGNVIS 553

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147836147|emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 262/603 (43%), Positives = 330/603 (54%), Gaps = 122/603 (20%)

Query: 5    KTSHVSQSPIPIGNCEVTVEAKKFTCESDPNTLQISISRTAKIKIA------VREDL--K 56
            +T H++     I   E     K   C +D     I      K ++       V ED+  K
Sbjct: 1334 RTKHINVKFHSIREAEKNSLVKLHYCSTDEQLADIMTKGLPKSRLEFLRLKLVMEDVDGK 1393

Query: 57   SSNDTTHSKSEEK---------GEEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMN 107
            + ND  H + EE          G+EY F+L+NPKD   S SKS LQ+VL IY  ELP MN
Sbjct: 1394 NCNDLRHLRLEESVKAERTSSFGDEYXFLLINPKDV-CSQSKSLLQEVLNIYKEELPAMN 1452

Query: 108  YAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAV 167
            YAANTGK SMFLE+CV NGKYC+LLL S+FM+              P             
Sbjct: 1453 YAANTGKESMFLERCVSNGKYCSLLLLSNFMEG-------------PG------------ 1487

Query: 168  SSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQ---------------- 211
                  KG+G LLY+ELRKRLQ+VGI TIFCWGDKESEGFW KQ                
Sbjct: 1488 ------KGIGHLLYIELRKRLQNVGICTIFCWGDKESEGFWLKQGFVSIAEVDTKGRARR 1541

Query: 212  --------------------------DTSADTAVSLKFCFPVKPCEKSSLVTVNRSLEAE 245
                                      D SA+ + ++K  F +KP EKSS + V    + +
Sbjct: 1542 LPIRADIRRALCFPGGSTLMVSHLSKDISANFSDAVKKSFSLKPHEKSSSLDV----QIQ 1597

Query: 246  RLVMNGCSRDGAKSSGCSRSLEPVHGSGELAAFENVHCSNMTVGAAQIGTDTGAKHCSCS 305
             L   G S D  K+        PV  S      +      +     Q   D    +CSCS
Sbjct: 1598 GLGDIGESLDTLKA--------PVQTS-----LKTFLPHVLVKDGFQKDDDMLDANCSCS 1644

Query: 306  -QGTKRR-WEASTSSLKSKKVKGSSCADCHLDSDRSLASAGG--ETVGLSGC-------K 354
              G K+R WEAS SSLKSKKVKGS    C LDS+  + S  G  + V   GC       +
Sbjct: 1645 AHGAKKRVWEASLSSLKSKKVKGSHQIGCQLDSNWDIVSGNGKIDNVCFVGCSLGTTRNE 1704

Query: 355  PLREITPSNHVTVDCTGNDAKEDRPVCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVH 414
             L E+ P + ++      + ++ RP+     +F   E Q  G+ FRIMLMNIADD+KK H
Sbjct: 1705 SLSEVLPRDILSSSYVEKNVEDCRPLSKDQLSF---ELQEKGEGFRIMLMNIADDTKKAH 1761

Query: 415  LTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVD 474
            LTK+I+DLGG+VTSDGS  THVVTGKVRKTLNF TALCSGAWI+SP+WLKESF EGRFVD
Sbjct: 1762 LTKIIKDLGGSVTSDGSACTHVVTGKVRKTLNFCTALCSGAWILSPSWLKESFHEGRFVD 1821

Query: 475  ESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAG 534
            ES+++L D +Y+ KYR+E+K  +LRAKARP  LL+GY++ +A H+QP ++TLS IVR AG
Sbjct: 1822 ESAFILEDAEYLFKYRAEIKSVILRAKARPRALLKGYSVCLAPHVQPAVETLSTIVRFAG 1881

Query: 535  GNV 537
            G V
Sbjct: 1882 GKV 1884

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086906|ref|XP_002308001.1| predicted protein [Populus trichocarpa] gi|222853977|gb|EEE91524.1| predicted protein [Populus trichocarpa]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/476 (50%), Positives = 284/476 (59%), Gaps = 86/476 (18%)

Query: 144 VVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE 203
           V+AAITYQI+PAD QYAEVPLAAVS++YQ KG G  LY+ELRKRLQ+VG+ TI+CWGDK 
Sbjct: 3   VIAAITYQIIPADMQYAEVPLAAVSAVYQRKGFGHFLYMELRKRLQNVGVHTIYCWGDKG 62

Query: 204 SEGFWHKQD------------------------------------------TSADTAVSL 221
           SEGFW KQ                                            SA    SL
Sbjct: 63  SEGFWVKQGFASIAEVDKKGRPRRLPIKPNIRRALCFPGSSTLMVSHLNEGNSATPEASL 122

Query: 222 KFCFPVKPCEKSSLVTVNRSLEA-------------------------ERLVMNGCSRDG 256
           +FCFP+KPC  SS   V RS E+                         ER   +  S   
Sbjct: 123 QFCFPLKPCNNSS-SAVYRSAESGFIAEDYTTLKSQNQITSRIENSHHERFAKDEFSGAD 181

Query: 257 AKSSGCSRSLEPVHGSGELAAFENVHCSNMTVGA--AQIGTDTGAKHCSCS--QGTKRR- 311
           A  S   +S +     G+LA  E   CS MT  A  A+   D   K C+ S  QGTKRR 
Sbjct: 182 ANPSSLPQSPD----CGDLAPSERGECSKMTTAAELAKTRADADVK-CNYSYIQGTKRRA 236

Query: 312 WEASTSSLKSKKVKGSSCADCHLDSDRSLASAG--------GETVGLSGCKPLREITPSN 363
           WEAS SSLK+KKVKGS   D   DS R   S          G ++G+S      + T  +
Sbjct: 237 WEASLSSLKTKKVKGSHQTDYESDSGRGSDSERFTTDPCFRGCSLGISKNNSFGKATSMD 296

Query: 364 HVTVDCTGNDAKEDRPVCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLG 423
            +T +C  N+ KED+    TS   +SKEFQS G+CFRIMLMNIADD KK HLTKVIE LG
Sbjct: 297 PLTRNCMENNVKEDKSSNRTSEVLVSKEFQSKGECFRIMLMNIADDDKKTHLTKVIETLG 356

Query: 424 GAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDD 483
           GAVT DGS STHVVTGKVR TLNF TAL SGAWIVS  WLKESFR+GRFVDE  Y+L D+
Sbjct: 357 GAVTPDGSVSTHVVTGKVRTTLNFCTALSSGAWIVSSKWLKESFRKGRFVDELPYILYDE 416

Query: 484 DYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSS 539
           +YVLK+++ELKD+VLRA+ARP  LL+GYN+ +A H+QPP +TLSAIV SAGGNV S
Sbjct: 417 EYVLKHKAELKDAVLRARARPQALLKGYNVCIAKHVQPPFQTLSAIVESAGGNVIS 472

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186507172|ref|NP_001118498.1| N-acetyltransferase [Arabidopsis thaliana] gi|330254888|gb|AEC09982.1| N-acetyltransferase [Arabidopsis thaliana]

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 239/507 (47%), Positives = 317/507 (62%), Gaps = 58/507 (11%)

Query: 74  IFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLL 133
           +F+L+NP+D ED  +KS+LQ+VL++YS+ELP M YA+NTGK+S FLE+CV  GKYC+L+L
Sbjct: 1   MFLLLNPRD-EDDFTKSHLQEVLKLYSKELPDMRYASNTGKQSAFLERCVSKGKYCSLVL 59

Query: 134 KSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGI 193
           KS+   D D ++AAITYQIVPADTQYAE+PLAAV+  +Q KG G+L+Y EL KRL SVGI
Sbjct: 60  KSTLGGDSDEILAAITYQIVPADTQYAEIPLAAVTYTHQKKGFGKLVYEELMKRLHSVGI 119

Query: 194 RTIFCWGDKESEGFWHKQDTSADTAVSLK---------------FCFP------------ 226
           RTI+CW DKESEGFW KQ       V  K                CFP            
Sbjct: 120 RTIYCWADKESEGFWLKQGFIKLAEVDHKGKAKGLHIKSNIRKALCFPGGSTLMLSHLNK 179

Query: 227 ------------VKPCEKSSLVTVNRSLEAERLVMNGCSRDGAKSSGCSRSLEPVHGSGE 274
                          CE S L   N S       + G S    +S G S  L+ +  SG 
Sbjct: 180 EFISNLEISSSWKYQCEGSPLSARNNSTGP----VTGDSVKLRESFGESVYLDCI--SGI 233

Query: 275 LAAFENVHC-SNMTVGAAQIGTDTGAKHCSCSQGTKRRWEASTSSLKSKKVKGSSCADCH 333
            +  +++    N  V + Q  T      CS + G KR WEAS SSL+SK+++ ++  +  
Sbjct: 234 RSPMDSITGKENNNVISDQATTADSETKCS-TPGLKRSWEASLSSLQSKRIRANNNNNSE 292

Query: 334 L-DSDRSLASAGGETVGLSGCKPLREITPSNHVTVDCTGNDAKEDRPVCTTSAAFISKEF 392
           +  +D + +SA     G S      +IT  +  T+ C  ND ++ R      A  I  E 
Sbjct: 293 IAKTDLAQSSAKQSKDGNSS---QVDITKDSLPTI-CKRNDVEQCR-----MATGIDMEA 343

Query: 393 QSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALC 452
           + NG+ +RI+LM+I D++K+  LT+VI  LGG VT DG+TSTH+VTGKVRKTLN  TALC
Sbjct: 344 RPNGQHYRILLMDICDENKRAWLTEVIRKLGGTVTLDGTTSTHIVTGKVRKTLNLCTALC 403

Query: 453 SGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYN 512
           SGAWIVSP+WLKES REGRF +E+S++L+D+DY LKY ++LK +VLRAKARP  LL+GY+
Sbjct: 404 SGAWIVSPSWLKESVREGRFANEASHILHDEDYQLKYDTDLKSTVLRAKARPNSLLKGYD 463

Query: 513 IIMAAHIQPPIKTLSAIVRSAGGNVSS 539
           I +  +I+ PIKT SAI++SAGGNV S
Sbjct: 464 ICVGPNIELPIKTSSAIIKSAGGNVIS 490

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326487546|dbj|BAK05445.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 233/566 (41%), Positives = 325/566 (57%), Gaps = 60/566 (10%)

Query: 3   PKKTSHVSQSPIP---IGNCEVTVEAKKFTCESDPNTLQISISRTAKIKIAVREDLKSSN 59
           P+KT   +++P P   IGNC+V +      C S    L IS +R AKI I V        
Sbjct: 4   PRKTKAKAEAPPPALSIGNCKVEIHGSGLRCASTEQNLTISGTRGAKILITV-------- 55

Query: 60  DTTHSKSEEKGEEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFL 119
           D   S S   GE   F+L+NP +A DS +KS LQ+VL++Y +EL TM+YAA+TGK+S FL
Sbjct: 56  DGARSSSGGTGEGSDFILLNPNEA-DSLNKSLLQEVLRLYKKELSTMDYAADTGKKSGFL 114

Query: 120 EKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRL 179
           EKC++NGKY TL+L+SS +   + ++AA++YQIVPADTQYAE+PLAAV+S +Q  G G L
Sbjct: 115 EKCIMNGKYKTLILRSSSLAGPEEIIAAVSYQIVPADTQYAEIPLAAVTSPFQRVGFGHL 174

Query: 180 LYLELRKRLQSVGIRTIFCWGDKESEGFWHKQ--------DTSADTA-------VSLKFC 224
           LY EL +RLQ+VG+ +IFCW DK SEGFW KQ        DT            +    C
Sbjct: 175 LYKELSQRLQNVGVTSIFCWADKVSEGFWLKQGFVSVGEVDTRGKIRRIPVRADIKRALC 234

Query: 225 FP------VKPCEKSSLVTVNRSLEAERLVMNGCSRDGAKSSGCSRSLEPVHGSGELAAF 278
           FP      V   +K    T   SL  ++            S G    ++ V  S E    
Sbjct: 235 FPGSSTLMVTHLKKDLPTTSKNSLREQQTSQLHAVVPDTMSPG---DMDTVVPSCENLFP 291

Query: 279 ENVHCSNMTVGAAQIGTDT--GAKHCSCS--QGTKRRWEASTSSLKSKKVKGSSCADCHL 334
           +   C  ++  A  +  +   G++ CS S  Q  KR +E S+SSLKSK+VK S  AD   
Sbjct: 292 QTTGCHKVSKTAKVVRHEASAGSEGCSLSDQQPKKRTYETSSSSLKSKRVKCSGHADHTQ 351

Query: 335 DSDRSLASAGGETVGLSGCKPLREITPSNHVTVDCTGNDAKEDRPVCTTSAAFISKEFQS 394
           D  ++       ++  +   P  E    N ++ D         RP               
Sbjct: 352 DMRQNDICDKSLSMYSTPLAPSMEFHVDNKISGDAKATTCSNGRP--------------- 396

Query: 395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSG 454
                 +MLMNIAD++KK+ LT+V+E LGG VT +GS+ THVVTGK R+T+NF TAL SG
Sbjct: 397 -----SVMLMNIADETKKMRLTEVVEMLGGVVTCEGSSCTHVVTGKARRTMNFCTALSSG 451

Query: 455 AWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNII 514
           AWIVSPNWLK+SF++G+FV E+ ++L+D++Y +KY+SE++D+V+RAK RP  L  GY   
Sbjct: 452 AWIVSPNWLKQSFKQGKFVGEAEHVLDDEEYKMKYKSEMRDAVMRAKERPCLLFSGYTFC 511

Query: 515 MAAHIQPPIKTLSAIVRSAGGNVSSK 540
           +  HI+P    LS +++S+GG + +K
Sbjct: 512 LTKHIEPSPGVLSPVIKSSGGKIINK 537

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578461|ref|XP_002530095.1| hypothetical protein RCOM_0255070 [Ricinus communis] gi|223530406|gb|EEF32294.1| hypothetical protein RCOM_0255070 [Ricinus communis]

 Score =  365 bits (938), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 232/551 (42%), Positives = 310/551 (56%), Gaps = 112/551 (20%)

Query: 49  IAVREDL--KSSNDTTHSKSEEK----------GEEYIFVLVNPKDAEDSCSKSYLQDVL 96
           + VRE+L  +  +D   S++EEK          GEEY+F LVN K + DSC   YLQ   
Sbjct: 15  LIVREELNRRCCDDIEQSRAEEKILEVGKNLPLGEEYMFSLVNSKFS-DSC---YLQ--- 67

Query: 97  QIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPAD 156
             Y+ E+P    +++  ++ +        G +  L L  S       +  A+   +   +
Sbjct: 68  --YA-EIPIAAVSSDYQRKVI--------GSHSLLFLAHS------AIKLALFSALYSTE 110

Query: 157 TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHK------ 210
            +YA              G GRLLY ELRKRL +VG+R I+CWGDKESEGFWHK      
Sbjct: 111 EKYA-------------YGFGRLLYKELRKRLWNVGVRAIYCWGDKESEGFWHKLGFQSI 157

Query: 211 ------------------------------------QDTSADTAVSLKFCFPVKPCEKSS 234
                                               +D SA+ +   KF FP++P + SS
Sbjct: 158 AEVDKKGRAGRLPIKADVRRALCFPGGSVLMVSHLGEDISANDSELQKFHFPLRPQKLSS 217

Query: 235 LVTVNRSLEAERLVMNGCSRDGAKSSGCSRSLEPVHGSGELAAFENVHCSNMTVGAA--Q 292
            + ++  L  +   +  C      +  C +          L  F  + CS  + GA   +
Sbjct: 218 AIDISVHLGKDYNTLGFCW-----NGDCEK----------LDTFGGLGCSKKSSGAGLEK 262

Query: 293 IGTDTGAKHCSCSQGTKRR--WEASTSSLKSKKVKGSSCADC--HLDSDRSLASAGGETV 348
           I  D  AK CSC    KRR  WEAS SSLKSKKVKGS   DC  +  SDR  +     ++
Sbjct: 263 IEADIDAKFCSCYTQNKRRRVWEASLSSLKSKKVKGSHQIDCTEYSGSDRMESCFNECSL 322

Query: 349 GLSGCKPLREITPSNHVTVDCTGNDAKEDRPVCTTSAAFISKEFQSNGKCFRIMLMNIAD 408
            +S      E++ ++ +T +C  N+AKE R +   S A +S+  QS G   +IMLMNIAD
Sbjct: 323 AISKGNSFLEVSDTDPLTSNCMENNAKEGRSINMGSEAIVSRGLQSMGDNIQIMLMNIAD 382

Query: 409 DSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFR 468
           ++KK+HLTKVIE LGG VTSDGS STHVVTGK+RKTLNF TALCSGAWIVS +WLKESF+
Sbjct: 383 EAKKIHLTKVIESLGGTVTSDGSISTHVVTGKIRKTLNFCTALCSGAWIVSSSWLKESFQ 442

Query: 469 EGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSA 528
            GRFVDE  ++L+D++Y+LKYR+ LKD++LRAKARP  LLRGY+I ++AHIQPP+KTLSA
Sbjct: 443 NGRFVDEWPHVLHDEEYMLKYRTGLKDAILRAKARPKALLRGYDICISAHIQPPVKTLSA 502

Query: 529 IVRSAGGNVSS 539
           IV+SAGGN+ S
Sbjct: 503 IVKSAGGNIVS 513

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115463567|ref|NP_001055383.1| Os05g0376600 [Oryza sativa Japonica Group] gi|51038084|gb|AAT93887.1| unknown protein [Oryza sativa Japonica Group] gi|113578934|dbj|BAF17297.1| Os05g0376600 [Oryza sativa Japonica Group] gi|215706889|dbj|BAG93349.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 225/564 (39%), Positives = 315/564 (55%), Gaps = 74/564 (13%)

Query: 16  IGNCEVTVEAKKFTCES---DPNTLQISISRTAKIKIAVREDLKSSNDTTHSKSEEKGEE 72
           IGNC+V +      C+S   +   L IS  R AKI ++V            +KS   G+ 
Sbjct: 26  IGNCKVEIHGSSLRCQSTEQEEEELTISGPRGAKIVVSV----------DGAKSSSVGDG 75

Query: 73  YIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLL 132
           + F+L++P D  +  +K+ LQ+VL +Y +ELPTM+YAANTG++S FLEKCV NGKY TL+
Sbjct: 76  FDFILLSPSDVNER-NKALLQEVLLLYKQELPTMDYAANTGRKSGFLEKCVTNGKYKTLV 134

Query: 133 LKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG 192
           L S+   ++  V AA++YQ+VPADTQYAE+PLA V   YQ  G+G+LLY EL +RL++VG
Sbjct: 135 LSSTAGYEE--VTAALSYQLVPADTQYAEIPLAVVRPPYQRVGIGQLLYKELSQRLRNVG 192

Query: 193 IRTIFCWGDKESEGFWHKQDTSADTAVSLK---------------FCFPVK--------- 228
           + TIFCW D  SEGFW KQ   +   V  K                CFP           
Sbjct: 193 VTTIFCWADNVSEGFWLKQGFESVGEVDTKGKICRIPVRADIKRALCFPGGSMLMVSHLK 252

Query: 229 --PCEKSSLVTVNRSLEAERLVMNGCSRD--GAKSSGCSRSLEPVHGSGELAAFENVHCS 284
             P  + SL++  ++ +      +  S    G  +  C + L            + V C 
Sbjct: 253 DLPAPQKSLLSSQQTYQFHTFAPDSISPSDTGTSTPSCEKLLP-----------QTVACH 301

Query: 285 NMTVGAAQIGTDT--GAKHCSCS--QGTKRRWEASTSSLKSKKVKGSSCADCHLDSDRSL 340
            ++  AA    +   G   CS S  Q  KR  E S+SSLKSK+V+ S  +D H D +++ 
Sbjct: 302 KVSKTAAVEKNEDFHGTGGCSFSDQQENKRTHETSSSSLKSKRVRCSQHSDHHQDMNQN- 360

Query: 341 ASAGGETVGLSGCKPLR-EITPSNHVTVDCTGNDAKEDRPVCTTSAAF---ISKEFQSNG 396
                E  G    KPL    TP +  +V    N+      V    +           SNG
Sbjct: 361 -----EICG----KPLSISNTPIHENSVHLMPNELSNPSMVGHVKSKISGDAKANISSNG 411

Query: 397 KCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAW 456
               +MLMNIAD++KK  L +V+E LGG VT +G++ THV+TGKVR T+NF  ALCSGAW
Sbjct: 412 SP-SVMLMNIADETKKTQLIEVVEMLGGVVTCEGNSCTHVITGKVRMTMNFCIALCSGAW 470

Query: 457 IVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMA 516
           IVSP WLKESF++G+FV E+ Y+  DD++ +KY+SEL+D+V+RAK RP  L  GY   + 
Sbjct: 471 IVSPKWLKESFKKGKFVGEAEYVFQDDEFKVKYKSELRDAVVRAKERPCSLFSGYTFCLT 530

Query: 517 AHIQPPIKTLSAIVRSAGGNVSSK 540
            +IQP +  LS I++S+GG + +K
Sbjct: 531 KNIQPSVNVLSRIIKSSGGKLINK 554

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	542
TAIR|locus:2060535	612	AT2G41450 [Arabidopsis thalian	0.369	0.326	0.554	7.9e-112
ZFIN|ZDB-GENE-041010-214	1122	paxip1 "PAX interacting (with	0.225	0.108	0.411	4.5e-15
UNIPROTKB|A0JNA8	984	PAXIP1 "PAX-interacting protei	0.215	0.118	0.378	7.4e-13
UNIPROTKB|F1P482	1062	PAXIP1 "Uncharacterized protei	0.215	0.110	0.378	8.2e-13
UNIPROTKB|Q6ZW49	1069	PAXIP1 "PAX-interacting protei	0.215	0.109	0.378	8.3e-13
UNIPROTKB|G3MZP9	1195	PAXIP1 "PAX-interacting protei	0.215	0.097	0.378	9.6e-13
RGD|1307547	994	Paxip1 "PAX interacting (with	0.215	0.117	0.361	7.2e-12
MGI|MGI:1890430	1056	Paxip1 "PAX interacting (with	0.215	0.110	0.361	1.7e-11
RGD|1559468	1279	Mdc1 "mediator of DNA damage c	0.210	0.089	0.344	1.2e-10
UNIPROTKB|Q5U2M8	1279	Mdc1 "Mediator of DNA damage c	0.210	0.089	0.344	1.2e-10

TAIR|locus:2060535 AT2G41450 [Arabidopsis thaliana (taxid:3702)]

 Score = 590 (212.7 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
 Identities = 117/211 (55%), Positives = 155/211 (73%)

Query:     1 MAPKKTSHVSQSPIPIGNCEVTVEAKKFTCESDPNTLQISISRTAKIKIAVREDLKSSND 60
             MAPK+ S +  S   IG+ EV V+ K FTCES P ++QI   R  ++KI+ ++ + S   
Sbjct:     1 MAPKRASPMQSSLYSIGDYEVAVDGKNFTCESGPKSIQIKFPRNYRVKISEKDKIVSD-- 58

Query:    61 TTHSKSEEKGEEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLE 120
               + K +      +F+L+NP+D ED  +KS+LQ+VL++YS+ELP M YA+NTGK+S FLE
Sbjct:    59 --YPKED------MFLLLNPRD-EDDFTKSHLQEVLKLYSKELPDMRYASNTGKQSAFLE 109

Query:   121 KCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLL 180
             +CV  GKYC+L+LKS+   D D ++AAITYQIVPADTQYAE+PLAAV+  +Q KG G+L+
Sbjct:   110 RCVSKGKYCSLVLKSTLGGDSDEILAAITYQIVPADTQYAEIPLAAVTYTHQKKGFGKLV 169

Query:   181 YLELRKRLQSVGIRTIFCWGDKESEGFWHKQ 211
             Y EL KRL SVGIRTI+CW DKESEGFW KQ
Sbjct:   170 YEELMKRLHSVGIRTIYCWADKESEGFWLKQ 200

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008080 "N-acetyltransferase activity" evidence=IEA;ISS

ZFIN|ZDB-GENE-041010-214 paxip1 "PAX interacting (with transcription-activation domain) protein 1" [Danio rerio (taxid:7955)]

 Score = 226 (84.6 bits), Expect = 4.5e-15, P = 4.5e-15
 Identities = 51/124 (41%), Positives = 71/124 (57%)

Query:   417 KVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDES 476
             K + DLGG V       TH+V  KV +T+ FLTA+     IV+P WL+ES++  +FVDE 
Sbjct:   937 KKLYDLGGEVADSTQKCTHLVANKVTRTVKFLTAISVVKHIVTPEWLEESWKSQKFVDEQ 996

Query:   477 SYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGN 536
             SYML D +  + +   L++S+ RA A P  L +G    +   I P + T+  IV SA G 
Sbjct:   997 SYMLRDAEAEVLFSFSLEESLKRAHAAP--LFKGKYFYITPGICPSLSTMKLIVESAAGK 1054

Query:   537 VSSK 540
             V SK
Sbjct:  1055 VLSK 1058

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

UNIPROTKB|A0JNA8 PAXIP1 "PAX-interacting protein 1" [Bos taurus (taxid:9913)]

 Score = 205 (77.2 bits), Expect = 7.4e-13, P = 7.4e-13
 Identities = 45/119 (37%), Positives = 67/119 (56%)

Query:   422 LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
             LGG V       TH++  KV +T+ FLTA+     IV+P WL+E F+  +FVDE +Y+L 
Sbjct:   804 LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQKFVDEQNYLLR 863

Query:   482 DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK 540
             D +  + +   L++S+ RA A P  L +     +   I P + T+ AIV  AGG V S+
Sbjct:   864 DAEAEVLFSFSLEESLRRAHASP--LFKAKYFYITPGICPSLSTMKAIVECAGGKVLSR 920

GO:0016363 "nuclear matrix" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006310 "DNA recombination" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

UNIPROTKB|F1P482 PAXIP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 205 (77.2 bits), Expect = 8.2e-13, P = 8.2e-13
 Identities = 45/119 (37%), Positives = 68/119 (57%)

Query:   422 LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
             LGG V       TH++  KV +T+ FLTA+     IV+P WL+E F+  +FVDE +++L 
Sbjct:   898 LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQKFVDEQNFVLR 957

Query:   482 DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK 540
             D +  + +   L++S+ RA+  P  L +G    +   I P + T+ AIV  AGG V SK
Sbjct:   958 DAEAEVLFCFSLEESLKRAQVAP--LFKGKYFYITPGICPSLSTMKAIVECAGGKVLSK 1014

GO:0000416 "positive regulation of histone H3-K36 methylation" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=IEA

GO:0031398 "positive regulation of protein ubiquitination" evidence=IEA

GO:0035066 "positive regulation of histone acetylation" evidence=IEA

GO:0035097 "histone methyltransferase complex" evidence=IEA

GO:0043542 "endothelial cell migration" evidence=IEA

GO:0045830 "positive regulation of isotype switching" evidence=IEA

GO:0051568 "histone H3-K4 methylation" evidence=IEA

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=IEA

GO:0060261 "positive regulation of transcription initiation from RNA polymerase II promoter" evidence=IEA

GO:0060612 "adipose tissue development" evidence=IEA

GO:0060717 "chorion development" evidence=IEA

UNIPROTKB|Q6ZW49 PAXIP1 "PAX-interacting protein 1" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 8.3e-13, P = 8.3e-13
 Identities = 45/119 (37%), Positives = 66/119 (55%)

Query:   422 LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
             LGG V       TH++  KV +T+ FLTA+     IV+P WL+E FR  +F+DE +Y+L 
Sbjct:   889 LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRCQKFIDEQNYILR 948

Query:   482 DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK 540
             D +  + +   L++S+ RA   P  L +     +   I P + T+ AIV  AGG V SK
Sbjct:   949 DAEAEVLFSFSLEESLKRAHVSP--LFKAKYFYITPGICPSLSTMKAIVECAGGKVLSK 1005

GO:0006281 "DNA repair" evidence=IEA

GO:0006310 "DNA recombination" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0043542 "endothelial cell migration" evidence=IEA

GO:0060612 "adipose tissue development" evidence=IEA

GO:0060717 "chorion development" evidence=IEA

GO:0016363 "nuclear matrix" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IDA

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0000416 "positive regulation of histone H3-K36 methylation" evidence=ISS

GO:0031398 "positive regulation of protein ubiquitination" evidence=ISS

GO:0035066 "positive regulation of histone acetylation" evidence=ISS

GO:0045830 "positive regulation of isotype switching" evidence=ISS

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=ISS

GO:0060261 "positive regulation of transcription initiation from RNA polymerase II promoter" evidence=ISS;IMP

GO:0035097 "histone methyltransferase complex" evidence=IDA

GO:0051568 "histone H3-K4 methylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|G3MZP9 PAXIP1 "PAX-interacting protein 1" [Bos taurus (taxid:9913)]

 Score = 205 (77.2 bits), Expect = 9.6e-13, P = 9.6e-13
 Identities = 45/119 (37%), Positives = 67/119 (56%)

Query:   422 LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
             LGG V       TH++  KV +T+ FLTA+     IV+P WL+E F+  +FVDE +Y+L 
Sbjct:  1015 LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQKFVDEQNYLLR 1074

Query:   482 DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK 540
             D +  + +   L++S+ RA A P  L +     +   I P + T+ AIV  AGG V S+
Sbjct:  1075 DAEAEVLFSFSLEESLRRAHASP--LFKAKYFYITPGICPSLSTMKAIVECAGGKVLSR 1131

GO:0060717 "chorion development" evidence=IEA

GO:0060612 "adipose tissue development" evidence=IEA

GO:0060261 "positive regulation of transcription initiation from RNA polymerase II promoter" evidence=IEA

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=IEA

GO:0051568 "histone H3-K4 methylation" evidence=IEA

GO:0045830 "positive regulation of isotype switching" evidence=IEA

GO:0043542 "endothelial cell migration" evidence=IEA

GO:0035097 "histone methyltransferase complex" evidence=IEA

GO:0035066 "positive regulation of histone acetylation" evidence=IEA

GO:0031398 "positive regulation of protein ubiquitination" evidence=IEA

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0000416 "positive regulation of histone H3-K36 methylation" evidence=IEA

RGD|1307547 Paxip1 "PAX interacting (with transcription-activation domain) protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 196 (74.1 bits), Expect = 7.2e-12, P = 7.2e-12
 Identities = 43/119 (36%), Positives = 66/119 (55%)

Query:   422 LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
             LGG V       TH++  KV +T+ FLTA+     IV+P+WL+E F+   F+DE +Y+L 
Sbjct:   814 LGGEVAESTKKCTHLIASKVTRTVKFLTAISVVKHIVTPDWLEECFKRQMFIDEQNYILR 873

Query:   482 DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK 540
             D +  + +   L++S+ RA   P  L +     +   I P + T+ AIV  AGG V +K
Sbjct:   874 DAEAEVLFSFSLEESLKRAHVSP--LFKTKYFYITPGICPSLATMKAIVECAGGKVLAK 930

GO:0000416 "positive regulation of histone H3-K36 methylation" evidence=ISO

GO:0001570 "vasculogenesis" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0006974 "response to DNA damage stimulus" evidence=ISO

GO:0010212 "response to ionizing radiation" evidence=ISO

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=ISO

GO:0031398 "positive regulation of protein ubiquitination" evidence=ISO

GO:0035066 "positive regulation of histone acetylation" evidence=ISO

GO:0035097 "histone methyltransferase complex" evidence=ISO

GO:0043542 "endothelial cell migration" evidence=ISO

GO:0045830 "positive regulation of isotype switching" evidence=ISO

GO:0051568 "histone H3-K4 methylation" evidence=ISO

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=ISO

GO:0060261 "positive regulation of transcription initiation from RNA polymerase II promoter" evidence=ISO

GO:0060612 "adipose tissue development" evidence=ISO

GO:0060717 "chorion development" evidence=ISO

MGI|MGI:1890430 Paxip1 "PAX interacting (with transcription-activation domain) protein 1" [Mus musculus (taxid:10090)]

 Score = 193 (73.0 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 43/119 (36%), Positives = 66/119 (55%)

Query:   422 LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
             LGG V       TH++  KV +T+ FLTA+     IV+P+WL+E F+   F+DE +Y+L 
Sbjct:   876 LGGEVAECTKKCTHLIASKVTRTVKFLTAISVVKHIVTPDWLEECFKRQTFIDEQNYILR 935

Query:   482 DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK 540
             D +  + +   L++S+ RA   P  L +     +   I P + T+ AIV  AGG V +K
Sbjct:   936 DAEAEVLFSFSLEESLKRAHVSP--LFKTKYFYITPGICPSLATMKAIVECAGGKVLAK 992

GO:0000416 "positive regulation of histone H3-K36 methylation" evidence=IMP

GO:0001570 "vasculogenesis" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0006281 "DNA repair" evidence=IEA

GO:0006310 "DNA recombination" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IDA

GO:0010212 "response to ionizing radiation" evidence=ISO

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=ISO

GO:0031398 "positive regulation of protein ubiquitination" evidence=IMP

GO:0035066 "positive regulation of histone acetylation" evidence=IMP

GO:0035097 "histone methyltransferase complex" evidence=ISO;IDA

GO:0043542 "endothelial cell migration" evidence=IMP

GO:0045830 "positive regulation of isotype switching" evidence=IMP

GO:0051568 "histone H3-K4 methylation" evidence=ISO

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=IMP

GO:0060261 "positive regulation of transcription initiation from RNA polymerase II promoter" evidence=ISO;IMP

GO:0060612 "adipose tissue development" evidence=IMP

GO:0060717 "chorion development" evidence=IMP

RGD|1559468 Mdc1 "mediator of DNA damage checkpoint 1" [Rattus norvegicus (taxid:10116)]

 Score = 186 (70.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 40/116 (34%), Positives = 66/116 (56%)

Query:   422 LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
             LGG++ S  + ++H+VT ++R+T+ FL A+  G  I+S NWL +S + G F+    Y++ 
Sbjct:  1105 LGGSLASSVNEASHLVTDRIRRTVKFLCAVGKGIPILSLNWLYQSRKAGCFLPPDDYLVT 1164

Query:   482 DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNV 537
             D +    +   L+DS+ RA+ R   LL  Y I +   +QPP   +  I+   GG V
Sbjct:  1165 DPEQEKNFSFSLRDSLSRARERR--LLEDYEIHVTPGVQPPPPQMGEIISCCGGTV 1218

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005694 "chromosome" evidence=IEA;ISO;ISS

GO:0005925 "focal adhesion" evidence=IEA;ISO

GO:0006281 "DNA repair" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA;ISO

GO:0070975 "FHA domain binding" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|Q5U2M8 Mdc1 "Mediator of DNA damage checkpoint protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 186 (70.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 40/116 (34%), Positives = 66/116 (56%)

Query:   422 LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
             LGG++ S  + ++H+VT ++R+T+ FL A+  G  I+S NWL +S + G F+    Y++ 
Sbjct:  1105 LGGSLASSVNEASHLVTDRIRRTVKFLCAVGKGIPILSLNWLYQSRKAGCFLPPDDYLVT 1164

Query:   482 DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNV 537
             D +    +   L+DS+ RA+ R   LL  Y I +   +QPP   +  I+   GG V
Sbjct:  1165 DPEQEKNFSFSLRDSLSRARERR--LLEDYEIHVTPGVQPPPPQMGEIISCCGGTV 1218

GO:0005925 "focal adhesion" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0070975 "FHA domain binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00025326001 SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (830 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	542
cd00027	72	cd00027, BRCT, Breast Cancer Suppressor Protein (B	2e-10
smart00292	78	smart00292, BRCT, breast cancer carboxy-terminal d	3e-09
pfam00533	77	pfam00533, BRCT, BRCA1 C Terminus (BRCT) domain	1e-06
cd04301	65	cd04301, NAT_SF, N-Acyltransferase superfamily: Va	4e-05
pfam00583	80	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT	1e-04
TIGR01575	131	TIGR01575, rimI, ribosomal-protein-alanine acetylt	4e-04

>gnl|CDD|237994 cd00027, BRCT, Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain

 Score = 56.2 bits (136), Expect = 2e-10
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 399 FRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTS-THVVTGKVRKTLNFLTALCSGAWI 457
              ++       ++  L ++IE LGG VTS  S   THV+ G        L A+  G  I
Sbjct: 2   LTFVITGDLPSEERDELKELIEKLGGKVTSSVSKKTTHVIVGSDAGPKKLLKAIKLGIPI 61

Query: 458 VSPNWLKESFR 468
           V+P WL +  +
Sbjct: 62  VTPEWLLDCLK 72

The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks. Length = 72

>gnl|CDD|214602 smart00292, BRCT, breast cancer carboxy-terminal domain

 Score = 53.5 bits (129), Expect = 3e-09
 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 399 FRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGS--TSTHVVTGKV-RKTLNFLTALCSGA 455
               +    D  ++  L ++IE LGG VTS  S  T+THV+ G      L  L A+  G 
Sbjct: 7   KTFYITGSFDKEERDELKELIEALGGKVTSSLSSKTTTHVIVGSPEGGKLELLKAIALGI 66

Query: 456 WIVSPNWLKESF 467
            IV   WL +  
Sbjct: 67  PIVKEEWLLDCL 78

Length = 78

>gnl|CDD|215978 pfam00533, BRCT, BRCA1 C Terminus (BRCT) domain

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 408 DDSKKVHLTKVIEDLGGAVTSDGS-TSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKES 466
           D  ++  L ++IE LGG VT   S  +THV+ G+   TL  L A+  G  IV+  WL + 
Sbjct: 17  DSLEREELEELIEKLGGKVTDSLSKKTTHVIVGENAGTLKLLKAIALGIPIVTEEWLLDC 76

Query: 467 F 467
            
Sbjct: 77  I 77

The BRCT domain is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage. The BRCT domain of XRCC1 forms a homodimer in the crystal structure. This suggests that pairs of BRCT domains associate as homo- or heterodimers. BRCT domains are often found as tandem-repeat pairs. Structures of the BRCA1 BRCT domains revealed a basis for a widely utilised head-to-tail BRCT-BRCT oligomerisation mode. This conserved tandem BRCT architecture facilitates formation of the canonical BRCT phospho-peptide interaction cleft at a groove between the BRCT domains. Disease associated missense and nonsense mutations in the BRCA1 BRCT domains disrupt peptide binding by directly occluding this peptide binding groove, or by disrupting key conserved BRCT core folding determinants. Length = 77

>gnl|CDD|173926 cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 139 DDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC 198
           +DD  +V   +     +    A +   AV   Y+ KG+G  L     +  +  G + +  
Sbjct: 5   EDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64

Query: 199 W 199
            
Sbjct: 65  E 65

NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included. Length = 65

>gnl|CDD|216007 pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 138 MDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIF 197
            ++D  +V   +  I+  +   AE+   AV   Y+ KG+G  L   L +  + +G++ I 
Sbjct: 1   AEEDGELVGFASLSIIDEEGNVAEIEGLAVDPEYRGKGIGTALLEALEEYARELGLKRIE 60

Query: 198 CWGDKE---SEGFWHKQ 211
               ++   +   + K 
Sbjct: 61  LEVLEDNEAAIALYEKL 77

This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins. Length = 80

>gnl|CDD|233477 TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 137 FMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTI 196
                  VV     QIV  +   A +   AV   YQ +G+GR L  EL    +  G+  I
Sbjct: 35  LARIGGKVVGYAGVQIVLDE---AHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEI 91

Query: 197 F 197
           F
Sbjct: 92  F 92

Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database [Protein synthesis, Ribosomal proteins: synthesis and modification]. Length = 131

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	542
KOG2043	896	consensus Signaling protein SWIFT and related BRCT	99.84
COG1246	153	ArgA N-acetylglutamate synthase and related acetyl	99.58
KOG4362	684	consensus Transcriptional regulator BRCA1 [Replica	99.48
PRK07757	152	acetyltransferase; Provisional	99.4
PF00583	83	Acetyltransf_1: Acetyltransferase (GNAT) family; I	99.33
PF13508	79	Acetyltransf_7: Acetyltransferase (GNAT) domain; P	99.21
PF00533	78	BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IP	99.18
PRK07922	169	N-acetylglutamate synthase; Validated	99.15
PTZ00330	147	acetyltransferase; Provisional	99.1
cd00027	72	BRCT Breast Cancer Suppressor Protein (BRCA1), car	99.09
PLN02825	515	amino-acid N-acetyltransferase	99.08
KOG1472	720	consensus Histone acetyltransferase SAGA/ADA, cata	99.08
PRK10146	144	aminoalkylphosphonic acid N-acetyltransferase; Pro	99.08
TIGR01890	429	N-Ac-Glu-synth amino-acid N-acetyltransferase. Thi	99.05
PRK10314	153	putative acyltransferase; Provisional	99.02
PLN02706	150	glucosamine 6-phosphate N-acetyltransferase	99.02
PRK13688	156	hypothetical protein; Provisional	99.02
PF13673	117	Acetyltransf_10: Acetyltransferase (GNAT) domain;	98.98
TIGR02406	157	ectoine_EctA L-2,4-diaminobutyric acid acetyltrans	98.96
PF12738	63	PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2W	98.95
PRK12308	614	bifunctional argininosuccinate lyase/N-acetylgluta	98.92
smart00292	80	BRCT breast cancer carboxy-terminal domain.	98.91
PHA00673	154	acetyltransferase domain containing protein	98.9
TIGR02382	191	wecD_rffC TDP-D-fucosamine acetyltransferase. This	98.9
PRK03624	140	putative acetyltransferase; Provisional	98.89
cd02169	297	Citrate_lyase_ligase Citrate lyase ligase. Citrate	98.89
PF13527	127	Acetyltransf_9: Acetyltransferase (GNAT) domain; P	98.88
TIGR01575	131	rimI ribosomal-protein-alanine acetyltransferase.	98.88
PRK05279	441	N-acetylglutamate synthase; Validated	98.87
TIGR03827	266	GNAT_ablB putative beta-lysine N-acetyltransferase	98.84
PRK09491	146	rimI ribosomal-protein-alanine N-acetyltransferase	98.84
PRK10140	162	putative acetyltransferase YhhY; Provisional	98.81
PRK10975	194	TDP-fucosamine acetyltransferase; Provisional	98.8
COG0456	177	RimI Acetyltransferases [General function predicti	98.77
PF13420	155	Acetyltransf_4: Acetyltransferase (GNAT) domain; P	98.72
TIGR00124	332	cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP	98.66
TIGR03448	292	mycothiol_MshD mycothiol biosynthesis acetyltransf	98.66
COG3153	171	Predicted acetyltransferase [General function pred	98.59
PRK09831	147	putative acyltransferase; Provisional	98.59
PRK15130	186	spermidine N1-acetyltransferase; Provisional	98.51
TIGR03103	547	trio_acet_GNAT GNAT-family acetyltransferase TIGR0	98.47
KOG3139	165	consensus N-acetyltransferase [General function pr	98.44
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	98.43
PF08445	86	FR47: FR47-like protein; InterPro: IPR013653 Prote	98.43
KOG3396	150	consensus Glucosamine-phosphate N-acetyltransferas	98.41
PRK10151	179	ribosomal-protein-L7/L12-serine acetyltransferase;	98.4
PF13302	142	Acetyltransf_3: Acetyltransferase (GNAT) domain; P	98.39
cd04301	65	NAT_SF N-Acyltransferase superfamily: Various enzy	98.38
TIGR01211	522	ELP3 histone acetyltransferase, ELP3 family. The S	98.35
PRK10809	194	ribosomal-protein-S5-alanine N-acetyltransferase;	98.35
PRK10514	145	putative acetyltransferase; Provisional	98.34
KOG3216	163	consensus Diamine acetyltransferase [Amino acid tr	98.34
PHA01807	153	hypothetical protein	98.33
KOG3548	1176	consensus DNA damage checkpoint protein RHP9/CRB2/	98.32
TIGR03448	292	mycothiol_MshD mycothiol biosynthesis acetyltransf	98.3
TIGR03585	156	PseH pseudaminic acid biosynthesis N-acetyl transf	98.3
KOG3397	225	consensus Acetyltransferases [General function pre	98.29
PRK01346	411	hypothetical protein; Provisional	98.26
PRK10562	145	putative acetyltransferase; Provisional	98.23
KOG3226	508	consensus DNA repair protein [Replication, recombi	98.18
KOG2488	202	consensus Acetyltransferase (GNAT) domain-containi	98.13
PF14542	78	Acetyltransf_CG: GCN5-related N-acetyl-transferase	98.05
PF13523	152	Acetyltransf_8: Acetyltransferase (GNAT) domain; P	97.99
COG3393	268	Predicted acetyltransferase [General function pred	97.89
KOG1929	811	consensus Nucleotide excision repair factor NEF2,	97.87
PLN03122	815	Poly [ADP-ribose] polymerase; Provisional	97.86
PF13718	196	GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2Z	97.81
COG2153	155	ElaA Predicted acyltransferase [General function p	97.81
COG1247	169	Sortase and related acyltransferases [Cell envelop	97.8
COG1670	187	RimL Acetyltransferases, including N-acetylases of	97.75
PLN03123	981	poly [ADP-ribose] polymerase; Provisional	97.65
COG3053	352	CitC Citrate lyase synthetase [Energy production a	97.55
KOG1929	811	consensus Nucleotide excision repair factor NEF2,	97.54
COG0454	156	WecD Histone acetyltransferase HPA2 and related ac	97.39
COG2388	99	Predicted acetyltransferase [General function pred	97.3
KOG3138	187	consensus Predicted N-acetyltransferase [General f	97.24
KOG3235	193	consensus Subunit of the major N alpha-acetyltrans	96.91
COG1444	758	Predicted P-loop ATPase fused to an acetyltransfer	96.91
KOG3524	850	consensus Predicted guanine nucleotide exchange fa	96.88
KOG3234	173	consensus Acetyltransferase, (GNAT) family [Genera	96.83
PF12568	128	DUF3749: Acetyltransferase (GNAT) domain; InterPro	96.48
COG3981	174	Predicted acetyltransferase [General function pred	96.11
COG4552	389	Eis Predicted acetyltransferase involved in intrac	96.05
PRK06195	309	DNA polymerase III subunit epsilon; Validated	95.83
KOG0966	881	consensus ATP-dependent DNA ligase IV [Replication	95.82
PRK06063	313	DNA polymerase III subunit epsilon; Provisional	95.62
PRK14351	689	ligA NAD-dependent DNA ligase LigA; Provisional	95.44
COG1243	515	ELP3 Histone acetyltransferase [Transcription / Ch	95.43
PF12746	265	GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S	95.38
PF00533	78	BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IP	95.36
PRK07956	665	ligA NAD-dependent DNA ligase LigA; Validated	95.16
cd04264	99	DUF619-NAGS DUF619 domain of various N-acetylgluta	94.74
PF06852	181	DUF1248: Protein of unknown function (DUF1248); In	94.69
TIGR00575	652	dnlj DNA ligase, NAD-dependent. The member of this	94.69
PRK14350	669	ligA NAD-dependent DNA ligase LigA; Provisional	94.58
KOG4144	190	consensus Arylalkylamine N-acetyltransferase [Gene	94.53
COG0272	667	Lig NAD-dependent DNA ligase (contains BRCT domain	94.25
smart00292	80	BRCT breast cancer carboxy-terminal domain.	94.08
PF08444	89	Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acylt	93.91
COG5628	143	Predicted acetyltransferase [General function pred	93.83
COG3818	167	Predicted acetyltransferase, GNAT superfamily [Gen	93.65
KOG2481	570	consensus Protein required for normal rRNA process	93.55
KOG4135	185	consensus Predicted phosphoglucosamine acetyltrans	93.01
KOG0323	635	consensus TFIIF-interacting CTD phosphatases, incl	92.77
KOG2535	554	consensus RNA polymerase II elongator complex, sub	92.73
cd04265	99	DUF619-NAGS-U DUF619 domain of various N-acetylglu	92.65
PF01233	162	NMT: Myristoyl-CoA:protein N-myristoyltransferase,	91.99
COG5163	591	NOP7 Protein required for biogenesis of the 60S ri	91.81
TIGR03694	241	exosort_acyl putative PEP-CTERM/exosortase system-	91.03
PF13480	142	Acetyltransf_6: Acetyltransferase (GNAT) domain	89.97
cd00027	72	BRCT Breast Cancer Suppressor Protein (BRCA1), car	88.8
PRK13834	207	putative autoinducer synthesis protein; Provisiona	87.72
COG5275	276	BRCT domain type II [General function prediction o	87.66
KOG2036	1011	consensus Predicted P-loop ATPase fused to an acet	85.02
PF04377	128	ATE_C: Arginine-tRNA-protein transferase, C termin	84.06

>KOG2043 consensus Signaling protein SWIFT and related BRCT domain proteins [Transcription; Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]

Probab=99.84  E-value=1.7e-20  Score=214.49  Aligned_cols=383  Identities=22%  Similarity=0.239  Sum_probs=247.3

Q ss_pred             EEEEEEeeecc-CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc---
Q 009150          144 VVAAITYQIVP-ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV---  219 (542)
Q Consensus       144 VIg~i~~~i~~-~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~---  219 (542)
                      .-+.|++..++ .+.++......++..+-+-+|+++.............+.+.+..+..+..+.||.++++....+.   
T Consensus       343 ~~~~it~~~~~~~~~~~~~~~i~~~~~~~~~~~~ss~~~~~~qs~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~s~~~~e  422 (896)
T KOG2043|consen  343 NMAAITLQNFPDDQTQGNAQPIENIPSDPPQKKYSSMVTYSPQSPNEKKDSRMVQPFPIPENVNSLLKLDGIKFSEFDPE  422 (896)
T ss_pred             cccccccccccccCcCcCccccccccCCcccccccCcceeccccccccCCccccccCCcccccccccccccccccccCCC
Confidence            68899999999 56689999999999999889999999888888888889999999999999999999999877654   


Q ss_pred             -------------------cc--cccCCCCCCCceeEEEEecccch--hhhcccc----ccCCCC-----------C--C
Q 009150          220 -------------------SL--KFCFPVKPCEKSSLVTVNRSLEA--ERLVMNG----CSRDGA-----------K--S  259 (542)
Q Consensus       220 -------------------~~--~~~~~~~~c~ea~lm~l~~~~~~--~~~~~~~----~~~~~~-----------~--~  259 (542)
                                         .+  ..+|...    ..+|--+.+.+.  .+.+++.    ....+.           .  .
T Consensus       423 ~~~~~d~~~~~~~~~iks~~~e~e~s~~~~----s~~~~~hv~~~~~s~tq~~~s~~~~~~~~~~~~~~~i~~~~~~~~~  498 (896)
T KOG2043|consen  423 SPEKLDKLRKASEEVIKSNSGELENSFDSK----SELFGKHVIDEHGSNTQMEDSVSDQKRESEVFNDVKITSYPAPPKQ  498 (896)
T ss_pred             cccccchhhhcccccccccchhhhhcccCC----ccccccccccCCCCccccccchhhhhhhccccccccccccCCCccc
Confidence                               11  3344442    333321111100  0111110    000000           0  0


Q ss_pred             CCCCCCCCCc-CCCcccccc---------------ccccccccc--ccccccccCCCCceeecCCCccchhhcccccccc
Q 009150          260 SGCSRSLEPV-HGSGELAAF---------------ENVHCSNMT--VGAAQIGTDTGAKHCSCSQGTKRRWEASTSSLKS  321 (542)
Q Consensus       260 ~~~~~~~~~~-~~~~~~~~~---------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~kr~~~~s~~~l~s  321 (542)
                      ...+...... -.-.+..++               ....++++.  ....|..  ++..--.+..|.++.|.+|+++..|
T Consensus       499 ~~~~~~~~~~~id~k~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~--~d~~t~~~~~~~~~~~~~s~~~~~s  576 (896)
T KOG2043|consen  499 NNERQPVKGDDIDLKGEESSTESVRQLLAKSKREKLTSKSNRKEKETIASQIE--ADVVTPESQWGLSTKNLASSSDETS  576 (896)
T ss_pred             cccccccccccccccccCCCCcchhhhhccCcccccccccccccccccchhhh--hcccCcccccCcccccccccccccc
Confidence            0000000000 000011111               111112222  2233333  3333333348889999999999999


Q ss_pred             ccccCCCCCcccccccccccc-cCCccccCCCCCCCCC-CCCCCCccccccCCCccCCCcccccccccccccccCCC---
Q 009150          322 KKVKGSSCADCHLDSDRSLAS-AGGETVGLSGCKPLRE-ITPSNHVTVDCTGNDAKEDRPVCTTSAAFISKEFQSNG---  396 (542)
Q Consensus       322 k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~k~~~~~~~~~~~~~~~is~~~~s~~---  396 (542)
                      |+++.++.---+..+..+.+. ..++......-....+ .+...   ..++...-+... ..+-..+++..+..+..   
T Consensus       577 ~~~~~~~~~~~~~n~~~~~qi~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~sr~~~t~~~~e~~s~~~~~  652 (896)
T KOG2043|consen  577 KDERKNFKRLTRSNSDNDAQLNVSSKSSKPKTSQSSSQGESCPD---VPTICVRTNYSG-ASRLASTPAASELRSSSANL  652 (896)
T ss_pred             hhhhccccccccccccchhhhhccccccCcccccccccCCCCCC---cccccccccccc-cchhccccchhhhhhhhhcc
Confidence            999997766555544433332 1111111111000000 00000   011111100000 00001111111111111   


Q ss_pred             -----CCeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCC
Q 009150          397 -----KCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGR  471 (542)
Q Consensus       397 -----k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk  471 (542)
                           ..+.++|++..+..   .++..++.|||.+......+||+|+.+++||.|||+||++|+|||+++||.+|++.|.
T Consensus       653 ~e~~~~r~~~lfs~~~~~~---~~k~~~k~lg~s~~ss~~e~Th~i~~rirRT~k~Leai~~G~~ivT~~wL~s~~k~g~  729 (896)
T KOG2043|consen  653 NELASKRIEVLFSDKNDGK---NYKLAKKFLGGSVASSDSEATHFIADRIRRTLKFLEAISSGKPLVTPQWLVSSLKSGE  729 (896)
T ss_pred             chhhccceeeeeeeccCch---hhhhHHhhccceeecccccceeeeehhhhccHHHHhhhccCCcccchHHHHHHhhccc
Confidence                 12689999998754   4889999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          472 FVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       472 ~LdEe~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      |+||++|.+.|.+.+++|++++..++.||+.+  ++|.|+.|++++.+.++...+..||+.+||.|+..+
T Consensus       730 ~~dek~yil~D~ekEk~~gf~l~ssl~RAr~~--plL~g~~v~vtp~v~p~~~~v~eiie~~ggnvv~~~  797 (896)
T KOG2043|consen  730 KLDEKPYILHDEEKEKEFGFRLKSSLLRARAD--PLLEGINVHVTPSVTPSPKTVVEIIEISGGNVVSDS  797 (896)
T ss_pred             cccCccccccCHHHHhccCcchhhHHHHhhcc--hhhcCceEEeccccccCcchhHHHHhhcCcceeccc
Confidence            99999999999999999999999999999875  799999999999999999999999999999998653

>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]

Probab=99.58  E-value=1.3e-15  Score=142.43  Aligned_cols=121  Identities=17%  Similarity=0.184  Sum_probs=112.3

Q ss_pred             chhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeee-ccCCCceeEeeee
Q 009150           87 CSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQI-VPADTQYAEVPLA  165 (542)
Q Consensus        87 ~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i-~~~d~~~aeI~~~  165 (542)
                      .|+|...|+..|..    ++..++.+|.|   ++|. .+..|+.|.+|.+.+ .+|.||||+.++. .+++  .+||..+
T Consensus         3 iR~A~~~Di~~I~~----Li~~~~~~gil---~~rs-~~~le~~i~dF~i~E-~~g~viGC~aL~~~~~~~--~gE~~~l   71 (153)
T COG1246           3 IRKARISDIPAILE----LIRPLELQGIL---LRRS-REQLEEEIDDFTIIE-RDGKVIGCAALHPVLEED--LGELRSL   71 (153)
T ss_pred             eeeccccchHHHHH----HHHHHhhcccc---chhh-HHHHHHHHhhheeee-eCCcEEEEEeecccCccC--eeeEEEE
Confidence            47899999999999    99999999999   9999 889999999999987 5899999999985 4455  9999999


Q ss_pred             eeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          166 AVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       166 AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      ||+|+|||+|+|..|++++++.+++.||+++|++|. .+.+||.+.||+..+..
T Consensus        72 aV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt-~~~~~F~~~GF~~vd~~  124 (153)
T COG1246          72 AVHPDYRGSGRGERLLERLLADARELGIKELFVLTT-RSPEFFAERGFTRVDKD  124 (153)
T ss_pred             EECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec-ccHHHHHHcCCeECccc
Confidence            999999999999999999999999999999999995 59999999999999863

>KOG4362 consensus Transcriptional regulator BRCA1 [Replication, recombination and repair; Transcription]

Probab=99.48  E-value=7.8e-14  Score=154.85  Aligned_cols=143  Identities=23%  Similarity=0.375  Sum_probs=112.1

Q ss_pred             cccCCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECC-----CCCcHHHHHHHhcCCeEeCHHHHH
Q 009150          391 EFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGK-----VRKTLNFLTALCSGAWIVSPNWLK  464 (542)
Q Consensus       391 ~~~s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k-----~~RTlKfL~AIA~G~wIVSpsWL~  464 (542)
                      ......++.+.+.||+++++ ++.+.++..+   ++...+ +.+||+|+..     +.||+|||.+|++|+||++..|+.
T Consensus       471 s~~~~~kk~~~~~s~l~p~e-k~~v~~~a~~---t~~k~~~~~~thvi~~~~~~g~c~rTlk~~~gil~gkwi~~~~w~~  546 (684)
T KOG4362|consen  471 STHRFKKKLVLLVSGLTPSE-KQLVEKFAVD---TISKFWIEPVTHVIASTDLEGACLRTLKVLMGILRGKWILSYDWVL  546 (684)
T ss_pred             cccCcccceeeeeccCCcch-HHHHHHHHHH---HHhhccCCCceeeeeecccccchhhhHHHHHHhhcCceeeeHHHHH
Confidence            34445667888999999988 4556666555   555555 8999999964     799999999999999999999999


Q ss_pred             HHHHcCCCCCCCCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEe-CCCCCCHHHHHHHHHhCCCEEec
Q 009150          465 ESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMA-AHIQPPIKTLSAIVRSAGGNVSS  539 (542)
Q Consensus       465 dSlk~Gk~LdEe~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is-~~v~p~~~~L~~LIeagGG~V~~  539 (542)
                      +|++.++|++|++|||...--...-+.  .....+|..+..+||+|..||+- +...++.+.|+.++.++||+++.
T Consensus       547 ~s~k~~~~~~eepfEl~~d~~~~~~~~--~~~~~~a~s~~~kLf~gl~~~~~g~fs~~p~~~l~~l~~~~gg~~l~  620 (684)
T KOG4362|consen  547 ASLKLRKWVSEEPFELQIDVPGAREGP--KEKRLRAESYKPKLFEGLKFYFVGDFSNPPKEQLQELVHLAGGTILQ  620 (684)
T ss_pred             HHHHhcCCCCCCCeeEeecccCcccCc--ccccccccccCcchhcCCcceeecccccCcHHHHHHHHhhcCcceee
Confidence            999999999999999986532111111  11224555667899999999885 55677899999999999999875

>PRK07757 acetyltransferase; Provisional

Probab=99.40  E-value=6.3e-13  Score=120.63  Aligned_cols=92  Identities=22%  Similarity=0.371  Sum_probs=81.4

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      +++++||.+.+...+++  .++|..++|+|+|||+|+|+.|+.++.+.++..|+.++.+.+.  +..||+|+||+.....
T Consensus        48 ~~~~lvG~~~l~~~~~~--~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~--~~~~Y~k~GF~~~~~~  123 (152)
T PRK07757         48 EEGEIVGCCALHILWED--LAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY--QPEFFEKLGFREVDKE  123 (152)
T ss_pred             ECCEEEEEEEEEeccCC--ceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHHCCCEEcccc
Confidence            45799999988776544  7889999999999999999999999999999999999987776  6789999999998875


Q ss_pred             ----------cccccCCCCCCCceeEEE
Q 009150          220 ----------SLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       220 ----------~~~~~~~~~~c~ea~lm~  237 (542)
                                ..|+.+|.  |+|+.|+.
T Consensus       124 ~~~~~~~~~~~~~~~~~~--~~~~~~~~  149 (152)
T PRK07757        124 ALPQKVWADCIKCPKFPN--CDEIAMIK  149 (152)
T ss_pred             cCChhHHhcCccCCCCCC--cchhhhhh
Confidence                      88899998  99988765

>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2

Probab=99.33  E-value=5.2e-12  Score=102.49  Aligned_cols=75  Identities=20%  Similarity=0.289  Sum_probs=69.3

Q ss_pred             CCCcEEEEEEeeeccCC---CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVPAD---TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d---~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqGF  213 (542)
                      ++|+|||++.+.+.+.+   ..+++|..++|+++|||+|||+.|++++++.+++.|+..+.+.+...   +..||+|+||
T Consensus         3 ~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k~Gf   82 (83)
T PF00583_consen    3 EDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEKLGF   82 (83)
T ss_dssp             ETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHHTTE
T ss_pred             CCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHHcCC
Confidence            57899999999999865   47999999999999999999999999999999999999998888774   7799999999


Q ss_pred             c
Q 009150          214 S  214 (542)
Q Consensus       214 ~  214 (542)
                      +
T Consensus        83 ~   83 (83)
T PF00583_consen   83 E   83 (83)
T ss_dssp             E
T ss_pred             C
Confidence            5

3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....

>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A

Probab=99.21  E-value=2.9e-11  Score=99.17  Aligned_cols=70  Identities=26%  Similarity=0.379  Sum_probs=59.7

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~  215 (542)
                      +++++||++.+..   ..++++|..+||+|++||+|||+.|++++++.+++   ..+++.+.+.+..||+|+||++
T Consensus        10 ~~~~ivG~~~~~~---~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~~~~~~~fY~~~GF~~   79 (79)
T PF13508_consen   10 DDGEIVGFIRLWP---NEDFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFTNPAAIKFYEKLGFEE   79 (79)
T ss_dssp             ETTEEEEEEEEEE---TTTEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEEEHHHHHHHHHTTEEE
T ss_pred             ECCEEEEEEEEEE---cCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEEcHHHHHHHHHCcCCC
Confidence            5789999998733   23489999999999999999999999999888844   6678888889999999999974

...

>PF00533 BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IPR001357 The BRCT domain (after the C_terminal domain of a breast cancer susceptibility protein) is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage [], for example as found in the breast cancer DNA-repair protein BRCA1

Probab=99.18  E-value=1.2e-10  Score=94.26  Aligned_cols=71  Identities=25%  Similarity=0.514  Sum_probs=64.1

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCC-CCcHHHHHHHhcCCeEeCHHHHHHHH
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKV-RKTLNFLTALCSGAWIVSPNWLKESF  467 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~-~RTlKfL~AIA~G~wIVSpsWL~dSl  467 (542)
                      -+++.|+++++...+ ++.+.++|+++||++.... +.+||||++.. .++.|++.|.+.|++||+++||.+|+
T Consensus         6 F~g~~f~i~~~~~~~-~~~l~~~i~~~GG~v~~~~~~~~thvI~~~~~~~~~k~~~~~~~~i~iV~~~Wi~~ci   78 (78)
T PF00533_consen    6 FEGCTFCISGFDSDE-REELEQLIKKHGGTVSNSFSKKTTHVIVGNPNKRTKKYKAAIANGIPIVSPDWIEDCI   78 (78)
T ss_dssp             TTTEEEEESSTSSSH-HHHHHHHHHHTTEEEESSSSTTSSEEEESSSHCCCHHHHHHHHTTSEEEETHHHHHHH
T ss_pred             CCCEEEEEccCCCCC-HHHHHHHHHHcCCEEEeecccCcEEEEeCCCCCccHHHHHHHHCCCeEecHHHHHHhC
Confidence            456888897777665 7889999999999998887 89999999987 89999999999999999999999996

The domain is an approximately 100 amino acid tandem repeat, which appears to act as a phospho-protein binding domain []. A chitin biosynthesis protein from yeast also seems to belong to this group. ; GO: 0005622 intracellular; PDB: 3L46_A 3AL3_A 3AL2_A 1WF6_A 3II6_X 2NTE_B 3FA2_A 2R1Z_A 2COK_A 2K7F_A ....

>PRK07922 N-acetylglutamate synthase; Validated

Probab=99.15  E-value=6.3e-11  Score=111.80  Aligned_cols=85  Identities=19%  Similarity=0.228  Sum_probs=72.6

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      +++++||.+.+...+.+  +++|..++|+|+|||+|||+.|++++++.+++.|+.++++.+.  +..||+|+||...+..
T Consensus        53 ~~~~iiG~~~~~~~~~~--~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~--~~~fY~k~GF~~~~~~  128 (169)
T PRK07922         53 LDGEVVGCGALHVMWED--LAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTF--EVEFFARHGFVEIDGT  128 (169)
T ss_pred             cCCcEEEEEEEeecCCC--ceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec--cHHHHHHCCCEECccc
Confidence            56789998887766644  7899999999999999999999999999999999999988776  6899999999988643


Q ss_pred             --------cccccCCCC
Q 009150          220 --------SLKFCFPVK  228 (542)
Q Consensus       220 --------~~~~~~~~~  228 (542)
                              ..+.+|+.|
T Consensus       129 ~~~~~~~~~~~~~~~~~  145 (169)
T PRK07922        129 PVTPEVYAELLRSYDEG  145 (169)
T ss_pred             cCChHHHHHHHHhhHHH
Confidence                    345666665

>PTZ00330 acetyltransferase; Provisional

Probab=99.10  E-value=2.8e-10  Score=101.96  Aligned_cols=79  Identities=18%  Similarity=0.237  Sum_probs=69.7

Q ss_pred             CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~  215 (542)
                      +++++||.+.+...+    .+..+++|..+.|+|+|||+|||+.|++++.+.+++.|+..+.+.++..|..||+|+||..
T Consensus        59 ~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~n~~a~~~y~k~GF~~  138 (147)
T PTZ00330         59 PTQRIVGTASLFVEPKFTRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDCTEDMVAFYKKLGFRA  138 (147)
T ss_pred             CCCEEEEEEEEEeccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecChHHHHHHHHCCCEE
Confidence            567999999877654    2324688999999999999999999999999999999999999998888999999999998


Q ss_pred             ccc
Q 009150          216 DTA  218 (542)
Q Consensus       216 ~~~  218 (542)
                      ...
T Consensus       139 ~~~  141 (147)
T PTZ00330        139 CER  141 (147)
T ss_pred             ece
Confidence            764

>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain

Probab=99.09  E-value=4.9e-10  Score=86.85  Aligned_cols=70  Identities=30%  Similarity=0.508  Sum_probs=61.0

Q ss_pred             eEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHH
Q 009150          399 FRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFR  468 (542)
Q Consensus       399 ~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk  468 (542)
                      ..|+++|..+...+..+++.++.+||.+.... ..+||||++......++..|...|++||+++||.+|++
T Consensus         2 ~~~~i~g~~~~~~~~~l~~~i~~~Gg~v~~~~~~~~thvI~~~~~~~~~~~~~~~~~~~iV~~~Wi~~~~~   72 (72)
T cd00027           2 LTFVITGDLPSEERDELKELIEKLGGKVTSSVSKKTTHVIVGSDAGPKKLLKAIKLGIPIVTPEWLLDCLK   72 (72)
T ss_pred             CEEEEEecCCCcCHHHHHHHHHHcCCEEeccccCCceEEEECCCCCchHHHHHHHcCCeEecHHHHHHHhC
Confidence            57889998744447889999999999999988 59999999987666668999999999999999999974

The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.

>PLN02825 amino-acid N-acetyltransferase

Probab=99.08  E-value=2.4e-10  Score=125.72  Aligned_cols=139  Identities=13%  Similarity=0.130  Sum_probs=100.4

Q ss_pred             cCCCceEEeeCCCCccccchhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEE
Q 009150           69 KGEEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAI  148 (542)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i  148 (542)
                      |..+-.=.+|-.... ...|++..+|+..|..    .+....+.|..   ..|. .+.....+-.|.+.+ .||+|||++
T Consensus       353 ft~dg~gt~i~~~~~-e~IR~At~eDi~~I~~----Li~~lee~g~l---v~rs-~e~le~ei~~f~V~e-~Dg~IVG~a  422 (515)
T PLN02825        353 FTRDGMGTMIASDMY-EGTRMARVEDLAGIRQ----IIRPLEESGIL---VRRT-DEELLRALDSFVVVE-REGSIIACA  422 (515)
T ss_pred             hccCCceeEeccChH-hhheeCCHHHHHHHHH----HHHHHHHcCCC---cCCC-HHHHHhcCCcEEEEE-ECCEEEEEE
Confidence            444444466767777 7789999999998888    55444444432   1111 111111111123322 578999999


Q ss_pred             EeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          149 TYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       149 ~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      .+..++ +...+||..+||+|+|||+|+|++|++++++++++.|++++++.+. .+..||+|+||...+..
T Consensus       423 al~~~~-~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Lltt-~a~~fY~k~GF~~~~~~  491 (515)
T PLN02825        423 ALFPFF-EEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLTT-RTADWFVRRGFSECSIE  491 (515)
T ss_pred             EEEeec-CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeC-cHHHHHHHCCCEEeChh
Confidence            887665 4467899999999999999999999999999999999999999874 68899999999987743

>KOG1472 consensus Histone acetyltransferase SAGA/ADA, catalytic subunit PCAF/GCN5 and related proteins [Chromatin structure and dynamics; Transcription]

Probab=99.08  E-value=1.9e-11  Score=137.11  Aligned_cols=122  Identities=21%  Similarity=0.314  Sum_probs=109.3

Q ss_pred             chhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeee
Q 009150           87 CSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAA  166 (542)
Q Consensus        87 ~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~A  166 (542)
                      .-+..|-+..++|..|||.|+        .+||.|+|+|+.|.+.-....+.    -+||+|+++.+| .+.|.+|.++|
T Consensus       386 ~~~~~li~~~~~f~~qL~emp--------kEyi~rlv~d~~h~~~~~~~d~~----g~vggi~~r~f~-~k~f~eivf~a  452 (720)
T KOG1472|consen  386 EIPIELIGLRNEFSKQLPEMP--------KEYISRLVFDTSHHVMARIKDNE----GVVGGICFRPFP-EKGFTEIVFCA  452 (720)
T ss_pred             cchhhhccchhHHHhhcccch--------HHHHHhhccccccccceeecccc----ccccccccCcCc-ccCCcceeecc
Confidence            345667778888999999999        99999999999999998886432    299999999999 55799999999


Q ss_pred             eccCccccChHHHHHHHHHHHHHHcC-CcEEEEEccccchhhhhhcCccccccccc
Q 009150          167 VSSIYQHKGVGRLLYLELRKRLQSVG-IRTIFCWGDKESEGFWHKQDTSADTAVSL  221 (542)
Q Consensus       167 V~~~~QgkGiG~~Lv~~l~~~lk~~G-I~~I~l~a~~~A~~Fw~KqGF~~~~~~~~  221 (542)
                      |+.+.|.+|+|+-+|++++++.+... |.+..++|+.+|.+||+||||+..-....
T Consensus       453 v~~~eqv~g~g~hlmnhlkd~~~~~~~i~~~ltyad~~aigyfkkqgfs~ei~~~~  508 (720)
T KOG1472|consen  453 VTTDEQVKGSGTHLMNHLKDYVRSSSTIDYALTYADEGAIGYFKKQGFSKEIKFEK  508 (720)
T ss_pred             ccCcccccccCcCchhhHHHHhhccchHHHHHHhhhhcccccccCccchhhccccc
Confidence            99999999999999999999999988 99999999999999999999998765533

>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional

Probab=99.08  E-value=2.4e-10  Score=102.03  Aligned_cols=78  Identities=14%  Similarity=0.083  Sum_probs=66.7

Q ss_pred             CCCcEEEEEEeeeccC---CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~---d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      +++++||.+.+...+.   ...+++|..++|+|++||+|||+.|++++++.++..|+..+.+.+..   .|..||+|+||
T Consensus        54 ~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~~~Gf  133 (144)
T PRK10146         54 LDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGY  133 (144)
T ss_pred             ECCEEEEEEEEEecccccccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHcCC
Confidence            4678999998876542   11357899999999999999999999999999999999999887654   59999999999


Q ss_pred             cccc
Q 009150          214 SADT  217 (542)
Q Consensus       214 ~~~~  217 (542)
                      ....
T Consensus       134 ~~~~  137 (144)
T PRK10146        134 EQSH  137 (144)
T ss_pred             chhh
Confidence            8764

>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase

Probab=99.05  E-value=4.5e-10  Score=120.70  Aligned_cols=78  Identities=18%  Similarity=0.323  Sum_probs=69.2

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      +++++||++.+...+ +..+++|..++|+|+|||+|+|++||+++++++++.|+.++++++. ++..||+|+||+..+..
T Consensus       329 ~dg~iVG~~~~~~~~-~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~~-~a~~fY~k~GF~~~g~~  406 (429)
T TIGR01890       329 HDGNIIGCAALYPYA-EEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTT-RTGHWFRERGFQTASVD  406 (429)
T ss_pred             ECCEEEEEEEEEecC-CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeec-chHHHHHHCCCEECChh
Confidence            467999999877665 4468999999999999999999999999999999999999988765 57899999999999764

This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.

>PRK10314 putative acyltransferase; Provisional

Probab=99.02  E-value=5.6e-10  Score=104.02  Aligned_cols=80  Identities=15%  Similarity=0.106  Sum_probs=68.3

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccccchhhhhhcCcccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDKESEGFWHKQDTSADTA  218 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~~A~~Fw~KqGF~~~~~  218 (542)
                      +++++||.+.+.....+...++|.-+||+++|||+|||+.||+++++.++.. +...+.|.+...+.+||+|.||..+++
T Consensus        55 ~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k~GF~~~g~  134 (153)
T PRK10314         55 KNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSFGFIPVTE  134 (153)
T ss_pred             ECCEEEEEEEEecCCCCCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHHHHHHCCCEECCC
Confidence            3678999986654433334689999999999999999999999999999885 788899999878899999999999887


Q ss_pred             c
Q 009150          219 V  219 (542)
Q Consensus       219 ~  219 (542)
                      .
T Consensus       135 ~  135 (153)
T PRK10314        135 V  135 (153)
T ss_pred             c
Confidence            4

>PLN02706 glucosamine 6-phosphate N-acetyltransferase

Probab=99.02  E-value=1.1e-09  Score=99.24  Aligned_cols=78  Identities=15%  Similarity=0.184  Sum_probs=67.1

Q ss_pred             CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~  215 (542)
                      ++++|||.+.+.+.+    ...++++|..++|+|+|||+|||+.|++++++++++.|+.+|.+.+......||+|+||..
T Consensus        62 ~~~~ivG~~~~~~~~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~~y~k~GF~~  141 (150)
T PLN02706         62 ASGRIIATGSVFVERKFIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKAFYEKCGYVR  141 (150)
T ss_pred             CCCcEEEEEEEEEEeecccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHHHHHHCcCEE
Confidence            367899988775432    1225778889999999999999999999999999999999999998887789999999997


Q ss_pred             cc
Q 009150          216 DT  217 (542)
Q Consensus       216 ~~  217 (542)
                      .+
T Consensus       142 ~g  143 (150)
T PLN02706        142 KE  143 (150)
T ss_pred             eh
Confidence            65

>PRK13688 hypothetical protein; Provisional

Probab=99.02  E-value=1e-09  Score=103.37  Aligned_cols=122  Identities=19%  Similarity=0.193  Sum_probs=82.3

Q ss_pred             CCceEEeeCCCCccccch---hhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEE
Q 009150           71 EEYIFVLVNPKDAEDSCS---KSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAA  147 (542)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~---~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~  147 (542)
                      |+-..+|+|.+.+ ..+.   .+..+|+.+|+.                  |..-+|.....+.. + ... +++++||+
T Consensus         2 ~~~~~~~~~~~~~-~~~~~~~~~~~~dl~~l~~------------------l~~~~f~~~~~~~~-~-~~~-~~~~~VG~   59 (156)
T PRK13688          2 PEVKRLLINYKTL-EEFKKFREFGNQELSMLEE------------------LQANIIENDSESPF-Y-GIY-YGDSLVAR   59 (156)
T ss_pred             CceeEEEecchhH-HHHHHHHHhcHHHHHHHHh------------------hhhhEeecCCCCCE-E-EEE-ECCEEEEE
Confidence            4556789999999 5554   455566666655                  43333432222211 1 111 36789998


Q ss_pred             EEeeec--------cCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          148 ITYQIV--------PADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       148 i~~~i~--------~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      +.+...        ..+..+++|..++|+|+|||||||++|++++.    +.++. +.+.+.+.|..||+|+||+..+..
T Consensus        60 ~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~----~~~~~-~~~~~~~~a~~FY~k~GF~~~~~~  134 (156)
T PRK13688         60 MSLYKKGGVEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAK----SFQLP-IKTIARNKSKDFWLKLGFTPVEYK  134 (156)
T ss_pred             EEEEecCCcccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHH----HhCCe-EEEEeccchHHHHHhCCCEEeEEe
Confidence            765322        23457889999999999999999999998654    34554 555666779999999999988765

>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A

Probab=98.98  E-value=8.8e-10  Score=94.79  Aligned_cols=67  Identities=24%  Similarity=0.390  Sum_probs=57.5

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF  213 (542)
                      ++++|||.+.+.  + +   ++|.+++|+|+|||+|||++|++.+++.++. |+..+.+.++..|..||+|+||
T Consensus        51 ~~~~ivG~~~~~--~-~---~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~~~~~a~~~y~~~GF  117 (117)
T PF13673_consen   51 EGGEIVGFAWLE--P-D---GEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVEANERARRFYRKLGF  117 (117)
T ss_dssp             ETTEEEEEEEEE--T-C---EEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEEC-HHHHHHHHHTT-
T ss_pred             ECCEEEEEEEEc--C-C---CeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEEeCHHHHHHHHhCCC
Confidence            467999998875  3 3   3399999999999999999999999999988 9999999988889999999999

>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase

Probab=98.96  E-value=4.1e-09  Score=98.02  Aligned_cols=89  Identities=17%  Similarity=0.131  Sum_probs=73.4

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      +++++||.+.+...+......+|..++|+|++||+|||+.|+.+++++++..++.+|.+.+..   .|..||+|+||+..
T Consensus        47 ~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k~G~~~~  126 (157)
T TIGR02406        47 EGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRALFKALARRRG  126 (157)
T ss_pred             CCCeEEEEEEEEecCCCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHHhCcccC
Confidence            467899988776666555678899999999999999999999999999999999999877644   48999999999887


Q ss_pred             ccccccc-----cCCCC
Q 009150          217 TAVSLKF-----CFPVK  228 (542)
Q Consensus       217 ~~~~~~~-----~~~~~  228 (542)
                      ...+..+     -||+|
T Consensus       127 ~~~~~~~~~~~~~~~~~  143 (157)
T TIGR02406       127 VHLIEEPFFDGELFPGG  143 (157)
T ss_pred             CCeEeecccccccCccC
Confidence            7664333     35665

This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.

>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A

Probab=98.95  E-value=8.4e-10  Score=87.89  Aligned_cols=62  Identities=27%  Similarity=0.454  Sum_probs=52.5

Q ss_pred             eEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHH
Q 009150          399 FRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNW  462 (542)
Q Consensus       399 ~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsW  462 (542)
                      ++|++||+.+.+ +..+.+.++.|||.+..+. ..+||||+... .+.||-.|...|++||+|+|
T Consensus         1 ~~i~~sg~~~~~-~~~l~~~i~~~Gg~~~~~lt~~~THLI~~~~-~~~K~~~A~~~gi~vV~~~W   63 (63)
T PF12738_consen    1 VVICFSGFSGKE-RSQLRKLIEALGGKYSKDLTKKTTHLICSSP-EGKKYRKAKEWGIPVVSPDW   63 (63)
T ss_dssp             -EEEEEEB-TTT-CCHHHHHHHCTT-EEESSSSTT-SEEEEES---HHHHHHHHHCTSEEEEHHH
T ss_pred             CEEEECCCCHHH-HHHHHHHHHHCCCEEeccccCCceEEEEeCC-CcHHHHHHHHCCCcEECCCC
Confidence            478999999877 6889999999999999998 89999999664 59999999999999999999

>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional

Probab=98.92  E-value=2.2e-09  Score=120.47  Aligned_cols=76  Identities=21%  Similarity=0.274  Sum_probs=66.8

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      ++|+|||++.+.....  .+++|..++|+|+|||||||+.|++++++.++..|+..+.+.+.  +..||+|+||+..+..
T Consensus       510 ~~g~IVG~~~l~~~~~--~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~~--a~~FYek~GF~~~~~~  585 (614)
T PRK12308        510 HHGEVTGCASLYIYDS--GLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLTR--VPEFFMKQGFSPTSKS  585 (614)
T ss_pred             ECCEEEEEEEEEEcCC--CeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEeeC--cHHHHHHCCCEECCcc
Confidence            4678999998766543  37889999999999999999999999999999999999988764  6899999999988855

>smart00292 BRCT breast cancer carboxy-terminal domain

Probab=98.91  E-value=6.2e-09  Score=82.45  Aligned_cols=73  Identities=34%  Similarity=0.546  Sum_probs=60.6

Q ss_pred             CCeEEEEcc-cCChhhHHHHHHHHHHcCcEEeccCC--ceeEEEECCCCCc-HHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150          397 KCFRIMLMN-IADDSKKVHLTKVIEDLGGAVTSDGS--TSTHVVTGKVRKT-LNFLTALCSGAWIVSPNWLKESFREG  470 (542)
Q Consensus       397 k~~rVlfSG-~~de~kk~~L~kiIkkLGG~V~~d~~--~~THLIt~k~~RT-lKfL~AIA~G~wIVSpsWL~dSlk~G  470 (542)
                      ++.+++++| +.... +..+.+.+..+||++.....  .+||+|+...... .++..|...+++||+++||.+|++.+
T Consensus         4 ~g~~~~~~g~~~~~~-~~~l~~~i~~~Gg~~~~~~~~~~~thvi~~~~~~~~~~~~~~~~~~~~iV~~~Wi~~~~~~~   80 (80)
T smart00292        4 KGKVFVITGKFDKNE-RDELKELIEALGGKVTSSLSSKTTTHVIVGSPEGGKLELLLAIALGIPIVTEDWLLDCLKAG   80 (80)
T ss_pred             CCeEEEEeCCCCCcc-HHHHHHHHHHcCCEEecccCccceeEEEEcCCCCccHHHHHHHHcCCCCccHHHHHHHHHCc
Confidence            457899999 54444 78899999999999999884  8999999874333 33788999999999999999999864

>PHA00673 acetyltransferase domain containing protein

Probab=98.90  E-value=6e-09  Score=98.43  Aligned_cols=79  Identities=10%  Similarity=0.108  Sum_probs=72.0

Q ss_pred             CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc--cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK--ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~--~A~~Fw~KqGF  213 (542)
                      ++|+|||.+.+.+.|    .+..++.|..+.|++++||+|||+.|++++++++++.|...+++.+-+  +.+.||.+||+
T Consensus        62 ~~g~vVG~~~l~~~p~l~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~tv~fy~~~g~  141 (154)
T PHA00673         62 RGEELVGFACLLVTPVPHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLVQLLPAAGY  141 (154)
T ss_pred             ECCEEEEEEEEEEecCCccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccchHHHHhCCc
Confidence            367899999998888    345889999999999999999999999999999999999999999887  59999999999


Q ss_pred             ccccc
Q 009150          214 SADTA  218 (542)
Q Consensus       214 ~~~~~  218 (542)
                      .....
T Consensus       142 ~~~~~  146 (154)
T PHA00673        142 RETNR  146 (154)
T ss_pred             hhhch
Confidence            88654

>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase

Probab=98.90  E-value=5e-09  Score=100.04  Aligned_cols=78  Identities=13%  Similarity=0.101  Sum_probs=67.3

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      +++.+||.+.+.....  ..++|..++|+|++||+|||+.|+.+++++++++|+..|.+.+..   .|..||+|+||+..
T Consensus       106 ~~g~iiG~i~l~~~~~--~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~klGF~~~  183 (191)
T TIGR02382       106 ASGDPRGYVTLRELND--TDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIRSGANIE  183 (191)
T ss_pred             cCCeEEEEEEEEecCC--CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCccc
Confidence            4678999998876543  357899999999999999999999999999999999999887543   49999999999987


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       184 ~~~  186 (191)
T TIGR02382       184 STA  186 (191)
T ss_pred             cce
Confidence            653

This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).

>PRK03624 putative acetyltransferase; Provisional

Probab=98.89  E-value=5.3e-09  Score=91.44  Aligned_cols=77  Identities=19%  Similarity=0.191  Sum_probs=64.3

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      +++++||.+.+....   +.+.|..++|+|+|||+|||+.|+..+.+.++..|++.+.+.+..   .+..||+|+||+..
T Consensus        52 ~~~~~vG~~~~~~~~---~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k~GF~~~  128 (140)
T PRK03624         52 VGGEVVGTVMGGYDG---HRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYEALGYEEQ  128 (140)
T ss_pred             cCCcEEEEEEeeccC---CCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCccc
Confidence            357899988665322   346688999999999999999999999999999999999777654   48999999999987


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       129 ~~~  131 (140)
T PRK03624        129 DRI  131 (140)
T ss_pred             cEE
Confidence            643

>cd02169 Citrate_lyase_ligase Citrate lyase ligase

Probab=98.89  E-value=2.9e-09  Score=110.01  Aligned_cols=73  Identities=18%  Similarity=0.217  Sum_probs=65.3

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      ++++|||++.+.  .     .+|..+||+|+|||+|||+.||+++++++++.|+.+++|.+...+.+||+|+||+..+..
T Consensus        13 ~~~~iVG~~~l~--~-----~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~~~fYek~GF~~~~~~   85 (297)
T cd02169          13 DAGELIATGSIA--G-----NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKNAKFFRGLGFKELANA   85 (297)
T ss_pred             ECCEEEEEEEec--c-----CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccHHHHHHHCCCEEeccc
Confidence            568999987653  2     359999999999999999999999999999999999999999889999999999987733

Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.

>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B

Probab=98.88  E-value=7.1e-09  Score=90.99  Aligned_cols=74  Identities=24%  Similarity=0.329  Sum_probs=62.9

Q ss_pred             CCCcEEEEEEeeecc---CCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~  214 (542)
                      ++|+|||.+.+....   .++  ..+.|.-+||+|+|||+|+|++|+.++.+++++.|+..+++++.  ...||+|.||+
T Consensus        48 ~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~~--~~~~Y~~~G~~  125 (127)
T PF13527_consen   48 DDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFPS--SPPFYRRFGFE  125 (127)
T ss_dssp             ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE-S--SHHHHHHTTEE
T ss_pred             ECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEecC--ChhhhhcCCCE
Confidence            478999988876653   444  57999999999999999999999999999999999999999994  69999999997


Q ss_pred             c
Q 009150          215 A  215 (542)
Q Consensus       215 ~  215 (542)
                      .
T Consensus       126 ~  126 (127)
T PF13527_consen  126 Y  126 (127)
T ss_dssp             E
T ss_pred             E
Confidence            5

...

>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase

Probab=98.88  E-value=1.3e-08  Score=88.29  Aligned_cols=78  Identities=26%  Similarity=0.246  Sum_probs=66.4

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      +++++||.+.+....   +..+|..++|+|+|||+|+|+.|++++++.+.+.|+.++.+.+..   .+..||+|+||+..
T Consensus        38 ~~~~~vg~~~~~~~~---~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~~Gf~~~  114 (131)
T TIGR01575        38 IGGKVVGYAGVQIVL---DEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQALYKKLGFNEI  114 (131)
T ss_pred             cCCeEEEEEEEEecC---CCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHHHHHHcCCCcc
Confidence            467899999865543   346799999999999999999999999999999999999876443   48899999999998


Q ss_pred             cccc
Q 009150          217 TAVS  220 (542)
Q Consensus       217 ~~~~  220 (542)
                      +...
T Consensus       115 ~~~~  118 (131)
T TIGR01575       115 AIRR  118 (131)
T ss_pred             cccc
Confidence            8764

Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.

>PRK05279 N-acetylglutamate synthase; Validated

Probab=98.87  E-value=6.5e-09  Score=112.04  Aligned_cols=78  Identities=15%  Similarity=0.332  Sum_probs=67.5

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      +++++||++.+...+ ....++|..++|+|+|||+|+|++|+.++++.+++.|+.++++.+. .+..||+|+||+..+..
T Consensus       341 ~dg~iVG~~~~~~~~-~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~~-~a~~fY~k~GF~~~g~~  418 (441)
T PRK05279        341 RDGLIIGCAALYPFP-EEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLTT-RTAHWFLERGFVPVDVD  418 (441)
T ss_pred             ECCEEEEEEEEEEcC-CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEecc-hHHHHHHHCcCEECChh
Confidence            467999988665543 3457899999999999999999999999999999999999987663 58999999999998864

>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase

Probab=98.84  E-value=8.5e-09  Score=103.93  Aligned_cols=82  Identities=18%  Similarity=0.274  Sum_probs=70.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      .+|++||.+.+.+.+ ....++|..++|+|+|||+|||+.|+.++++.+++.|+..+++.+..   .+..||+|+||...
T Consensus       165 ~~g~iVG~~~~~~~~-~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~k~GF~~~  243 (266)
T TIGR03827       165 DGGKIIALASAEMDP-ENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFARLGYAYG  243 (266)
T ss_pred             ECCEEEEEEEEecCC-CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHHHcCCccc
Confidence            367999998875554 33568999999999999999999999999999999999999887764   37889999999999


Q ss_pred             cccccc
Q 009150          217 TAVSLK  222 (542)
Q Consensus       217 ~~~~~~  222 (542)
                      +.+.+.
T Consensus       244 G~l~n~  249 (266)
T TIGR03827       244 GTLVNN  249 (266)
T ss_pred             cEEeec
Confidence            987443

Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.

>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional

Probab=98.84  E-value=1.8e-08  Score=91.03  Aligned_cols=94  Identities=20%  Similarity=0.174  Sum_probs=72.6

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      +++++||.+.+...+ +  .+++..++|+|+|||+|||+.|+..+.+.+++.|+..+.+.+..   .|..||+|+||...
T Consensus        47 ~~~~~vG~~~~~~~~-~--~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~Gf~~~  123 (146)
T PRK09491         47 VNGQMAAFAITQVVL-D--EATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEV  123 (146)
T ss_pred             ECCeEEEEEEEEeec-C--ceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHcCCEEe
Confidence            367999998776544 2  35688899999999999999999999999999999999887644   49999999999987


Q ss_pred             ccccccccCCCCCCCceeEEE
Q 009150          217 TAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       217 ~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +........+++ ..-+.+|.
T Consensus       124 ~~~~~~~~~~~~-~~d~~~~~  143 (146)
T PRK09491        124 TIRRNYYPTADG-REDAIIMA  143 (146)
T ss_pred             eeeeccccCCCC-ceeEEEEe
Confidence            766444444554 32344443

>PRK10140 putative acetyltransferase YhhY; Provisional

Probab=98.81  E-value=1.8e-08  Score=91.29  Aligned_cols=96  Identities=14%  Similarity=0.061  Sum_probs=72.1

Q ss_pred             CCCcEEEEEEeeecc--CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVP--ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~--~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      .++++||.+.+...+  .....+++. ++|+|+|||+|||+.|++.+.+++++ .|+.++.+.+..   .|..||+|+||
T Consensus        58 ~~~~~vG~~~~~~~~~~~~~~~~~~~-~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~GF  136 (162)
T PRK10140         58 IDGDVVGHLTIDVQQRPRRSHVADFG-ICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGF  136 (162)
T ss_pred             ECCEEEEEEEEecccccccceEEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHCCC
Confidence            367999999887653  222345543 89999999999999999999999998 799998766643   58999999999


Q ss_pred             cccccccccccCCCCCCCceeEEE
Q 009150          214 SADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       214 ~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +..+...+.....+. .....+|.
T Consensus       137 ~~~g~~~~~~~~~~~-~~d~~~~~  159 (162)
T PRK10140        137 EIEGTGKKYALRNGE-YVDAYYMA  159 (162)
T ss_pred             EEEeecccceeeCCe-EEEEEEEE
Confidence            998887555433332 33344554

>PRK10975 TDP-fucosamine acetyltransferase; Provisional

Probab=98.80  E-value=2e-08  Score=95.86  Aligned_cols=78  Identities=14%  Similarity=0.146  Sum_probs=66.5

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      +++++||.+.+.....  ..++|..++|+|+|||+|||+.|++++++++++.|+.++.+.+..   .|..||+|+||+..
T Consensus       109 ~~g~~vG~~~l~~~~~--~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~Gf~~~  186 (194)
T PRK10975        109 ASGQIQGFVTLRELND--TDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRSGANIE  186 (194)
T ss_pred             CCCCEEEEEEEEecCC--CceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHHCCCeEe
Confidence            4678999987765432  357899999999999999999999999999999999999877553   48999999999987


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       187 ~~~  189 (194)
T PRK10975        187 STA  189 (194)
T ss_pred             EEE
Confidence            653

>COG0456 RimI Acetyltransferases [General function prediction only]

Probab=98.77  E-value=2.2e-08  Score=92.26  Aligned_cols=78  Identities=22%  Similarity=0.266  Sum_probs=65.2

Q ss_pred             cEEEEEEeeeccCCC---ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCC-cEEEEEccc---cchhhhhhcCccc
Q 009150          143 VVVAAITYQIVPADT---QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGI-RTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       143 ~VIg~i~~~i~~~d~---~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI-~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      +++|.+.....+...   ..++|..+||+|+|||+|||++|+.++++.+++.|+ ..+.|.+..   .|.+||+|.||+.
T Consensus        72 ~~~G~~~~~~~~~~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~  151 (177)
T COG0456          72 KVVGFLLVRVVDGRPSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEV  151 (177)
T ss_pred             ceeEEEEEEEecCCccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHHcCCEE
Confidence            589988776444211   267899999999999999999999999999999997 788777765   3999999999999


Q ss_pred             ccccc
Q 009150          216 DTAVS  220 (542)
Q Consensus       216 ~~~~~  220 (542)
                      .....
T Consensus       152 ~~~~~  156 (177)
T COG0456         152 VKIRK  156 (177)
T ss_pred             Eeeeh
Confidence            87653

>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A

Probab=98.72  E-value=5.9e-08  Score=87.83  Aligned_cols=82  Identities=22%  Similarity=0.306  Sum_probs=69.2

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRL-QSVGIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~l-k~~GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      .+|++||.+.+....+....+++. +.|.+++|++|+|+.|++++++.+ ++.|+++|.+....   .+..||+|.||+.
T Consensus        58 ~~g~iiG~~~~~~~~~~~~~~~~~-~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~~GF~~  136 (155)
T PF13420_consen   58 EDGKIIGYVSLRDIDPYNHTAELS-IYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKKLGFEE  136 (155)
T ss_dssp             CTTEEEEEEEEEESSSGTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHHTTEEE
T ss_pred             cCCcEEEEEEEEeeeccCCEEEEe-eEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHhCCCEE
Confidence            488999999888666666788777 667799999999999999999999 99999999754444   4999999999999


Q ss_pred             ccccccc
Q 009150          216 DTAVSLK  222 (542)
Q Consensus       216 ~~~~~~~  222 (542)
                      .+.....
T Consensus       137 ~g~~~~~  143 (155)
T PF13420_consen  137 EGELKDH  143 (155)
T ss_dssp             EEEEEEE
T ss_pred             EEEEecE
Confidence            9987444

...

>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase

Probab=98.66  E-value=4.4e-08  Score=102.76  Aligned_cols=73  Identities=12%  Similarity=0.174  Sum_probs=65.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      ++|+|||+..+.    +   ..|..+||+++|||+|+|+.||.++++.+++.|+.++++++.+....||+|+||......
T Consensus        38 ~~~~lVg~g~l~----g---~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~~~fy~klGF~~i~~~  110 (332)
T TIGR00124        38 EDEEIIGCGGIA----G---NVIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEYAALFEYCGFKTLAEA  110 (332)
T ss_pred             ECCEEEEEEEEe----c---CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchHHHHHHHcCCEEeeee
Confidence            467999997652    1   248999999999999999999999999999999999999999888999999999998754

ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.

>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase

Probab=98.66  E-value=7.7e-08  Score=96.72  Aligned_cols=78  Identities=15%  Similarity=0.204  Sum_probs=65.3

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCccccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSADT  217 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~~  217 (542)
                      ++++||.+.+...+.+...++|+.++|+|+|||+|||+.|+.++.+.+++.|+..+.+.+..   .|..||+|+||+...
T Consensus       208 ~~~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~k~GF~~~~  287 (292)
T TIGR03448       208 PGELLGFHWTKVHPDEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYEKLGFTVAE  287 (292)
T ss_pred             CCcEEEEEEEEecCCCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHHHHcCCEEcc
Confidence            57899986555544333467888899999999999999999999999999999999887754   489999999998765


Q ss_pred             c
Q 009150          218 A  218 (542)
Q Consensus       218 ~  218 (542)
                      .
T Consensus       288 ~  288 (292)
T TIGR03448       288 V  288 (292)
T ss_pred             c
Confidence            3

Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.

>COG3153 Predicted acetyltransferase [General function prediction only]

Probab=98.59  E-value=2.1e-07  Score=89.42  Aligned_cols=114  Identities=21%  Similarity=0.250  Sum_probs=83.5

Q ss_pred             eeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCC---CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcE
Q 009150          119 LEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPAD---TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRT  195 (542)
Q Consensus       119 i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d---~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~  195 (542)
                      ..++-.++.|.--+. .++. ++|+|||-|.+-.+.-+   ..---+.-+||+|++||||||++||.+.++.|+..|...
T Consensus        34 v~~lR~~~~~~~~Ls-lVA~-d~g~vvG~Il~s~v~~~g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~  111 (171)
T COG3153          34 VDKLREGGRPDLTLS-LVAE-DDGEVVGHILFSPVTVGGEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASA  111 (171)
T ss_pred             HHHHHhcCCccccee-EEEe-eCCEEEEEEEEeEEEecCcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCE
Confidence            334433444433323 3444 44999999988777633   234458999999999999999999999999999999999


Q ss_pred             EEEEccccchhhhhhcCccccccccccccCCCCCCCceeEEE--Eec
Q 009150          196 IFCWGDKESEGFWHKQDTSADTAVSLKFCFPVKPCEKSSLVT--VNR  240 (542)
Q Consensus       196 I~l~a~~~A~~Fw~KqGF~~~~~~~~~~~~~~~~c~ea~lm~--l~~  240 (542)
                      |+++++   ..||.|-||+......--..||.   .+...|.  |..
T Consensus       112 v~vlGd---p~YY~rfGF~~~~~~~l~~p~~~---~~~~fl~~~L~~  152 (171)
T COG3153         112 VVVLGD---PTYYSRFGFEPAAGAKLYAPGPV---PDERFLALELGD  152 (171)
T ss_pred             EEEecC---cccccccCcEEccccccccCCCC---CCceEEEEEccC
Confidence            999999   99999999999887644434442   2255555  644

>PRK09831 putative acyltransferase; Provisional

Probab=98.59  E-value=8.9e-08  Score=87.21  Aligned_cols=83  Identities=13%  Similarity=0.028  Sum_probs=63.9

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      ++|++||.+.+..       .+|..++|+|++||+|||++|+.++++.++.     +.+.+...|.+||+|+||+..+..
T Consensus        60 ~~~~iiG~~~~~~-------~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l~v~~~~~a~~~Y~k~Gf~~~g~~  127 (147)
T PRK09831         60 INAQPVGFITCIE-------HYIDMLFVDPEYTRRGVASALLKPLIKSESE-----LTVDASITAKPFFERYGFQTVKQQ  127 (147)
T ss_pred             ECCEEEEEEEehh-------ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-----eEeecchhhHHHHHHCCCEEeecc
Confidence            4679999877642       3578899999999999999999999999876     334556679999999999999886


Q ss_pred             cccccCCCCCCCceeEEE
Q 009150          220 SLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       220 ~~~~~~~~~~c~ea~lm~  237 (542)
                      . . .++++ +....+|.
T Consensus       128 ~-~-~~~g~-~~~~~~m~  142 (147)
T PRK09831        128 R-V-ECRGE-WFINFYMR  142 (147)
T ss_pred             c-e-EECCE-EEEeeEEE
Confidence            4 2 24443 44455554

>PRK15130 spermidine N1-acetyltransferase; Provisional

Probab=98.51  E-value=3.4e-07  Score=86.16  Aligned_cols=100  Identities=13%  Similarity=0.093  Sum_probs=75.6

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHH-HcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQ-SVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk-~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      +|++||.+.+........-++| .++|+++|||+|+|+.++..+.+++. +.|+.+|.+.+..   .|..||+|.||+..
T Consensus        65 ~g~~iG~~~~~~~~~~~~~~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek~GF~~~  143 (186)
T PRK15130         65 DGEKAGLVELVEINHVHRRAEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFEVE  143 (186)
T ss_pred             CCEEEEEEEEEeecCCCCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHHCCCEEE
Confidence            6799999977654433345666 48999999999999999999999987 4799999776543   59999999999999


Q ss_pred             ccccccccCCCCCCCceeEEE-Eeccc
Q 009150          217 TAVSLKFCFPVKPCEKSSLVT-VNRSL  242 (542)
Q Consensus       217 ~~~~~~~~~~~~~c~ea~lm~-l~~~~  242 (542)
                      +...+.. +.+|.+....+|. +..+.
T Consensus       144 ~~~~~~~-~~~g~~~d~~~~~~~~~~~  169 (186)
T PRK15130        144 GELIHEF-FINGEYRNTIRMCIFQHQY  169 (186)
T ss_pred             EEEeheE-EECCEEEEEEEEEeeHHHH
Confidence            8765442 3344355566777 65554

>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103

Probab=98.47  E-value=3.7e-07  Score=101.54  Aligned_cols=80  Identities=16%  Similarity=0.094  Sum_probs=66.1

Q ss_pred             CCCcEEEEEEeeecc---CC-CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcC
Q 009150          140 DDDVVVAAITYQIVP---AD-TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQD  212 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d-~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqG  212 (542)
                      ++|+|||.+.+....   .+ ...++|..++|+|+|||+|||+.||.++.++++..|+.++.+.+..   .|..||+|+|
T Consensus       132 ~~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~klG  211 (547)
T TIGR03103       132 ASGAIIGTVMGVDHRKAFNDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYEKLG  211 (547)
T ss_pred             CCCeEEEEEEEEeccccccCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCC
Confidence            468999998764332   12 2357899999999999999999999999999999999999876653   4899999999


Q ss_pred             ccccccc
Q 009150          213 TSADTAV  219 (542)
Q Consensus       213 F~~~~~~  219 (542)
                      |+.+...
T Consensus       212 f~~~~~y  218 (547)
T TIGR03103       212 FRRIPVF  218 (547)
T ss_pred             CEEeeEE
Confidence            9877643

Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.

>KOG3139 consensus N-acetyltransferase [General function prediction only]

Probab=98.44  E-value=1.6e-06  Score=82.34  Aligned_cols=122  Identities=16%  Similarity=0.276  Sum_probs=86.9

Q ss_pred             hhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCC-CceeEeeeee
Q 009150           88 SKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPAD-TQYAEVPLAA  166 (542)
Q Consensus        88 ~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d-~~~aeI~~~A  166 (542)
                      ....|++-..+-.+.|+.=-        +.|--|- |-...-.++.+-.  ++++.-||++..-..... +.-+||..+|
T Consensus        23 ~~~~l~~im~Li~k~lsepy--------S~~tyrY-f~~~wp~~~~~a~--d~~~~~VGai~ck~~~~r~~~rgyi~mLa   91 (165)
T KOG3139|consen   23 AEEYLADIMRLIDKDLSEPY--------SIYTYRY-FVPNWPCFCFLAL--DEKGDTVGAIVCKLDTHRNTLRGYIAMLA   91 (165)
T ss_pred             HHHHHHHHHHHHhhhcCchh--------HHHHHHh-cccCCceEEEEEE--cCCCceEEEEEEeccccCCcceEEEEEEE
Confidence            44556666666666776533        4444444 3333333443332  122225887755544422 2469999999


Q ss_pred             eccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccccccc
Q 009150          167 VSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSADTAVS  220 (542)
Q Consensus       167 V~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~~~~~  220 (542)
                      |+++|||+|||++|+..+++.+++.|...|.|-|..   .|..+|+++||.....+.
T Consensus        92 V~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~sLGF~r~~r~~  148 (165)
T KOG3139|consen   92 VDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYESLGFKRDKRLF  148 (165)
T ss_pred             echhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHHhcCceEeccee
Confidence            999999999999999999999999999999988776   499999999999877663

>TIGR01686 FkbH FkbH-like domain

Probab=98.43  E-value=1.1e-06  Score=91.03  Aligned_cols=73  Identities=10%  Similarity=0.061  Sum_probs=62.2

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEc-----cccchhhhhhcCccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWG-----DKESEGFWHKQDTSA  215 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a-----~~~A~~Fw~KqGF~~  215 (542)
                      ++.+||.+.+...+   ...+|..++|++.+||+|+|+.|++++.+.+++.|+..|.+..     +..|..||+|+||+.
T Consensus       242 d~givG~~~~~~~~---~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~  318 (320)
T TIGR01686       242 DSGIIGIFVFEKKE---GNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLSFYEQIGFED  318 (320)
T ss_pred             CCceEEEEEEEecC---CcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHHHHHHcCCcc
Confidence            56799988765543   3567999999999999999999999999999999999998754     225999999999986


Q ss_pred             c
Q 009150          216 D  216 (542)
Q Consensus       216 ~  216 (542)
                      .
T Consensus       319 ~  319 (320)
T TIGR01686       319 E  319 (320)
T ss_pred             C
Confidence            4

The C-terminal portion of this domain is unique to this family (by BLAST).

>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT)

Probab=98.43  E-value=8.6e-07  Score=75.42  Aligned_cols=60  Identities=17%  Similarity=0.153  Sum_probs=49.3

Q ss_pred             eeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEc-cc-cchhhhhhcCcccccc
Q 009150          159 YAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWG-DK-ESEGFWHKQDTSADTA  218 (542)
Q Consensus       159 ~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a-~~-~A~~Fw~KqGF~~~~~  218 (542)
                      +++|..+.+.|++||+|+|+.|+.++.+.+.+.|..-...+. +| .|..||+|.||+...+
T Consensus        21 ~g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~~~l~v~~~N~~s~~ly~klGf~~~~~   82 (86)
T PF08445_consen   21 DGEIGGVYTLPEHRRRGLGSALVAALARELLERGKTPFLYVDADNEASIRLYEKLGFREIEE   82 (86)
T ss_dssp             TCCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSEEEEEEETT-HHHHHHHHHCT-EEEEE
T ss_pred             CcEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHcCCEEEEE
Confidence            488999999999999999999999999999999987654333 33 4999999999998764

This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.

>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=98.41  E-value=3.2e-07  Score=84.88  Aligned_cols=78  Identities=23%  Similarity=0.232  Sum_probs=68.4

Q ss_pred             CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~  215 (542)
                      ..++|||..++.|..    .--.=+-|.-.+|+++||||+||+.|+..|...++++|.++|.|.-+..-..||+|.||+.
T Consensus        62 ~s~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~FYeKcG~s~  141 (150)
T KOG3396|consen   62 ESEKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVKFYEKCGYSN  141 (150)
T ss_pred             CcCeEEEEEEEEEehhhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhhHHHHcCccc
Confidence            467899999999885    1112345888999999999999999999999999999999999999999999999999987


Q ss_pred             cc
Q 009150          216 DT  217 (542)
Q Consensus       216 ~~  217 (542)
                      ..
T Consensus       142 ~~  143 (150)
T KOG3396|consen  142 AG  143 (150)
T ss_pred             cc
Confidence            65

>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional

Probab=98.40  E-value=1.1e-06  Score=82.22  Aligned_cols=95  Identities=8%  Similarity=0.055  Sum_probs=71.7

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++++||.+.+....++.+.++|.. .|+++|||+|+|+.++..+.+++.+ .|+.+|.+.+..   .|..+++|+||+..
T Consensus        75 ~~~~iG~~~l~~~~~~~~~~~ig~-~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek~Gf~~~  153 (179)
T PRK10151         75 EDELIGVLSFNRIEPLNKTAYIGY-WLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALRNGFTLE  153 (179)
T ss_pred             CCEEEEEEEEEeeccCCCceEEEE-EEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHHCCCEEE
Confidence            578999998766544445788875 6999999999999999999999975 689998665433   49999999999999


Q ss_pred             ccccccccCCCCCCCceeEEE
Q 009150          217 TAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       217 ~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +..+......+. .....+|.
T Consensus       154 g~~~~~~~~~g~-~~D~~~~~  173 (179)
T PRK10151        154 GCLKQAEYLNGA-YDDVNLYA  173 (179)
T ss_pred             eEeccceEECCE-EEEEEEEE
Confidence            888554333332 33344444

>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A

Probab=98.39  E-value=2.1e-06  Score=75.86  Aligned_cols=74  Identities=19%  Similarity=0.214  Sum_probs=62.0

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRL-QSVGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~l-k~~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      +++++||.+.+.........++|. +.|.++|||+|+|+.++..+.+++ ...|+.+|.+.+..   .|..+++|+||+
T Consensus        65 ~~~~~iG~i~~~~~~~~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~GF~  142 (142)
T PF13302_consen   65 DDGEIIGFIGLYNIDKNNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEKLGFE  142 (142)
T ss_dssp             TTTEEEEEEEEEEEETTTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHHTT-E
T ss_pred             cCCceEEEeeeeecccCCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHHcCCC
Confidence            557899999985554455788898 779999999999999999999999 68999999666655   399999999995

...

>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate

Probab=98.38  E-value=1.7e-06  Score=64.05  Aligned_cols=58  Identities=19%  Similarity=0.179  Sum_probs=52.2

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC  198 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l  198 (542)
                      ++++||.+.+...+...+.++|..++|+++|||+|+|+.++.++.+++++.|+.++.+
T Consensus         7 ~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~   64 (65)
T cd04301           7 DGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL   64 (65)
T ss_pred             CCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence            5689999988777655578999999999999999999999999999999999999875

NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera

>TIGR01211 ELP3 histone acetyltransferase, ELP3 family

Probab=98.35  E-value=1.3e-06  Score=96.75  Aligned_cols=88  Identities=18%  Similarity=0.228  Sum_probs=70.6

Q ss_pred             eEEEeeecccCCCCcEEEEEEeeeccCC------CceeEeeeeee-----------ccCccccChHHHHHHHHHHHHHHc
Q 009150          129 CTLLLKSSFMDDDDVVVAAITYQIVPAD------TQYAEVPLAAV-----------SSIYQHKGVGRLLYLELRKRLQSV  191 (542)
Q Consensus       129 ~~l~~~~~~~~~~~~VIg~i~~~i~~~d------~~~aeI~~~AV-----------~~~~QgkGiG~~Lv~~l~~~lk~~  191 (542)
                      ++.+-+..  ++++.+||-+-++.-.++      ..-+.|.++.|           +++|||+|||+.||+++++.+++.
T Consensus       412 e~F~~y~~--~~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~  489 (522)
T TIGR01211       412 EFFLSYED--PKNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEE  489 (522)
T ss_pred             eEEEEEEc--CCCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHC
Confidence            44444432  245689999977766432      23677888884           489999999999999999999999


Q ss_pred             CCcEEEEEccccchhhhhhcCcccccc
Q 009150          192 GIRTIFCWGDKESEGFWHKQDTSADTA  218 (542)
Q Consensus       192 GI~~I~l~a~~~A~~Fw~KqGF~~~~~  218 (542)
                      |+.+|.+.++.+|..||+|+||...+.
T Consensus       490 G~~~i~v~s~~~A~~FY~klGf~~~g~  516 (522)
T TIGR01211       490 GSEKILVISGIGVREYYRKLGYELDGP  516 (522)
T ss_pred             CCCEEEEeeCchHHHHHHHCCCEEEcc
Confidence            999999999889999999999998764

The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.

>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional

Probab=98.35  E-value=2.4e-06  Score=81.00  Aligned_cols=96  Identities=8%  Similarity=0.030  Sum_probs=71.6

Q ss_pred             CCCcEEEEEEeeeccC-CCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~-d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      +++++||.+.+..... ..+.++|. ++|+++|||+|+|+.++..+++++.+ +|+++|.+.+..   .|..+++|+||+
T Consensus        84 ~~~~~iG~i~l~~~~~~~~~~~eig-~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~Gf~  162 (194)
T PRK10809         84 DEKEIIGVANFSNVVRGSFHACYLG-YSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLARLGFE  162 (194)
T ss_pred             CCCeEEEEEEEEeecCCCeeeEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHHCCCc
Confidence            3568999998876543 22446555 67999999999999999999999987 699999877755   499999999999


Q ss_pred             ccccccccccCCCCCCCceeEEE
Q 009150          215 ADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       215 ~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      ..+.......+.+. ...+.+|.
T Consensus       163 ~~g~~~~~~~~~g~-~~d~~~~~  184 (194)
T PRK10809        163 KEGYAKDYLLIDGQ-WRDHVLTA  184 (194)
T ss_pred             EEeeeccccccCCe-EEEEEEee
Confidence            87766544333332 22344555

>PRK10514 putative acetyltransferase; Provisional

Probab=98.34  E-value=8.2e-07  Score=79.65  Aligned_cols=70  Identities=16%  Similarity=0.124  Sum_probs=53.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc-ccchhhhhhcCcccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD-KESEGFWHKQDTSADTA  218 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~-~~A~~Fw~KqGF~~~~~  218 (542)
                      +++++||.+.+..       .+|..++|+|+|||+|||++|++++.+.++.  +. ..+... ..|..||+|+||+..+.
T Consensus        57 ~~~~~iG~~~~~~-------~~~~~~~v~p~~rgkGig~~Ll~~~~~~~~~--i~-~~v~~~N~~a~~~yek~Gf~~~~~  126 (145)
T PRK10514         57 ERDQPVGFMLLSG-------GHMEALFVDPDVRGCGVGRMLVEHALSLHPE--LT-TDVNEQNEQAVGFYKKMGFKVTGR  126 (145)
T ss_pred             cCCcEEEEEEEec-------CcEeEEEECHHhccCCHHHHHHHHHHHhccc--cE-EEeecCCHHHHHHHHHCCCEEecc
Confidence            4679999886531       2366899999999999999999999987543  22 222333 35999999999998775


Q ss_pred             c
Q 009150          219 V  219 (542)
Q Consensus       219 ~  219 (542)
                      .
T Consensus       127 ~  127 (145)
T PRK10514        127 S  127 (145)
T ss_pred             c
Confidence            4

>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]

Probab=98.34  E-value=5.5e-06  Score=78.20  Aligned_cols=136  Identities=16%  Similarity=0.100  Sum_probs=93.8

Q ss_pred             ceEEeeCCCCccccchhhhHHHHHHHHhhccCCchhhhhcCcccc-ceeeeecccceeEEEeeecccCCCCcEEEEEEee
Q 009150           73 YIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSM-FLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQ  151 (542)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~-~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~  151 (542)
                      ..+.++.|+|+|+=+  .++.+.-.-.+  +..-.-+.+.+..++ ||.+.   -.|..+..+..   .++.++|.+.|.
T Consensus         4 ~~IR~at~~D~~~i~--rLikela~Fek--~~~~v~~te~~l~~~~F~d~~---~~~~~v~~ie~---~~~~~aGf~~yf   73 (163)
T KOG3216|consen    4 IRIRLATPKDCEDIL--RLIKELAEFEK--LEDQVEATEENLARDGFIDPP---FKHWLVAAIET---SGEVVAGFALYF   73 (163)
T ss_pred             eEEEecCcccHHHHH--HHHHHHHHHHH--hccchhhchhhhhhhhccCCC---ccEEEEEEEec---CCCceeEEeeee
Confidence            346677788773222  22333222222  111222344444443 66665   24555555543   366899988777


Q ss_pred             ecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc---ccchhhhhhcCcccccc
Q 009150          152 IVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD---KESEGFWHKQDTSADTA  218 (542)
Q Consensus       152 i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~---~~A~~Fw~KqGF~~~~~  218 (542)
                      ..+   .++++.||--+.|.+.|||+|+|+.|++.+-+++.+.|...+..++.   +.|..||.|.|++...+
T Consensus        74 ~~ystW~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k~gaq~l~~  146 (163)
T KOG3216|consen   74 NNYSTWLGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEKVGAQDLKE  146 (163)
T ss_pred             cccccccccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHHHhCccccce
Confidence            665   56689999999999999999999999999999999999999854443   36999999999998876

>PHA01807 hypothetical protein

Probab=98.33  E-value=1.9e-06  Score=81.14  Aligned_cols=70  Identities=14%  Similarity=0.085  Sum_probs=56.3

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeee---eeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhh
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPL---AAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHK  210 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~---~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K  210 (542)
                      +++++||.+.+.... +..+++|..   +.|.|+|||+|||+.||.++++.++..|+..+.+.++.   .|..||++
T Consensus        60 ~dg~lvG~~~l~~~~-~~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~~  135 (153)
T PHA01807         60 RDGKLAGIAVLVFED-DPHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYRR  135 (153)
T ss_pred             ECCEEEEEEEEEcCC-CcceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHh
Confidence            367999998876554 334555554   69999999999999999999999999999988555544   38899976

>KOG3548 consensus DNA damage checkpoint protein RHP9/CRB2/53BP1 [Replication, recombination and repair]

Probab=98.32  E-value=1.1e-06  Score=100.23  Aligned_cols=138  Identities=19%  Similarity=0.241  Sum_probs=92.1

Q ss_pred             CeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-Cc--------------------------eeEEEECCCCCcHHHHHH
Q 009150          398 CFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-ST--------------------------STHVVTGKVRKTLNFLTA  450 (542)
Q Consensus       398 ~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~--------------------------~THLIt~k~~RTlKfL~A  450 (542)
                      ++.|+||+.....  +.....+...||.|.+.. ..                          --.||+..-.||.|||.|
T Consensus       928 ~cvF~lTsa~~sd--~~~r~s~e~~gg~vle~gl~~~Fn~p~~g~~~~lr~Ln~~q~~ks~~qalLIsdth~Rt~KYLea 1005 (1176)
T KOG3548|consen  928 GCVFMLTSANRSD--SASRPSMEKHGGLVLEKGLMNLFNTPFKGGGIVLRQLNSFQERKSNYQALLISDTHYRTHKYLEA 1005 (1176)
T ss_pred             ceeEEEeccccch--hhhhhhhhccCChhhhccccccccccccCCcchHHhhhHHhhhccccceeEeehhhhHHHHHHHH
Confidence            5889999987554  356677777888777553 11                          125778888999999999


Q ss_pred             HhcCCeEeCHHHHHHHHHcCCCCCCCCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCC-----------C
Q 009150          451 LCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAH-----------I  519 (542)
Q Consensus       451 IA~G~wIVSpsWL~dSlk~Gk~LdEe~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~-----------v  519 (542)
                      ||+|+|+|++.||.+|.++++.+|-.+|.|.....-.. ...+.+++.  ..++...+++..+++.+-           -
T Consensus      1006 LA~giPcVh~~fI~aC~e~nr~Vdy~~YLLpsGyS~rl-ds~l~~~i~--~fn~~~nLkd~~l~vk~~l~~~~v~q~gp~ 1082 (1176)
T KOG3548|consen 1006 LARGIPCVHNTFIQACGEQNRCVDYTDYLLPSGYSIRL-DSQLMPAIE--PFNPSENLKDTTLYVKSTLSAREVTQTGPG 1082 (1176)
T ss_pred             HHcCCCcccHHHHHHHHhccccccchhhcccCcccccc-ccccccCcc--ccCchhhccceeeEeeccccceeEEEecCC
Confidence            99999999999999999999999999999987642111 111222110  022222333333333211           1


Q ss_pred             CCCHHHHHHHHHhCCCEEecc
Q 009150          520 QPPIKTLSAIVRSAGGNVSSK  540 (542)
Q Consensus       520 ~p~~~~L~~LIeagGG~V~~~  540 (542)
                      ....+.+..++++||+-++..
T Consensus      1083 ~~f~e~~~e~le~G~aa~vd~ 1103 (1176)
T KOG3548|consen 1083 GTFIEIWKEILELGGAAVVDG 1103 (1176)
T ss_pred             cchHHHHHHHHHhhchheecc
Confidence            223577899999999877654

>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase

Probab=98.30  E-value=1.1e-06  Score=88.37  Aligned_cols=76  Identities=14%  Similarity=0.181  Sum_probs=58.2

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCcccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADTA  218 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~~  218 (542)
                      ++++|||.+.+......  .++|..++|+|+|||+|||+.|+.++++.+..  --.+++...+ .|..||+|+||.....
T Consensus        53 ~~~~~vG~~~~~~~~~~--~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~~--~~~~~~~~~n~~a~~fy~~~Gf~~~~~  128 (292)
T TIGR03448        53 DSDPIVGYANLVPARGT--DPAMAELVVHPAHRRRGIGRALIRALLAKGGG--RLRVWAHGDLPAARALASRLGLVPTRE  128 (292)
T ss_pred             ECCEEEEEEEEEcCCCC--cceEEEEEECHhhcCCCHHHHHHHHHHHhccC--ceEEEEcCCCHHHHHHHHHCCCEEccE
Confidence            36789999887665433  36799999999999999999999999998652  2233333333 4899999999998875


Q ss_pred             c
Q 009150          219 V  219 (542)
Q Consensus       219 ~  219 (542)
                      .
T Consensus       129 ~  129 (292)
T TIGR03448       129 L  129 (292)
T ss_pred             E
Confidence            4

Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.

>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase

Probab=98.30  E-value=3e-06  Score=76.59  Aligned_cols=84  Identities=10%  Similarity=0.057  Sum_probs=66.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      .+|++||.+.+.........++|..+ +++.+| +|||+.++..+.+++.+ .|+..|.+.+..   .|..||+|+||..
T Consensus        58 ~~g~~vG~~~~~~~~~~~~~~~~g~~-~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~Gf~~  135 (156)
T TIGR03585        58 QESRPIGVISFTDINLVHKSAFWGIY-ANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEKFGFER  135 (156)
T ss_pred             ECCEEEEEEEEEecChhhCeEEEEEE-eChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHHcCCeE
Confidence            46899999887655433345677655 999999 99999999999999885 799999775544   4999999999999


Q ss_pred             cccccccccC
Q 009150          216 DTAVSLKFCF  225 (542)
Q Consensus       216 ~~~~~~~~~~  225 (542)
                      .+..+.-..+
T Consensus       136 ~g~~~~~~~~  145 (156)
T TIGR03585       136 EGVFRQGIFK  145 (156)
T ss_pred             eeeehhheeE
Confidence            8877444334

Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.

>KOG3397 consensus Acetyltransferases [General function prediction only]

Probab=98.29  E-value=3e-06  Score=81.51  Aligned_cols=122  Identities=16%  Similarity=0.276  Sum_probs=101.0

Q ss_pred             hhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeee
Q 009150           88 SKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAV  167 (542)
Q Consensus        88 ~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV  167 (542)
                      +..+|+|.-.+--.|-|.-.    |..|+..-.-|  |..-.+|+++.-   ....|||-.-+--.+...+-..+..+.|
T Consensus        21 rPELlk~~~~LIN~eWPRS~----TsR~hSL~~Sc--Ds~P~sL~Ll~E---~~~~VigH~rLS~i~n~~~al~VEsVVV   91 (225)
T KOG3397|consen   21 RPELLKESMTLINSEWPRSD----TSREHSLKKSC--DSPPMSLLLLNE---ENDEVLGHSRLSHLPNRDHALWVESVVV   91 (225)
T ss_pred             cHHHHHHHHHHHhccCCccc----hhhhhhhhccc--CCCCeeeeeecc---cccceeeeeccccCCCCCceeEEEEEEE
Confidence            57899999999999999877    44554433445  888888988862   4568999876666666667778889999


Q ss_pred             ccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          168 SSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       168 ~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      +.+.||+|+|++||+.++.+++..|+++++|-+. +..+||+..||+.-+-+
T Consensus        92 ~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~-DQ~~FYe~lGYe~c~Pi  142 (225)
T KOG3397|consen   92 KKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTD-DQCRFYESLGYEKCDPI  142 (225)
T ss_pred             ehhhccccHHHHHHHHHHHHHHHhhhhheeeecc-cchhhhhhhcccccCce
Confidence            9999999999999999999999999999999888 67899999999876644

>PRK01346 hypothetical protein; Provisional

Probab=98.26  E-value=2.6e-06  Score=90.49  Aligned_cols=78  Identities=18%  Similarity=0.137  Sum_probs=65.5

Q ss_pred             CCCcEEEEEEeeecc---C-C--CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVP---A-D--TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~-d--~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF  213 (542)
                      ++++|||.+.+....   + +  ...++|..++|+|+|||+|||+.||.++++++++.|+..+.|++.  ...||+|.||
T Consensus        54 ~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~--~~~~Y~r~Gf  131 (411)
T PRK01346         54 DGDEVVGTAGAFDLRLTVPGGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTAS--EGGIYGRFGY  131 (411)
T ss_pred             ECCEEEEEEEEeccccccCCCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECC--chhhHhhCCC
Confidence            467899987765432   1 2  247889999999999999999999999999999999999999877  4689999999


Q ss_pred             cccccc
Q 009150          214 SADTAV  219 (542)
Q Consensus       214 ~~~~~~  219 (542)
                      ......
T Consensus       132 ~~~~~~  137 (411)
T PRK01346        132 GPATYS  137 (411)
T ss_pred             eeccce
Confidence            887654

>PRK10562 putative acetyltransferase; Provisional

Probab=98.23  E-value=2.6e-06  Score=77.15  Aligned_cols=70  Identities=14%  Similarity=0.220  Sum_probs=53.3

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCccccccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADTAV  219 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~~~  219 (542)
                      ++++||.+.+..      ..+|..++|+++|||+|||+.|++++.+.+..+   .+.+...+ .|..||+|+||+.++..
T Consensus        56 ~~~~iG~~~~~~------~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~---~~~v~~~N~~s~~~y~k~Gf~~~~~~  126 (145)
T PRK10562         56 DGKLLGFVSVLE------GRFVGALFVAPKAVRRGIGKALMQHVQQRYPHL---SLEVYQKNQRAVNFYHAQGFRIVDSA  126 (145)
T ss_pred             CCEEEEEEEEee------ccEEEEEEECHHHcCCCHHHHHHHHHHhhCCeE---EEEEEcCChHHHHHHHHCCCEEcccc
Confidence            568999987632      135888999999999999999999998864332   22233333 59999999999998854

>KOG3226 consensus DNA repair protein [Replication, recombination and repair]

Probab=98.18  E-value=1.7e-06  Score=90.86  Aligned_cols=87  Identities=18%  Similarity=0.308  Sum_probs=79.4

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCC
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVD  474 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~Ld  474 (542)
                      .++.++++|||...+ |..|....-.||+++-.++ ..+||||+.-. .|.||-...-.|-.||+-+||.+|.++.++|+
T Consensus       318 L~GVV~VlSGfqNP~-Rs~LRskAl~LGAkY~pDW~~gsThLICAF~-NTPKy~QV~g~Gg~IV~keWI~~Cy~~kk~lp  395 (508)
T KOG3226|consen  318 LEGVVFVLSGFQNPE-RSTLRSKALTLGAKYQPDWNAGSTHLICAFP-NTPKYRQVEGNGGTIVSKEWITECYAQKKLLP  395 (508)
T ss_pred             hhceEEEEecccCch-HHHHHHHHHhhcccccCCcCCCceeEEEecC-CCcchhhcccCCceEeeHHHHHHHHHHHhhcc
Confidence            467899999999887 7889999999999999998 88999999864 59999999999999999999999999999999


Q ss_pred             CCCcccCCch
Q 009150          475 ESSYMLNDDD  484 (542)
Q Consensus       475 Ee~YeL~d~~  484 (542)
                      ...|.+...+
T Consensus       396 ~rrYlm~~~~  405 (508)
T KOG3226|consen  396 IRRYLMHAGK  405 (508)
T ss_pred             HHHHHhcCCC
Confidence            9999987654

>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]

Probab=98.13  E-value=5.2e-06  Score=80.77  Aligned_cols=78  Identities=21%  Similarity=0.264  Sum_probs=68.7

Q ss_pred             CcEEEEEEeeecc-CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCccccc
Q 009150          142 DVVVAAITYQIVP-ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSADT  217 (542)
Q Consensus       142 ~~VIg~i~~~i~~-~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~~  217 (542)
                      +.+||-+.+++.- .+..+.|++++-|.+.|||+|||+.|+.+|...+.....++|+|.++.   .|.+||+++||.+..
T Consensus       102 ~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~~gf~~~~  181 (202)
T KOG2488|consen  102 SKLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYHRLGFVVDE  181 (202)
T ss_pred             CceeeEEEEEEEcccCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHHHcCcccCC
Confidence            3789988887765 455799999999999999999999999999999999999999887777   499999999999876


Q ss_pred             cc
Q 009150          218 AV  219 (542)
Q Consensus       218 ~~  219 (542)
                      +-
T Consensus       182 ~s  183 (202)
T KOG2488|consen  182 ES  183 (202)
T ss_pred             CC
Confidence            53

>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A

Probab=98.05  E-value=1.5e-05  Score=67.06  Aligned_cols=67  Identities=13%  Similarity=0.232  Sum_probs=56.0

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQ  211 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~Kq  211 (542)
                      ++|+.+|-+.|..  .+ ....|.|.-|.+++||||||+.|++++.+++++.|++-+-++.+  +..|++|+
T Consensus         6 ~~g~~~a~l~Y~~--~~-~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~kv~p~C~y--~~~~~~~h   72 (78)
T PF14542_consen    6 DDGEEIAELTYRE--DG-GVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLKVVPTCSY--VAKYFRRH   72 (78)
T ss_dssp             SSTTEEEEEEEEE--SS-SEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-EEEETSHH--HHHHHHH-
T ss_pred             ECCEEEEEEEEEe--CC-CEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCEEEEECHH--HHHHHHhC
Confidence            4588999999977  23 35559999999999999999999999999999999999888888  88888775

>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A

Probab=97.99  E-value=2.8e-05  Score=70.65  Aligned_cols=80  Identities=16%  Similarity=0.147  Sum_probs=62.6

Q ss_pred             CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccc---cchhhhhhc
Q 009150          140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDK---ESEGFWHKQ  211 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~Kq  211 (542)
                      .+|+++|-+.+.-..    .+..+..|..++|+++++|+|+|+.++..+.+.+.+. ++..|.+.+..   .+...|+|.
T Consensus        55 ~dg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~  134 (152)
T PF13523_consen   55 DDGEPIGYFEIYWPDEDYDADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEKA  134 (152)
T ss_dssp             ETTEEEEEEEEEEGGGSS---TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHHT
T ss_pred             ECCEEEEEEEEecccccccCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHHc
Confidence            377999977553311    1335666999999999999999999999999999987 89999887765   399999999


Q ss_pred             Cccccccc
Q 009150          212 DTSADTAV  219 (542)
Q Consensus       212 GF~~~~~~  219 (542)
                      ||..+++.
T Consensus       135 GF~~~g~~  142 (152)
T PF13523_consen  135 GFRKVGEF  142 (152)
T ss_dssp             T-EEEEEE
T ss_pred             CCEEeeEE
Confidence            99999886

>COG3393 Predicted acetyltransferase [General function prediction only]

Probab=97.89  E-value=2.8e-05  Score=79.13  Aligned_cols=78  Identities=17%  Similarity=0.169  Sum_probs=65.5

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEE-ccc-cchhhhhhcCccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCW-GDK-ESEGFWHKQDTSADT  217 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~-a~~-~A~~Fw~KqGF~~~~  217 (542)
                      ++|+||+..--.-..+  .|++|.-.++.|+||||||++.|+..+.+.+-+.|-..++.+ ++| .|..-|+|.||+.++
T Consensus       184 ~d~~iVa~A~t~a~~~--~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~L~~~~~N~~A~~iY~riGF~~~g  261 (268)
T COG3393         184 GDGKIVAKAETAAENP--AYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPCLFVNSDNPVARRIYQRIGFREIG  261 (268)
T ss_pred             cCCcEEEeeeccccCC--cceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCeeEEEEecCCHHHHHHHHHhCCeecc
Confidence            4569999875444444  599999999999999999999999999999999997777555 344 699999999999988


Q ss_pred             cc
Q 009150          218 AV  219 (542)
Q Consensus       218 ~~  219 (542)
                      +.
T Consensus       262 ~~  263 (268)
T COG3393         262 EF  263 (268)
T ss_pred             eE
Confidence            54

>KOG1929 consensus Nucleotide excision repair factor NEF2, RAD4/CUT5 component [Replication, recombination and repair]

Probab=97.87  E-value=4.2e-05  Score=88.26  Aligned_cols=127  Identities=16%  Similarity=0.183  Sum_probs=101.1

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCC
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVD  474 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~Ld  474 (542)
                      -.++.|..|++.+.. ++.|...+.++||.+..+. ..|||||+++.. +-|+..|-..+++|++++|+...+..... .
T Consensus        10 ~~~v~~~~t~i~p~~-~~~l~~~~~~~Gg~~~~~~t~~~thli~~~~~-s~~~~~a~~~~~~~~~~~wi~~~~d~~~~-~   86 (811)
T KOG1929|consen   10 MSGVTFSPTGINPIK-REELSKKFIKLGGIDFKDFTPSVTHLIVGSVT-SSKYAAAHRFDIKVLDSSWIDYIYDLWLL-N   86 (811)
T ss_pred             cCCceeccCcCCHHH-HHHHHHHHHhcCceeeeccCCcCceeeccccc-ccchhhhhcCCCceecchHHHHHHHHhhh-h
Confidence            345778889998655 7899999999999999987 899999999976 56778888889999999999999888775 2


Q ss_pred             CCCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          475 ESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       475 Ee~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                       ..=.+.+..              + .....+.|.|+.|++++.....+..+..+|-..||+....|
T Consensus        87 -~e~~~~~~l--------------~-~~~~~p~~~~~~Vc~tgl~~~eK~ei~~~v~k~gg~~~~~L  137 (811)
T KOG1929|consen   87 -KEIRLLDPL--------------R-DTMKCPGFFGLKVCLTGLSGDEKSEIKILVPKHGGTLHRSL  137 (811)
T ss_pred             -ccCccCccc--------------h-hhhcCCcccceEEEecccchHHHHHHHHHhhhcccEEehhh
Confidence             211111211              1 12347789999999999887778999999999999987764

>PLN03122 Poly [ADP-ribose] polymerase; Provisional

Probab=97.86  E-value=4.3e-05  Score=88.51  Aligned_cols=86  Identities=20%  Similarity=0.192  Sum_probs=75.0

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCceeEEEECCCC--C--cHHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVR--K--TLNFLTALCSGAWIVSPNWLKESFREG  470 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~~THLIt~k~~--R--TlKfL~AIA~G~wIVSpsWL~dSlk~G  470 (542)
                      +..+..|+|||.... .|..+++.|+.+||++.+.+..+||+|+....  +  +-|+-.|...|++||+.+||.++++.+
T Consensus       189 pL~G~~fviTGtl~~-sr~elK~~Ie~~GGkvsssVs~~T~lIvt~~ev~k~gsSKlkkAk~lgIpIVsEd~L~d~i~~~  267 (815)
T PLN03122        189 PFSGMMISLSGRLSR-THQYWKKDIEKHGGKVANSVEGVTCLVVSPAERERGGSSKIAEAMERGIPVVREAWLIDSIEKQ  267 (815)
T ss_pred             CcCCcEEEEeCCCCC-CHHHHHHHHHHcCCEEccccccceEEEEcCccccccCccHHHHHHHcCCcCccHHHHHHHHhcC
Confidence            356789999998765 47889999999999999999999999886522  2  368899999999999999999999999


Q ss_pred             CCCCCCCcccC
Q 009150          471 RFVDESSYMLN  481 (542)
Q Consensus       471 k~LdEe~YeL~  481 (542)
                      +.+++..|.+.
T Consensus       268 k~~~~~~y~l~  278 (815)
T PLN03122        268 EAQPLEAYDVV  278 (815)
T ss_pred             Ccccchhhhhc
Confidence            99999999874

>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B

Probab=97.81  E-value=3.8e-05  Score=75.50  Aligned_cols=76  Identities=20%  Similarity=0.202  Sum_probs=49.8

Q ss_pred             ceeEeeeeeeccCccccChHHHHHHHHHHHH-------------------------HHcCCcEE-EEEccc-cchhhhhh
Q 009150          158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRL-------------------------QSVGIRTI-FCWGDK-ESEGFWHK  210 (542)
Q Consensus       158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~l-------------------------k~~GI~~I-~l~a~~-~A~~Fw~K  210 (542)
                      .++-|.-.||+|++|++|||+++++.+.+++                         +..++..+ ..++.. +=-.||.|
T Consensus        89 ~g~RIvRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~t~~Ll~FW~k  168 (196)
T PF13718_consen   89 SGARIVRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGATPELLKFWQK  168 (196)
T ss_dssp             EEEEEEEEEE-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEEEE--HHHHHHHHC
T ss_pred             cceeEEEEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCCCHHHHHHHHH
Confidence            5667899999999999999999999999999                         46788887 333332 35699999


Q ss_pred             cCccccccc-cccccCCCCCCCceeEEE
Q 009150          211 QDTSADTAV-SLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       211 qGF~~~~~~-~~~~~~~~~~c~ea~lm~  237 (542)
                      +||..+--- .+...-++.    +++|+
T Consensus       169 ~gf~pv~l~~~~n~~SGe~----S~iml  192 (196)
T PF13718_consen  169 NGFVPVYLGQTRNEASGEH----SAIML  192 (196)
T ss_dssp             TT-EEEEE-SS--TTT-------EEEEE
T ss_pred             CCcEEEEEecCcccccCce----eeeEE
Confidence            999998855 555566776    88886

>COG2153 ElaA Predicted acyltransferase [General function prediction only]

Probab=97.81  E-value=4e-05  Score=71.96  Aligned_cols=77  Identities=16%  Similarity=0.193  Sum_probs=66.4

Q ss_pred             CCcEEEEEEeeeccCCCceeE--eeeeeeccCccccChHHHHHHHHHHHHHHcCCcE-EEEEccccchhhhhhcCccccc
Q 009150          141 DDVVVAAITYQIVPADTQYAE--VPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRT-IFCWGDKESEGFWHKQDTSADT  217 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~ae--I~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~-I~l~a~~~A~~Fw~KqGF~~~~  217 (542)
                      +|+++|+.  ++.|++.+|.+  |+-++|++++||+|+|+.||..+++.+++..-.+ +.+-|-.--..||..-||....
T Consensus        58 ~g~LvAya--RLl~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahLq~fYa~~GFv~~~  135 (155)
T COG2153          58 DGELVAYA--RLLPPGAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHLQDFYASFGFVRVG  135 (155)
T ss_pred             CCeEEEEE--ecCCCCCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHHHHHHHHhCcEEcC
Confidence            78999987  88888887777  9999999999999999999999999999986443 4555554589999999999988


Q ss_pred             cc
Q 009150          218 AV  219 (542)
Q Consensus       218 ~~  219 (542)
                      +.
T Consensus       136 e~  137 (155)
T COG2153         136 EE  137 (155)
T ss_pred             ch
Confidence            76

>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.80  E-value=0.00013  Score=70.26  Aligned_cols=97  Identities=14%  Similarity=0.110  Sum_probs=71.9

Q ss_pred             CCCCcEEEEEEeeeccCCCceeE--eeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCc
Q 009150          139 DDDDVVVAAITYQIVPADTQYAE--VPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       139 ~~~~~VIg~i~~~i~~~d~~~ae--I~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      .++|+|+|-+.+..+.+-.-|..  -...-|+++.||+|||++|+..|.+++...|++.+......   .|.+|+++.||
T Consensus        59 ~~~g~v~G~a~~~~fr~r~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~~~GF  138 (169)
T COG1247          59 EEDGKVLGYASAGPFRERPAYRHTVELSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIALHEKLGF  138 (169)
T ss_pred             cCCCeEEEEEEeeeccCccccceEEEEEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHHHHHCCC
Confidence            35689999888877763332333  35567899999999999999999999999999888443332   49999999999


Q ss_pred             ccccccccc-ccCCCCCCCceeEEE
Q 009150          214 SADTAVSLK-FCFPVKPCEKSSLVT  237 (542)
Q Consensus       214 ~~~~~~~~~-~~~~~~~c~ea~lm~  237 (542)
                      +..+....- ..|+.  --+.++|.
T Consensus       139 ~~~G~~~~vg~k~g~--wld~~~~~  161 (169)
T COG1247         139 EEVGTFPEVGDKFGR--WLDLVLMQ  161 (169)
T ss_pred             EEeccccccccccce--EEeeeeee
Confidence            999977333 22322  23366666

>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]

Probab=97.75  E-value=0.00016  Score=65.92  Aligned_cols=86  Identities=15%  Similarity=0.084  Sum_probs=69.7

Q ss_pred             CCcEEEEEEeeeccC--CCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCcc
Q 009150          141 DDVVVAAITYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~--d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      ++++||.+.+...+.  +...++|.... +++++|+|+|+..+..+.+++-+ .|+.+|.+.++.   .|....+|+||+
T Consensus        76 ~~~~iG~~~~~~~~~~~~~~~~~ig~~l-~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~Gf~  154 (187)
T COG1670          76 DGELIGVIGLSDIDRAANGDLAEIGYWL-DPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKLGFR  154 (187)
T ss_pred             CCeEEEEEEEEEeccccccceEEEEEEE-ChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHcCCh
Confidence            568999999987762  34577665554 99999999999999999999887 899999766655   399999999999


Q ss_pred             ccccccccccCCC
Q 009150          215 ADTAVSLKFCFPV  227 (542)
Q Consensus       215 ~~~~~~~~~~~~~  227 (542)
                      ..+..+....+.+
T Consensus       155 ~eg~~~~~~~~~g  167 (187)
T COG1670         155 LEGELRQHEFIKG  167 (187)
T ss_pred             hhhhhhhceeeCC
Confidence            9998855545554

>PLN03123 poly [ADP-ribose] polymerase; Provisional

Probab=97.65  E-value=0.00011  Score=86.89  Aligned_cols=88  Identities=14%  Similarity=0.173  Sum_probs=74.9

Q ss_pred             CCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECC--CCCcHHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150          394 SNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGK--VRKTLNFLTALCSGAWIVSPNWLKESFREG  470 (542)
Q Consensus       394 s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k--~~RTlKfL~AIA~G~wIVSpsWL~dSlk~G  470 (542)
                      .+.++++|.++|-.+.. +.++++.|+.+||++...+ ..|||||+..  -++..|+-.|-..|++||+.+||.+|.+.+
T Consensus       392 ~~l~~~~i~i~G~~~~~-~~~~k~~Ie~~GG~~s~~v~~~~t~l~tt~e~~k~~~kv~qAk~~~ipIVsedwL~ds~~~~  470 (981)
T PLN03123        392 EFLGDLKVSIVGASKEK-VTEWKAKIEEAGGVFHATVKKDTNCLVVCGELDDEDAEMRKARRMKIPIVREDYLVDCFKKK  470 (981)
T ss_pred             CCcCCeEEEEecCCCCc-HHHHHHHHHhcCCEEeeeccCCceEEEccHHhhhcchHHHHHHhcCCCcccHHHHHHHHhcc
Confidence            44567999999977654 4689999999999999997 7899999875  356678889999999999999999999999


Q ss_pred             CCCCCCCcccCC
Q 009150          471 RFVDESSYMLND  482 (542)
Q Consensus       471 k~LdEe~YeL~d  482 (542)
                      ..+++..|.+..
T Consensus       471 ~~~p~~~y~~~~  482 (981)
T PLN03123        471 KKLPFDKYKLEA  482 (981)
T ss_pred             ccCcchhhhhcc
Confidence            988888886653

>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]

Probab=97.55  E-value=0.00024  Score=73.40  Aligned_cols=82  Identities=17%  Similarity=0.163  Sum_probs=69.2

Q ss_pred             ceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchh
Q 009150          127 KYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEG  206 (542)
Q Consensus       127 ~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~  206 (542)
                      .-+++..+.    ++++||||..+  .-     .-|+.+||++.+||-|+.=+|+.||...+-++|..|+|+++-+....
T Consensus        35 ve~~v~~~~----~~~~iiacGsi--aG-----nvikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~  103 (352)
T COG3053          35 VEYFVAIYR----DNEEIIACGSI--AG-----NVIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYAA  103 (352)
T ss_pred             ceEEEEEEc----CCCcEEEeccc--cc-----ceeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhHHH
Confidence            344555554    56899988533  21     22899999999999999999999999999999999999999999999


Q ss_pred             hhhhcCccccccc
Q 009150          207 FWHKQDTSADTAV  219 (542)
Q Consensus       207 Fw~KqGF~~~~~~  219 (542)
                      ||+-+||..+...
T Consensus       104 lFk~~GF~~i~~~  116 (352)
T COG3053         104 LFKQCGFSEIASA  116 (352)
T ss_pred             HHHhCCceEeecc
Confidence            9999999998755

>KOG1929 consensus Nucleotide excision repair factor NEF2, RAD4/CUT5 component [Replication, recombination and repair]

Probab=97.54  E-value=0.00042  Score=80.19  Aligned_cols=141  Identities=16%  Similarity=0.127  Sum_probs=105.3

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCC
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVD  474 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~Ld  474 (542)
                      -.+.+|++||+...+ |.++..+|-++||...... ..++|++.....-|.||-+|+-..++||+.+|+++|...+..++
T Consensus       104 ~~~~~Vc~tgl~~~e-K~ei~~~v~k~gg~~~~~L~s~v~~~~~~~~~~~~kYe~al~wn~~v~~~~w~~~s~~~~~~~~  182 (811)
T KOG1929|consen  104 FFGLKVCLTGLSGDE-KSEIKILVPKHGGTLHRSLSSDVNSLKILPEVKTEKYEQALKWNIPVVSDDWLFDSIEKTAVLE  182 (811)
T ss_pred             ccceEEEecccchHH-HHHHHHHhhhcccEEehhhhhhhheeeeccccchHHHHHHHhhCCccccHHHHhhhhccccccc
Confidence            346899999999876 6889999999999999887 67788877776667999999999999999999999999999999


Q ss_pred             CCCcccCCch--hhh--------------------hcCCChHHHHHH----hhcCCCCCCCCeEEEEeCCCCCCHHHHHH
Q 009150          475 ESSYMLNDDD--YVL--------------------KYRSELKDSVLR----AKARPGGLLRGYNIIMAAHIQPPIKTLSA  528 (542)
Q Consensus       475 Ee~YeL~d~~--~e~--------------------~~g~~L~~sl~r----Ar~~~~~LF~G~~f~Is~~v~p~~~~L~~  528 (542)
                      ++.|++....  .+.                    .|+.+  ....+    +......+..++.++.+......++.+.+
T Consensus       183 ~~~~e~~~~~~~is~~~~~~~~~~~~~~~s~t~~~~~~~~--~~~~n~~~~p~~a~~~~~~~c~v~~s~~~~~~~s~l~r  260 (811)
T KOG1929|consen  183 TKPYEGAPVAEAISGPIGSTLPKEILDGDSRTANDTWSTS--KVVTNIKVLPFQAKIGNLDDCLVETSGTTSRNRSALSR  260 (811)
T ss_pred             ccccccccccceeccCCccccccccccccchhhhccccch--hcccccccchhhhhccccccceeeecCCcccchhHhHH
Confidence            9999987621  000                    01000  00000    00001225667788887766667899999


Q ss_pred             HHHhCCCEEec
Q 009150          529 IVRSAGGNVSS  539 (542)
Q Consensus       529 LIeagGG~V~~  539 (542)
                      ++..+||.-+.
T Consensus       261 ~~~~g~~~~~~  271 (811)
T KOG1929|consen  261 LSNNGGSLRFL  271 (811)
T ss_pred             hhhcccceeec
Confidence            99999887543

>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]

Probab=97.39  E-value=0.00016  Score=56.40  Aligned_cols=44  Identities=20%  Similarity=0.225  Sum_probs=40.5

Q ss_pred             eeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCc
Q 009150          165 AAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDT  213 (542)
Q Consensus       165 ~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF  213 (542)
                      ++|++++||+|||+.|++++.+.++..|+.     ....+..||.++||
T Consensus        87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~-----~~~~~~~~~~~~~~  130 (156)
T COG0454          87 LYVLPEYRGKGIGSALLEAALEWARKRGIS-----LNRLALEVYEKNGF  130 (156)
T ss_pred             EEecchhhccchHHHHHHHHHHHHHHcCce-----ehHHHHHHHHhcCC
Confidence            999999999999999999999999998887     44458999999999

>COG2388 Predicted acetyltransferase [General function prediction only]

Probab=97.30  E-value=0.00037  Score=61.68  Aligned_cols=60  Identities=15%  Similarity=0.161  Sum_probs=53.6

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD  201 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~  201 (542)
                      ++|..+|.++|....++  ..-|.|.-|++.+||||+|++|+.++.+.+++.|++-|=++.+
T Consensus        22 ~~G~~~~e~~y~~~~~~--~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kiiP~Csf   81 (99)
T COG2388          22 DEGEVIGEATYYDRGEN--LIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKIIPLCSF   81 (99)
T ss_pred             cCCcEEEEEEEecCCCC--EEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeEcccchH
Confidence            67889999988777655  6669999999999999999999999999999999998877774

>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]

Probab=97.24  E-value=0.00042  Score=67.74  Aligned_cols=79  Identities=15%  Similarity=0.255  Sum_probs=63.5

Q ss_pred             CCcEEEEEEeeeccCCCc--------eeEeeeeeeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEc---cccchhhh
Q 009150          141 DDVVVAAITYQIVPADTQ--------YAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG-IRTIFCWG---DKESEGFW  208 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~--------~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~G-I~~I~l~a---~~~A~~Fw  208 (542)
                      ++..||++.......-++        +.+|-++.|-+.||.+|||+.|+++++++..... ++.|++.+   ++.|..||
T Consensus        63 ~~~~v~a~~~k~~~~~~~~~r~~~~~~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y  142 (187)
T KOG3138|consen   63 NEIAVGAVACKLIKFVQNAKRLFGNRVIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFY  142 (187)
T ss_pred             ccccccceeeeehhhhhhhhhhhccceeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHH
Confidence            445666666655552222        5889999999999999999999999999999988 77775543   44599999


Q ss_pred             hhcCccccccc
Q 009150          209 HKQDTSADTAV  219 (542)
Q Consensus       209 ~KqGF~~~~~~  219 (542)
                      ++.||+.+...
T Consensus       143 ~~~gF~~~~~~  153 (187)
T KOG3138|consen  143 EKRGFEIVERL  153 (187)
T ss_pred             HhcCceEeecc
Confidence            99999999876

>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]

Probab=96.91  E-value=0.0022  Score=61.41  Aligned_cols=126  Identities=12%  Similarity=0.102  Sum_probs=85.6

Q ss_pred             chhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeecc-CC-C-ceeEee
Q 009150           87 CSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVP-AD-T-QYAEVP  163 (542)
Q Consensus        87 ~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~-~d-~-~~aeI~  163 (542)
                      .|.|+..|...+.---|-+.|        ..|.-.-.|-..--.-.+-++++|.+|+|||-+.--.+- |+ . --+.|.
T Consensus         4 iR~ar~~DL~~mQ~~Nl~~lp--------ENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhIt   75 (193)
T KOG3235|consen    4 IRRARPDDLLEMQHCNLLNLP--------ENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHIT   75 (193)
T ss_pred             cccCCHHHHHHhhhcccccCc--------HHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeE
Confidence            456677777766654444444        333322222221122234456667899999987666554 22 2 367899


Q ss_pred             eeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhh-hcCcccccccc
Q 009150          164 LAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWH-KQDTSADTAVS  220 (542)
Q Consensus       164 ~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~-KqGF~~~~~~~  220 (542)
                      .+||..+||+.|||++||+.....+.+ .+-..|-|...+   .|.+.|+ ..||.+.+...
T Consensus        76 SlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl~F~v~eve~  137 (193)
T KOG3235|consen   76 SLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTLGFVVCEVEP  137 (193)
T ss_pred             EeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhhccceEEeeccc
Confidence            999999999999999999987776665 467778777666   4889999 99999887653

>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]

Probab=96.91  E-value=0.00077  Score=77.54  Aligned_cols=72  Identities=18%  Similarity=0.185  Sum_probs=55.5

Q ss_pred             EeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEE-EEccc-cchhhhhhcCccccccc-cccccCCCCCCCceeEEE
Q 009150          161 EVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIF-CWGDK-ESEGFWHKQDTSADTAV-SLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       161 eI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~-l~a~~-~A~~Fw~KqGF~~~~~~-~~~~~~~~~~c~ea~lm~  237 (542)
                      -|.-.||+|++|++|||+++++++.++++ .|+..+- -++.. .=-.||.||||.++.-- .|-+.=+++    +++|.
T Consensus       533 RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG~t~~L~rFW~rnGF~pVhls~~rn~~SGey----s~i~l  607 (758)
T COG1444         533 RIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFGYTEELLRFWLRNGFVPVHLSPTRNASSGEY----TAIVL  607 (758)
T ss_pred             eEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeeccCCCHHHHHHHHHcCeEEEEecCccCcCCCce----eEEEE
Confidence            47789999999999999999999999997 4555551 12222 35789999999999865 555666776    66666

>KOG3524 consensus Predicted guanine nucleotide exchange factor (PEBBLE) [Signal transduction mechanisms]

Probab=96.88  E-value=0.001  Score=75.01  Aligned_cols=122  Identities=18%  Similarity=0.325  Sum_probs=92.1

Q ss_pred             CCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCC
Q 009150          397 KCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDE  475 (542)
Q Consensus       397 k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdE  475 (542)
                      +....+|||+....+  .+..++..|||.|..+. ..+||+|+.... ..|+-.|+.. .+++.|.||.++++...|++-
T Consensus       120 ~~vvlcfTg~rkk~e--~lv~lvh~mgg~irkd~nsktthli~n~s~-gek~~~a~t~-~~~~rp~wv~~aw~~rn~~yf  195 (850)
T KOG3524|consen  120 KDVVMCFTGERKKKE--ELVDLVHYMGGSIRKDTNSKTTHLIANKVE-GEKQSIALVG-VPTMRPDWVTEAWKHRNDSYF  195 (850)
T ss_pred             cCceeeeeccchhhH--HHHHHHHHhcceeEeeeccCceEEEeeccc-ceEEEEEeec-cceechHhhhhhhcCcchhhh
Confidence            346788999987653  78999999999999886 899999999865 4566666555 999999999999998877642


Q ss_pred             CCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEec
Q 009150          476 SSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSS  539 (542)
Q Consensus       476 e~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~  539 (542)
                         .|..+.+.              ..++...|.|..|++.+.-+-..+.+.+.++--||....
T Consensus       196 ---da~~~~f~--------------d~hrl~~feg~~~~f~gF~~ee~~~m~~sle~~gg~~a~  242 (850)
T KOG3524|consen  196 ---DAMEPCFV--------------DKHRLGVFEGLSLFFHGFKQEEIDDMLRSLENTGGKLAP  242 (850)
T ss_pred             ---hhhccchh--------------hhhccccccCCeEeecCCcHHHHHHHHHHHHhcCCcccC
Confidence               22222211              223467899999999877655567788888888987653

>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]

Probab=96.83  E-value=0.0033  Score=60.04  Aligned_cols=81  Identities=15%  Similarity=0.117  Sum_probs=64.0

Q ss_pred             CCCCcEEEEEEeeeccCCCce-eEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE---EccccchhhhhhcCcc
Q 009150          139 DDDDVVVAAITYQIVPADTQY-AEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC---WGDKESEGFWHKQDTS  214 (542)
Q Consensus       139 ~~~~~VIg~i~~~i~~~d~~~-aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l---~a~~~A~~Fw~KqGF~  214 (542)
                      +.+++|.|-|.+.+.-.+++. +-+--++|.|+||+.|+|+.||+.+++-....+-..|-|   ..++-|..||+|+||.
T Consensus        48 ~p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkLGY~  127 (173)
T KOG3234|consen   48 APTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKLGYS  127 (173)
T ss_pred             CCCCceEEEEeeeccccCcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHhcCce
Confidence            356789998888776655432 447779999999999999999999999988876555533   3344599999999999


Q ss_pred             ccccc
Q 009150          215 ADTAV  219 (542)
Q Consensus       215 ~~~~~  219 (542)
                      +...+
T Consensus       128 ~YR~V  132 (173)
T KOG3234|consen  128 VYRTV  132 (173)
T ss_pred             EEEee
Confidence            98876

>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length

Probab=96.48  E-value=0.035  Score=51.45  Aligned_cols=107  Identities=21%  Similarity=0.267  Sum_probs=64.1

Q ss_pred             hhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeec
Q 009150           89 KSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVS  168 (542)
Q Consensus        89 ~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~  168 (542)
                      -..+-|...||    |--.        .++|... ++..+.-..--+     +++++|++-..+.-   +.+.|..++|.
T Consensus        12 ~Qd~iDL~KIw----p~~~--------~~~l~~~-l~~~~~l~aArF-----NdRlLgAv~v~~~~---~~~~L~~l~VR   70 (128)
T PF12568_consen   12 EQDRIDLAKIW----PQQD--------PEQLEQW-LDEGHRLFAARF-----NDRLLGAVKVTISG---QQAELSDLCVR   70 (128)
T ss_dssp             HHHHHHHHHH-----TTS-------------------SSEEEEEEEE-----TTEEEEEEEEEEET---TEEEEEEEEE-
T ss_pred             HHHHHHHHHhC----CCCC--------HHHHHHH-hccCCeEEEEEe-----chheeeeEEEEEcC---cceEEeeEEEe
Confidence            34556777888    5555        5556555 444443333333     67999999666642   58899999999


Q ss_pred             cCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc-------chhhhhhcCcccccc
Q 009150          169 SIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE-------SEGFWHKQDTSADTA  218 (542)
Q Consensus       169 ~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~-------A~~Fw~KqGF~~~~~  218 (542)
                      +-=|++|+|..|++++.+++  -+|.+..+.....       -.+|-.-+||....+
T Consensus        71 evTRrRGVG~yLlee~~rq~--p~i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~~~  125 (128)
T PF12568_consen   71 EVTRRRGVGLYLLEEVLRQL--PDIKHWWLADEGVEPQDRAVMAAFMQACGFSAQSD  125 (128)
T ss_dssp             TT-SSSSHHHHHHHHHHHHS---S--EEEE--TT-S--THHHHHHHHHHHT-EE-SS
T ss_pred             eccccccHHHHHHHHHHHHC--CCCcEEEEecCCCcccchHHHHHHHHHcCccccCC
Confidence            99999999999999999998  4567766655532       348999999977654

It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.

>COG3981 Predicted acetyltransferase [General function prediction only]

Probab=96.11  E-value=0.014  Score=56.47  Aligned_cols=73  Identities=18%  Similarity=0.195  Sum_probs=55.7

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeee--eeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcC
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPL--AAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQD  212 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~--~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqG  212 (542)
                      +|+++||.|.++-.=.+.-+-+-+|  ..|.|+.||+|+|+.+++-.++.++++||.+|.+.++.+   |..-=.++|
T Consensus        76 ~d~~ivG~i~lRh~Ln~~ll~~gGHIGY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI~~NG  153 (174)
T COG3981          76 EDGQIVGFINLRHQLNDFLLEEGGHIGYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVIEANG  153 (174)
T ss_pred             cCCcEEEEEEeeeecchHHHhcCCcccceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHHHhcC
Confidence            4789999998776543321111222  479999999999999999999999999999998888873   555555555

>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]

Probab=96.05  E-value=0.0088  Score=63.51  Aligned_cols=58  Identities=17%  Similarity=0.153  Sum_probs=54.6

Q ss_pred             ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccc
Q 009150          158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADT  217 (542)
Q Consensus       158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~  217 (542)
                      ..+.|..+|+.|+|||+|.-++|+.+.++..++.|+.-.+|...  +.+||+|-||+.-.
T Consensus        69 ~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~P~--s~~iYrKfGye~as  126 (389)
T COG4552          69 PTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALHPF--SGGIYRKFGYEYAS  126 (389)
T ss_pred             eccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEeccC--chhhHhhccccccc
Confidence            67889999999999999999999999999999999999999998  89999999998644

>PRK06195 DNA polymerase III subunit epsilon; Validated

Probab=95.83  E-value=0.035  Score=57.91  Aligned_cols=73  Identities=14%  Similarity=0.061  Sum_probs=59.3

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCC--------CCcHHHHHHHhc-----CCeEeCH
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKV--------RKTLNFLTALCS-----GAWIVSP  460 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~--------~RTlKfL~AIA~-----G~wIVSp  460 (542)
                      +..+-+|+|||....-.|.+++++++.+||.|.+++ .+||+||++..        .-+-|+-.|...     |++|++.
T Consensus       220 ~l~g~~~vfTG~l~~~~R~~~~~~~~~~Gg~v~~sVs~~t~~lV~G~~~~~~~~~~~~~~K~~kA~~l~~~g~~i~ii~E  299 (309)
T PRK06195        220 AFKEEVVVFTGGLASMTRDEAMILVRRLGGTVGSSVTKKTTYLVTNTKDIEDLNREEMSNKLKKAIDLKKKGQNIKFLNE  299 (309)
T ss_pred             cccCCEEEEccccCCCCHHHHHHHHHHhCCEecCCcccCceEEEECCCcchhhcccCcChHHHHHHHHHhCCCCcEEecH
Confidence            467789999998765558899999999999999998 78999999852        235688888776     9999998


Q ss_pred             HHHHHHH
Q 009150          461 NWLKESF  467 (542)
Q Consensus       461 sWL~dSl  467 (542)
                      +=+.+-+
T Consensus       300 ~~f~~l~  306 (309)
T PRK06195        300 EEFLQKC  306 (309)
T ss_pred             HHHHHHH
Confidence            7555544

>KOG0966 consensus ATP-dependent DNA ligase IV [Replication, recombination and repair]

Probab=95.82  E-value=0.022  Score=65.66  Aligned_cols=76  Identities=20%  Similarity=0.335  Sum_probs=60.9

Q ss_pred             EEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEE--CCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCCCCc
Q 009150          402 MLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVT--GKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSY  478 (542)
Q Consensus       402 lfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt--~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdEe~Y  478 (542)
                      +|+|...+..+..++++|...||.++.++ +..||.|+  +.. .|..--.|+++++-||.|+||.+|.+..++++-.++
T Consensus       641 Vlsgt~~~~tk~~le~~ivenGG~iv~nv~p~~~~ci~~a~~e-t~~vk~~~~~~~cdVl~p~Wlldcc~~~~l~p~~P~  719 (881)
T KOG0966|consen  641 VLSGTSETHTKAKLEEIIVENGGKIVQNVGPSDTLCIATAGKE-TTRVKAQAIKRSCDVLKPAWLLDCCKKQRLLPWLPR  719 (881)
T ss_pred             EecCCcccccHHHHHHHHHHcCCEEEEcCCCCCcceEEecccc-chHHHHHHHhccCceeeHHHHHHHHhhhhccccccH
Confidence            35777766656789999999999999887 66999885  443 345556778889999999999999999998776653

>PRK06063 DNA polymerase III subunit epsilon; Provisional

Probab=95.62  E-value=0.037  Score=58.04  Aligned_cols=70  Identities=16%  Similarity=0.064  Sum_probs=59.7

Q ss_pred             CCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCC-CCcHHHHHHHhcCCeEeCHHHHHHHH
Q 009150          397 KCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKV-RKTLNFLTALCSGAWIVSPNWLKESF  467 (542)
Q Consensus       397 k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~-~RTlKfL~AIA~G~wIVSpsWL~dSl  467 (542)
                      .+-+|+|||-... .|.++++.++.+||.|.+.+ .+++.||++.. ..+-|.-.|-..|++|++.+=+.+-+
T Consensus       234 ~g~~~v~TG~l~~-~R~e~~~~~~~~G~~v~~sVs~~t~~lv~g~~~~~ssK~~kA~~~gi~ii~e~~f~~ll  305 (313)
T PRK06063        234 QGMRVALSAEVSR-THEELVERILHAGLAYSDSVDRDTSLVVCNDPAPEQGKGYHARQLGVPVLDEAAFLELL  305 (313)
T ss_pred             CCCEEEEecCCCC-CHHHHHHHHHHcCCEecCccccCccEEEECCCCCcccHHHHHHHcCCccccHHHHHHHH
Confidence            4679999997764 57899999999999999998 88999999863 43579999999999999998777655

>PRK14351 ligA NAD-dependent DNA ligase LigA; Provisional

Probab=95.44  E-value=0.055  Score=62.50  Aligned_cols=75  Identities=12%  Similarity=0.098  Sum_probs=64.3

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHc
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFRE  469 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~  469 (542)
                      +..+..|+|||....-.|.+++++|+.+||+|.+++ .+|++||++...-.-|+-.|-..|++|++.+-+.+-++.
T Consensus       609 ~l~g~~~v~TG~l~~~~R~~~~~~i~~~Gg~v~~sVs~kt~~Lv~G~~~g~sKl~kA~~lgi~ii~E~~f~~ll~~  684 (689)
T PRK14351        609 ALDGLTFVFTGSLSGYTRSEAQELVEAHGGNATGSVSGNTDYLVVGENPGQSKRDDAEANDVPTLDEEEFEELLAE  684 (689)
T ss_pred             CCCCcEEEEccCCCCCCHHHHHHHHHHcCCEEcCCcCCCccEEEEcCCCChhHHHHHHHCCCeEecHHHHHHHHHh
Confidence            466799999998866558899999999999999998 789999999754346999999999999999988876664

>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]

Probab=95.43  E-value=0.015  Score=63.59  Aligned_cols=50  Identities=22%  Similarity=0.345  Sum_probs=46.8

Q ss_pred             ccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccc
Q 009150          168 SSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADT  217 (542)
Q Consensus       168 ~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~  217 (542)
                      ...+|.+|+|+.||.+++.-+++.|..+|...+.-++..||+|.||+..+
T Consensus       459 ~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgiG~ReYy~k~GY~~~g  508 (515)
T COG1243         459 EDEWQHRGYGRELLEEAERIAREEGAKKILVISGIGVREYYRKLGYELDG  508 (515)
T ss_pred             cchhhcccHHHHHHHHHHHHHHhhccccEEEEecccHHHHHHHhCccccC
Confidence            46799999999999999999999999999999999999999999998765

>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B

Probab=95.38  E-value=0.059  Score=55.51  Aligned_cols=75  Identities=15%  Similarity=0.097  Sum_probs=58.1

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTA  218 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~  218 (542)
                      +|+||+++.....+.+  .+||. .+..++|||||+++.+...+.....+.|+.=.+...+..|...=+|+||+-..+
T Consensus       173 ~~~iVs~~~s~~~~~~--~~EI~-I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~WDc~N~~S~~lA~kLGf~~~~~  247 (265)
T PF12746_consen  173 DGEIVSGCSSYFVYEN--GIEID-IETHPEYRGKGLATAVAAAFILECLENGLYPSWDCHNLASIALAEKLGFHFDFE  247 (265)
T ss_dssp             TTEEEEEEEEEEEETT--EEEEE-EEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE-EESSHHHHHHHHHCT--EEEE
T ss_pred             CCEEEEEEEEEEEECC--EEEEE-EEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCeeCCCHHHHHHHHHcCCcccce
Confidence            5678876666666655  67764 566999999999999999999999999999998887778999999999987653

>PF00533 BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IPR001357 The BRCT domain (after the C_terminal domain of a breast cancer susceptibility protein) is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage [], for example as found in the breast cancer DNA-repair protein BRCA1

Probab=95.36  E-value=0.026  Score=45.31  Aligned_cols=38  Identities=16%  Similarity=0.384  Sum_probs=31.9

Q ss_pred             CCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          504 PGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       504 ~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      +.++|+|+.|||.......++.|+++|+..||++...+
T Consensus         2 ~~~~F~g~~f~i~~~~~~~~~~l~~~i~~~GG~v~~~~   39 (78)
T PF00533_consen    2 KPKIFEGCTFCISGFDSDEREELEQLIKKHGGTVSNSF   39 (78)
T ss_dssp             STTTTTTEEEEESSTSSSHHHHHHHHHHHTTEEEESSS
T ss_pred             CCCCCCCEEEEEccCCCCCHHHHHHHHHHcCCEEEeec
Confidence            46799999999966666678999999999999996543

The domain is an approximately 100 amino acid tandem repeat, which appears to act as a phospho-protein binding domain []. A chitin biosynthesis protein from yeast also seems to belong to this group. ; GO: 0005622 intracellular; PDB: 3L46_A 3AL3_A 3AL2_A 1WF6_A 3II6_X 2NTE_B 3FA2_A 2R1Z_A 2COK_A 2K7F_A ....

>PRK07956 ligA NAD-dependent DNA ligase LigA; Validated

Probab=95.16  E-value=0.074  Score=61.25  Aligned_cols=74  Identities=16%  Similarity=0.169  Sum_probs=63.5

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREG  470 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~G  470 (542)
                      ..+.+|+|||....-.|++++++++.+||.|.+++ ..|+.||++... +-|+-.|-..|++|++.+-+.+.++++
T Consensus       591 ~~g~~~v~TG~l~~~~R~e~~~~i~~~G~~v~~sVs~kt~~lv~G~~~-gsK~~kA~~lgI~ii~E~~f~~~l~~~  665 (665)
T PRK07956        591 LAGKTVVLTGTLEQLSRDEAKEKLEALGAKVSGSVSKKTDLVVAGEAA-GSKLAKAQELGIEVLDEEEFLRLLGEG  665 (665)
T ss_pred             ccccEEEEeCCCCCCCHHHHHHHHHHcCCEEeCcccCCCCEEEECCCC-ChHHHHHHHcCCeEEcHHHHHHHHhcC
Confidence            56799999998866458899999999999999998 789999999743 479999999999999999888876543

>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish

Probab=94.74  E-value=0.036  Score=49.13  Aligned_cols=72  Identities=22%  Similarity=0.152  Sum_probs=45.6

Q ss_pred             cEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCC-----cEEEEEccccchhhhhhcCcc
Q 009150          143 VVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGI-----RTIFCWGDKESEGFWHKQDTS  214 (542)
Q Consensus       143 ~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI-----~~I~l~a~~~A~~Fw~KqGF~  214 (542)
                      ...||+.....+++...+++.-|||+++.||+|+|..|++.+.+.-.++=.     ..+.-|=+..|.|+|.+.|+.
T Consensus        18 ~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~~~L~Wrsr~~n~~n~Wyf~rs~Gs~~~~~~~   94 (99)
T cd04264          18 GYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRDFPKLFWRSRKTNPINPWYFKRSDGSFKNGQWK   94 (99)
T ss_pred             CceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhCCceEEEeCCCCcccceEEEeeEEEEEcCCeE
Confidence            344444332222235799999999999999999999999998877433211     111222223467777776654

DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.

>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans

Probab=94.69  E-value=0.2  Score=49.00  Aligned_cols=91  Identities=20%  Similarity=0.243  Sum_probs=65.3

Q ss_pred             cccceeEEEeeecccCCCCcEEEEEEeeecc-----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 009150          124 LNGKYCTLLLKSSFMDDDDVVVAAITYQIVP-----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC  198 (542)
Q Consensus       124 ~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~-----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l  198 (542)
                      |+..|.=.+....   +.++||+...+..+.     +|.-+.+|+++-++|+|||+|+++.+-.-+.+.++..+-+-+. 
T Consensus        41 f~~~Y~l~~~~~K---gT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~~~N~~~-  116 (181)
T PF06852_consen   41 FDDDYWLVLTCLK---GTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSVDDNSVA-  116 (181)
T ss_pred             hccCeEEEEEEEc---CCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccCCCceee-
Confidence            5554533333322   567899988887665     3567999999999999999999976666667778776666555 


Q ss_pred             Eccccchhhhhh-cCcccccc
Q 009150          199 WGDKESEGFWHK-QDTSADTA  218 (542)
Q Consensus       199 ~a~~~A~~Fw~K-qGF~~~~~  218 (542)
                      .++..+..||+| .||...+.
T Consensus       117 ~~~~~~~~~w~k~~G~~~~~h  137 (181)
T PF06852_consen  117 QGNVKMSNFWHKMFGFDDYGH  137 (181)
T ss_pred             ecCHHHHHHHHHHhCCCCCcc
Confidence            455566677776 58777665

Note that some proteins in the entry contain more than one copy of this region.

>TIGR00575 dnlj DNA ligase, NAD-dependent

Probab=94.69  E-value=0.073  Score=61.16  Aligned_cols=66  Identities=18%  Similarity=0.186  Sum_probs=56.2

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHH
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNW  462 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsW  462 (542)
                      ..+-.|+|||......|.+++++++.+||+|.+++ .++++||++...- -|+-.|...|++|++.+.
T Consensus       585 l~gk~~v~TG~l~~~~R~~~~~~i~~~G~~v~~sVs~kt~~lv~G~~~g-sKl~kA~~lgi~ii~E~~  651 (652)
T TIGR00575       585 LAGKTFVLTGTLSQMSRDEAKELLENLGGKVASSVSKKTDYVIAGEKAG-SKLAKAQELGIPIINEEE  651 (652)
T ss_pred             ccCcEEEEeccCCCCCHHHHHHHHHHcCCEEeCCcCCCccEEEECCCCC-hHHHHHHHcCCcEechhh
Confidence            45679999998765558899999999999999998 7899999997443 499999999999998764

The member of this family from Treponema pallidum differs in having three rather than just one copy of the BRCT (BRCA1 C Terminus) domain (pfam00533) at the C-terminus. It is included in the seed.

>PRK14350 ligA NAD-dependent DNA ligase LigA; Provisional

Probab=94.58  E-value=0.11  Score=59.88  Aligned_cols=71  Identities=13%  Similarity=0.011  Sum_probs=60.1

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHH
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESF  467 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSl  467 (542)
                      ..+-.|+|||......|.+++++|+++||+|.+++ .+|++||++... .-|+--|-..|++|++.+.+.+-+
T Consensus       594 l~gktfV~TG~l~~~~R~e~~~lie~~Ggkv~ssVSkktd~LV~G~~a-GsKl~KA~~LGI~Ii~e~~f~~~l  665 (669)
T PRK14350        594 LFGKKFCITGSFNGYSRSVLIDKLTKKGAIFNTCVTKYLDFLLVGEKA-GLKLKKANNLGIKIMSLFDIKSYV  665 (669)
T ss_pred             cCCcEEEEecccCCCCHHHHHHHHHHcCCEEeccccCCCcEEEECCCC-CchHHHHHHcCCEEecHHHHHHHh
Confidence            55779999997655458899999999999999998 789999999643 358999999999999999887743

>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]

Probab=94.53  E-value=0.035  Score=53.16  Aligned_cols=68  Identities=13%  Similarity=0.103  Sum_probs=55.9

Q ss_pred             eEeeeeeeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEccccchhhhhhcCccccccc---cccccCCC
Q 009150          160 AEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG-IRTIFCWGDKESEGFWHKQDTSADTAV---SLKFCFPV  227 (542)
Q Consensus       160 aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~G-I~~I~l~a~~~A~~Fw~KqGF~~~~~~---~~~~~~~~  227 (542)
                      +-|..++|.|+||.||+|+.|+.+-++.|.+.- .++++|.+-.-=+.||++.||..++..   ..+..|.+
T Consensus       102 i~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvPFYEr~gFk~vgp~~~~~~~k~F~e  173 (190)
T KOG4144|consen  102 IHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVPFYERFGFKAVGPCAITVGSKTFME  173 (190)
T ss_pred             eeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccchhHhcCceeecccccccccchhHH
Confidence            559999999999999999999988777777665 467788888888999999999999874   44444544

>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]

Probab=94.25  E-value=0.14  Score=58.52  Aligned_cols=72  Identities=17%  Similarity=0.147  Sum_probs=62.3

Q ss_pred             CCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHH
Q 009150          394 SNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKES  466 (542)
Q Consensus       394 s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dS  466 (542)
                      ++-.+-.|+|||..+.-.|.+++..|++|||+|..++ .+++.||++..--+ |+--|...|+.|++.+++.+-
T Consensus       593 ~~l~gkt~V~TGtL~~~sR~eak~~le~lGakv~~SVSkktD~vvaG~~aGS-Kl~kA~eLgv~i~~E~~~~~l  665 (667)
T COG0272         593 SPLAGKTFVLTGTLEGMSRDEAKALLEALGAKVSGSVSKKTDYVVAGENAGS-KLAKAQELGVKIIDEEEFLAL  665 (667)
T ss_pred             cccCCCEEEEeccCCCCCHHHHHHHHHHcCCEEeceecccccEEEEcCCCCh-HHHHHHHcCCeEecHHHHHHh
Confidence            5567789999998876668899999999999999998 78888999975544 999999999999999998764

>smart00292 BRCT breast cancer carboxy-terminal domain

Probab=94.08  E-value=0.1  Score=40.81  Aligned_cols=36  Identities=19%  Similarity=0.402  Sum_probs=30.9

Q ss_pred             CCCCCeEEEEeC-CCCCCHHHHHHHHHhCCCEEeccC
Q 009150          506 GLLRGYNIIMAA-HIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       506 ~LF~G~~f~Is~-~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      ++|+|+.||+.+ .....++.++++|+.+||+++..+
T Consensus         1 ~~f~g~~~~~~g~~~~~~~~~l~~~i~~~Gg~~~~~~   37 (80)
T smart00292        1 KLFKGKVFVITGKFDKNERDELKELIEALGGKVTSSL   37 (80)
T ss_pred             CccCCeEEEEeCCCCCccHHHHHHHHHHcCCEEeccc
Confidence            479999999997 455678999999999999998754

>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2

Probab=93.91  E-value=0.072  Score=46.54  Aligned_cols=60  Identities=13%  Similarity=0.098  Sum_probs=50.6

Q ss_pred             CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc--ccchhhhhhcCcccc
Q 009150          157 TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD--KESEGFWHKQDTSAD  216 (542)
Q Consensus       157 ~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~--~~A~~Fw~KqGF~~~  216 (542)
                      ++++|+....--|+|||||+.+.++-.+.++|.++|+.--.=+.+  ..+...-++.||...
T Consensus        17 dqtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P~Y~hv~~~N~~~~r~~~~lg~~~~   78 (89)
T PF08444_consen   17 DQTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFPFYGHVDEDNEASQRLSKSLGFIFM   78 (89)
T ss_pred             cccccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCCeEeehHhccHHHHHHHHHCCCeec
Confidence            379999999999999999999999999999999999986533332  248888999999764

3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].

>COG5628 Predicted acetyltransferase [General function prediction only]

Probab=93.83  E-value=0.15  Score=47.11  Aligned_cols=84  Identities=12%  Similarity=0.104  Sum_probs=60.1

Q ss_pred             CCcEEEEEEeeecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCcccc
Q 009150          141 DDVVVAAITYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSAD  216 (542)
Q Consensus       141 ~~~VIg~i~~~i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~  216 (542)
                      +|.+||-+++.-.+   -.-.++ |..|.+-..||++|+|++..+.+....+  |+-.|+.+-.| -|..||+|--++..
T Consensus        45 ~~~~igf~l~L~~~~~~~~iD~~-~~efFIi~k~~~~GvGR~aaK~If~~~~--g~w~Va~i~EN~PA~~fwK~~~~t~~  121 (143)
T COG5628          45 GGLPVGFALVLDLAHSPTPIDRA-VAEFFIVRKHRRRGVGRAAAKAIFGSAW--GVWQVATVRENTPARAFWKRVAETYP  121 (143)
T ss_pred             CCceeeeeeeecccCCCCccccc-chheEeeehhhccchhHHHHHHHHHHhh--ceEEEEEeccCChhHHHHHhhhcccc
Confidence            56788877665544   122477 8899999999999999999999988765  56777666665 49999999766543


Q ss_pred             c--cccccccCCC
Q 009150          217 T--AVSLKFCFPV  227 (542)
Q Consensus       217 ~--~~~~~~~~~~  227 (542)
                      -  +.++-.-+|+
T Consensus       122 i~~E~r~d~~~d~  134 (143)
T COG5628         122 VVEEDRQDARWDG  134 (143)
T ss_pred             cchhhhhcccCCC
Confidence            3  2244444555

>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]

Probab=93.65  E-value=0.2  Score=46.97  Aligned_cols=62  Identities=21%  Similarity=0.224  Sum_probs=56.1

Q ss_pred             ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-----cchhhhhhcCccccccc
Q 009150          158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-----ESEGFWHKQDTSADTAV  219 (542)
Q Consensus       158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-----~A~~Fw~KqGF~~~~~~  219 (542)
                      .|.||.-..|....||+|+|++|+..+..+++..|...+-|-.+-     .|..|---.||.++++.
T Consensus        83 ~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaalGF~eVG~a  149 (167)
T COG3818          83 NFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAALGFHEVGQA  149 (167)
T ss_pred             ceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhcCceEccce
Confidence            499999999999999999999999999999999999999776554     38899999999999865

>KOG2481 consensus Protein required for normal rRNA processing [RNA processing and modification]

Probab=93.55  E-value=0.086  Score=58.35  Aligned_cols=77  Identities=19%  Similarity=0.349  Sum_probs=59.0

Q ss_pred             CeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-----------CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHH
Q 009150          398 CFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-----------STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKES  466 (542)
Q Consensus       398 ~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-----------~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dS  466 (542)
                      ++.+.++--.+   ++.|.-+|+.+||.|.-+.           +.+||=|+..+.-+.+     ..|---|.|+||.||
T Consensus       330 glkFfl~reVP---resL~fiI~s~GG~V~wd~~~~g~~~~~~d~~ITH~IvDrP~~~~~-----v~gR~YvQPQWvfDs  401 (570)
T KOG2481|consen  330 GLKFFLNREVP---RESLEFIIRSFGGKVSWDPLGIGATYDESDERITHQIVDRPGQQTS-----VIGRTYVQPQWVFDS  401 (570)
T ss_pred             cceeeeeccCc---hHHHHHHHHHcCCceecCccCCCCcccccccceeeeeecccCccce-----eeeeeeecchhhhhh
Confidence            45666654444   4578999999999998662           4579999998765444     346677999999999


Q ss_pred             HHcCCCCCCCCcccCC
Q 009150          467 FREGRFVDESSYMLND  482 (542)
Q Consensus       467 lk~Gk~LdEe~YeL~d  482 (542)
                      +.++.+++.+.|....
T Consensus       402 vNar~llpt~~Y~~G~  417 (570)
T KOG2481|consen  402 VNARLLLPTEKYFPGK  417 (570)
T ss_pred             ccchhhccHhhhCCCc
Confidence            9999999998887554

>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]

Probab=93.01  E-value=0.19  Score=48.06  Aligned_cols=61  Identities=13%  Similarity=-0.055  Sum_probs=50.9

Q ss_pred             ceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCcccccc
Q 009150          158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTSADTA  218 (542)
Q Consensus       158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~~~~~  218 (542)
                      -.+|+.-+--.|..||+|||+..|...+.++.+ +++.+.......   -+..||+|.+|+....
T Consensus       106 ~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~  170 (185)
T KOG4135|consen  106 ITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFY  170 (185)
T ss_pred             eeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheeeee
Confidence            467777777789999999999999999999987 488888777633   4999999999987654

>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=92.77  E-value=0.049  Score=62.08  Aligned_cols=88  Identities=25%  Similarity=0.348  Sum_probs=69.5

Q ss_pred             CCCeEEEEcccCChhh---HHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcC-CeEeCHHHHHHHHHcC
Q 009150          396 GKCFRIMLMNIADDSK---KVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSG-AWIVSPNWLKESFREG  470 (542)
Q Consensus       396 ~k~~rVlfSG~~de~k---k~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G-~wIVSpsWL~dSlk~G  470 (542)
                      .+...++|||..+..-   +...-.+...+|..+..++ ..+||+|+-++ +|.|...|...+ ++||.+.||..|++.-
T Consensus       442 ~~~~~~vfSg~~P~~~~~~~s~~~~~~~~~g~vs~~~~~~~~th~i~~~~-gt~k~~~a~~~~~~~Vv~~~wl~~~~e~w  520 (635)
T KOG0323|consen  442 LKGSQIVFSGLHPTGSTDESADILGVAQQLGAVSAPDVSDKTTHLIAANA-GTKKVYKAVVSGSAKVVNAAWLWRSLEKW  520 (635)
T ss_pred             hhccceeecccccCcCCcchhhhhhhhhcccceecccccchhhhHHhhcc-CcceeeccccccceeEechhHHHHHHHHh
Confidence            3467889999775431   2334456677888777776 88999999885 588988888877 9999999999999999


Q ss_pred             CCCCCCCcccCCch
Q 009150          471 RFVDESSYMLNDDD  484 (542)
Q Consensus       471 k~LdEe~YeL~d~~  484 (542)
                      ..++|..|-+.+..
T Consensus       521 ~~v~ek~~~l~~~~  534 (635)
T KOG0323|consen  521 GKVEEKLEPLDDDQ  534 (635)
T ss_pred             cchhcccccccccc
Confidence            99999988876653

>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]

Probab=92.73  E-value=0.12  Score=55.20  Aligned_cols=92  Identities=22%  Similarity=0.298  Sum_probs=63.9

Q ss_pred             cccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeE-------e-----eeeee--c----cCccccChHHHHHHHHH
Q 009150          124 LNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAE-------V-----PLAAV--S----SIYQHKGVGRLLYLELR  185 (542)
Q Consensus       124 ~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~ae-------I-----~~~AV--~----~~~QgkGiG~~Lv~~l~  185 (542)
                      -|+-+||.+-+...  +.+.+||..-++-.-.+.-+-|       +     +--+|  +    ..||.||+|+.||++++
T Consensus       436 ANgGWETFlSYEDp--kqDILiGLLRLRkcs~~~~~~el~g~~SivRELHVYGs~vpv~~rDp~KfQHQG~GtLLmeEAE  513 (554)
T KOG2535|consen  436 ANGGWETFLSYEDP--KQDILIGLLRLRKCSKKTTRPELFGSQSIVRELHVYGSVVPVHSRDPTKFQHQGFGTLLMEEAE  513 (554)
T ss_pred             ccCChheeecccCc--chhHHHHHHHHhhcccccccchhcCccchheeeeecceeeecccCCchhhhhcchhhHHHHHHH
Confidence            36677777666543  4667777654443322211111       1     11222  2    36999999999999999


Q ss_pred             HHHHH-cCCcEEEEEccccchhhhhhcCccccc
Q 009150          186 KRLQS-VGIRTIFCWGDKESEGFWHKQDTSADT  217 (542)
Q Consensus       186 ~~lk~-~GI~~I~l~a~~~A~~Fw~KqGF~~~~  217 (542)
                      .-+++ .|-.+|...+.-+...||.|.||+..+
T Consensus       514 RIAr~EHgS~KiavISGVGtR~YY~klGY~LdG  546 (554)
T KOG2535|consen  514 RIAREEHGSGKIAVISGVGTRNYYRKLGYELDG  546 (554)
T ss_pred             HHHHHhcCCCceEEEeccchHHHHHhhCeeecC
Confidence            99986 588999999988999999999998754

>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish

Probab=92.65  E-value=0.12  Score=45.92  Aligned_cols=57  Identities=25%  Similarity=0.258  Sum_probs=39.2

Q ss_pred             ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCC-----cEEEEEccccchhhhhhcCcc
Q 009150          158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGI-----RTIFCWGDKESEGFWHKQDTS  214 (542)
Q Consensus       158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI-----~~I~l~a~~~A~~Fw~KqGF~  214 (542)
                      ...+|.-|||+++.||+|+|..|++.+++...++=.     ..+.-|=+..|.|+|++.|+.
T Consensus        33 ~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~~~L~Wrsr~~n~~n~Wyf~~s~Gs~~~~~~~   94 (99)
T cd04265          33 GVPYLDKFAVSSSAQGEGTGEALWRRLRRDFPKLFWRSRSTNPINPWYFKRCDGSFKNGHWT   94 (99)
T ss_pred             CceEEEEEEEchhhhhcChHHHHHHHHHhhCCceEEEeCCCCcccceEEEeeEEEEEcCCeE
Confidence            588999999999999999999999998877432211     001112222367777776654

This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.

>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2

Probab=91.99  E-value=0.48  Score=45.61  Aligned_cols=57  Identities=18%  Similarity=0.216  Sum_probs=46.8

Q ss_pred             CCCcEEEEEEeeecc-----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEE
Q 009150          140 DDDVVVAAITYQIVP-----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTI  196 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I  196 (542)
                      ..+++||-|++...-     ...+.+||-|+||+...|.++++.-|++|+..++...||-..
T Consensus        86 ~~~kLvgfIsaip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~qA  147 (162)
T PF01233_consen   86 SSKKLVGFISAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQA  147 (162)
T ss_dssp             TTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EE
T ss_pred             CCCEEEEEEccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCceee
Confidence            467899999887664     223789999999999999999999999999999999998664

3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....

>COG5163 NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]

Probab=91.81  E-value=0.17  Score=54.69  Aligned_cols=77  Identities=19%  Similarity=0.359  Sum_probs=58.6

Q ss_pred             CeEEEEcccCChhhHHHHHHHHHHcCcEEeccC------------CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHH
Q 009150          398 CFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG------------STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKE  465 (542)
Q Consensus       398 ~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~------------~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~d  465 (542)
                      ++.+.+|.-.+-   ..|.-+|...||.|..+.            ..+||-|+..+.-.-|     ..|..-+.|+||.+
T Consensus       353 ~f~FyisreVp~---dsLefiilscGG~V~~~p~~~~i~~~~~vD~~vth~i~drp~~~~k-----vegrtYiQPQw~fD  424 (591)
T COG5163         353 GFKFYISREVPG---DSLEFIILSCGGSVVGSPCEADIHVSEKVDEKVTHQIVDRPVMKNK-----VEGRTYIQPQWLFD  424 (591)
T ss_pred             ceEEEEeccccc---hHHHHHHHHcCCcccCchhhccCCchhhccchhhhhhccchhhhhh-----hcceeeechHHHHh
Confidence            455666554443   358889999999988652            4588988887653333     57888899999999


Q ss_pred             HHHcCCCCCCCCcccCC
Q 009150          466 SFREGRFVDESSYMLND  482 (542)
Q Consensus       466 Slk~Gk~LdEe~YeL~d  482 (542)
                      |+.+|.+...+.|....
T Consensus       425 siNkG~l~~~~~Y~~G~  441 (591)
T COG5163         425 SINKGKLACVENYCVGK  441 (591)
T ss_pred             hhccccchhhhhccccc
Confidence            99999999988887654

>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase

Probab=91.03  E-value=1.1  Score=45.39  Aligned_cols=60  Identities=22%  Similarity=0.233  Sum_probs=52.0

Q ss_pred             CceeEeeeeeeccCcccc--------C--------------------hHHHHHHHHHHHHHHcCCcEEEEEccccchhhh
Q 009150          157 TQYAEVPLAAVSSIYQHK--------G--------------------VGRLLYLELRKRLQSVGIRTIFCWGDKESEGFW  208 (542)
Q Consensus       157 ~~~aeI~~~AV~~~~Qgk--------G--------------------iG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw  208 (542)
                      ....||--|||+++++++        |                    +...|+..+.+++...||++++.++...-...+
T Consensus       109 ~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~l~r~l  188 (241)
T TIGR03694       109 SRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSSANGITHWYAIMEPRLARLL  188 (241)
T ss_pred             CceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHHHHCCCcEEEEEeCHHHHHHH
Confidence            368999999999999874        3                    446799999999999999999999998877788


Q ss_pred             hhcCcccc
Q 009150          209 HKQDTSAD  216 (542)
Q Consensus       209 ~KqGF~~~  216 (542)
                      .+.||...
T Consensus       189 ~r~G~~~~  196 (241)
T TIGR03694       189 SRFGIQFR  196 (241)
T ss_pred             HHhCCceE
Confidence            99998764

Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.

>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain

Probab=89.97  E-value=1.2  Score=38.89  Aligned_cols=57  Identities=19%  Similarity=0.023  Sum_probs=47.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEE
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCW  199 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~  199 (542)
                      .+|++||+...... .+  ..+.....+++++...+.|..|+-++.+.+.+.|++.+=+-
T Consensus        78 ~~g~~va~~~~~~~-~~--~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g  134 (142)
T PF13480_consen   78 DGGEPVAFALGFRH-GG--TLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFG  134 (142)
T ss_pred             ECCEEEEEEEEEEE-CC--EEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEEC
Confidence            36899998855443 34  66688999999999999999999999999999999887443

>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain

Probab=88.80  E-value=0.73  Score=34.97  Aligned_cols=32  Identities=19%  Similarity=0.466  Sum_probs=27.5

Q ss_pred             CeEEEEeCCC-CCCHHHHHHHHHhCCCEEeccC
Q 009150          510 GYNIIMAAHI-QPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       510 G~~f~Is~~v-~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      |+.||+++.. ...+..|+++|+..||++...+
T Consensus         1 ~~~~~i~g~~~~~~~~~l~~~i~~~Gg~v~~~~   33 (72)
T cd00027           1 GLTFVITGDLPSEERDELKELIEKLGGKVTSSV   33 (72)
T ss_pred             CCEEEEEecCCCcCHHHHHHHHHHcCCEEeccc
Confidence            5789998877 6779999999999999998754

The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.

>PRK13834 putative autoinducer synthesis protein; Provisional

Probab=87.72  E-value=4.2  Score=40.38  Aligned_cols=62  Identities=11%  Similarity=0.067  Sum_probs=51.2

Q ss_pred             CCceeEeeeeeeccCcccc---C----hHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccc
Q 009150          156 DTQYAEVPLAAVSSIYQHK---G----VGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADT  217 (542)
Q Consensus       156 d~~~aeI~~~AV~~~~Qgk---G----iG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~  217 (542)
                      ..+..||--|||+++++..   +    +...|+..+.+++...||++++.++...=+..+++.||....
T Consensus        96 ~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~~~r~l~r~G~~~~~  164 (207)
T PRK13834         96 HPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGYTEIVTATDLRFERILARAGWPMQR  164 (207)
T ss_pred             CCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHcCCCeEE
Confidence            3479999999999985322   2    557899999999999999999999987666778999988743

>COG5275 BRCT domain type II [General function prediction only]

Probab=87.66  E-value=2.2  Score=43.16  Aligned_cols=72  Identities=13%  Similarity=0.028  Sum_probs=56.0

Q ss_pred             CCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHH
Q 009150          394 SNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKE  465 (542)
Q Consensus       394 s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~d  465 (542)
                      ....+..|+|||....-.|...+.+++.+||.|+..+ ..+|.||.+.-.---|+-.+-..+++.+..+=++.
T Consensus       155 ~cL~G~~fVfTG~l~TlsR~~a~~lvk~yGgrvT~~pSskTtflvlGdnaGP~K~ekiKqlkIkaidEegf~~  227 (276)
T COG5275         155 ECLKGKVFVFTGDLKTLSRDDAKTLVKVYGGRVTAVPSSKTTFLVLGDNAGPSKMEKIKQLKIKAIDEEGFDS  227 (276)
T ss_pred             ccccccEEEEecccccccchhHHHHHHHhCCeeecccccceeEEEecCCCChHHHHHHHHhCCccccHHHHHH
Confidence            3456789999999987778889999999999999988 78899999874434566666667887776665544

>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]

Probab=85.02  E-value=0.67  Score=53.49  Aligned_cols=31  Identities=26%  Similarity=0.256  Sum_probs=28.2

Q ss_pred             eEeeeeeeccCccccChHHHHHHHHHHHHHH
Q 009150          160 AEVPLAAVSSIYQHKGVGRLLYLELRKRLQS  190 (542)
Q Consensus       160 aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~  190 (542)
                      |.|.-.||+|+||+.|+|++-++-+.++..-
T Consensus       615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG  645 (1011)
T KOG2036|consen  615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYFEG  645 (1011)
T ss_pred             ceEEEEEeccchhccCccHHHHHHHHHHHhc
Confidence            5689999999999999999999999998764

>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein

Probab=84.06  E-value=3  Score=38.73  Aligned_cols=56  Identities=16%  Similarity=0.231  Sum_probs=47.6

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC  198 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l  198 (542)
                      .+|++||+...-+.+.+  ..-|++|. ||++....+|+..+-.-++.+++.|++++.+
T Consensus        46 ~~~kLiav~v~D~l~~g--lSaVY~fy-DPd~~~~SlG~~~iL~eI~~a~~~~l~y~YL  101 (128)
T PF04377_consen   46 LDGKLIAVAVVDILPDG--LSAVYTFY-DPDYSKRSLGTYSILREIELARELGLPYYYL  101 (128)
T ss_pred             eCCeEEEEEEeecccch--hhheeeee-CCCccccCcHHHHHHHHHHHHHHcCCCEEee
Confidence            57899999887777755  44466655 9999999999999999999999999999865

In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	542
3sqd_A	219	Crystal Structure Of Human Ptip Brct56-Gamma H2ax C		5e-17
2etx_A	209	Crystal Structure Of Mdc1 Tandem Brct Domains Lengt		8e-15
3k05_A	200	The Crystal Structure Of Mdc1 Brct T2067d In Comple		2e-14
2ado_A	196	Crystal Structure Of The Brct Repeat Region From Th		2e-14
2azm_A	207	Crystal Structure Of The Mdc1 Brct Repeat In Comple		7e-11
3l40_A	220	Crystal Structure Of S. Pombe Brc1 Brct5-Brct6 Doma		5e-10
3szm_A	199	Structure Of Human Microcephalin (Mcph1) Tandem Brc		4e-07
3sht_A	206	Crystal Structure Of Human Mcph1 Tandem Brct Domain		1e-06

>pdb|3SQD|A Chain A, Crystal Structure Of Human Ptip Brct56-Gamma H2ax Complex Length = 219

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 422 LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLN 481
           LGG V       TH++  KV +T+ FLTA+     IV+P WL+E FR  +F+DE +Y+L 
Sbjct: 39  LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRCQKFIDEQNYILR 98
Query: 482 DDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK 540
           D +  + +   L++S+ RA   P  L +     +   I P + T+ AIV  AGG V SK
Sbjct: 99  DAEAEVLFSFSLEESLKRAHVSP--LFKAKYFYITPGICPSLSTMKAIVECAGGKVLSK 155

>pdb|2ETX|A Chain A, Crystal Structure Of Mdc1 Tandem Brct Domains Length = 209

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 404 MNIADDSKKVHLTKVIED--------LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGA 455
           +N    + KV  T V++         LGG++    + ++H+VT ++R+T+ FL AL  G 
Sbjct: 6   LNQESTAPKVLFTGVVDARGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGI 65
Query: 456 WIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIM 515
            I+S +WL +S + G F+    Y++ D +    +   L+D++ RA+ R   LL GY I +
Sbjct: 66  PILSLDWLHQSRKAGFFLPPDEYVVTDPEQEKNFGFSLQDALSRARER--RLLEGYEIYV 123
Query: 516 AAHIQPPIKTLSAIVRSAGGN 536
              +QPP   +  I+   GG 
Sbjct: 124 TPGVQPPPPQMGEIISCCGGT 144

>pdb|3K05|A Chain A, The Crystal Structure Of Mdc1 Brct T2067d In Complex With A Minimal Recognition Tetrapeptide With An Amidated C-Terminus Length = 200

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 6/141 (4%)
Query: 396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGA 455
           G   +++   + D   +    + +  LGG++    + ++H+VT ++R+T+ FL AL  G 
Sbjct: 1   GTAPKVLFTGVVDARGE----RAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGI 56
Query: 456 WIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIM 515
            I+S +WL +S + G F+    Y++ D +    +   L+D++ RA+ R   LL GY I +
Sbjct: 57  PILSLDWLHQSRKAGFFLPPDEYVVTDPEQEKNFGFSLQDALSRARER--RLLEGYEIYV 114
Query: 516 AAHIQPPIKTLSAIVRSAGGN 536
              +QPP   +  I+   GG 
Sbjct: 115 TPGVQPPPPQMGEIISCCGGT 135

>pdb|2ADO|A Chain A, Crystal Structure Of The Brct Repeat Region From The Mediator Of Dna Damage Checkpoint Protein 1, Mdc1 Length = 196

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 417 KVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDES 476
           + +  LGG++    + ++H+VT ++R+T+ FL AL  G  I+S +WL +S + G F+   
Sbjct: 17  RAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGFFLPPD 76
Query: 477 SYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGN 536
            Y++ D +    +   L+D++ RA+ R   LL GY I +   +QPP   +  I+   GG 
Sbjct: 77  EYVVTDPEQEKNFGFSLQDALSRARER--RLLEGYEIYVTPGVQPPPPQMGEIISCCGGT 134

>pdb|2AZM|A Chain A, Crystal Structure Of The Mdc1 Brct Repeat In Complex With The Histone Tail Of Gamma-H2ax Length = 207

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 404 MNIADDSKKVHLTKVIED--------LGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGA 455
           +N    + KV  T V++         LGG++    + ++H+VT ++R+T+ FL AL  G 
Sbjct: 4   LNQESTAPKVLFTGVVDARGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGI 63
Query: 456 WIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIM 515
            I+S +WL +S + G F+    Y++ D +    +   L+D++ RA+ R   LL GY I +
Sbjct: 64  PILSLDWLHQSRKAGFFLPPDEYVVTDPEQEKNFGFSLQDALSRARER--RLLEGYEIYV 121
Query: 516 AAHIQPPIKTLSAIVRSAGGN 536
              +QPP      I+   GG 
Sbjct: 122 TPGVQPPPPQXGEIISCCGGT 142

>pdb|3L40|A Chain A, Crystal Structure Of S. Pombe Brc1 Brct5-Brct6 Domains Length = 220

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 419 IEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSY 478
           ++ L  ++TS+ S  TH++  ++ +T  FL ++  G  +V+ +W+    +    VDE  Y
Sbjct: 25  LKKLDMSITSNPSKCTHLIAPRILRTSKFLCSIPYGPCVVTMDWINSCLKTHEIVDEEPY 84
Query: 479 MLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPP--IKTLSAIVRSAGG 535
           +LND +  L+    L+ ++ RA+A+   LL  Y + + +    P  +  + +IV+S GG
Sbjct: 85  LLNDPEKELELGCTLESALKRARAQGPSLLEDYVVYLTSKTVAPENVPAVISIVKSNGG 143

>pdb|3SZM|A Chain A, Structure Of Human Microcephalin (Mcph1) Tandem Brct Domains In Complex With A Gamma-H2ax Phosphopeptide Length = 199

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 400 RIMLMNIADDSKKVHLTKVIEDLGG-AVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWI 457
           R ++M      K+  + +V++ L G ++  D   T+THV++GK  +TLN L  +  G W+
Sbjct: 12  RTLVMTSMPSEKQNVVIQVVDKLKGFSIAPDVCETTTHVLSGKPLRTLNVLLGIARGCWV 71
Query: 458 VSPNWLKESFREGRFVDESSYMLNDDDYVLKY-RSELKDSVLRAKARPGGLLRGYNIIMA 516
           +S +W+  S   G ++ E  + L+         RSE     L A    G L     ++  
Sbjct: 72  LSYDWVLWSLELGHWISEEPFELSHHFPAAPLCRSECH---LSAGPYRGTLFADQPVMFV 128
Query: 517 AHI-QPPIKTLSAIVRSAGGNVS 538
           +    PP+  L  +V   GG VS
Sbjct: 129 SPASSPPVAKLCELVHLCGGRVS 151

>pdb|3SHT|A Chain A, Crystal Structure Of Human Mcph1 Tandem Brct Domains Length = 206

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 400 RIMLMNIADDSKKVHLTKVIEDLGG-AVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWI 457
           R ++M      K+  + +V++ L G ++  D   T+THV++GK  +TLN L  +  G W+
Sbjct: 19  RTLVMTSMPSEKQNVVIQVVDKLKGFSIAPDVCETTTHVLSGKPLRTLNVLLGIARGCWV 78
Query: 458 VSPNWLKESFREGRFVDESSYMLNDDDYVLKY-RSELKDSVLRAKARPGGLLRGYN-IIM 515
           +S +W+  S   G ++ E  + L+         RSE     L A    G L      + +
Sbjct: 79  LSYDWVLWSLELGHWISEEPFELSHHFPAAPLCRSECH---LSAGPYRGTLFADQPAMFV 135
Query: 516 AAHIQPPIKTLSAIVRSAGGNVS 538
           +    PP+  L  +V   GG VS
Sbjct: 136 SPASSPPVAKLCELVHLCGGRVS 158

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	542
3l41_A	220	BRCT-containing protein 1; BRC1, BRCT domain, tand	3e-36
3sqd_A	219	PAX-interacting protein 1; tandem BRCT domains, ce	5e-36
2etx_A	209	Mediator of DNA damage checkpoint protein 1; tande	7e-32
3al2_A	235	DNA topoisomerase 2-binding protein 1; BRCT domain	5e-26
1ygh_A	164	ADA4, protein (transcriptional activator GCN5); tr	7e-26
1z4r_A	168	General control of amino acid synthesis protein 5-	2e-23
1qst_A	160	TGCN5 histone acetyl transferase; GCN5-related N-a	4e-23
3u3z_A	199	Microcephalin; DNA repair, cell cycle regulation,	3e-22
2nte_A	210	BARD-1, BRCA1-associated ring domain protein 1; BR	4e-22
1l0b_A	229	BRCA1; TANDEM-BRCT, three-helix bundle, unknown fu	3e-20
1t15_A	214	Breast cancer type 1 susceptibility protein; prote	2e-19
1kzy_C	259	Tumor suppressor P53-binding protein 1; tandem-BRC	2e-19
1wf6_A	132	Similar to S.pombe -RAD4+/CUT5+product (A40727); B	3e-11
2vxb_A	241	DNA repair protein RHP9; BRCT, nucleus, cell cycle	3e-10
3l3e_A	107	DNA topoisomerase 2-binding protein 1; BRCT domain	2e-09
2d8m_A	129	DNA-repair protein XRCC1; parallel beta-sheet, DNA	1e-08
3l46_A	112	Protein ECT2; alternative splicing, guanine-nucleo	4e-08
3pa6_A	107	Microcephalin; BRCT domain, cell cycle; HET: MSE;	7e-08
2cou_A	109	ECT2 protein; BRCT domain, RHO GTPase, structural	3e-07
2jw5_A	106	DNA polymerase lambda; BRCT domain, family X polym	3e-07
3olc_X	298	DNA topoisomerase 2-binding protein 1; BRCT domain	5e-07
3olc_X	298	DNA topoisomerase 2-binding protein 1; BRCT domain	3e-05
3ii6_X	263	DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alter	2e-06
1mk4_A	157	Hypothetical protein YQJY; alpha-beta-alpha sandwi	4e-06
1z56_C	264	DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA	4e-06
2r7h_A	177	Putative D-alanine N-acetyltransferase of GNAT FA;	9e-06
2ebw_A	97	DNA repair protein REV1; A/B/A 3 layers, parallel	2e-05
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	2e-05
3pc6_A	104	DNA repair protein XRCC1; BRCT domain, protein:pro	3e-05
3e0k_A	150	Amino-acid acetyltransferase; N-acetylglutamate sy	3e-05
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	4e-05
3d3s_A	189	L-2,4-diaminobutyric acid acetyltransferase; alpha	6e-05
3exn_A	160	Probable acetyltransferase; GCN5-related N-acetylt	2e-04
2atr_A	138	Acetyltransferase, GNAT family; MCSG, structural g	4e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
1bo4_A	168	Protein (serratia marcescens aminoglycoside-3-N- a	8e-04

>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A* Length = 220

 Score =  133 bits (336), Expect = 3e-36
 Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 6/143 (4%)

Query: 400 RIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVS 459
            I                 ++ L  ++TS+ S  TH++  ++ +T  FL ++  G  +V+
Sbjct: 10  YITFTGYDKKPSI----DNLKKLDMSITSNPSKCTHLIAPRILRTSKFLCSIPYGPCVVT 65

Query: 460 PNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHI 519
            +W+    +    VDE  Y+LND +  L+    L+ ++ RA+A+   LL  Y + + +  
Sbjct: 66  MDWINSCLKTHEIVDEEPYLLNDPEKELELGCTLESALKRARAQGPSLLEDYVVYLTSKT 125

Query: 520 QPP--IKTLSAIVRSAGGNVSSK 540
             P  +  + +IV+S GG  S+ 
Sbjct: 126 VAPENVPAVISIVKSNGGVCSTL 148

>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens} Length = 219

 Score =  132 bits (334), Expect = 5e-36
 Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 3/141 (2%)

Query: 400 RIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVS 459
            ++     +  +     K +  LGG V       TH++  KV +T+ FLTA+     IV+
Sbjct: 18  FVLFTGF-EPVQVQQYIKKLYILGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVT 76

Query: 460 PNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHI 519
           P WL+E FR  +F+DE +Y+L D +  + +   L++S+ RA   P  L +     +   I
Sbjct: 77  PEWLEECFRCQKFIDEQNYILRDAEAEVLFSFSLEESLKRAHVSP--LFKAKYFYITPGI 134

Query: 520 QPPIKTLSAIVRSAGGNVSSK 540
            P + T+ AIV  AGG V SK
Sbjct: 135 CPSLSTMKAIVECAGGKVLSK 155

>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A Length = 209

 Score =  121 bits (304), Expect = 7e-32
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 6/149 (4%)

Query: 393 QSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALC 452
                  +++   + D   +    + +  LGG++    + ++H+VT ++R+T+ FL AL 
Sbjct: 7   NQESTAPKVLFTGVVDARGE----RAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALG 62

Query: 453 SGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYN 512
            G  I+S +WL +S + G F+    Y++ D +    +   L+D++ RA+ R   LL GY 
Sbjct: 63  RGIPILSLDWLHQSRKAGFFLPPDEYVVTDPEQEKNFGFSLQDALSRARERR--LLEGYE 120

Query: 513 IIMAAHIQPPIKTLSAIVRSAGGNVSSKY 541
           I +   +QPP   +  I+   GG      
Sbjct: 121 IYVTPGVQPPPPQMGEIISCCGGTYLPSM 149

>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A* Length = 235

 Score =  105 bits (263), Expect = 5e-26
 Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 20/164 (12%)

Query: 392 FQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSD---GSTSTHVVTGKVRKTLNFL 448
             S  K +   L ++ +  +++    +IE LGG V        T TH+V G   +   +L
Sbjct: 3   LGSLKKQYIFQLSSL-NPQERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYL 61

Query: 449 TALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKA------ 502
            ++ +G W++  ++L+     G FV E  Y       +             A A      
Sbjct: 62  ASVAAGKWVLHRSYLEACRTAGHFVQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRK 121

Query: 503 ---------RPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNV 537
                       G   G+ +I+    Q        +++S G  V
Sbjct: 122 KIQQRQESGIVEGAFSGWKVILHVD-QSREAGFKRLLQSGGAKV 164

>1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 Length = 164

 Score =  103 bits (257), Expect = 7e-26
 Identities = 29/149 (19%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 72  EYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTL 131
           +  F +VN  + +++     L  +  I+ ++LP M           ++ + V +  + ++
Sbjct: 1   KIEFRVVNNDNTKEN--MMVLTGLKNIFQKQLPKMP--------KEYIARLVYDRSHLSM 50

Query: 132 LLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV 191
            +    +     VV  ITY+      ++AE+   A+SS  Q +G G  L   L+  +++ 
Sbjct: 51  AV----IRKPLTVVGGITYRPFD-KREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNT 105

Query: 192 -GIRTIFCWGDKESEGFWHKQDTSADTAV 219
             I+    + D  + G++ KQ  + +  +
Sbjct: 106 SNIKYFLTYADNYAIGYFKKQGFTKEITL 134

>1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* Length = 168

 Score = 96.2 bits (239), Expect = 2e-23
 Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 23/167 (13%)

Query: 75  FVLVNPKDAEDSC--SKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLL 132
           F ++       +      +L  +  ++S +LP M           ++ + V + K+ TL 
Sbjct: 7   FHVIGNSLTPKANRRVLLWLVGLQNVFSHQLPRM--------PKEYIARLVFDPKHKTLA 58

Query: 133 LKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG 192
           L       D  V+  I +++ P    + E+   AV+S  Q KG G  L   L++      
Sbjct: 59  L-----IKDGRVIGGICFRMFPTQ-GFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHN 112

Query: 193 IRTIFCWGDKESEGFWHKQ----DTSADTAVSLKFCFPVKPCEKSSL 235
           I     + D+ + G++ KQ    D     +  L +   +K  E ++L
Sbjct: 113 ILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGY---IKDYEGATL 156

>1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* Length = 160

 Score = 94.9 bits (236), Expect = 4e-23
 Identities = 29/138 (21%), Positives = 61/138 (44%), Gaps = 17/138 (12%)

Query: 75  FVLV-NPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLL 133
           F ++ N        +   L D+  I+SR+LP M           ++ K V +  + ++++
Sbjct: 3   FDILTNDGTHR---NMKLLIDLKNIFSRQLPKMP--------KEYIVKLVFDRHHESMVI 51

Query: 134 KSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGI 193
               + +   V+  I ++      ++AEV   AV++  Q +G G  L  + +  +Q   I
Sbjct: 52  ----LKNKQKVIGGICFRQYK-PQRFAEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNI 106

Query: 194 RTIFCWGDKESEGFWHKQ 211
             +  + D  + G++ KQ
Sbjct: 107 EYLLTYADNFAIGYFKKQ 124

>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A* Length = 199

 Score = 93.7 bits (232), Expect = 3e-22
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 3/146 (2%)

Query: 397 KCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTS--THVVTGKVRKTLNFLTALCSG 454
           K  R ++M      K+  + +V++ L G   +       THV++GK  +TLN L  +  G
Sbjct: 9   KPTRTLVMTSMPSEKQNVVIQVVDKLKGFSIAPDVCETTTHVLSGKPLRTLNVLLGIARG 68

Query: 455 AWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNII 514
            W++S +W+  S   G ++ E  +      +        +  +     R         + 
Sbjct: 69  CWVLSYDWVLWSLELGHWISEEPFE-LSHHFPAAPLCRSECHLSAGPYRGTLFADQPVMF 127

Query: 515 MAAHIQPPIKTLSAIVRSAGGNVSSK 540
           ++    PP+  L  +V   GG VS  
Sbjct: 128 VSPASSPPVAKLCELVHLCGGRVSQV 153

>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A Length = 210

 Score = 93.7 bits (232), Expect = 4e-22
 Identities = 27/137 (19%), Positives = 51/137 (37%), Gaps = 13/137 (9%)

Query: 408 DDSKKVHLTKVIEDLGGAVTSDGSTS-THVV--TGKVRKTLNFLTALCSGAWIVSPNWLK 464
              ++  L+++   L     ++  ++ THVV     V+ TL  +  + +G WI+   W+K
Sbjct: 11  SSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVK 70

Query: 465 ESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNI-IMAAHIQPPI 523
              R      E  Y + +           + S L  +     L  G    +       P 
Sbjct: 71  ACLRRKVCEQEEKYEIPEGP---------RRSRLNREQLLPKLFDGCYFYLWGTFKHHPK 121

Query: 524 KTLSAIVRSAGGNVSSK 540
             L  +V + GG + S+
Sbjct: 122 DNLIKLVTAGGGQILSR 138

>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3 Length = 229

 Score = 88.7 bits (219), Expect = 3e-20
 Identities = 26/156 (16%), Positives = 56/156 (35%), Gaps = 12/156 (7%)

Query: 393 QSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTS-THVVTGK-----VRKTLN 446
           +   +   +++  +    + + + K  E    A+T   +   THV+          +TL 
Sbjct: 2   ERAERDISMVVSGL-TPKEVMIVQKFAEKYRLALTDVITEETTHVIIKTDAEFVCERTLK 60

Query: 447 FLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGG 506
           +   +  G WIVS +W+ +S +E + +    + +  D               R++     
Sbjct: 61  YFLGIAGGKWIVSYSWVIKSIQERKLLSVHEFEVKGD----VVTGSNHQGPRRSRESQEK 116

Query: 507 LLRGYNIIMAAH-IQPPIKTLSAIVRSAGGNVSSKY 541
           L  G  I         P   L  +++  G +V  + 
Sbjct: 117 LFEGLQIYCCEPFTNMPKDELERMLQLCGASVVKEL 152

>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A Length = 214

 Score = 86.4 bits (213), Expect = 2e-19
 Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 11/152 (7%)

Query: 397 KCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTS-THVVTGK-----VRKTLNFLTA 450
           K   +++  +  +     + K        +T+  +   THVV          +TL +   
Sbjct: 3   KRMSMVVSGLTPEEFM-LVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLG 61

Query: 451 LCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRG 510
           +  G W+VS  W+ +S +E + ++E  + +  D    +     K +    +++   + RG
Sbjct: 62  IAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRA---RESQDRKIFRG 118

Query: 511 YNI-IMAAHIQPPIKTLSAIVRSAGGNVSSKY 541
             I         P   L  +V+  G +V  + 
Sbjct: 119 LEICCYGPFTNMPTDQLEWMVQLCGASVVKEL 150

>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B Length = 259

 Score = 87.2 bits (215), Expect = 2e-19
 Identities = 20/136 (14%), Positives = 48/136 (35%), Gaps = 15/136 (11%)

Query: 410 SKKVHLTKVIEDLGGAVTSDGSTS-------THVVTGKVRKTLNFLTALCSGAWIVSPNW 462
             K +    +    G +  D + +         ++  +  +T  +   L SG   VS  W
Sbjct: 58  FNKQYTESQLRAGAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVW 117

Query: 463 LKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNI-IMAAHIQP 521
           + +S    +  +  +Y+L          S  +  +L  + R     +   + +++   Q 
Sbjct: 118 VHDSCHANQLQNYRNYLLPAGY------SLEEQRILDWQPRE-NPFQNLKVLLVSDQQQN 170

Query: 522 PIKTLSAIVRSAGGNV 537
            ++  S I+ + G   
Sbjct: 171 FLELWSEILMTGGAAS 186

>1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5 Length = 132

 Score = 60.3 bits (146), Expect = 3e-11
 Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 6/96 (6%)

Query: 390 KEFQSNGKCF---RIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTS-THVVTGKVRKTL 445
             FQ+        RI L   +       L ++I   GG   +  +   THV+ G     L
Sbjct: 32  SAFQAPEDLLDGCRIYLCGFSGRKLD-KLRRLINSGGGVRFNQLNEDVTHVIVGDYDDEL 90

Query: 446 N-FLTALCSGAWIVSPNWLKESFREGRFVDESSYML 480
             F         +V   WL E F +G  + E  Y+ 
Sbjct: 91  KQFWNKSAHRPHVVGAKWLLECFSKGYMLSEEPYIH 126

>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A* Length = 241

 Score = 59.6 bits (143), Expect = 3e-10
 Identities = 29/177 (16%), Positives = 47/177 (26%), Gaps = 35/177 (19%)

Query: 396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTS---------------------- 433
              F        D   +  L  V++D GG V   G                         
Sbjct: 5   DCVFAFSGPVHEDAYDRSALETVVQDHGGLVLDTGLRPLFNDPFKSKQKKLRHLKPQKRS 64

Query: 434 -----THVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYML-------- 480
                  VV+    + + +L AL      V P ++K+  +  R VD S Y+L        
Sbjct: 65  KSWNQAFVVSDTFSRKVKYLEALAFNIPCVHPQFIKQCLKMNRVVDFSPYLLASGYSHRL 124

Query: 481 NDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNV 537
           +          +  DS+        G L G  I+         +            +
Sbjct: 125 DCTLSQRIEPFDTTDSLYDRLLARKGPLFGKKILFIIPEAKSWQKKIENTEQGQKAL 181

>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 129

 Score = 52.6 bits (126), Expect = 1e-08
 Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 2/78 (2%)

Query: 408 DDSKKVHLTKVIEDLGGAVTSDGSTS-THVVTGKVRKTLNFLTALCSGAWIVSPNWLKES 466
            +  +  L     +LG     D +   TH++      T  +   L  G  IV   W+ + 
Sbjct: 34  QNPFRSELRDKALELGAKYRPDWTRDSTHLICAFAN-TPKYSQVLGLGGRIVRKEWVLDC 92

Query: 467 FREGRFVDESSYMLNDDD 484
            R  R +    Y++    
Sbjct: 93  HRMRRRLPSQRYLMAGPG 110

>3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens} Length = 112

 Score = 50.6 bits (121), Expect = 4e-08
 Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 3/86 (3%)

Query: 400 RIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTS-THVVTGKVRKTLNFLTALCSGAWIV 458
            +  +  +D+ K  ++ ++ E  GG     G    TH+V  +     +         ++V
Sbjct: 26  ILSFLGFSDEEKT-NMEEMTEMQGGKYLPLGDERCTHLVVEEN-IVKDLPFEPSKKLYVV 83

Query: 459 SPNWLKESFREGRFVDESSYMLNDDD 484
              W   S +      E+ Y+    +
Sbjct: 84  KQEWFWGSIQMDARAGETMYLYEKAN 109

>3pa6_A Microcephalin; BRCT domain, cell cycle; HET: MSE; 1.50A {Homo sapiens} PDB: 3ktf_A* 2wt8_A* Length = 107

 Score = 49.9 bits (119), Expect = 7e-08
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 408 DDSKKVHLTKVIEDLGGAVTSD-GSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKES 466
            ++     T  + D+G  V+       THV+     ++  +  A   G  +VS  W+++ 
Sbjct: 23  TENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQS-TWDKAQKRGVKLVSVLWVEKC 81

Query: 467 FREGRFVDESSYMLNDDD 484
              G  +DES +   + +
Sbjct: 82  RTAGAHIDESLFPAANMN 99

>2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 109

 Score = 48.0 bits (114), Expect = 3e-07
 Identities = 13/78 (16%), Positives = 28/78 (35%), Gaps = 2/78 (2%)

Query: 408 DDSKKVHLTKVIEDLGGAVTSDGSTS-THVVTGKVRKTLNFLTALCSGAWIVSPNWLKES 466
            D +K  + ++ E  GG+    G    TH++  +     +         ++V   W   S
Sbjct: 24  SDEEKHSMEEMTEMQGGSYLPVGDERCTHLIVEEN-TVKDLPFEPSKKLFVVKQEWFWGS 82

Query: 467 FREGRFVDESSYMLNDDD 484
            +      E+ Y+    +
Sbjct: 83  IQMDARAGETMYLYEKAN 100

>2jw5_A DNA polymerase lambda; BRCT domain, family X polymerase, nonhomologous END joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis; HET: DNA; NMR {Homo sapiens} Length = 106

 Score = 48.1 bits (114), Expect = 3e-07
 Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 6/72 (8%)

Query: 415 LTKVIEDLGGAVTSDGSTS-THVVTGKVRKTLNFL-----TALCSGAWIVSPNWLKESFR 468
             K I   GG +        TH+V  +       L       L  GA +V   WL    +
Sbjct: 32  FEKQIVQHGGQLCPAQGPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQ 91

Query: 469 EGRFVDESSYML 480
           E R VD + + +
Sbjct: 92  ERRLVDVAGFSI 103

>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A* Length = 298

 Score = 50.5 bits (120), Expect = 5e-07
 Identities = 16/119 (13%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 373 DAKEDRPVCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSD--G 430
           +  +++ +   +   +            I +  +    +K  + ++    GG        
Sbjct: 177 EKSQEKKITRYTDINMEDFKCPIFLGCIICVTGLCGLDRK-EVQQLTVKHGGQYMGQLKM 235

Query: 431 STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKY 489
           +  TH++  + +    +  A       V+  W  +S  +G   DES Y        L++
Sbjct: 236 NECTHLIVQEPK-GQKYECAKRWNVHCVTTQWFFDSIEKGFCQDESIYKTEPRPEALEH 293

>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A* Length = 298

 Score = 45.1 bits (106), Expect = 3e-05
 Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 408 DDSKKVHLTKVIEDLGGAVTSDGSTS-THVVTGKVRKTLNFLTALCSGAWIVSPNWLKES 466
           +  K+  + K ++ +GG V  D + S TH++ G+V  +  +L A      I+ P+W+K  
Sbjct: 117 EKEKREEVHKYVQMMGGRVYRDLNVSVTHLIAGEVG-SKKYLVAANLKKPILLPSWIKTL 175

Query: 467 FREGRFVDESSYMLNDDDY 485
           + + +    + Y   + + 
Sbjct: 176 WEKSQEKKITRYTDINMED 194

>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A* Length = 263

 Score = 48.8 bits (115), Expect = 2e-06
 Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 387 FISKEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTS-THVVTGKVRKTL 445
           F       +       L    + ++       +   G  V S  +   +HV+ G+    +
Sbjct: 165 FRRHTVYLDSYAVINDLSTKNEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRV 224

Query: 446 NFLTALCS----GAWIVSPNWLKESFREGRFVDESSYML 480
               A          I+  +W+ +S  +    +E+ Y++
Sbjct: 225 ADFKAFRRTFKRKFKILKESWVTDSIDKCELQEENQYLI 263

>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1 Length = 157

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 11/75 (14%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 139 DDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC 198
            + + +   +      +D + A +  + V   ++   +G+ LY    + ++  G   + C
Sbjct: 48  SEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKC 107

Query: 199 W---GDKESEGFWHK 210
                +K S  +  K
Sbjct: 108 VTSPVNKVSIAYHTK 122

>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae} Length = 264

 Score = 47.6 bits (112), Expect = 4e-06
 Identities = 17/139 (12%), Positives = 43/139 (30%), Gaps = 18/139 (12%)

Query: 357 REITPSNHVTVDCTGNDAKEDRPVCTTSAAFISKEFQSNGKCFRIMLMNIADDSKKVHLT 416
            +I+ +   ++  +         +   S       F  + +     +      ++   + 
Sbjct: 124 NDISETKLSSLYKSQLSLPPMGELEIDSEVRRFPLFLFSNRIA--YVPRRKISTEDDIIE 181

Query: 417 KVIEDLGGAVTSDGSTSTHVVTG----------------KVRKTLNFLTALCSGAWIVSP 460
             I+  GG +T   S    ++                  K+++ +     +   A +V+P
Sbjct: 182 MKIKLFGGKITDQQSLCNLIIIPYTDPILRKDCMNEVHEKIKEQIKASDTIPKIARVVAP 241

Query: 461 NWLKESFREGRFVDESSYM 479
            W+  S  E   V E  + 
Sbjct: 242 EWVDHSINENCQVPEEDFP 260

>2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp} Length = 177

 Score = 45.2 bits (107), Expect = 9e-06
 Identities = 17/62 (27%), Positives = 27/62 (43%)

Query: 138 MDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIF 197
             +DD +     Y   PA     ++   AV+   QH G+GR L  E+   ++  G R +F
Sbjct: 73  ATEDDDMAGYACYGPTPATEGTYDLYWIAVAPHRQHSGLGRALLAEVVHDVRLTGGRLLF 132

Query: 198 CW 199
             
Sbjct: 133 AE 134

>2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens} Length = 97

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 9/71 (12%)

Query: 414 HLTKVIEDLGGAVTSD--GSTSTHVVTGKV--RKTLNFLTALCSGAWIVSPNWLKESFRE 469
            L K++   GG        S +TH++   +   K          G  ++ P W+ ES + 
Sbjct: 30  ELRKLMMLHGGQYHVYYSRSKTTHIIATNLPNAKIKEL-----KGEKVIRPEWIVESIKA 84

Query: 470 GRFVDESSYML 480
           GR +    Y L
Sbjct: 85  GRLLSYIPYQL 95

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} Length = 442

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 408 DDSKKVHLTKVIEDLGGAVTSD-GSTSTHVVTGKVRKTLNFLTAL-CSGAWIVSPNWLKE 465
            D     + K     G  V  D     TH++  K+R T     A+      +V  NWL E
Sbjct: 368 VDVLSSDIAKWAMSFGAEVVLDFSVPPTHLIAAKIR-TEKVKKAVSMGNIKVVKLNWLTE 426

Query: 466 SFREGRFVDESSYML 480
           S  + + + ES Y+L
Sbjct: 427 SLSQWKRLPESDYLL 441

>3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} PDB: 3pc8_A* 3qvg_B* 1cdz_A Length = 104

 Score = 42.2 bits (99), Expect = 3e-05
 Identities = 10/88 (11%), Positives = 23/88 (26%), Gaps = 10/88 (11%)

Query: 399 FRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTS-THVVTG-----KVRKTLNFLTALC 452
               L       ++  L + +    G +    +     V+T         + L       
Sbjct: 11  KHFFLYGEFPGDERRRLIRYVTAFNGELEDYMNERVQFVITAQEWDPNFEEALMEN---- 66

Query: 453 SGAWIVSPNWLKESFREGRFVDESSYML 480
                V P W+     + + +    Y +
Sbjct: 67  PSLAFVRPRWIYSCNEKQKLLPHQLYGV 94

>3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus} Length = 150

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 1/70 (1%)

Query: 138 MDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIF 197
           ++ D +++          + + AE+   A+   Y+    G LL   ++ R +S  I  IF
Sbjct: 48  IEKDGLIIGCAALYPYSEE-RKAEMACVAIHPDYRDGNRGLLLLNYMKHRSKSENINQIF 106

Query: 198 CWGDKESEGF 207
                    F
Sbjct: 107 VLTTHSLHWF 116

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} Length = 372

 Score = 44.8 bits (105), Expect = 4e-05
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 408 DDSKKVHLTKVIEDLGGAVTSD-GSTSTHVVTGKVRKTLNFLTAL-CSGAWIVSPNWLKE 465
            D     + K     G  V  D     TH++  K+R T     A+      +V  NWL E
Sbjct: 298 VDVLSSDIAKWAMSFGAEVVLDFSVPPTHLIAAKIR-TEKVKKAVSMGNIKVVKLNWLTE 356

Query: 466 SFREGRFVDESSYML 480
           S  + + + ES Y+L
Sbjct: 357 SLSQWKRLPESDYLL 371

>3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 1.87A {Bordetella parapertussis 12822} Length = 189

 Score = 43.3 bits (102), Expect = 6e-05
 Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 7/80 (8%)

Query: 124 LNGKYCTLLLKSSF-------MDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGV 176
           LN  Y  LLL                 +   ++  ++P       V   AV S  +   +
Sbjct: 52  LNSLYAYLLLCEHHAHTCVVAESPGGRIDGFVSAYLLPTRPDVLFVWQVAVHSRARGHRL 111

Query: 177 GRLLYLELRKRLQSVGIRTI 196
           GR +   + +R +   +R +
Sbjct: 112 GRAMLGHILERQECRHVRHL 131

>3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus} Length = 160

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCW 199
                V  +  ++   + + A + L  +   +Q +G+GR         L   G+R ++  
Sbjct: 69  LGQEPVGYLDAKLGYPEAEDATLSLLLIREDHQGRGLGRQALERFAAGLD--GVRRLYAV 126

Query: 200 ---GDKESEGFWHKQ 211
               + +++ F+  Q
Sbjct: 127 VYGHNPKAKAFFQAQ 141

>2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1 Length = 138

 Score = 39.9 bits (93), Expect = 4e-04
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCW 199
           D D VV  I  ++V        V    V   YQ +G+G  L  E     +      +   
Sbjct: 49  DGDAVVGLI--RLVGDGFSSVFVQDLIVLPSYQRQGIGSSLMKEALGNFKEAYQVQLATE 106

Query: 200 GDKESEGFWHKQ 211
             +++ GF+   
Sbjct: 107 ETEKNVGFYRSM 118

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 5e-04
 Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 34/148 (22%)

Query: 398 CFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGK--VRKTLNFLTALCS-G 454
            ++ +L    D        K ++D+  ++ S      H++  K  V  TL     L S  
Sbjct: 17  QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEID-HIIMSKDAVSGTLRLFWTLLSKQ 75

Query: 455 AWIV--------SPN--WLKESFRE---------GRFVDESSYMLNDDDYVLKY---RSE 492
             +V          N  +L    +            ++++   + ND+    KY   R +
Sbjct: 76  EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ 135

Query: 493 ----LKDSVLRAKARPGGLLRGYNIIMA 516
               L+ ++L  +     L+ G    + 
Sbjct: 136 PYLKLRQALLELRPAKNVLIDG----VL 159

>1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 Length = 168

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 25/155 (16%)

Query: 55  LKSSNDTTHSKSEEKGE-------EYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMN 107
           L+SSND T   S  K +             + P   +       ++  L ++ RE   + 
Sbjct: 2   LRSSNDVTQQGSRPKTKLGGSSMGIIRTCRLGPDQVKS------MRAALDLFGREFGDVA 55

Query: 108 YAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLA-- 165
             +     S +L   +L  K    L       D + VV A+   ++P             
Sbjct: 56  TYSQHQPDSDYLGN-LLRSKTFIALA----AFDQEAVVGALAAYVLP--KFEQPRSEIYI 108

Query: 166 ---AVSSIYQHKGVGRLLYLELRKRLQSVGIRTIF 197
              AVS  ++ +G+   L   L+    ++G   I+
Sbjct: 109 YDLAVSGEHRRQGIATALINLLKHEANALGAYVIY 143

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	542
3l41_A	220	BRCT-containing protein 1; BRC1, BRCT domain, tand	99.96
3sqd_A	219	PAX-interacting protein 1; tandem BRCT domains, ce	99.96
2etx_A	209	Mediator of DNA damage checkpoint protein 1; tande	99.95
3al2_A	235	DNA topoisomerase 2-binding protein 1; BRCT domain	99.94
3u3z_A	199	Microcephalin; DNA repair, cell cycle regulation,	99.92
1l0b_A	229	BRCA1; TANDEM-BRCT, three-helix bundle, unknown fu	99.91
2nte_A	210	BARD-1, BRCA1-associated ring domain protein 1; BR	99.9
1t15_A	214	Breast cancer type 1 susceptibility protein; prote	99.9
1kzy_C	259	Tumor suppressor P53-binding protein 1; tandem-BRC	99.78
2vxb_A	241	DNA repair protein RHP9; BRCT, nucleus, cell cycle	99.71
3olc_X	298	DNA topoisomerase 2-binding protein 1; BRCT domain	99.6
1qst_A	160	TGCN5 histone acetyl transferase; GCN5-related N-a	99.57
3l3e_A	107	DNA topoisomerase 2-binding protein 1; BRCT domain	99.56
1ygh_A	164	ADA4, protein (transcriptional activator GCN5); tr	99.55
3t7k_A	256	RTT107, regulator of TY1 transposition protein 107	99.55
2d8m_A	129	DNA-repair protein XRCC1; parallel beta-sheet, DNA	99.49
1z4r_A	168	General control of amino acid synthesis protein 5-	99.48
3l46_A	112	Protein ECT2; alternative splicing, guanine-nucleo	99.44
2cou_A	109	ECT2 protein; BRCT domain, RHO GTPase, structural	99.4
4id3_A	92	DNA repair protein REV1; BRCT domain, protein bind	99.39
3mgd_A	157	Predicted acetyltransferase; structural genomics,	99.35
2q0y_A	153	GCN5-related N-acetyltransferase; YP_295895.1, ace	99.33
3e0k_A	150	Amino-acid acetyltransferase; N-acetylglutamate sy	99.31
3lod_A	162	Putative acyl-COA N-acyltransferase; structural ge	99.3
1bo4_A	168	Protein (serratia marcescens aminoglycoside-3-N- a	99.29
3i3g_A	161	N-acetyltransferase; malaria, structural genomics,	99.29
2ebw_A	97	DNA repair protein REV1; A/B/A 3 layers, parallel	99.29
4e0a_A	164	BH1408 protein; structural genomics, PSI-biology,	99.28
3gy9_A	150	GCN5-related N-acetyltransferase; YP_001815201.1,	99.28
3efa_A	147	Putative acetyltransferase; structural genom 2, pr	99.28
4evy_A	166	Aminoglycoside N(6')-acetyltransferase type 1; cen	99.28
3jvn_A	166	Acetyltransferase; alpha-beta protein, structural	99.27
1mk4_A	157	Hypothetical protein YQJY; alpha-beta-alpha sandwi	99.26
3t9y_A	150	Acetyltransferase, GNAT family; PSI-biology, struc	99.26
1tiq_A	180	Protease synthase and sporulation negative regulat	99.26
1wf6_A	132	Similar to S.pombe -RAD4+/CUT5+product (A40727); B	99.26
1n71_A	180	AAC(6')-II; aminoglycoside 6'-N-acetyltransferase,	99.26
2jdc_A	146	Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1.	99.25
1y9w_A	140	Acetyltransferase; structural genomics, Pro struct	99.24
1vkc_A	158	Putative acetyl transferase; structural genomics,	99.24
3t90_A	149	Glucose-6-phosphate acetyltransferase 1; GNAT fold	99.22
2g3a_A	152	Acetyltransferase; structural genomics, PSI, prote	99.22
1ghe_A	177	Acetyltransferase; acyl coenzyme A complex; HET: A	99.22
3ii6_X	263	DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alter	99.22
1xeb_A	150	Hypothetical protein PA0115; midwest center for st	99.22
1s3z_A	165	Aminoglycoside 6'-N-acetyltransferase; GNAT, amino	99.21
3owc_A	188	Probable acetyltransferase; structural genomics, P	99.21
2x7b_A	168	N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulf	99.2
4ag7_A	165	Glucosamine-6-phosphate N-acetyltransferase; HET:	99.2
1y9k_A	157	IAA acetyltransferase; structural genomics, midwes	99.2
3olc_X	298	DNA topoisomerase 2-binding protein 1; BRCT domain	99.19
2ob0_A	170	Human MAK3 homolog; acetyltransferase, structural	99.19
2dxq_A	150	AGR_C_4057P, acetyltransferase; structural genomic	99.19
1cjw_A	166	Protein (serotonin N-acetyltransferase); HET: COT;	99.19
3d8p_A	163	Acetyltransferase of GNAT family; NP_373092.1, str	99.19
3fyn_A	176	Integron gene cassette protein HFX_CASS3; integron	99.19
1i12_A	160	Glucosamine-phosphate N-acetyltransferase; GNAT, a	99.19
1qsm_A	152	HPA2 histone acetyltransferase; protein-acetyl coe	99.18
3pp9_A	187	Putative streptothricin acetyltransferase; toxin p	99.17
3fix_A	183	N-acetyltransferase; termoplasma acidophilum, stru	99.17
2oh1_A	179	Acetyltransferase, GNAT family; YP_013287.1, struc	99.17
2eui_A	153	Probable acetyltransferase; dimer, structural geno	99.17
4h89_A	173	GCN5-related N-acetyltransferase; N-acyltransferas	99.17
3pa6_A	107	Microcephalin; BRCT domain, cell cycle; HET: MSE;	99.16
1z4e_A	153	Transcriptional regulator; nysgxrc target T2017, G	99.16
2r7h_A	177	Putative D-alanine N-acetyltransferase of GNAT FA;	99.16
1q2y_A	140	Protein YJCF, similar to hypothetical proteins; GC	99.16
1wwz_A	159	Hypothetical protein PH1933; structural genomics,	99.16
2pdo_A	144	Acetyltransferase YPEA; alpha-beta-alpha sandwich,	99.15
2vez_A	190	Putative glucosamine 6-phosphate acetyltransferase	99.15
3s6f_A	145	Hypothetical acetyltransferase; acyl-COA N-acyltra	99.15
2ae6_A	166	Acetyltransferase, GNAT family; GCN5-related N-ace	99.15
3i9s_A	183	Integron cassette protein; oyster POND, woods HOLE	99.15
2cnt_A	160	Modification of 30S ribosomal subunit protein S18;	99.14
1s7k_A	182	Acetyl transferase; GNAT; 1.80A {Salmonella typhim	99.13
1u6m_A	199	Acetyltransferase, GNAT family; structural genomic	99.13
1kux_A	207	Aralkylamine, serotonin N-acetyltransferase; enzym	99.13
3dr6_A	174	YNCA; acetyltransferase, csgid target, essential g	99.13
2cy2_A	174	TTHA1209, probable acetyltransferase; structural g	99.13
2fia_A	162	Acetyltransferase; structural genomics, PSI, prote	99.13
2bei_A	170	Diamine acetyltransferase 2; SSAT2, BC011751, AAH1	99.12
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	99.12
2ozh_A	142	Hypothetical protein XCC2953; structural genomics,	99.12
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	99.12
1yvk_A	163	Hypothetical protein BSU33890; ALPHS-beta protein,	99.12
4fd4_A	217	Arylalkylamine N-acetyltransferase like 5B; GNAT;	99.12
1ufh_A	180	YYCN protein; alpha and beta, fold, acetyltransfer	99.11
3tth_A	170	Spermidine N1-acetyltransferase; central intermedi	99.11
3dsb_A	157	Putative acetyltransferase; APC60368.2, ST genomic	99.11
1vhs_A	175	Similar to phosphinothricin acetyltransferase; str	99.1
1y7r_A	133	Hypothetical protein SA2161; structural genomics,	99.1
1yre_A	197	Hypothetical protein PA3270; APC5563, midwest cent	99.1
2o28_A	184	Glucosamine 6-phosphate N-acetyltransferase; struc	99.1
2q7b_A	181	Acetyltransferase, GNAT family; NP_689019.1, struc	99.09
3pzj_A	209	Probable acetyltransferases; MCSG, PSI-2, structur	99.09
3g8w_A	169	Lactococcal prophage PS3 protein 05; APC61042, ace	99.09
3eg7_A	176	Spermidine N1-acetyltransferase; structural genomi	99.09
3kkw_A	182	Putative uncharacterized protein; acetyltransferas	99.09
3qb8_A	197	A654L protein; GNAT N-acetyltransferase, acetyltra	99.09
2fe7_A	166	Probable N-acetyltransferase; structural genomics,	99.08
1on0_A	158	YYCN protein; structural genomics, alpha-beta prot	99.08
3exn_A	160	Probable acetyltransferase; GCN5-related N-acetylt	99.08
2fiw_A	172	GCN5-related N-acetyltransferase:aminotransferase	99.08
1yx0_A	159	Hypothetical protein YSNE; NESG, GFT structral gen	99.08
3d3s_A	189	L-2,4-diaminobutyric acid acetyltransferase; alpha	99.08
2ge3_A	170	Probable acetyltransferase; structural GEN PSI, pr	99.07
2i6c_A	160	Putative acetyltransferase; GNAT family, structura	99.06
3fbu_A	168	Acetyltransferase, GNAT family; structur genomics,	99.06
3pc6_A	104	DNA repair protein XRCC1; BRCT domain, protein:pro	99.06
2i79_A	172	Acetyltransferase, GNAT family; acetyl coenzyme *A	99.05
3fnc_A	163	Protein LIN0611, putative acetyltransferase; GNAT,	99.05
2atr_A	138	Acetyltransferase, GNAT family; MCSG, structural g	99.05
3f8k_A	160	Protein acetyltransferase; GCN5-related N-acetyltr	99.04
2r1i_A	172	GCN5-related N-acetyltransferase; YP_831484.1, put	99.04
3igr_A	184	Ribosomal-protein-S5-alanine N-acetyltransferase;	99.04
1r57_A	102	Conserved hypothetical protein; GCN5, N-acetyltran	99.03
4fd5_A	222	Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A	99.03
3r9f_A	188	MCCE protein; microcin C7, acetyltransferase, SELF	99.02
3te4_A	215	GH12636P, dopamine N acetyltransferase, isoform A;	99.02
1z56_C	264	DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA	99.02
2fl4_A	149	Spermine/spermidine acetyltransferase; structural	99.02
1m4i_A	181	Aminoglycoside 2'-N-acetyltransferase; COA binding	99.01
2gan_A	190	182AA long hypothetical protein; alpha-beta protei	99.01
2bue_A	202	AAC(6')-IB; GNAT, transferase, aminoglycoside, flu	99.0
2aj6_A	159	Hypothetical protein MW0638; structural genomics,	99.0
2z10_A	194	Ribosomal-protein-alanine acetyltransferase; alpha	98.99
2ree_A	224	CURA; GNAT, S-acetyltransferase, decarboxylase, po	98.99
1yr0_A	175	AGR_C_1654P, phosphinothricin acetyltransferase; s	98.98
2b5g_A	171	Diamine acetyltransferase 1; structural genomics,	98.98
1nsl_A	184	Probable acetyltransferase; structural genomics, h	98.98
3bln_A	143	Acetyltransferase GNAT family; NP_981174.1, struct	98.97
2qec_A	204	Histone acetyltransferase HPA2 and related acetylt	98.97
2j8m_A	172	Acetyltransferase PA4866 from P. aeruginosa; GCN5	98.97
3ec4_A	228	Putative acetyltransferase from the GNAT family; Y	98.96
2k5t_A	128	Uncharacterized protein YHHK; N-acetyl transferase	98.95
3juw_A	175	Probable GNAT-family acetyltransferase; structural	98.95
4fd7_A	238	Putative arylalkylamine N-acetyltransferase 7; GNA	98.93
2jlm_A	182	Putative phosphinothricin N-acetyltransferase; met	98.93
3eo4_A	164	Uncharacterized protein MJ1062; APC60792.2,MJ_1062	98.93
2fck_A	181	Ribosomal-protein-serine acetyltransferase, putat;	98.93
3ey5_A	181	Acetyltransferase-like, GNAT family; structural ge	98.91
3ddd_A	288	Putative acetyltransferase; NP_142035.1, structura	98.9
3ld2_A	197	SMU.2055, putative acetyltransferase; HET: COA; 2.	98.9
2wpx_A	339	ORF14; transferase, acetyl transferase, antibiotic	98.89
3h4q_A	188	Putative acetyltransferase; NP_371943.1, structura	98.88
3tcv_A	246	GCN5-related N-acetyltransferase; GRAM negative co	98.88
2pc1_A	201	Acetyltransferase, GNAT family; NP_688560.1, struc	98.88
2vi7_A	177	Acetyltransferase PA1377; GNAT, GCN5 family, N-ace	98.87
3d2m_A	456	Putative acetylglutamate synthase; protein-COA-Glu	98.87
3f5b_A	182	Aminoglycoside N(6')acetyltransferase; APC60744, l	98.86
2pr1_A	163	Uncharacterized N-acetyltransferase YLBP; YIBP pro	98.86
2fsr_A	195	Acetyltransferase; alpha-beta-sandwich, structural	98.82
2wpx_A	339	ORF14; transferase, acetyl transferase, antibiotic	98.81
2g0b_A	198	FEEM; N-acyl transferase, environmental DNA, prote	98.81
1p0h_A	318	Hypothetical protein RV0819; GNAT fold, acetyltran	98.75
3frm_A	254	Uncharacterized conserved protein; APC61048, staph	98.74
2vzy_A	218	RV0802C; transferase, GCN5-related N-acetyltransfe	98.73
2d4p_A	141	Hypothetical protein TTHA1254; structural genomics	98.72
2q04_A	211	Acetoin utilization protein; ZP_00540088.1, struct	98.72
3iwg_A	276	Acetyltransferase, GNAT family; structural genomic	98.71
3c26_A	266	Putative acetyltransferase TA0821; NP_394282.1, A	98.7
4ava_A	333	Lysine acetyltransferase; allosteric regulation, d	98.69
2qml_A	198	BH2621 protein; structural genomics, joint center	98.65
3r1k_A	428	Enhanced intracellular surviVal protein; GNAT, ace	98.63
2ozg_A	396	GCN5-related N-acetyltransferase; YP_325469.1, ace	98.62
2i00_A	406	Acetyltransferase, GNAT family; structural genomic	98.62
2kcw_A	147	Uncharacterized acetyltransferase YJAB; GNAT fold,	98.62
3tt2_A	330	GCN5-related N-acetyltransferase; structural genom	98.61
2hv2_A	400	Hypothetical protein; PSI, protein structure initi	98.6
3g3s_A	249	GCN5-related N-acetyltransferase; ZP_00874857.1, a	98.59
3n7z_A	388	Acetyltransferase, GNAT family; PSI2, MCSG, struct	98.59
3sxn_A	422	Enhanced intracellular surviVal protein; GNAT fold	98.57
2zpa_A	671	Uncharacterized protein YPFI; RNA modification enz	98.55
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	98.52
2jw5_A	106	DNA polymerase lambda; BRCT domain, family X polym	98.52
2ep8_A	100	Pescadillo homolog 1; A/B/A 3 layers, nucleolus, r	98.45
1xmt_A	103	Putative acetyltransferase; structural genomics, p	98.43
3ii6_X	263	DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alter	98.43
1yk3_A	210	Hypothetical protein RV1347C/MT1389; acyltransfera	98.4
2k6g_A	109	Replication factor C subunit 1; protein, BRCT, DNA	98.39
3huf_A	325	DNA repair and telomere maintenance protein NBS1;	98.38
2coe_A	120	Deoxynucleotidyltransferase, terminal variant; BRC	98.36
2ebu_A	112	Replication factor C subunit 1; A/B/A 3 layers, pa	98.34
1sqh_A	312	Hypothetical protein CG14615-PA; structural genomi	98.34
3tt2_A	330	GCN5-related N-acetyltransferase; structural genom	98.31
1l7b_A	92	DNA ligase; BRCT, autostructure, structural genomi	98.31
1z56_C	264	DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA	98.26
2ft0_A	235	TDP-fucosamine acetyltransferase; GNAT fold acetyl	98.13
2dun_A	133	POL MU, DNA polymerase MU; layers A/B/A, parallel	98.12
1ro5_A	201	Autoinducer synthesis protein LASI; alpha-beta-alp	98.1
3u3z_A	199	Microcephalin; DNA repair, cell cycle regulation,	98.02
1l0b_A	229	BRCA1; TANDEM-BRCT, three-helix bundle, unknown fu	98.0
3pc7_A	88	DNA ligase 3; DNA repair, BRCT domain, protein:pro	97.97
2cok_A	113	Poly [ADP-ribose] polymerase-1; BRCT domain, DNA r	97.97
1p0h_A	318	Hypothetical protein RV0819; GNAT fold, acetyltran	97.93
1t15_A	214	Breast cancer type 1 susceptibility protein; prote	97.9
3p2h_A	201	AHL synthase; acyl-ACP binding, SAM binding, signa	97.85
3shp_A	176	Putative acetyltransferase STHE_0691; PSI-biology,	97.81
1kzf_A	230	Acyl-homoserinelactone synthase ESAI; alpha-beta,	97.71
2nte_A	210	BARD-1, BRCA1-associated ring domain protein 1; BR	97.65
2etx_A	209	Mediator of DNA damage checkpoint protein 1; tande	97.62
1kzy_C	259	Tumor suppressor P53-binding protein 1; tandem-BRC	97.59
1bob_A	320	HAT1, histone acetyltransferase; histone modificat	97.5
3al2_A	235	DNA topoisomerase 2-binding protein 1; BRCT domain	96.5
3dns_A	135	Ribosomal-protein-alanine acetyltransferase; N-ter	96.39
3sqd_A	219	PAX-interacting protein 1; tandem BRCT domains, ce	96.2
2l42_A	106	DNA-binding protein RAP1; BRCT domain, protein bin	95.91
4id3_A	92	DNA repair protein REV1; BRCT domain, protein bind	95.89
2vxb_A	241	DNA repair protein RHP9; BRCT, nucleus, cell cycle	95.77
1dgs_A	667	DNA ligase; AMP complex, NAD+-dependent; HET: DNA	95.55
2ebw_A	97	DNA repair protein REV1; A/B/A 3 layers, parallel	95.21
3s6g_A	460	N-acetylglutamate kinase / N-acetylglutamate SYNT;	95.19
2owo_A	671	DNA ligase; protein-DNA complex, ligase-DNA comple	95.06
4b14_A	385	Glycylpeptide N-tetradecanoyltransferase; malaria,	93.11
1wf6_A	132	Similar to S.pombe -RAD4+/CUT5+product (A40727); B	92.6
2ep8_A	100	Pescadillo homolog 1; A/B/A 3 layers, nucleolus, r	92.5
4gns_A	290	Chitin biosynthesis protein CHS5; FN3, BRCT, tetra	92.16
1yle_A	342	Arginine N-succinyltransferase, alpha chain; struc	91.95
1l7b_A	92	DNA ligase; BRCT, autostructure, structural genomi	91.61
3l46_A	112	Protein ECT2; alternative splicing, guanine-nucleo	91.39
3l3e_A	107	DNA topoisomerase 2-binding protein 1; BRCT domain	91.35
2d8m_A	129	DNA-repair protein XRCC1; parallel beta-sheet, DNA	91.31
3pc6_A	104	DNA repair protein XRCC1; BRCT domain, protein:pro	90.43
3iu1_A	383	Glycylpeptide N-tetradecanoyltransferase 1; N-myri	89.89
2p0w_A	324	Histone acetyltransferase type B catalytic subuni;	89.31
2cou_A	109	ECT2 protein; BRCT domain, RHO GTPase, structural	89.3
3s6k_A	467	Acetylglutamate kinase; synthase, transferase; 2.8	88.44
1iic_A	422	Peptide N-myristoyltransferase; HET: MYA; 2.20A {S	87.98
2l42_A	106	DNA-binding protein RAP1; BRCT domain, protein bin	87.98
1iyk_A	392	Myristoyl-COA:protein N-myristoyltransferase; HET:	87.1
2cok_A	113	Poly [ADP-ribose] polymerase-1; BRCT domain, DNA r	87.02
3pc7_A	88	DNA ligase 3; DNA repair, BRCT domain, protein:pro	85.31
1rxt_A	496	Myristoyl-, glycylpeptide N-tetradecanoyltransfera	84.81
2wuu_A	421	N-myristoyltransferase; acyltransferase; HET: NHM;	84.27
3oq4_A	134	DBF4, protein DNA52; DDK, BRCT, RAD53, replication	83.9
2k6g_A	109	Replication factor C subunit 1; protein, BRCT, DNA	83.48
2ebu_A	112	Replication factor C subunit 1; A/B/A 3 layers, pa	81.82

>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*

Probab=99.96  E-value=1.5e-29  Score=247.53  Aligned_cols=140  Identities=25%  Similarity=0.451  Sum_probs=131.8

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCC
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDE  475 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdE  475 (542)
                      .++++|+|||+.+.+    +.++|++|||.|++++.+|||||++++.||.|||+|++.|+|||+|+||.+|+++|+++||
T Consensus         6 ~~~~~v~fSG~~~~~----~~~~i~~lGg~v~~~~~~~THlV~~~~~RT~K~l~Aia~g~~IVs~~Wl~~~~~~~~~l~e   81 (220)
T 3l41_A            6 SKRVYITFTGYDKKP----SIDNLKKLDMSITSNPSKCTHLIAPRILRTSKFLCSIPYGPCVVTMDWINSCLKTHEIVDE   81 (220)
T ss_dssp             -CCEEEEECSCSSCC----CCGGGGGGTEEECSCTTTCSEEECSSCCCBHHHHHHGGGCCEEECHHHHHHHHHHTSCCCS
T ss_pred             cceEEEEEeccCCCC----CcchHhhcceeeccCchhhhhhhhhhHhhhcceeecCCCCCeEEEhHHHHhhhhhhhcccc
Confidence            457999999999865    3889999999999999899999999999999999999999999999999999999999999


Q ss_pred             CCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCCC--CCCHHHHHHHHHhCCCEEec
Q 009150          476 SSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHI--QPPIKTLSAIVRSAGGNVSS  539 (542)
Q Consensus       476 e~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~v--~p~~~~L~~LIeagGG~V~~  539 (542)
                      ++|+|.+.+.+..+++++.+++.|+++++.+||+|++|||++++  .|++++|+.||++|||+|+.
T Consensus        82 ~~y~l~d~~~e~~~~~~l~~~~~rar~~~~~LF~G~~f~it~~~~~~p~~~~l~~iI~~~GG~v~~  147 (220)
T 3l41_A           82 EPYLLNDPEKELELGCTLESALKRARAQGPSLLEDYVVYLTSKTVAPENVPAVISIVKSNGGVCST  147 (220)
T ss_dssp             GGGBCCCHHHHHHHTSCHHHHHHHHHHHCSCTTTTSEEEEETTSSCGGGHHHHHHHHHHTTCEEEE
T ss_pred             CccccCCcHHHhhccccHHHHHHHHHhcCchhhhheeEEEeccccCCCCCceEEEEEecCCcEech
Confidence            99999999999999999999999998877899999999999998  78899999999999999986

>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}

Probab=99.96  E-value=1.1e-28  Score=240.86  Aligned_cols=144  Identities=31%  Similarity=0.505  Sum_probs=134.4

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCC
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVD  474 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~Ld  474 (542)
                      +..+++|+|||+.+.+ ++.+.+.+++|||.++++...|||||+++..||.|||+|++.|+|||+|+||.+|+++|+++|
T Consensus        13 ~~~~~~i~~SG~~~~~-~~~l~~~i~~lGg~v~~~~~~~THLI~~~~~rT~K~l~A~~~g~~IVs~~Wl~~c~~~~~~l~   91 (219)
T 3sqd_A           13 PELTPFVLFTGFEPVQ-VQQYIKKLYILGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRCQKFID   91 (219)
T ss_dssp             GGGCCEEEECSCCHHH-HHHHHHHHHHTTCEECSSGGGCSEEECSSCCCCHHHHHHTTTCSEEECHHHHHHHHHHTSCCC
T ss_pred             CCCCeEEEEeCCChHH-HHHHHHHHHHCCCEEeCCCCCceEEEECCCCCCHHHHHHHHcCCCEecHHHHHHHHHcCCCCC
Confidence            3567999999998765 678999999999999998899999999999999999999999999999999999999999999


Q ss_pred             CCCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          475 ESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       475 Ee~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      |++|++.+.+.+..|++++.+++.+++.  .+||+|++|||++++.|+++.|++||+++||+|+.++
T Consensus        92 e~~y~l~d~~~e~~~~~~l~~~l~ra~~--~~LF~G~~f~it~~~~~~~~~l~~lI~~~GG~v~~~~  156 (219)
T 3sqd_A           92 EQNYILRDAEAEVLFSFSLEESLKRAHV--SPLFKAKYFYITPGICPSLSTMKAIVECAGGKVLSKQ  156 (219)
T ss_dssp             SGGGBCCCHHHHHHTTCCHHHHHHHHHH--SCTTTTEEEEECTTCSSCHHHHHHHHHHTTCEEESSC
T ss_pred             hHhccCCCchhhhhcCCChHHHhhhhcc--ccccCCcEEEEeCCCCCCHHHHHHHHHHCCCEEECCC
Confidence            9999999999999999999998888764  5799999999999999999999999999999999864

>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A

Probab=99.95  E-value=7.4e-28  Score=232.16  Aligned_cols=140  Identities=28%  Similarity=0.561  Sum_probs=128.8

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCC
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDE  475 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdE  475 (542)
                      .++++|+|||+.+++    +.+.|++|||.+++++..|||||++++.||.|||+|++.|+|||+++||.+|+++|+++||
T Consensus        10 ~~~~~v~~sG~~~~~----~~~~i~~lGg~~~~~~~~~THlI~~~~~rt~K~l~a~~~g~~IV~~~Wl~~~~~~~~~l~e   85 (209)
T 2etx_A           10 STAPKVLFTGVVDAR----GERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGFFLPP   85 (209)
T ss_dssp             --CCEEEECSSCCHH----HHHHHHHTTCEECSSTTTCSEEECSSCCCSHHHHHHHHHTCCEECTHHHHHHHHHTSCCCS
T ss_pred             CCCcEEEEeCCCcHH----HHHHHHHCCCEEeCCCCCceEEEECCCCCCHHHHHHHhcCCccccHHHHHHHHHcCCCCCh
Confidence            457999999999754    4789999999999998889999999999999999999999999999999999999999999


Q ss_pred             CCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          476 SSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       476 e~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      ++|+|.+.+.+..|++++.+++.+++.+  +||+|++||+++...++.+.|++||+++||+|+..+
T Consensus        86 ~~y~~~~~~~~~~~~~~l~~~~~~a~~~--~lF~g~~~~~~~~~~~~~~~l~~li~~~GG~v~~~~  149 (209)
T 2etx_A           86 DEYVVTDPEQEKNFGFSLQDALSRARER--RLLEGYEIYVTPGVQPPPPQMGEIISCCGGTYLPSM  149 (209)
T ss_dssp             GGGBCCCHHHHHHTTCCHHHHHHHHHHS--CTTTTCEEEECTTCSSCHHHHHHHHHHTTCEECSSC
T ss_pred             hhccccChhhhhhcCCCHHHHHhhhhhC--CCcCCcEEEEeCCCCCCHHHHHHHHHHCCCEEECCC
Confidence            9999999999999999999988888764  799999999999988899999999999999998753

>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*

Probab=99.94  E-value=6.1e-27  Score=230.92  Aligned_cols=145  Identities=23%  Similarity=0.434  Sum_probs=116.9

Q ss_pred             CCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEecc--C-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150          394 SNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSD--G-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREG  470 (542)
Q Consensus       394 s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d--~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~G  470 (542)
                      +..+.++|+|||+.+++ ++.+.++|++|||.++++  + ++|||||++++.||+|||+|||+|+|||+++||.+|+++|
T Consensus         5 ~~~~~~~~~~Sg~~~~~-~~~l~~~i~~LGg~~~~~~~~~~~~THlV~~~~~RT~K~l~aia~G~wIvs~~wl~~s~~~g   83 (235)
T 3al2_A            5 SLKKQYIFQLSSLNPQE-RIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEACRTAG   83 (235)
T ss_dssp             ---CCCEEEEESCCHHH-HHHHHHHHHHTTCEECCSSSCCTTCCEEEESSCCCSHHHHHHHHTTCEEECTHHHHHHHHHT
T ss_pred             cCCCCEEEEEcCCCHHH-HHHHHHHHHHcCCEEeccCCCCCCCcEEEECCCCCCHHHHHHHHcCCcCccHHHHHHHHHcC
Confidence            44578999999998655 678999999999999863  4 8999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccCCchhhh---hcCCC---hHHHHHHhhc----CC-----CCCCCCeEEEEeCCCCCCHHHHHHHHHhCCC
Q 009150          471 RFVDESSYMLNDDDYVL---KYRSE---LKDSVLRAKA----RP-----GGLLRGYNIIMAAHIQPPIKTLSAIVRSAGG  535 (542)
Q Consensus       471 k~LdEe~YeL~d~~~e~---~~g~~---L~~sl~rAr~----~~-----~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG  535 (542)
                      +|+||++|+|.+...+.   .+++.   +..+..++|.    ++     .+||+||+|+|..+ .+..+.|++||++|||
T Consensus        84 ~~l~E~~ye~~~~~~~d~~~~~~~~~~~l~~a~~r~R~~l~~~~~~g~~~~lF~g~~v~l~~~-~~~~~~l~~ii~agGg  162 (235)
T 3al2_A           84 HFVQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKIQQRQESGIVEGAFSGWKVILHVD-QSREAGFKRLLQSGGA  162 (235)
T ss_dssp             SCCCSGGGBTTSHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHTTTCCSSTTTTCEEEEECC-HHHHHHHHHHHHHTTC
T ss_pred             CCCChhceeecCcchhccccCCChhhhHHHHHHHHHHHHHHhcccccccCCCCCCcEEEEecC-CCcHHHHHHHHHcCCc
Confidence            99999999999986542   23321   2233333221    11     58999999999875 3446899999999999


Q ss_pred             EEecc
Q 009150          536 NVSSK  540 (542)
Q Consensus       536 ~V~~~  540 (542)
                      +|+..
T Consensus       163 ~vl~~  167 (235)
T 3al2_A          163 KVLPG  167 (235)
T ss_dssp             EECSS
T ss_pred             EEecC
Confidence            99864

>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*

Probab=99.92  E-value=4.6e-25  Score=212.10  Aligned_cols=141  Identities=24%  Similarity=0.447  Sum_probs=116.3

Q ss_pred             CeEEEEcccCChhhHHHHHHHHHHcCc-EEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCC
Q 009150          398 CFRIMLMNIADDSKKVHLTKVIEDLGG-AVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDE  475 (542)
Q Consensus       398 ~~rVlfSG~~de~kk~~L~kiIkkLGG-~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdE  475 (542)
                      ...+++||+.+++ ++.+.+++++||| .+.+++ +.|||||++++.||+|||.|+++|+|||+++||.+|+++|+|+||
T Consensus        11 ~~~~~~sgl~~~~-~~~l~~~i~~lgG~~~~~~~~~~~THlv~~~~~rT~K~l~ai~~g~~Iv~~~Wv~~~~~~g~~l~e   89 (199)
T 3u3z_A           11 TRTLVMTSMPSEK-QNVVIQVVDKLKGFSIAPDVCETTTHVLSGKPLRTLNVLLGIARGCWVLSYDWVLWSLELGHWISE   89 (199)
T ss_dssp             CCEEEEESCCHHH-HHHHHHHHHHHCSCEEESSCCTTEEEEEESSCCCBHHHHHHHHTTCEEEETHHHHHHHHHTSCCCS
T ss_pred             CeEEEEcCCCHHH-HHHHHHHHHHcCCcEEecCCCCCCeEEEECCCCCCHHHHHHHHCCCcEEeHHHHHHHhhCCCCCCh
Confidence            3577789998765 6789999999988 565666 779999999999999999999999999999999999999999999


Q ss_pred             CCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeE-EEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          476 SSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYN-IIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       476 e~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~-f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      ++|+|.+...+... ..+.. ..+++++..+||+|+. ||+++...++++.|++||+++||+|+..+
T Consensus        90 ~~y~~~~~~~~~~~-~rl~r-~~~~~~~~~~LF~g~~~~~v~~~~~~~~~~L~~lI~~~GG~v~~~~  154 (199)
T 3u3z_A           90 EPFELSHHFPAAPL-CRSEC-HLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLCGGRVSQVP  154 (199)
T ss_dssp             GGGBCTTTCTHHHH-HHHHH-HHCSSSCCCCTTTTSCCEEECTTCSSCHHHHHHHHHHTTCCBCSSG
T ss_pred             hhccccCCcccccc-chhhh-hhhcccccchhhCCCeEEEECCCCCCCHHHHHHHHHHcCCEEeccC
Confidence            99999987543221 11221 1223455678999995 77888888899999999999999998754

>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3

Probab=99.91  E-value=6.9e-24  Score=204.85  Aligned_cols=141  Identities=18%  Similarity=0.330  Sum_probs=116.3

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCC-----CCcHHHHHHHhcCCeEeCHHHHHHHHHc
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKV-----RKTLNFLTALCSGAWIVSPNWLKESFRE  469 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~-----~RTlKfL~AIA~G~wIVSpsWL~dSlk~  469 (542)
                      .+++.|++||+.+++ +..+.++++++||.+.+++ ..|||||+...     .||.||+.|++.|+|||+++||.+|+++
T Consensus         5 ~~~~~i~~sg~~~~~-~~~l~~~~~~~G~~~~~~~~~~~THlI~~~~~~~~~~rt~K~~~a~~~g~~IV~~~Wl~~~~~~   83 (229)
T 1l0b_A            5 ERDISMVVSGLTPKE-VMIVQKFAEKYRLALTDVITEETTHVIIKTDAEFVCERTLKYFLGIAGGKWIVSYSWVIKSIQE   83 (229)
T ss_dssp             CCCCEEEEESCCHHH-HHHHHHHHHHTTCEECSSCCSSCCEEEECBCTTSEECCCHHHHHHHHTTCEEEETHHHHHHHTT
T ss_pred             CCCeEEEEcCCCHHH-HHHHHHHHHHcCCEEeCCcCCCCCEEEEcCCccccccccHHHHHHHHCCCcEecHHHHHHHHHC
Confidence            456899999998766 7789999999999999987 78999999987     8999999999999999999999999999


Q ss_pred             CCCCCCCCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeC-CCCCCHHHHHHHHHhCCCEEeccC
Q 009150          470 GRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAA-HIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       470 Gk~LdEe~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~-~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      |+++||++|++.+.....    .......+++.++.+||+|+.||+.. ...+.++.|++||+++||+|+..+
T Consensus        84 ~~~~~e~~y~~~~~~~~~----~~~~~~~~~r~~~~~lF~g~~~~~~~~~~~~~~~~l~~li~~~GG~v~~~~  152 (229)
T 1l0b_A           84 RKLLSVHEFEVKGDVVTG----SNHQGPRRSRESQEKLFEGLQIYCCEPFTNMPKDELERMLQLCGASVVKEL  152 (229)
T ss_dssp             TSCCCSGGGBCCEETTTC----SSSCHHHHHHHHC--CCTTCEEEECSCCSSSCHHHHHHHHHHTTCEEECSS
T ss_pred             CCcCChHHeEeccccccc----cccccchhhhhhhhhhhcCceEEEEecCCCCCHHHHHHHHHHCCCEEeCCc
Confidence            999999999998754321    11112223333456899999999965 455679999999999999998764

>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A

Probab=99.90  E-value=1.9e-23  Score=200.31  Aligned_cols=132  Identities=21%  Similarity=0.339  Sum_probs=112.8

Q ss_pred             CeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECC--CCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCC
Q 009150          398 CFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGK--VRKTLNFLTALCSGAWIVSPNWLKESFREGRFVD  474 (542)
Q Consensus       398 ~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k--~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~Ld  474 (542)
                      ++.|++||+.+++ +..+.+++++|||.+.+++ +.|||||+..  ..||+|||.|++.|+|||+++||.+|+++|+++|
T Consensus         2 ~~vi~~sg~~~~~-~~~l~~~~~~~G~~~~~~~~~~~THlV~~~~~~~rt~K~l~a~~~g~~IV~~~Wl~~c~~~~~~~~   80 (210)
T 2nte_A            2 PLVLIGSGLSSEQ-QKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRRKVCEQ   80 (210)
T ss_dssp             CCEEEESSCCHHH-HHHHHHHHHHTTCEEESSCCTTCCEEEESSSSCCCSHHHHHHHHTTCEEEETHHHHHHHHHTSCCC
T ss_pred             CEEEEECCCCHHH-HHHHHHHHHHcCCEEeCCCCCCCeEEEEcCCCcchHHHHHHHHhcCCEEecHHHHHHHHHcCCcCC
Confidence            4789999998755 7889999999999999998 6999999987  7999999999999999999999999999999999


Q ss_pred             CCCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCC-CCCCHHHHHHHHHhCCCEEec
Q 009150          475 ESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAH-IQPPIKTLSAIVRSAGGNVSS  539 (542)
Q Consensus       475 Ee~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~-v~p~~~~L~~LIeagGG~V~~  539 (542)
                      |++|++.+..        ...++.+ .+...+||+|+.||++.. ..++++.|++||+++||+|+.
T Consensus        81 e~~y~~~~~~--------~~~r~~~-~~~~~~lF~g~~~~l~~~~~~~~~~~l~~lI~~~GG~v~~  137 (210)
T 2nte_A           81 EEKYEIPEGP--------RRSRLNR-EQLLPKLFDGCYFYLWGTFKHHPKDNLIKLVTAGGGQILS  137 (210)
T ss_dssp             GGGTBCTTHH--------HHHHHHH-HTTCCCTTTTCEEEECSCCSSSCHHHHHHHHHHTTCEEES
T ss_pred             hhhccCCCCC--------hhhhhcc-ccccccccCceEEEEeccCCCCCHHHHHHHHHHCCCEEEe
Confidence            9999998631        1112222 224578999999999864 456799999999999999986

>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A

Probab=99.90  E-value=2.1e-23  Score=198.56  Aligned_cols=140  Identities=20%  Similarity=0.338  Sum_probs=116.2

Q ss_pred             CCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCC-----CCcHHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150          397 KCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKV-----RKTLNFLTALCSGAWIVSPNWLKESFREG  470 (542)
Q Consensus       397 k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~-----~RTlKfL~AIA~G~wIVSpsWL~dSlk~G  470 (542)
                      +++.|++||+.+++ ++.+.++++++||.+.+++ +.|||||++..     .||+|||.|++.|+|||+++||.+|+++|
T Consensus         3 ~~~~~~~sg~~~~~-~~~l~~~~~~~G~~~~~~~~~~~THli~~~~~~~~~~rt~k~~~a~~~g~~IV~~~Wl~~~~~~~   81 (214)
T 1t15_A            3 KRMSMVVSGLTPEE-FMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKER   81 (214)
T ss_dssp             -CCEEEEESCCHHH-HHHHHHHHHHHTCEECSSCCTTCCEEEECBCTTSEECCBHHHHHHHHTTCEEEETHHHHHHHHTT
T ss_pred             CcEEEEECCCCHHH-HHHHHHHHHHhCCEEeCccCCCCcEEEEeCCcccchhhhHHHHHHHhcCCEEeCHHHHHHHHHCC
Confidence            56899999998654 7889999999999999987 78999999987     89999999999999999999999999999


Q ss_pred             CCCCCCCcccCCchhhhhcCCChHHHHHHhhc-CCCCCCCCeEEEEeCC-CCCCHHHHHHHHHhCCCEEeccC
Q 009150          471 RFVDESSYMLNDDDYVLKYRSELKDSVLRAKA-RPGGLLRGYNIIMAAH-IQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       471 k~LdEe~YeL~d~~~e~~~g~~L~~sl~rAr~-~~~~LF~G~~f~Is~~-v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      +++||++|++.+...+..    ......+++. ...+||+|++||+... ..++++.|+.||+++||+|+..+
T Consensus        82 ~~~~e~~y~~~~~~~~~~----~~~~~~~~r~~~~~~lF~g~~~~~~~~~~~~~~~~l~~li~~~GG~v~~~~  150 (214)
T 1t15_A           82 KMLNEHDFEVRGDVVNGR----NHQGPKRARESQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKEL  150 (214)
T ss_dssp             SCCCGGGGBCCEETTTBT----TCCHHHHHHTCTTSCTTTTCEEEECSCCSSSCHHHHHHHHHHTTCEECCSG
T ss_pred             CcCChHHeEeeccccccc----cccchhhHhhcCCCcccCCCEEEEEecCCCCCHHHHHHHHHHCCCEEecCc
Confidence            999999999987543211    1122233332 3567999999999653 45679999999999999998754

>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B

Probab=99.78  E-value=3.2e-19  Score=177.97  Aligned_cols=124  Identities=14%  Similarity=0.211  Sum_probs=102.2

Q ss_pred             hHHHHHHHHHHcCcEEeccCCc-------eeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCCCCcccCCc
Q 009150          411 KKVHLTKVIEDLGGAVTSDGST-------STHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDD  483 (542)
Q Consensus       411 kk~~L~kiIkkLGG~V~~d~~~-------~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdEe~YeL~d~  483 (542)
                      .|.+|++.|+.+||+|+.++..       +||||++...||.|||.|++.|+|||+++||.+|+++|+++|+++|.+.+.
T Consensus        59 ~k~~l~~~I~~~GG~v~~~~~~~~~~~~~~t~LIa~~~~rt~K~l~ala~g~~iVs~~Wl~dc~~~~~~l~~~~Y~l~~g  138 (259)
T 1kzy_C           59 NKQYTESQLRAGAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAG  138 (259)
T ss_dssp             CHHHHHHHHHTTTCEECSSCCTTTTTTTCEEEEEESSCCCSHHHHHHHHHTCCEEETHHHHHHHHHTSCCCGGGSBCCCE
T ss_pred             cHHHHHHHHHHCCCEEecCccccccccCCCeEEEcCCCCCcHHHHHHHhcCCCCccHHHHHHHHHcCCcCCHHHccCCCC
Confidence            4578999999999999988743       689999999999999999999999999999999999999999999999875


Q ss_pred             hhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCCCCC-CHHHHHHHHHhCCCEEeccC
Q 009150          484 DYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQP-PIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       484 ~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~v~p-~~~~L~~LIeagGG~V~~~L  541 (542)
                      ...       .........++.+||+|++|||++...+ ..+.+..|++++||+++.++
T Consensus       139 ~s~-------~~~~~~~~~~~~~LF~G~~I~i~~~~~~~~~~~~~~Il~~~Ga~vv~~~  190 (259)
T 1kzy_C          139 YSL-------EEQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQH  190 (259)
T ss_dssp             EET-------TTTEEECCCCCCCTTTTCEEEEEESCTTTTHHHHHHHHHHTTCSEEEEE
T ss_pred             ccc-------ccchhhhccccCCCCCCeEEEEecCCCCCHHHHHHHHHHhcCCEEEecc
Confidence            421       1110011123468999999999988765 46788999999999998654

>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*

Probab=99.71  E-value=3.9e-17  Score=161.44  Aligned_cols=141  Identities=21%  Similarity=0.213  Sum_probs=109.1

Q ss_pred             CCeEEEEccc--CChhhHHHHHHHHHHcCcEEecc--------CC-------------------ceeEEEECCCCCcHHH
Q 009150          397 KCFRIMLMNI--ADDSKKVHLTKVIEDLGGAVTSD--------GS-------------------TSTHVVTGKVRKTLNF  447 (542)
Q Consensus       397 k~~rVlfSG~--~de~kk~~L~kiIkkLGG~V~~d--------~~-------------------~~THLIt~k~~RTlKf  447 (542)
                      .+..|++|+.  .++..+.+++++|+++||+|.++        ..                   ..||||++...||.||
T Consensus         4 ~g~~F~ls~~~~~~~~~k~~L~~~I~~~GG~v~~~g~~~lf~~~~~~~~~~~~~~k~~~~~~~~~~t~lia~~~~rt~K~   83 (241)
T 2vxb_A            4 DDCVFAFSGPVHEDAYDRSALETVVQDHGGLVLDTGLRPLFNDPFKSKQKKLRHLKPQKRSKSWNQAFVVSDTFSRKVKY   83 (241)
T ss_dssp             TTEEEEECCCSSTTSSCHHHHHHHHHHTTCEECTTCSGGGBCCSCC----CCCSCCBCGGGGGCSEEEEECSSCCCCHHH
T ss_pred             CCcEEEEecCCCCchhhHHHHHHHHHHCCCEEecCcchhhccCccccccccccccccccccccccceEEEcCCCCCcHHH
Confidence            3578899998  44456789999999999999986        11                   2599999999999999


Q ss_pred             HHHHhcCCeEeCHHHHHHHHHcCCCCCCCCcccCCchhhhhcC--------CChHHHHHHhhcCCCCCCCCeEEEEeCCC
Q 009150          448 LTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYR--------SELKDSVLRAKARPGGLLRGYNIIMAAHI  519 (542)
Q Consensus       448 L~AIA~G~wIVSpsWL~dSlk~Gk~LdEe~YeL~d~~~e~~~g--------~~L~~sl~rAr~~~~~LF~G~~f~Is~~v  519 (542)
                      +.|++.|+|||+|+||.+|+++++++|+++|.|.+.......+        ++....+..+.+++..||.|++|++..+.
T Consensus        84 ~~ala~gipiV~~~Wi~dc~~~~~~~~~~~ylL~~~~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~Lf~g~~i~~~~~~  163 (241)
T 2vxb_A           84 LEALAFNIPCVHPQFIKQCLKMNRVVDFSPYLLASGYSHRLDCTLSQRIEPFDTTDSLYDRLLARKGPLFGKKILFIIPE  163 (241)
T ss_dssp             HHHHHHTCCEECTHHHHHHHHHTSCCCSGGGBBEEEEETTTTEEEECCCCCCCTTSCHHHHHHHCCCTTTTCEEEECCCC
T ss_pred             HHHHHcCCCEecHHHHHHHHHcCCcCChhhccCCCCcchhccchhhccccCCChhhHHHHHHhhcCcCCCCcEEEEEeCC
Confidence            9999999999999999999999999999999998765432211        11111122222345689999999997543


Q ss_pred             CC-C------------HHHHHHHHHhCCCEE
Q 009150          520 QP-P------------IKTLSAIVRSAGGNV  537 (542)
Q Consensus       520 ~p-~------------~~~L~~LIeagGG~V  537 (542)
                      .. +            .+.+..|++++||++
T Consensus       164 ~~~~~~~~~~~~~g~~~~~~~~i~~~~Ga~~  194 (241)
T 2vxb_A          164 AKSWQKKIENTEQGQKALAHVYHALALGADV  194 (241)
T ss_dssp             ------------CHHHHHHHHHHHHHTTCEE
T ss_pred             CcccccccccccccchHHHHHHHHHHcCCce
Confidence            22 2            378999999999999

>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*

Probab=99.60  E-value=3e-15  Score=152.26  Aligned_cols=128  Identities=19%  Similarity=0.276  Sum_probs=109.0

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCC
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFV  473 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~L  473 (542)
                      ..++..|++||+.++ .+..+.++|+.+||++..++ .+|||||++.. +|.||..|+..|+|||+|+||.+|++.++.+
T Consensus       105 ~l~g~~~~~tG~~~~-~r~~l~~~i~~~GG~v~~~~t~~tTHLI~~~~-~t~Ky~~A~~~gi~IV~~~Wl~~c~~~~~~~  182 (298)
T 3olc_X          105 VMSDVTISCTSLEKE-KREEVHKYVQMMGGRVYRDLNVSVTHLIAGEV-GSKKYLVAANLKKPILLPSWIKTLWEKSQEK  182 (298)
T ss_dssp             TTTTCEEEEESCCHH-HHHHHHHHHHHTTCEECSSCCTTCCEEEESSS-CSHHHHHHHHTTCCEECHHHHHHHHHHHHTT
T ss_pred             ccCCeEEEeCCCcHH-hHHHHHHHHHHCCCEEecCcCCCeeEEEEeCC-CChHHHHHHHCCCeEeeHHHHHHHHHcCCcC
Confidence            356799999999876 48899999999999999998 79999999985 6999999999999999999999999999988


Q ss_pred             CCCCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          474 DESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       474 dEe~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      +...|.  +.        ..       ...+.++|+|+.|++++...+.++.++.+|+..||+++..|
T Consensus       183 ~~~~~~--~~--------~~-------~~~~~~~f~g~~i~~tG~~~~~r~~l~~li~~~GG~~~~~l  233 (298)
T 3olc_X          183 KITRYT--DI--------NM-------EDFKCPIFLGCIICVTGLCGLDRKEVQQLTVKHGGQYMGQL  233 (298)
T ss_dssp             CCSSGG--GS--------CG-------GGGBCCTTTTCEEEECSCCHHHHHHHHHHHHHTTCEECSSC
T ss_pred             Cccccc--cc--------cc-------ccccccccCCeEEEEeCCCCccHHHHHHHHHHcCCEEecee
Confidence            766551  11        01       12346799999999998777678999999999999998764

>1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A*

Probab=99.57  E-value=3.4e-14  Score=126.09  Aligned_cols=142  Identities=20%  Similarity=0.358  Sum_probs=112.4

Q ss_pred             ccchhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeee
Q 009150           85 DSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPL  164 (542)
Q Consensus        85 ~~~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~  164 (542)
                      ++.....|.++.++|..++|.+.        .+|+.+...+.....+....    +++++||.+.+.... +..+++|..
T Consensus        11 ~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~vG~~~~~~~~-~~~~~~i~~   77 (160)
T 1qst_A           11 THRNMKLLIDLKNIFSRQLPKMP--------KEYIVKLVFDRHHESMVILK----NKQKVIGGICFRQYK-PQRFAEVAF   77 (160)
T ss_dssp             CHHHHHHHHHHHHHHHHHCTTSC--------HHHHHHHHTSSSEEEEEEEE----TTTEEEEEEEEEEEG-GGTEEEEEE
T ss_pred             chHHHHHHHHHHHHhhhhcchhH--------HHHHHHHhhCCCCceEEEEe----cCCEEEEEEEEEEec-CCCeEEEEE
Confidence            67778889999999999999988        66787775455544444432    467999999887664 446889999


Q ss_pred             eeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccccc---cccCCCCCCCceeEEE--Ee
Q 009150          165 AAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVSL---KFCFPVKPCEKSSLVT--VN  239 (542)
Q Consensus       165 ~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~~~---~~~~~~~~c~ea~lm~--l~  239 (542)
                      ++|+|+|||+|||+.|++++++.+++.|+..+.+.+.+.|..||+|+||+..+....   ...+..  ...+.+|.  |.
T Consensus        78 ~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~l~~~~~n~a~~~y~k~Gf~~~~~~~~~~~~~~~~~--~~~~~~m~~~l~  155 (160)
T 1qst_A           78 LAVTANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFTKEHRMPQEKWKGYIKD--YDGGTLMECYIH  155 (160)
T ss_dssp             EEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHTTCBSSCSSCHHHHTTTSCC--CSSSEEEEEECC
T ss_pred             EEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEeCcchhHHHHHHCCCEEeeeeccccceeEEec--CCCceEEeeecc
Confidence            999999999999999999999999999999999888878999999999999987621   112222  34478887  54


Q ss_pred             cc
Q 009150          240 RS  241 (542)
Q Consensus       240 ~~  241 (542)
                      ..
T Consensus       156 ~~  157 (160)
T 1qst_A          156 PY  157 (160)
T ss_dssp             TT
T ss_pred             cC
Confidence            43

>1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1

Probab=99.55  E-value=5.5e-14  Score=126.84  Aligned_cols=147  Identities=21%  Similarity=0.371  Sum_probs=114.7

Q ss_pred             EEeeCCCCccccchhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeecc
Q 009150           75 FVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVP  154 (542)
Q Consensus        75 ~~~~~~~~~~~~~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~  154 (542)
                      |.++...+  .++....|..+.++|..++|.++        .+|+.+.+.+..+..+.+..    ++|++||.+.+...+
T Consensus         4 ~r~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~v~~----~~~~ivG~~~~~~~~   69 (164)
T 1ygh_A            4 FRVVNNDN--TKENMMVLTGLKNIFQKQLPKMP--------KEYIARLVYDRSHLSMAVIR----KPLTVVGGITYRPFD   69 (164)
T ss_dssp             EEEECCSS--CHHHHHHHHHHHHHHHHHCTTSC--------HHHHHHHHHCTTCEEEEEEE----TTTEEEEEEEEEEEG
T ss_pred             EEEecCCC--chhhHHHHHHHHHHHHhhcccCC--------HHHHHHHhhCCCceEEEEEC----CCCEEEEEEEEEEcC
Confidence            34444443  46677889999999999999999        89999988887776644433    467999999887664


Q ss_pred             CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccccchhhhhhcCcccccccccc--ccCCCCCCC
Q 009150          155 ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDKESEGFWHKQDTSADTAVSLK--FCFPVKPCE  231 (542)
Q Consensus       155 ~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~~~~--~~~~~~~c~  231 (542)
                       ...+++|..++|+|+|||+|||+.|++++++++++ .|+..+.+.+.+.|..||+|+||+..+.....  ..|.. ++.
T Consensus        70 -~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~~~a~~~~g~~~l~v~~~n~a~~~y~k~GF~~~~~~~~~~~~~~~~-~~~  147 (164)
T 1ygh_A           70 -KREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYADNYAIGYFKKQGFTKEITLDKSIWMGYIK-DYE  147 (164)
T ss_dssp             -GGTEEEEEEEEECTTCCCTTHHHHHHHHHHHHHHHHSCCCEEEEEECGGGHHHHHHTTCBSSCCSCHHHHBTTBC-CTT
T ss_pred             -CCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEecCChHHHHHHHcCCEecceeccceEEEEEE-Eec
Confidence             33578899999999999999999999999999999 99997777777789999999999998876321  11211 234


Q ss_pred             ceeEEE
Q 009150          232 KSSLVT  237 (542)
Q Consensus       232 ea~lm~  237 (542)
                      .+.+|.
T Consensus       148 ~~~~m~  153 (164)
T 1ygh_A          148 GGTLMQ  153 (164)
T ss_dssp             CCEEEE
T ss_pred             CeEEEE
Confidence            478888

>3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A

Probab=99.55  E-value=1.8e-14  Score=142.96  Aligned_cols=131  Identities=12%  Similarity=0.223  Sum_probs=109.3

Q ss_pred             CCCeEEEEcccC-ChhhHHHHHHHHHHcCcEEeccC---CceeEEEECCCCCcHHHHHHHhcCC--eEeCHHHHHHHHHc
Q 009150          396 GKCFRIMLMNIA-DDSKKVHLTKVIEDLGGAVTSDG---STSTHVVTGKVRKTLNFLTALCSGA--WIVSPNWLKESFRE  469 (542)
Q Consensus       396 ~k~~rVlfSG~~-de~kk~~L~kiIkkLGG~V~~d~---~~~THLIt~k~~RTlKfL~AIA~G~--wIVSpsWL~dSlk~  469 (542)
                      +-.++.++||+. .+- .+.=.+.++.||..|++++   ..|+|||+++..||.|||.|+|.|.  +||+|+||.+|++.
T Consensus        20 ~~~i~ai~TGc~~~~~-~~~D~~~Lr~LGI~Iv~d~~~~~~~n~LiAPkilRT~KFL~sLa~~P~~~il~p~FI~~~Lk~   98 (256)
T 3t7k_A           20 NYDLKAVCTGCFHDGF-NEVDIEILNQLGIKIFDNIKETDKLNCIFAPKILRTEKFLKSLSFEPLKFALKPEFIIDLLKQ   98 (256)
T ss_dssp             CCCEEEEESSSCSSCC-CHHHHHHHHHTTEEECSSCCGGGCCCEEECSSCCCBHHHHHHTTSTTCCEEECTHHHHHHHHH
T ss_pred             CeeEEEEecCCccccc-CHHHHHHHHHcCeEEEecCcccCCCCEEEcCchhhHHHHHHHhccCccceEeCHHHHHHHHHH
Confidence            346899999998 432 2344688999999999998   5799999999999999999999986  59999999999998


Q ss_pred             ---CC------CCCCCCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCe---EEEEeCCCCCCHHHHHHHHHhCCCEE
Q 009150          470 ---GR------FVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGY---NIIMAAHIQPPIKTLSAIVRSAGGNV  537 (542)
Q Consensus       470 ---Gk------~LdEe~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~---~f~Is~~v~p~~~~L~~LIeagGG~V  537 (542)
                         |+      .+|.++|.+.|.+.|.     +    .| ++++++||+|+   .|+++.++.-..+.++.|++++||.=
T Consensus        99 ih~~~~~~~~~~l~~~dY~L~d~~~E~-----l----~r-~~~~gkLf~~~~I~ciNls~dI~GG~e~issIleahG~~~  168 (256)
T 3t7k_A           99 IHSKKDKLSQININLFDYEINGINESI-----I----SK-TKLPTKVFERANIRCINLVNDIPGGVDTIGSVLKAHGIEK  168 (256)
T ss_dssp             HC-------CCCCCSSTTBCTTCCHHH-----H----HH-TTSSSCHHHHTTCCEEEEETTCTTCHHHHHHHHHHTTCCE
T ss_pred             hhcCCcccccccCChhhccCCCcchhH-----H----hh-hccccccccCCcceeeeeccCCCCCHHHHHHHHHHcCCce
Confidence               87      8999999999987651     2    23 45678999999   56669999888999999999999953

>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.49  E-value=1.3e-13  Score=123.75  Aligned_cols=90  Identities=19%  Similarity=0.278  Sum_probs=81.2

Q ss_pred             cCCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCC
Q 009150          393 QSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGR  471 (542)
Q Consensus       393 ~s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk  471 (542)
                      ...-.+..|+|||+.... |..+.++|+.+||+|..++ ..|||||++.. ++.||..|...|++||+++||.+|+++++
T Consensus        20 ~~~f~g~~i~itG~~~~~-r~~l~~~i~~~Gg~v~~~~s~~~ThLI~~~~-~~~K~~~A~~~gi~IV~~~Wl~d~~~~~~   97 (129)
T 2d8m_A           20 GKILQGVVVVLSGFQNPF-RSELRDKALELGAKYRPDWTRDSTHLICAFA-NTPKYSQVLGLGGRIVRKEWVLDCHRMRR   97 (129)
T ss_dssp             TTTSTTEEEEEESCCTTH-HHHHHHHHHHTTEEEESSCCTTCCEEEESSS-SCHHHHHHHHHTCEEEETHHHHHHHHTTS
T ss_pred             cccCCCeEEEEeCCCcHH-HHHHHHHHHHcCCEEeCCcCCCCeEEEecCC-CChHHHHHHHCCCcEecHHHHHHHHHhCC
Confidence            344678999999998654 7889999999999999987 78999999964 68999999999999999999999999999


Q ss_pred             CCCCCCcccCCch
Q 009150          472 FVDESSYMLNDDD  484 (542)
Q Consensus       472 ~LdEe~YeL~d~~  484 (542)
                      ++||++|.+....
T Consensus        98 ~l~e~~Y~l~~~~  110 (129)
T 2d8m_A           98 RLPSQRYLMAGPG  110 (129)
T ss_dssp             CCCGGGGBCSSSS
T ss_pred             cCChHhcccCCCC
Confidence            9999999988764

>1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B*

Probab=99.48  E-value=3.2e-13  Score=120.09  Aligned_cols=148  Identities=24%  Similarity=0.357  Sum_probs=105.6

Q ss_pred             eEEeeCCCCcccc---chhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEe
Q 009150           74 IFVLVNPKDAEDS---CSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITY  150 (542)
Q Consensus        74 ~~~~~~~~~~~~~---~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~  150 (542)
                      .|..++.... ++   .....|.+..+.|..+.|.+.        .+|+.+...+..+..++..     +++++||.+.+
T Consensus         6 ~~r~i~~~~~-~~~~~~d~~~l~~l~~~f~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-----~~~~~vG~~~~   71 (168)
T 1z4r_A            6 EFHVIGNSLT-PKANRRVLLWLVGLQNVFSHQLPRMP--------KEYIARLVFDPKHKTLALI-----KDGRVIGGICF   71 (168)
T ss_dssp             EEEEECCSSC-TTSCHHHHHHHHHHHHHHHHHCTTSC--------HHHHHHHHTCTTCEEEEEE-----ETTEEEEEEEE
T ss_pred             EEEEEccCCC-CCCchhHHHHHHHHHHhccCcCcccc--------HHHHHHHHhCCCcEEEEEE-----ECCEEEEEEEE
Confidence            3455555533 22   223333333345777777666        5677777555555554443     36799999988


Q ss_pred             eeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccccccccc--ccCCCC
Q 009150          151 QIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVSLK--FCFPVK  228 (542)
Q Consensus       151 ~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~~~~--~~~~~~  228 (542)
                      ...+ +..+++|..++|+|+|||+|||+.|++++++++++.|+..+.+..+..|..||+|+||+..+....-  ..|.+ 
T Consensus        72 ~~~~-~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~~~~~~~~~a~~~y~k~GF~~~~~~~~~~~~~y~g-  149 (168)
T 1z4r_A           72 RMFP-TQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIK-  149 (168)
T ss_dssp             EEET-TTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHTTEESCCCSCHHHHTTTSC-
T ss_pred             EEec-CCCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCcEEEEeCChHHHHHHHHCCCcEeeccccchhhhhhh-
Confidence            7765 4468899999999999999999999999999999999999887777779999999999998876431  11212 


Q ss_pred             CCCceeEEE
Q 009150          229 PCEKSSLVT  237 (542)
Q Consensus       229 ~c~ea~lm~  237 (542)
                      +...+.+|.
T Consensus       150 ~~~d~~~m~  158 (168)
T 1z4r_A          150 DYEGATLME  158 (168)
T ss_dssp             CCTTCEEEE
T ss_pred             hcCCceEEE
Confidence            244578887

>3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens}

Probab=99.44  E-value=4.8e-14  Score=124.93  Aligned_cols=92  Identities=15%  Similarity=0.238  Sum_probs=79.7

Q ss_pred             cccCCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHc
Q 009150          391 EFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFRE  469 (542)
Q Consensus       391 ~~~s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~  469 (542)
                      ...++-.+++|+|||+.+++ +.++.+.|+.+||++.... ..|||||+.... +.||-.|...|++||+++||.+|++.
T Consensus        17 ~~~p~F~g~~Ic~sGf~~~e-r~~l~~~i~~~GG~~~~~l~~~cTHLV~~~~~-~~K~~~A~~~~i~IVs~eWl~dsi~~   94 (112)
T 3l46_A           17 QGVPPFQDCILSFLGFSDEE-KTNMEEMTEMQGGKYLPLGDERCTHLVVEENI-VKDLPFEPSKKLYVVKQEWFWGSIQM   94 (112)
T ss_dssp             -CCCTTTTCEECEESCCHHH-HHHHHHHHHHTTCEECCTTCTTCSEEEECTTT-BSSCSSCCCSSCEEEEHHHHHHHHHH
T ss_pred             cCCCccCCeEEEEeCCCHHH-HHHHHHHHHHcCCEECcccCCCceEEEecCCc-hhhHHHHHHCCeeEecHHHHHHHHHc
Confidence            34566788999999998765 7899999999999999876 899999999865 45888899999999999999999999


Q ss_pred             CCCCCCCCcccCCch
Q 009150          470 GRFVDESSYMLNDDD  484 (542)
Q Consensus       470 Gk~LdEe~YeL~d~~  484 (542)
                      |..+||..|.+...+
T Consensus        95 g~~ldE~~Y~~~~~~  109 (112)
T 3l46_A           95 DARAGETMYLYEKAN  109 (112)
T ss_dssp             TSCCCGGGSBCCC--
T ss_pred             CCccChhhceeccCC
Confidence            999999999987653

>2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.40  E-value=1.1e-13  Score=121.09  Aligned_cols=90  Identities=14%  Similarity=0.259  Sum_probs=78.9

Q ss_pred             cCCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCC
Q 009150          393 QSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGR  471 (542)
Q Consensus       393 ~s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk  471 (542)
                      .+.-.+++|+|||+.+.+ +..+.+.|+.+||.+.... ..|||||+.... +.||-.|...|++||+++||.+|++.|+
T Consensus        10 ~~~F~g~~i~~sg~~~~~-r~~l~~~i~~~GG~~~~~~~~~~THLV~~~~~-~~K~~~a~~~~i~IV~~~Wl~dsi~~g~   87 (109)
T 2cou_A           10 VPPFQDCILSFLGFSDEE-KHSMEEMTEMQGGSYLPVGDERCTHLIVEENT-VKDLPFEPSKKLFVVKQEWFWGSIQMDA   87 (109)
T ss_dssp             CCTTTTCBEEEESSCHHH-HHHHHHHHHHHTCBCCCTTCTTCSEEEECTTT-CSSCSSCCCTTSEEECHHHHHHHHHTTS
T ss_pred             CCcCCCeEEEecCCCHHH-HHHHHHHHHHcCCEEecccCCCccEEEEeCCc-cHHHHHHHHCCCeEecHHHHHHHHHcCC
Confidence            345678999999988765 7899999999999999876 899999998754 5778888999999999999999999999


Q ss_pred             CCCCCCcccCCch
Q 009150          472 FVDESSYMLNDDD  484 (542)
Q Consensus       472 ~LdEe~YeL~d~~  484 (542)
                      .+||.+|.+.+..
T Consensus        88 ~ldE~~Y~~~~~~  100 (109)
T 2cou_A           88 RAGETMYLYEKAN  100 (109)
T ss_dssp             CCCGGGTBCCCCC
T ss_pred             cCChhccCCCCCC
Confidence            9999999987643

>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}

Probab=99.39  E-value=9.5e-13  Score=109.74  Aligned_cols=83  Identities=23%  Similarity=0.314  Sum_probs=70.1

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC---CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCC
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG---STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGR  471 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~---~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk  471 (542)
                      .-++.+|+++|+.... +.++.++|+.+||++....   ..+||||+.... ..|..  -+.|++||+|+||.+|+++|+
T Consensus         7 ~f~g~~~~i~g~~~~~-~~~l~~~i~~~GG~~~~~~~~~~~~THlI~~~~~-~~K~~--~~~~~~iV~~~Wi~dci~~~~   82 (92)
T 4id3_A            7 IFKNCVIYINGYTKPG-RLQLHEMIVLHGGKFLHYLSSKKTVTHIVASNLP-LKKRI--EFANYKVVSPDWIVDSVKEAR   82 (92)
T ss_dssp             TTTTCEEEECSCCSSC-HHHHHHHHHHTTCEEESSCCCTTTCCEEECSCCC-HHHHH--HTTTSCEECTHHHHHHHHHTS
T ss_pred             ccCCEEEEEeCCCCcC-HHHHHHHHHHCCCEEEEEecCCCceEEEEecCCC-HHHHH--HcCCCCEEcccHHHHHHHcCC
Confidence            4567999999976544 6789999999999999886   489999998854 45643  348999999999999999999


Q ss_pred             CCCCCCcccC
Q 009150          472 FVDESSYMLN  481 (542)
Q Consensus       472 ~LdEe~YeL~  481 (542)
                      ++||++|.|+
T Consensus        83 ~l~e~~Y~l~   92 (92)
T 4id3_A           83 LLPWQNYSLT   92 (92)
T ss_dssp             CCCGGGGBCC
T ss_pred             cCChhhcccC
Confidence            9999999874

>3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum}

Probab=99.35  E-value=1.2e-12  Score=113.11  Aligned_cols=80  Identities=9%  Similarity=0.093  Sum_probs=72.1

Q ss_pred             CCCcEEEEEEeeec-------cCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcC
Q 009150          140 DDDVVVAAITYQIV-------PADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQD  212 (542)
Q Consensus       140 ~~~~VIg~i~~~i~-------~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqG  212 (542)
                      ++|++||.+.+...       ..+...++|..++|+|+|||+|||+.|++++++++++.|+..+.+.++..|..||+|+|
T Consensus        58 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~n~~a~~~y~k~G  137 (157)
T 3mgd_A           58 ENNQIIATAAIAFIDFPPTYTNKTGRKGYITNMYTEPTSRGNGIATGMLDRLVNEAKERNIHKICLVASKLGRPVYKKYG  137 (157)
T ss_dssp             ETTEEEEEEEEEEEECCCBTTBTTCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCCEEECCCTTHHHHHHHHT
T ss_pred             ECCEEEEEEEEEeecCCCCccCcCCcEEEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcC
Confidence            36899999988764       23347899999999999999999999999999999999999999999888999999999


Q ss_pred             ccccccc
Q 009150          213 TSADTAV  219 (542)
Q Consensus       213 F~~~~~~  219 (542)
                      |+..++.
T Consensus       138 F~~~~~~  144 (157)
T 3mgd_A          138 FQDTDEW  144 (157)
T ss_dssp             CCCCTTC
T ss_pred             CeecceE
Confidence            9999876

>2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134}

Probab=99.33  E-value=2.5e-12  Score=113.45  Aligned_cols=80  Identities=13%  Similarity=0.184  Sum_probs=70.5

Q ss_pred             CCCcEEEEEEeeecc-------C-CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhc
Q 009150          140 DDDVVVAAITYQIVP-------A-DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQ  211 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-------~-d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~Kq  211 (542)
                      ++|+|||.+.+...+       + ....++|..++|+|+|||+|||++||+++++.+++.|+..+.|.++..|..||+|+
T Consensus        60 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~~~~~A~~fY~k~  139 (153)
T 2q0y_A           60 EGGAPLAGIGLMVIEWPPHPSHPLQDKRGYILNLYVDPSHRERGIGQALMNRAEAEFAERGIAFAVLHATEMGQPLYARM  139 (153)
T ss_dssp             ETTEEEEEEEEEEEECCCBTTBTTCSEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEECCCTTTHHHHHHT
T ss_pred             eCCeEEEEEEEEeeccCCCCCCCCCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCHHHHHHHHHc
Confidence            367999998876542       1 23578999999999999999999999999999999999999999988899999999


Q ss_pred             Cccccccc
Q 009150          212 DTSADTAV  219 (542)
Q Consensus       212 GF~~~~~~  219 (542)
                      ||+..+++
T Consensus       140 GF~~~~~~  147 (153)
T 2q0y_A          140 GWSPTTEM  147 (153)
T ss_dssp             TCCCCCCC
T ss_pred             CCccchhh
Confidence            99998865

>3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus}

Probab=99.31  E-value=1.2e-12  Score=113.94  Aligned_cols=78  Identities=19%  Similarity=0.250  Sum_probs=70.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      .+|++||.+.+...+ +...++|..++|+|+|||+|||+.|++++++.+++.|+..+.+. +..|..||+|+||+..+..
T Consensus        50 ~~~~ivG~~~~~~~~-~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~-n~~a~~~y~k~GF~~~~~~  127 (150)
T 3e0k_A           50 KDGLIIGCAALYPYS-EERKAEMACVAIHPDYRDGNRGLLLLNYMKHRSKSENINQIFVL-TTHSLHWFREQGFYEVGVD  127 (150)
T ss_dssp             ETTEEEEEEEEEEEG-GGTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHTTTCCEEECC-CSSCHHHHHHHTCCCCCGG
T ss_pred             ECCEEEEEEEEEEcC-CCCeEEEEEEEECHHHhccCHHHHHHHHHHHHHHHCCCcEEEEe-cHHHHHHHHHcCCeecCcc
Confidence            468999999888776 34689999999999999999999999999999999999999887 5579999999999998864

>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}

Probab=99.30  E-value=3.1e-11  Score=105.03  Aligned_cols=77  Identities=9%  Similarity=0.092  Sum_probs=69.3

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcCccccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQDTSADT  217 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqGF~~~~  217 (542)
                      +|++||.+.+....  ...++|..++|+|+|||+|||+.|+.++++++++.|+..|.+.+...   |..||+|+||+..+
T Consensus        58 ~~~~vG~~~~~~~~--~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~~GF~~~~  135 (162)
T 3lod_A           58 QGEAVGCGAIVLSE--EGFGEMKRVYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRC  135 (162)
T ss_dssp             SCCEEEEEEEEECT--TSEEEEEEEEECTTSCSSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEC
T ss_pred             CCCEEEEEEEEEcC--CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHcCCEEcc
Confidence            78999999887763  35899999999999999999999999999999999999998887553   99999999999988


Q ss_pred             cc
Q 009150          218 AV  219 (542)
Q Consensus       218 ~~  219 (542)
                      ..
T Consensus       136 ~~  137 (162)
T 3lod_A          136 AF  137 (162)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1

Probab=99.29  E-value=1.1e-11  Score=108.20  Aligned_cols=132  Identities=17%  Similarity=0.256  Sum_probs=85.8

Q ss_pred             EEeeCCCCccccchhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeecc
Q 009150           75 FVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVP  154 (542)
Q Consensus        75 ~~~~~~~~~~~~~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~  154 (542)
                      +..+.+.|+ +     .+.+..+.+...++....+...-...+++.+..-+..+..++..     +++++||.+.+...+
T Consensus        29 ir~~~~~D~-~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~~~~~vG~~~~~~~~   97 (168)
T 1bo4_A           29 TCRLGPDQV-K-----SMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAF-----DQEAVVGALAAYVLP   97 (168)
T ss_dssp             EEECCTTCH-H-----HHHHHHHHHHHHTTCHHHHHSSCCCHHHHHHHHHSSSEEEEEEE-----ETTEEEEEEEEEEEE
T ss_pred             eeeCCHhHH-H-----HHHHHHHHHHHhhcCccccccccchHHHHHHHhcCCCeEEEEEE-----ECCeEEEEEEEEecc
Confidence            556666666 2     22222233334444433332222234556655333333333222     367999998887654


Q ss_pred             ---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCccccc
Q 009150          155 ---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSADT  217 (542)
Q Consensus       155 ---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~~  217 (542)
                         .....++|..++|+|+|||+|||+.|++++++++++.|+..+.+.+..   .|..||+|+||+..+
T Consensus        98 ~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~g  166 (168)
T 1bo4_A           98 KFEQPRSEIYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLGIREEV  166 (168)
T ss_dssp             CSSSSCEEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHHTCCEEEEECCCSCCSSEEEEEEC------
T ss_pred             CccCCCceEEEEEEEECHHHhcCCHHHHHHHHHHHHHHhCCCCEEEEEecCCChHHHHHHHHcCCeecc
Confidence               234789999999999999999999999999999999999999887764   599999999998765

>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A

Probab=99.29  E-value=6.4e-12  Score=109.81  Aligned_cols=79  Identities=19%  Similarity=0.273  Sum_probs=71.6

Q ss_pred             CCCcEEEEEEeeeccC----CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~----d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~  215 (542)
                      ++|++||.+.+...+.    ....++|..++|+++|||+|||+.|++++++++++.|+..+.+.++..+..||+|+||+.
T Consensus        73 ~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~  152 (161)
T 3i3g_A           73 PTGRIVGSASLMIQPKFTRGGRAVGHIEDVVVDPSYRGAGLGKALIMDLCEISRSKGCYKVILDSSEKSLPFYEKLGFRA  152 (161)
T ss_dssp             TTTEEEEEEEEEEECCSSGGGCCEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCSEEEEEECTTTHHHHHHTTCEE
T ss_pred             cCCCeEEEEEEEeccCCCCCCccEEEEEEEEEcHHHcccCHHHHHHHHHHHHHHHcCCcEEEEEecccchhHHHhcCCee
Confidence            5789999998887542    346899999999999999999999999999999999999999999988899999999998


Q ss_pred             ccc
Q 009150          216 DTA  218 (542)
Q Consensus       216 ~~~  218 (542)
                      .+.
T Consensus       153 ~~~  155 (161)
T 3i3g_A          153 HER  155 (161)
T ss_dssp             EEE
T ss_pred             cCc
Confidence            874

>2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens}

Probab=99.29  E-value=4.3e-12  Score=107.56  Aligned_cols=81  Identities=23%  Similarity=0.371  Sum_probs=68.7

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC--CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCC
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG--STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFV  473 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~--~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~L  473 (542)
                      -++++|+++|+.... +..|+++|+.+||++..+.  ..+||||+.+.. +.|+-.+  .+++||+|+||.||+++|+++
T Consensus        13 F~g~~~~isg~~~~~-~~~L~~~i~~~GG~~~~~~~~~~~THlI~~~~~-~~k~~~~--~~~~iV~p~Wl~dci~~~~~l   88 (97)
T 2ebw_A           13 FSGVAIYVNGYTDPS-AEELRKLMMLHGGQYHVYYSRSKTTHIIATNLP-NAKIKEL--KGEKVIRPEWIVESIKAGRLL   88 (97)
T ss_dssp             TTTCEEEECSSCSSC-HHHHHHHHHHTTCEECSSCCSSSCCEEECSCCC-TTHHHHT--SSSCCBCTHHHHHHHHHTSCC
T ss_pred             CCCeEEEEeCCCccc-HHHHHHHHHHcCCEEeeecCCCCCEEEEecCCC-hHHHHHh--cCCCEeChHHHHHHHHcCCcc
Confidence            456899999987655 6789999999999988754  689999999863 5676554  399999999999999999999


Q ss_pred             CCCCccc
Q 009150          474 DESSYML  480 (542)
Q Consensus       474 dEe~YeL  480 (542)
                      |+++|.+
T Consensus        89 ~~~~Y~l   95 (97)
T 2ebw_A           89 SYIPYQL   95 (97)
T ss_dssp             CSGGGBS
T ss_pred             CchHcEe
Confidence            9999976

>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*

Probab=99.28  E-value=1.8e-11  Score=105.77  Aligned_cols=79  Identities=13%  Similarity=0.158  Sum_probs=69.2

Q ss_pred             CCcEEEEEEeeecc-------CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhh
Q 009150          141 DDVVVAAITYQIVP-------ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHK  210 (542)
Q Consensus       141 ~~~VIg~i~~~i~~-------~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K  210 (542)
                      +|++||.+.+....       .+..+++|..++|+++|||+|||+.|++++++++++.|+..+.+.+..   .|..||+|
T Consensus        63 ~g~~vG~~~~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k  142 (164)
T 4e0a_A           63 REKIGAYSVIHLVQTPLLPTMQQRKTVYISDLCVDETRRGGGIGRLIFEAIISYGKAHQVDAIELDVYDFNDRAKAFYHS  142 (164)
T ss_dssp             TTEEEEEEEEEEEEECCCSSBCCEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHH
T ss_pred             CCcEEEEEEEEecCCCCCccccCCcEEEEEEEEECHHHhcCChHHHHHHHHHHHHHHcCCCEEEEEEEcCCHHHHHHHHH
Confidence            34999999887764       234679999999999999999999999999999999999999887543   48999999


Q ss_pred             cCccccccc
Q 009150          211 QDTSADTAV  219 (542)
Q Consensus       211 qGF~~~~~~  219 (542)
                      +||+..+..
T Consensus       143 ~GF~~~~~~  151 (164)
T 4e0a_A          143 LGMRCQKQT  151 (164)
T ss_dssp             TTCEEEEEE
T ss_pred             cCCEEecee
Confidence            999999876

>3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative acetyltransferase; HET: MSE COA SO4; 1.52A {Exiguobacterium sibiricum 255-15} PDB: 3gya_A*

Probab=99.28  E-value=1.3e-11  Score=106.62  Aligned_cols=78  Identities=9%  Similarity=0.083  Sum_probs=70.2

Q ss_pred             CCCcEEEEEEeeecc-CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccccc
Q 009150          140 DDDVVVAAITYQIVP-ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTA  218 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~  218 (542)
                      ++|++||.+.+...+ .+...++|..++|+|+|||+|||+.|++++++++++ |+..+.+.+ ..|..||+|+||+..++
T Consensus        56 ~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~-~~~~i~l~~-~~a~~~y~k~GF~~~~~  133 (150)
T 3gy9_A           56 STTNQVLACGGYMKQSGQARTGRIRHVYVLPEARSHGIGTALLEKIMSEAFL-TYDRLVLYS-EQADPFYQGLGFQLVSG  133 (150)
T ss_dssp             CTTCCEEEEEEEEECTTSTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHTT-TCSEEEECC-SSCHHHHHHTTCEECCC
T ss_pred             eCCeEEEEEEEEeccCCCCCeEEEEEEEECHhhcCCCHHHHHHHHHHHHHHh-CCCEEEEec-hHHHHHHHHCCCEEeee
Confidence            468999999887764 245789999999999999999999999999999999 999999998 88999999999999865


Q ss_pred             c
Q 009150          219 V  219 (542)
Q Consensus       219 ~  219 (542)
                      .
T Consensus       134 ~  134 (150)
T 3gy9_A          134 E  134 (150)
T ss_dssp             S
T ss_pred             e
Confidence            3

>3efa_A Putative acetyltransferase; structural genom 2, protein structure initiative, midwest center for structu genomics, MCSG; 2.42A {Lactobacillus plantarum WCFS1}

Probab=99.28  E-value=1e-11  Score=108.07  Aligned_cols=78  Identities=12%  Similarity=0.157  Sum_probs=71.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      ++|++||.+.+....  ...++|..++|+|+|||+|||+.|++++.+++++.|+..+.+.++..+..||+|+||+..++.
T Consensus        54 ~~~~ivG~~~~~~~~--~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~a~~~y~~~Gf~~~~~~  131 (147)
T 3efa_A           54 QPDLPITTLRLEPQA--DHVMRFGRVCTRKAYRGHGWGRQLLTAAEEWATQRGFTHGEIHGELTAQRFYELCGYRVTAGP  131 (147)
T ss_dssp             ETTEEEEEEEEEECS--TTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHTTCEEEECC
T ss_pred             CCCeEEEEEEEEeCC--CCeEEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeccHHHHHHHHHcCCcccCCc
Confidence            478999999877653  358999999999999999999999999999999999999999998889999999999998864

>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A

Probab=99.28  E-value=1.6e-11  Score=108.85  Aligned_cols=80  Identities=11%  Similarity=0.041  Sum_probs=70.1

Q ss_pred             CCCcEEEEEEeeecc------CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhh
Q 009150          140 DDDVVVAAITYQIVP------ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHK  210 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~------~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K  210 (542)
                      ++|++||.+.+...+      .....++|..++|+++|||+|||+.|+.++++++++.|+..+.+.+...   |..||+|
T Consensus        70 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k  149 (166)
T 4evy_A           70 SDHQAIAMLEASIRFEYVNGTETSPVGFLEGIYVLPAHRRSGVATMLIRQAEVWAKQFSCTEFASDAALDNVISHAMHRS  149 (166)
T ss_dssp             ETTEEEEEEEEEEECSCCTTCSSSSEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHH
T ss_pred             ECCeEEEEEEEEeecccccCCCCCCeEEEEEEEEChhhhcCCHHHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHH
Confidence            358999999886543      1257899999999999999999999999999999999999999888765   9999999


Q ss_pred             cCccccccc
Q 009150          211 QDTSADTAV  219 (542)
Q Consensus       211 qGF~~~~~~  219 (542)
                      +||+..+..
T Consensus       150 ~GF~~~~~~  158 (166)
T 4evy_A          150 LGFQETEKV  158 (166)
T ss_dssp             TTCEEEEEE
T ss_pred             cCCEecceE
Confidence            999988754

>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}

Probab=99.27  E-value=2e-11  Score=106.59  Aligned_cols=83  Identities=23%  Similarity=0.330  Sum_probs=55.8

Q ss_pred             CCCcEEEEEEeeecc------CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEc---cccchhhhhh
Q 009150          140 DDDVVVAAITYQIVP------ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWG---DKESEGFWHK  210 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~------~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a---~~~A~~Fw~K  210 (542)
                      ++|++||.+.+....      .....++|..++|+|+|||+|||+.|++++++++++.|+..+.+.+   +..|..||+|
T Consensus        63 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k  142 (166)
T 3jvn_A           63 MDDVIIGFITGHFCELISTVSKLVMMATIDELYIEKEYRREGVAEQLMMRIEQELKDYGVKEIFVEVWDFNKGALEFYNK  142 (166)
T ss_dssp             SSSSEEEEEEEEEEEECCSSSCCEEEEEEEEEEECTTTCSSSHHHHHHHHHHHHHHTTTCSEEEECCC--CCBC------
T ss_pred             ECCEEEEEEEEEeeccccccccCccEEEEEEEEECHHHhccCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHH
Confidence            478999999876532      2236789999999999999999999999999999999999999887   4469999999


Q ss_pred             cCcccccccccc
Q 009150          211 QDTSADTAVSLK  222 (542)
Q Consensus       211 qGF~~~~~~~~~  222 (542)
                      +||+..++..+.
T Consensus       143 ~GF~~~~~~~~~  154 (166)
T 3jvn_A          143 QGLNEHIHYLRK  154 (166)
T ss_dssp             ------------
T ss_pred             cCCeEHHHHHhC
Confidence            999999876444

>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1

Probab=99.26  E-value=1.4e-11  Score=106.55  Aligned_cols=79  Identities=13%  Similarity=0.205  Sum_probs=71.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++|++||.+.+...+.....++|..++|+|+|||+|||+.|+.++++++++.|+..+.+.+..   .|..||+|+||+..
T Consensus        49 ~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~  128 (157)
T 1mk4_A           49 EHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIE  128 (157)
T ss_dssp             SSSSEEEEEEEEECSSSTTEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEEC
T ss_pred             ECCeEEEEEEEecCCCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHcCCEEc
Confidence            468999999887766556789999999999999999999999999999999999999887766   49999999999999


Q ss_pred             cc
Q 009150          217 TA  218 (542)
Q Consensus       217 ~~  218 (542)
                      +.
T Consensus       129 ~~  130 (157)
T 1mk4_A          129 KG  130 (157)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus}

Probab=99.26  E-value=1.1e-11  Score=106.23  Aligned_cols=80  Identities=10%  Similarity=0.198  Sum_probs=62.3

Q ss_pred             CCCcEEEEEEeeecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc--c---cchhhhhhc
Q 009150          140 DDDVVVAAITYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD--K---ESEGFWHKQ  211 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~--~---~A~~Fw~Kq  211 (542)
                      ++|++||.+.+...+   .+...++|..++|+|+|||+|||+.|++++.+++++.|+..+.+.+.  .   .|..||+|+
T Consensus        58 ~~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~  137 (150)
T 3t9y_A           58 KENKIIGLSGMCKMMFYEKNAEYMRILAFVIHSEFRKKGYGKRLLADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDN  137 (150)
T ss_dssp             ETTEEEEEEEEEEEECSSSSCEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSCEEECCCCCC------------
T ss_pred             ECCEEEEEEEEEEeccccccCCEEEEEEEEECHHHhccCHHHHHHHHHHHHHHHcCCEEEEEEcCCCccchhHHHHHHHc
Confidence            368999999887765   34478999999999999999999999999999999999999999887  2   499999999


Q ss_pred             Cccccccc
Q 009150          212 DTSADTAV  219 (542)
Q Consensus       212 GF~~~~~~  219 (542)
                      ||+..+..
T Consensus       138 GF~~~~~~  145 (150)
T 3t9y_A          138 GYVSNTSG  145 (150)
T ss_dssp             CCCCCCCC
T ss_pred             CCEEecce
Confidence            99988653

>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1

Probab=99.26  E-value=1.3e-11  Score=112.19  Aligned_cols=81  Identities=16%  Similarity=0.143  Sum_probs=69.4

Q ss_pred             CCCcEEEEEEeeeccC-----CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhc
Q 009150          140 DDDVVVAAITYQIVPA-----DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQ  211 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~-----d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~Kq  211 (542)
                      ++++|||.+.+.....     ....++|..++|+|+|||+|||+.|++.+++.+++.|+..|.|.+..   .|..||+|+
T Consensus        66 ~~~~ivG~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~  145 (180)
T 1tiq_A           66 FDHEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKM  145 (180)
T ss_dssp             ETTEEEEEEEEEEGGGSSSCCCTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT
T ss_pred             ECCEEEEEEEEEeCCCcccccCCCcEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEehhcCHHHHHHHHHc
Confidence            3679999887775541     23589999999999999999999999999999999999999887733   599999999


Q ss_pred             Ccccccccc
Q 009150          212 DTSADTAVS  220 (542)
Q Consensus       212 GF~~~~~~~  220 (542)
                      ||+..+...
T Consensus       146 GF~~~g~~~  154 (180)
T 1tiq_A          146 GFVQTGAHS  154 (180)
T ss_dssp             TCEEEEEEE
T ss_pred             CCEEcCcEE
Confidence            999988754

>1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5

Probab=99.26  E-value=1.7e-11  Score=110.41  Aligned_cols=87  Identities=23%  Similarity=0.374  Sum_probs=71.7

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHH-HHHhcCCeEeCHHHHHHHHHcCCCC
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFL-TALCSGAWIVSPNWLKESFREGRFV  473 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL-~AIA~G~wIVSpsWL~dSlk~Gk~L  473 (542)
                      -++++|+|+|+.... +..+..+|+.+||.+.+.. +.+||||++....+++-. .+...+++||+|+||.+|+++|+++
T Consensus        41 F~g~~i~i~G~~~~~-~~~L~~~i~~~Gg~v~~~l~~~vTHvI~~~~~~~~~~~~~~~~~~~~iV~~~Wv~dsi~~~~ll  119 (132)
T 1wf6_A           41 LDGCRIYLCGFSGRK-LDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPHVVGAKWLLECFSKGYML  119 (132)
T ss_dssp             TTTCEEEEESCCSHH-HHHHHHHHHHTTCEEESSCCSSCCEEEESSCCSHHHHHHHHSCCCCCEEEHHHHHHHHHHSSCC
T ss_pred             cCCEEEEEECCChHH-HHHHHHHHHHCCCEEeCcCCCCCeEEEECCchHHHHHHHHhhCCCCeEechHHHHHHHHcCCcC
Confidence            457899999997655 6789999999999999887 799999998754444433 2223579999999999999999999


Q ss_pred             CCCCcccCCc
Q 009150          474 DESSYMLNDD  483 (542)
Q Consensus       474 dEe~YeL~d~  483 (542)
                      ||++|.+.+.
T Consensus       120 ~e~~Y~~~~~  129 (132)
T 1wf6_A          120 SEEPYIHSGP  129 (132)
T ss_dssp             CSGGGBCCCS
T ss_pred             CHhhccCCCC
Confidence            9999987653

>1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic resistance, coenzyme A; HET: COA; 1.80A {Enterococcus faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A*

Probab=99.26  E-value=6.2e-11  Score=107.43  Aligned_cols=93  Identities=19%  Similarity=0.085  Sum_probs=75.9

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-----------------
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-----------------  202 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-----------------  202 (542)
                      ++|++||.+.+...+ +...++|..++|+|+|||+|||+.|++++++++++.|+..+.+.+..                 
T Consensus        52 ~~~~~vG~~~~~~~~-~~~~~~i~~l~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~i~l~~~~~n~~s~~~~~~~~~~~~  130 (180)
T 1n71_A           52 DQDELVGFIGAIPQY-GITGWELHPLVVESSRRKNQIGTRLVNYLEKEVASRGGITIYLGTDDLDHGTTLSQTDLYEHTF  130 (180)
T ss_dssp             ETTEEEEEEEEEEEE-TTTEEEEEEEEECTTSCSSSHHHHHHHHHHHHHHHTTCCEEEEEEECSSSCBTTSSSCTTSSHH
T ss_pred             cCCeEEEEEEEeccC-CCceEEEEEEEEccccccCCHHHHHHHHHHHHHHHCCCcEEEEEecCCcccccccccccccccc
Confidence            468999999887654 34689999999999999999999999999999999999999988743                 


Q ss_pred             -----------cchhhhhhcCccccccccccccCCCCCCCceeEEE
Q 009150          203 -----------ESEGFWHKQDTSADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       203 -----------~A~~Fw~KqGF~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                                 .|..||+|+||+..+.......++..    ..+|.
T Consensus       131 ~~~~~v~n~~~~a~~~y~k~GF~~~~~~~~~~~~~~~----~~~m~  172 (180)
T 1n71_A          131 DKVASIQNLREHPYEFYEKLGYKIVGVLPNANGWDKP----DIWMA  172 (180)
T ss_dssp             HHHHTCCBSSCCTHHHHHHTTCEEEEEETTTTSTTCC----EEEEE
T ss_pred             hhhhhhcccchHHHHHHHHcCcEEEeeecccCCCCCC----cEEEE
Confidence                       36899999999999876543222332    56666

>2jdc_A Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1.6A {Bacillus licheniformis} SCOP: d.108.1.1 PDB: 2bsw_A* 2jdd_A*

Probab=99.25  E-value=2e-11  Score=106.25  Aligned_cols=80  Identities=14%  Similarity=0.232  Sum_probs=72.2

Q ss_pred             CCCcEEEEEEeeeccC----CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~----d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~  215 (542)
                      ++|++||.+.+...+.    ....++|..++|+|+|||+|||+.|++++.+.+++.|+..+.+.++..|..||+|+||+.
T Consensus        46 ~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~a~~~y~~~GF~~  125 (146)
T 2jdc_A           46 YGGKLISIASFHQAEHSELQGQKQYQLRGMATLEGYREQKAGSSLIKHAEEILRKRGADLLWCNARTSASGYYKKLGFSE  125 (146)
T ss_dssp             ETTEEEEEEEEEECCCTTSCCSSEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHTTCEE
T ss_pred             cCCEEEEEEEEecccccccCCCceEEEEEEEECHHHcccCHHHHHHHHHHHHHHHcCCcEEEEEccccHHHHHHHcCCEE
Confidence            3679999998887653    335899999999999999999999999999999999999999999888999999999998


Q ss_pred             cccc
Q 009150          216 DTAV  219 (542)
Q Consensus       216 ~~~~  219 (542)
                      .+..
T Consensus       126 ~~~~  129 (146)
T 2jdc_A          126 QGEV  129 (146)
T ss_dssp             EEEE
T ss_pred             eccc
Confidence            8765

>1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1

Probab=99.24  E-value=1.3e-10  Score=100.36  Aligned_cols=78  Identities=17%  Similarity=0.203  Sum_probs=70.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEc-cccchhhhhhcCcccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWG-DKESEGFWHKQDTSADTA  218 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a-~~~A~~Fw~KqGF~~~~~  218 (542)
                      ++|++||.+.+...+   +.++|..++|+|+|||+|||+.|++++++++++.|+..+.+.+ +..|..||+|+||+..+.
T Consensus        47 ~~~~~vG~~~~~~~~---~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~n~~a~~~y~~~Gf~~~~~  123 (140)
T 1y9w_A           47 EEGKIFGGVTGTMYF---YHLHIDFLWVDESVRHDGYGSQLLHEIEGIAKEKGCRLILLDSFSFQAPEFYKKHGYREYGV  123 (140)
T ss_dssp             TTCCEEEEEEEEEET---TEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEE
T ss_pred             CCCeEEEEEEEEEec---CEEEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEcCCHhHHHHHHHCCCEEEEE
Confidence            578999999887765   4789999999999999999999999999999999999999888 446999999999999887


Q ss_pred             cc
Q 009150          219 VS  220 (542)
Q Consensus       219 ~~  220 (542)
                      ..
T Consensus       124 ~~  125 (140)
T 1y9w_A          124 VE  125 (140)
T ss_dssp             ES
T ss_pred             Ec
Confidence            64

>1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1

Probab=99.24  E-value=2.3e-11  Score=106.96  Aligned_cols=78  Identities=12%  Similarity=0.099  Sum_probs=69.4

Q ss_pred             CcEEEEEEeeeccC---CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc--cchhhhhhcCcccc
Q 009150          142 DVVVAAITYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK--ESEGFWHKQDTSAD  216 (542)
Q Consensus       142 ~~VIg~i~~~i~~~---d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~--~A~~Fw~KqGF~~~  216 (542)
                      |++||.+.+...+.   +...++|..++|+|+|||+|||+.|++++++++++.|+..+.+.+..  .|..||+|+||+..
T Consensus        71 ~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~a~~~y~k~GF~~~  150 (158)
T 1vkc_A           71 SELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDNPAVKWYEERGYKAR  150 (158)
T ss_dssp             CCEEEEEEEEEEECTTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTCTHHHHHHHTTCCCC
T ss_pred             CcEEEEEEEEEeccccCCCCEEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCcEEEEEEeCCCcHHHHHHHCCCEee
Confidence            89999998887653   55789999999999999999999999999999999999999887543  68999999999988


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       151 ~~~  153 (158)
T 1vkc_A          151 ALI  153 (158)
T ss_dssp             CCC
T ss_pred             EEE
Confidence            754

>3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana}

Probab=99.22  E-value=2.2e-11  Score=104.24  Aligned_cols=79  Identities=16%  Similarity=0.132  Sum_probs=70.8

Q ss_pred             CCcEEEEEEeeeccC----CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccc
Q 009150          141 DDVVVAAITYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSAD  216 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~----d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~  216 (542)
                      +|++||.+.+...+.    ....++|..++|+|+|||+|||+.|++++++.+++.|+..+.+.+......||+|+||+..
T Consensus        61 ~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~~y~k~GF~~~  140 (149)
T 3t90_A           61 SGKIAATGSVMIEKKFLRNCGKAGHIEDVVVDSRFRGKQLGKKVVEFLMDHCKSMGCYKVILDCSVENKVFYEKCGMSNK  140 (149)
T ss_dssp             TTEEEEEEEEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEECCCCGGGHHHHHTTTCCCC
T ss_pred             CCcEEEEEEEEeccccCCCCCCceEEEEEEECHHHhCCcHHHHHHHHHHHHHHHCCCeEEEEeccccHHHHHHHCCCeec
Confidence            689999998887542    3468899999999999999999999999999999999999999888888899999999988


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       141 ~~~  143 (149)
T 3t90_A          141 SIQ  143 (149)
T ss_dssp             CCC
T ss_pred             cce
Confidence            753

>2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1

Probab=99.22  E-value=3.3e-11  Score=105.11  Aligned_cols=77  Identities=12%  Similarity=0.118  Sum_probs=69.3

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCcccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADTA  218 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~~  218 (542)
                      ++|++||.+.+...   ...++|..++|+|+|||+|||+.|++++++++++.|+..+.+.+.+ .|..||+|+||+..+.
T Consensus        59 ~~~~~vG~~~~~~~---~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~n~~a~~~y~k~GF~~~~~  135 (152)
T 2g3a_A           59 DDNSVTGGLVGHTA---RGWLYVQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFTKIGS  135 (152)
T ss_dssp             TTCCEEEEEEEEEE---TTEEEEEEEECCGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred             CCCeEEEEEEEEEe---CCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCccHHHHHHHCCCEEeee
Confidence            47899999887763   2489999999999999999999999999999999999999999864 5999999999999887


Q ss_pred             c
Q 009150          219 V  219 (542)
Q Consensus       219 ~  219 (542)
                      .
T Consensus       136 ~  136 (152)
T 2g3a_A          136 L  136 (152)
T ss_dssp             E
T ss_pred             c
Confidence            5

>1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A*

Probab=99.22  E-value=3.9e-11  Score=104.97  Aligned_cols=98  Identities=16%  Similarity=0.129  Sum_probs=77.5

Q ss_pred             CCCcEEEEEEeeecc--CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc--ccchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVP--ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD--KESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~--~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~--~~A~~Fw~KqGF~~  215 (542)
                      ++|++||.+.+...+  .....++|..++|+|+|||+|||+.|++++++++++.|+..+.+.+.  +.|..||+|+||+.
T Consensus        69 ~~~~~vG~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~a~~~y~k~Gf~~  148 (177)
T 1ghe_A           69 EDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSALAYTR  148 (177)
T ss_dssp             ETTEEEEEEEEEECCSTTCTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTSHHHHHHHHTTCEE
T ss_pred             cCCEEEEEEEEEeccCCCCcceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccCCHHHHHHHHcCCEE
Confidence            367999999888765  23368999999999999999999999999999999999999988774  35999999999999


Q ss_pred             cccccccccCCCCCCCceeEEE
Q 009150          216 DTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       216 ~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      .+.......-++|......+|.
T Consensus       149 ~~~~~~~~~~~~g~~~~~~~m~  170 (177)
T 1ghe_A          149 VGELPGYCATPDGRLHPTAIYF  170 (177)
T ss_dssp             EEEEEEEEECTTSCEEEEEEEE
T ss_pred             cccccceeecCCCcccceEEEE
Confidence            8876443221343222345555

>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*

Probab=99.22  E-value=6.7e-11  Score=118.04  Aligned_cols=142  Identities=18%  Similarity=0.265  Sum_probs=97.5

Q ss_pred             CCeEEEE-cccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcC-CeEeCHHHHHHHHHcCCCC
Q 009150          397 KCFRIML-MNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSG-AWIVSPNWLKESFREGRFV  473 (542)
Q Consensus       397 k~~rVlf-SG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G-~wIVSpsWL~dSlk~Gk~L  473 (542)
                      .+..|++ +|..... ++.|.++|..+||++..+. +.+||||+++  +|.|+-.++.+| .+||+|+||.+|+++|+++
T Consensus        12 ~G~~f~V~sg~~~~~-k~~L~~lI~~~GG~v~~n~~~~t~~iIa~~--~~~k~~~~~~~g~~~IV~p~Wv~Dci~~~~ll   88 (263)
T 3ii6_X           12 EDVEFCVMSGTDSQP-KPDLENRIAEFGGYIVQNPGPDTYCVIAGS--ENIRVKNIILSNKHDVVKPAWLLECFKTKSFV   88 (263)
T ss_dssp             TTCEEEECCCC--CC-HHHHHHHHHHTTCEECSSCCTTEEEEECSS--CCHHHHHHHHSCSCCEECHHHHHHHHHHTSCC
T ss_pred             CCeEEEEEcCCCCCC-HHHHHHHHHHcCCEEEecCCCCEEEEEeCC--CCHHHHHHHhcCCCCEeehHHHHHHHhcCCcC
Confidence            4578876 5654443 7789999999999999776 6677788875  569999999998 9999999999999999999


Q ss_pred             CCCCccc-CCchh--------hhhcC------CC---hHHH---------------------HHH-h--hcCCCCCCCCe
Q 009150          474 DESSYML-NDDDY--------VLKYR------SE---LKDS---------------------VLR-A--KARPGGLLRGY  511 (542)
Q Consensus       474 dEe~YeL-~d~~~--------e~~~g------~~---L~~s---------------------l~r-A--r~~~~~LF~G~  511 (542)
                      |.++|.+ ...+.        ...||      .+   |+..                     +.+ .  ...+..||+|+
T Consensus        89 p~~p~~~~~~~~~~~~~~~~~~D~~GDsy~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lF~~~  168 (263)
T 3ii6_X           89 PWQPRFMIHMCPSTKEHFAREYDCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRH  168 (263)
T ss_dssp             CCCGGGEEECCHHHHHHTTTTBCTTSCBSSSCCCHHHHHHHHHSCCCCCSCCHHHHHHHHHHHHHHHTCTTCGGGTTTTC
T ss_pred             CCCHHHHhhCCHHHHHHHHHhccccCCccCCcCCHHHHHHHHHhCcccccCCchhhHHHHHHHHHhhcccCCcchhhCCe
Confidence            9888742 22110        00111      00   0110                     000 0  01245699999


Q ss_pred             EEEEeCC---------CCC-CHHHHHHHHHhCCCEEeccC
Q 009150          512 NIIMAAH---------IQP-PIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       512 ~f~Is~~---------v~p-~~~~L~~LIeagGG~V~~~L  541 (542)
                      +||+...         +.. ..+.++.+|..+||++...|
T Consensus       169 ~vy~~~~~~~~~~~~~i~~~~l~~~~~~i~~~GG~v~~~l  208 (263)
T 3ii6_X          169 TVYLDSYAVINDLSTKNEGTRLAIKALELRFHGAKVVSCL  208 (263)
T ss_dssp             EEEECCBSSTTCGGGBCCSSHHHHHHHHHHHTTCEEESSC
T ss_pred             EEEEecccccCCcccccchhHHHHHHHHHHccCCEEecCC
Confidence            9999532         111 23456899999999998765

>1xeb_A Hypothetical protein PA0115; midwest center for structural genomics, MCSG, structural GEN protein structure initiative, PSI, APC22065; 2.35A {Pseudomonas aeruginosa} SCOP: d.108.1.1

Probab=99.22  E-value=2.1e-11  Score=106.36  Aligned_cols=80  Identities=13%  Similarity=0.085  Sum_probs=71.6

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccccchhhhhhcCcccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDKESEGFWHKQDTSADTA  218 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~~A~~Fw~KqGF~~~~~  218 (542)
                      +++++||.+.+.........++|..++|+|+|||+|||+.|++++++.+++. |+..+.+.++..|..||+|+||+..++
T Consensus        56 ~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~n~~a~~~y~~~Gf~~~~~  135 (150)
T 1xeb_A           56 RDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARGQGLGHQLMERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTE  135 (150)
T ss_dssp             ETTEEEEEEEEECSTTTTTCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHHTTCCEEEEEESTTHHHHHTTTEEECSC
T ss_pred             ECCEEEEEEEEEccCCCCCeEEEEEEEECHHHccCCHHHHHHHHHHHHHHHhcCCCEEEEechhHHHHHHHHcCCEECCc
Confidence            3679999998876654446899999999999999999999999999999998 999999999888999999999998874


Q ss_pred             c
Q 009150          219 V  219 (542)
Q Consensus       219 ~  219 (542)
                      .
T Consensus       136 ~  136 (150)
T 1xeb_A          136 V  136 (150)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*

Probab=99.21  E-value=9.2e-11  Score=103.09  Aligned_cols=80  Identities=14%  Similarity=0.104  Sum_probs=69.7

Q ss_pred             CCCcEEEEEEeeecc------CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhh
Q 009150          140 DDDVVVAAITYQIVP------ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHK  210 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~------~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K  210 (542)
                      ++|++||.+.+....      .....++|..++|+++|||+|||+.|+.++++++++.|+..+.+.+..   .|..||+|
T Consensus        70 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k  149 (165)
T 1s3z_A           70 ADGVAIGFADASIRHDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQA  149 (165)
T ss_dssp             ETTEEEEEEEEEEECSCCTTCSSSSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHH
T ss_pred             ECCEEEEEEEEEecccccccccCCCcEEEEEEEEChhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecCcCCHHHHHHHHH
Confidence            368999999888721      234789999999999999999999999999999999999999888765   38999999


Q ss_pred             cCccccccc
Q 009150          211 QDTSADTAV  219 (542)
Q Consensus       211 qGF~~~~~~  219 (542)
                      +||+..+..
T Consensus       150 ~GF~~~~~~  158 (165)
T 1s3z_A          150 LGFEETERV  158 (165)
T ss_dssp             TTCEEEEEE
T ss_pred             cCCeEeeeE
Confidence            999988754

>3owc_A Probable acetyltransferase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa}

Probab=99.21  E-value=3.8e-11  Score=106.69  Aligned_cols=95  Identities=8%  Similarity=0.012  Sum_probs=77.3

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++++||.+.+...+ +...++|..++|+|+|||+|||+.|++.+++++++ .|+..+.+.+..   .|..||+|+||+..
T Consensus        76 ~~~~vG~~~~~~~~-~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~~  154 (188)
T 3owc_A           76 DDQVIGHCQLLFDR-RNGVVRLARIVLAPSARGQGLGLPMLEALLAEAFADADIERVELNVYDWNAAARHLYRRAGFREE  154 (188)
T ss_dssp             TTEEEEEEEEEEET-TTTEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHHSTTCCEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             CCcEEEEEEEEecC-CCCEEEEEEEEEcHHHhCCChhHHHHHHHHHHHHHhhCceEEEEEEecCCHHHHHHHHHcCCEEe
Confidence            78999999888664 44689999999999999999999999999999999 599999888754   48999999999999


Q ss_pred             ccccccccCCCCCCCceeEEE
Q 009150          217 TAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       217 ~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +.......+.+. .....+|.
T Consensus       155 ~~~~~~~~~~g~-~~d~~~~~  174 (188)
T 3owc_A          155 GLRRSATRVGRE-RWNVVLMG  174 (188)
T ss_dssp             EEEEEEEEETTE-EEEEEEEE
T ss_pred             eeEeeEEEECCE-EeehhhHH
Confidence            887544333332 33355555

>2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus}

Probab=99.20  E-value=5.2e-11  Score=106.78  Aligned_cols=94  Identities=18%  Similarity=0.135  Sum_probs=75.7

Q ss_pred             CCCcEEEEEEeeeccC---------CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccc---cchh
Q 009150          140 DDDVVVAAITYQIVPA---------DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDK---ESEG  206 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~---------d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~  206 (542)
                      +++++||.+.+...+.         ....++|..++|+|+|||+|||+.|++++++++++. |+..|.+.+..   .|..
T Consensus        59 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~A~~  138 (168)
T 2x7b_A           59 VDNSVVGYIMPRIEWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIA  138 (168)
T ss_dssp             ETTEEEEEEEEEEEEEECSSCSSCCEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCHHHHH
T ss_pred             ECCeEEEEEEEEEeccccccccccCCCcEEEEEEEEECHHHhccCHHHHHHHHHHHHHHHhcCeeEEEEEEEeCCHHHHH
Confidence            3679999998876442         224789999999999999999999999999999999 99999887653   4999


Q ss_pred             hhhhcCccccccccccccCCCCCCCceeEEE
Q 009150          207 FWHKQDTSADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       207 Fw~KqGF~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      ||+|+||+..+....  .|.+|  ..+.+|.
T Consensus       139 ~Yek~GF~~~~~~~~--~~~~g--~~~~~m~  165 (168)
T 2x7b_A          139 LYEKLNFKKVKVLKG--YYADG--EDAYLMA  165 (168)
T ss_dssp             HHHHTTCEEEEEETT--CSTTS--CCEEEEE
T ss_pred             HHHHCCCEEEEEeec--ccCCC--CcEEEEE
Confidence            999999999887642  34443  2366665

>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A*

Probab=99.20  E-value=3.5e-11  Score=105.00  Aligned_cols=79  Identities=18%  Similarity=0.132  Sum_probs=69.7

Q ss_pred             CCCcEEEEEEeeeccC----CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~----d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~  215 (542)
                      ++|++||.+.+.+.+.    ....++|..++|+|+|||+|||+.|++++++.+++.|+..+.+.+...+..||+|+||+.
T Consensus        77 ~~~~ivG~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~Y~k~GF~~  156 (165)
T 4ag7_A           77 NSQKVVASASLVVEMKFIHGAGSRGRVEDVVVDTEMRRQKLGAVLLKTLVSLGKSLGVYKISLECVPELLPFYSQFGFQD  156 (165)
T ss_dssp             TTTEEEEEEEEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCSEEEECSCGGGHHHHHTTTCEE
T ss_pred             CCCeEEEEEEEEecccccCCCCcEEEEEEEEECHHhcCCCHHHHHHHHHHHHHHHcCCeEEEEEeCHHHHHHHHHCCCCc
Confidence            3789999998876332    335889999999999999999999999999999999999999998888899999999987


Q ss_pred             ccc
Q 009150          216 DTA  218 (542)
Q Consensus       216 ~~~  218 (542)
                      .+.
T Consensus       157 ~~~  159 (165)
T 4ag7_A          157 DCN  159 (165)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            654

>1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1

Probab=99.20  E-value=6.4e-11  Score=104.06  Aligned_cols=96  Identities=13%  Similarity=0.077  Sum_probs=77.5

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqGF~~~  216 (542)
                      ++|++||.+.+...  +...++|..++|+|+|||+|||+.|++++.+++++.|+..+.+.+...   |..||+|+||+..
T Consensus        44 ~~~~~vG~~~~~~~--~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~  121 (157)
T 1y9k_A           44 QGGSVIGVYVLLET--RPKTMEIMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIF  121 (157)
T ss_dssp             CSSSEEEEEEEEEC--STTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             ECCEEEEEEEEEcC--CCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCCCCHHHHHHHHHCCCEEe
Confidence            46799999877644  345899999999999999999999999999999999999998887764   8999999999999


Q ss_pred             ccccc-------cccCCCC-CCCceeEEE
Q 009150          217 TAVSL-------KFCFPVK-PCEKSSLVT  237 (542)
Q Consensus       217 ~~~~~-------~~~~~~~-~c~ea~lm~  237 (542)
                      +....       .+.+.+| ++....+|.
T Consensus       122 ~~~~~~~~~~~~~~~~~~g~~~~d~~~m~  150 (157)
T 1y9k_A          122 SIDFDYFSKHYEEEIIENGIVCRDMIRLA  150 (157)
T ss_dssp             EEETTHHHHHCSSCEEETTEEECSEEEEE
T ss_pred             ccccccccCCCchHHHHcCCchHHHhhHH
Confidence            87622       2222344 455566666

>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*

Probab=99.19  E-value=4.9e-11  Score=121.24  Aligned_cols=90  Identities=16%  Similarity=0.176  Sum_probs=79.9

Q ss_pred             cCCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC--CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150          393 QSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG--STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREG  470 (542)
Q Consensus       393 ~s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~--~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~G  470 (542)
                      .+.-.+..|++||+.+.+ |..+.++|+.+||+++.+.  ..|||||++... +.|+..|...|++||+++||.+|++.|
T Consensus       197 ~~~f~g~~i~~tG~~~~~-r~~l~~li~~~GG~~~~~ls~~~~THLI~~~~~-g~K~~~A~~~gi~IV~~~Wl~dsi~~g  274 (298)
T 3olc_X          197 CPIFLGCIICVTGLCGLD-RKEVQQLTVKHGGQYMGQLKMNECTHLIVQEPK-GQKYECAKRWNVHCVTTQWFFDSIEKG  274 (298)
T ss_dssp             CCTTTTCEEEECSCCHHH-HHHHHHHHHHTTCEECSSCCTTTCCEEECSSSC-SHHHHHHHHTTCEEECHHHHHHHHHHT
T ss_pred             ccccCCeEEEEeCCCCcc-HHHHHHHHHHcCCEEeceecCCCceEEEEeCCC-chHHHHHHHCCCeEEeHHHHHHHHHCC
Confidence            445678999999988764 7899999999999999887  479999999874 799999999999999999999999999


Q ss_pred             CCCCCCCcccCCch
Q 009150          471 RFVDESSYMLNDDD  484 (542)
Q Consensus       471 k~LdEe~YeL~d~~  484 (542)
                      +++||++|.+....
T Consensus       275 ~~lde~~Y~l~~~~  288 (298)
T 3olc_X          275 FCQDESIYKTEPRP  288 (298)
T ss_dssp             SCCCGGGSBSCC--
T ss_pred             CCCCchhcCCCCCc
Confidence            99999999998764

>2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A*

Probab=99.19  E-value=6.5e-11  Score=104.31  Aligned_cols=95  Identities=9%  Similarity=0.114  Sum_probs=77.5

Q ss_pred             CCcEEEEEEeeecc-CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccc---cchhhhhhcCccc
Q 009150          141 DDVVVAAITYQIVP-ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       141 ~~~VIg~i~~~i~~-~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      ++++||.+.+...+ .....++|..++|+|+|||+|||+.|+.++++++++. |+..+.+.+..   .|..||+|+||+.
T Consensus        53 ~~~~vG~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~  132 (170)
T 2ob0_A           53 NDIAVGAVCCRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEI  132 (170)
T ss_dssp             TTEEEEEEEEEEEEETTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHCCCSEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred             CCeEEEEEEEEEEecCCCcEEEEEEEEECHHHcCcCHHHHHHHHHHHHHHhcCCccEEEEEEecCCHHHHHHHHHcCCEE
Confidence            67999999887665 3335899999999999999999999999999999998 99999888766   5999999999999


Q ss_pred             cccccccccCCCCCCCceeEEE
Q 009150          216 DTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       216 ~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      .+.....  |.+|.-....+|.
T Consensus       133 ~~~~~~~--~~~g~~~~~~~m~  152 (170)
T 2ob0_A          133 IETKKNY--YKRIEPADAHVLQ  152 (170)
T ss_dssp             EEEETTC--CSSSSSCCEEEEE
T ss_pred             eEeeecc--ccCCCCCccEEEE
Confidence            8876432  4433233466666

>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}

Probab=99.19  E-value=4.2e-11  Score=105.42  Aligned_cols=75  Identities=16%  Similarity=0.192  Sum_probs=65.9

Q ss_pred             CCCcEEEEEEeeeccC----CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcC
Q 009150          140 DDDVVVAAITYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQD  212 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~----d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqG  212 (542)
                      ++|++||.+.+...+.    ...+++|..++|+|+|||+|||+.|++++++++++.|+..|.|.+..   .|..||+|+|
T Consensus        58 ~~~~~vG~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~G  137 (150)
T 2dxq_A           58 ENGKPVATATLLIVPNLTRAARPYAFIENVVTLEARRGRGYGRTVVRHAIETAFGANCYKVMLLTGRHDPAVHAFYESCG  137 (150)
T ss_dssp             ETTEEEEEEEEEEECCSHHHHCCEEEEEEEECCGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECCCCHHHHHHHHHTT
T ss_pred             cCCEEEEEEEEEEecccccCCCceEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEeCCCChHHHHHHHHcC
Confidence            3679999998876552    12479999999999999999999999999999999999999988755   3899999999


Q ss_pred             cc
Q 009150          213 TS  214 (542)
Q Consensus       213 F~  214 (542)
                      |+
T Consensus       138 F~  139 (150)
T 2dxq_A          138 FV  139 (150)
T ss_dssp             CE
T ss_pred             Cc
Confidence            98

>1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A

Probab=99.19  E-value=5.3e-11  Score=102.78  Aligned_cols=79  Identities=14%  Similarity=0.173  Sum_probs=70.4

Q ss_pred             CCCcEEEEEEeeecc-------------CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccccch
Q 009150          140 DDDVVVAAITYQIVP-------------ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDKESE  205 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-------------~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~~A~  205 (542)
                      +++++||.+.+....             ++...++|..++|+|+|||+|||+.|++++++++++. |+..+.+.++..|.
T Consensus        57 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~n~~a~  136 (166)
T 1cjw_A           57 VEGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALV  136 (166)
T ss_dssp             ETTEEEEEEEEEEECSSSCCGGGGGCCCTTCCEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTSTTCCEEEEEECGGGH
T ss_pred             ECCeEEEEEEeeeeccccccccccccccCCCCceEEEEEEECHhhccCChHHHHHHHHHHHHHHhcCcceEEEecCchHH
Confidence            467999999887653             2346899999999999999999999999999999995 99999998877899


Q ss_pred             hhhhhcCcccccc
Q 009150          206 GFWHKQDTSADTA  218 (542)
Q Consensus       206 ~Fw~KqGF~~~~~  218 (542)
                      .||+|+||+..+.
T Consensus       137 ~~y~k~GF~~~~~  149 (166)
T 1cjw_A          137 PFYQRFGFHPAGP  149 (166)
T ss_dssp             HHHHTTTEEEEEE
T ss_pred             HHHHHcCCeECCc
Confidence            9999999999885

>3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp}

Probab=99.19  E-value=5.5e-10  Score=96.59  Aligned_cols=77  Identities=12%  Similarity=0.111  Sum_probs=67.6

Q ss_pred             CCc-EEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          141 DDV-VVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       141 ~~~-VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      +++ +||.+.+....  ...++|..++|+|+|||+|||+.|++++++.+++.|+..+.+.+..   .|..||+|+||+..
T Consensus        61 ~~~~~vG~~~~~~~~--~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~  138 (163)
T 3d8p_A           61 NHQNIVGTIGLIRLD--NNMSALKKMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSNNGFREI  138 (163)
T ss_dssp             TTCCEEEEEEEEECS--TTEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTCEEE
T ss_pred             CCCeEEEEEEEEecC--CCEEEEEEEEEChhhccCCHHHHHHHHHHHHHHHCCCeEEEEEecCCCHHHHHHHHHCCCEEe
Confidence            456 99998776544  3578899999999999999999999999999999999999887765   48999999999999


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       139 ~~~  141 (163)
T 3d8p_A          139 KRG  141 (163)
T ss_dssp             CGG
T ss_pred             eec
Confidence            875

>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium}

Probab=99.19  E-value=2.1e-11  Score=108.57  Aligned_cols=80  Identities=13%  Similarity=0.117  Sum_probs=66.6

Q ss_pred             CCCcEEEEEEeeecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      ++|++||.+.+...+   .+...++|..++|+++|||+|||+.|++++++++++.|+..+.+.+..   .|..||+|+||
T Consensus        78 ~~~~ivG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF  157 (176)
T 3fyn_A           78 EGTESVGYIVLTLGFSMEYGGLRGFVDDFFVRPNARGKGLGAAALQTVKQGCCDLGVRALLVETGPEDHPARGVYSRAGF  157 (176)
T ss_dssp             ETTEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCCEECCCC--------HHHHTTC
T ss_pred             ECCEEEEEEEEEeccccccCCceEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCC
Confidence            478999999887644   334689999999999999999999999999999999999999887764   58999999999


Q ss_pred             cccccc
Q 009150          214 SADTAV  219 (542)
Q Consensus       214 ~~~~~~  219 (542)
                      +..+..
T Consensus       158 ~~~~~~  163 (176)
T 3fyn_A          158 EESGRM  163 (176)
T ss_dssp             CCCCCC
T ss_pred             eeccce
Confidence            998765

>1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET: ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1i1d_A* 1i21_A

Probab=99.19  E-value=4.9e-11  Score=106.30  Aligned_cols=80  Identities=24%  Similarity=0.172  Sum_probs=69.2

Q ss_pred             CCCcEEEEEEeeeccC----CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~----d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~  215 (542)
                      ++|+|||.+.+.....    ...+++|..++|+|+|||+|||+.|++++++++++.|+..|.+.+......||+|+||+.
T Consensus        72 ~~~~ivG~~~~~~~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~n~~fY~k~GF~~  151 (160)
T 1i12_A           72 RTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKCGFSN  151 (160)
T ss_dssp             TTTEEEEEEEEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHTTCEE
T ss_pred             cCCeEEEEEEEEecccccccCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEEcChhhHHHHHHCCCEE
Confidence            4689999877664431    124789999999999999999999999999999999999999999888899999999998


Q ss_pred             cccc
Q 009150          216 DTAV  219 (542)
Q Consensus       216 ~~~~  219 (542)
                      .+..
T Consensus       152 ~g~~  155 (160)
T 1i12_A          152 AGVE  155 (160)
T ss_dssp             EEEE
T ss_pred             cCee
Confidence            7753

>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A

Probab=99.18  E-value=5.6e-11  Score=101.43  Aligned_cols=80  Identities=13%  Similarity=0.123  Sum_probs=68.4

Q ss_pred             CCCcEEEEEEeeecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      ++|++||.+.+...+   .+...++|..++|+|+|||+|||+.|++++++.+++.|+..+.+.+..   .|..||+|+||
T Consensus        61 ~~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf  140 (152)
T 1qsm_A           61 SSEKIIGMINFFNHMTTWDFKDKIYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKVGY  140 (152)
T ss_dssp             SSCCEEEEEEEEEECCTTCSSCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHHEE
T ss_pred             CCCeEEEEEEEEecCCccccccceEEEEEEechhcccCCHHHHHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHcCC
Confidence            467999999887652   345789999999999999999999999999999999999999776554   48999999999


Q ss_pred             cccccc
Q 009150          214 SADTAV  219 (542)
Q Consensus       214 ~~~~~~  219 (542)
                      +.....
T Consensus       141 ~~~~~~  146 (152)
T 1qsm_A          141 KAPKIL  146 (152)
T ss_dssp             ECSEEE
T ss_pred             CccceE
Confidence            976544

>3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis}

Probab=99.17  E-value=2.5e-10  Score=102.61  Aligned_cols=78  Identities=15%  Similarity=0.146  Sum_probs=69.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      +++++||.+.+...+  ..+++|..++|+|+|||+|||+.|++++++++++.|+..+.+.+..   .|..||+|+||+..
T Consensus        83 ~~~~~vG~~~~~~~~--~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~  160 (187)
T 3pp9_A           83 LHNQIIGFIVLKKNW--NNYAYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNMPGIMLETQNNNVAACKFYEKCGFVIG  160 (187)
T ss_dssp             ETTEEEEEEEEEECT--TSCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             ECCeEEEEEEEEcCC--CCeEEEEEEEECHHHhcCCHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEe
Confidence            367999999877544  3589999999999999999999999999999999999999888775   49999999999998


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       161 ~~~  163 (187)
T 3pp9_A          161 GFD  163 (187)
T ss_dssp             EEE
T ss_pred             ceE
Confidence            865

>3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A*

Probab=99.17  E-value=1.7e-11  Score=110.12  Aligned_cols=77  Identities=22%  Similarity=0.318  Sum_probs=68.6

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++|++||.+.+...   ...++|..++|+|+|||+|||+.|++.+++++++.|+..+.+.+..   .|..||+|+||+..
T Consensus        94 ~~~~ivG~~~~~~~---~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~  170 (183)
T 3fix_A           94 ADSTLIGFIELKII---ANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKNGFKVE  170 (183)
T ss_dssp             ETTEEEEEEEEEEE---TTEEEEEEEEECGGGCCHHHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             eCCEEEEEEEEEeC---CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHHHcCCEEe
Confidence            36899999988776   3589999999999999999999999999999999999999888733   59999999999998


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       171 ~~~  173 (183)
T 3fix_A          171 DTD  173 (183)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            764

>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str}

Probab=99.17  E-value=8.3e-11  Score=103.91  Aligned_cols=80  Identities=9%  Similarity=-0.017  Sum_probs=69.6

Q ss_pred             CCCcEEEEEEeeecc-----------CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---ch
Q 009150          140 DDDVVVAAITYQIVP-----------ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SE  205 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-----------~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~  205 (542)
                      ++|++||.+.+...+           ....+++|..++|+|+|||+|||+.|++++++++++.|+..+.+.+...   |.
T Consensus        73 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~  152 (179)
T 2oh1_A           73 EAGALAGAMIIRKTPSDWDTDLWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFAEKLGIEMSVPFIRLDCIESNETLN  152 (179)
T ss_dssp             TTCCEEEEEEEESSCCHHHHHHHGGGTTSCEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHH
T ss_pred             cCCeEEEEEEEecCCCcchhcccccCCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEecCCcHHHH
Confidence            478999999877542           1246899999999999999999999999999999999999998877653   99


Q ss_pred             hhhhhcCccccccc
Q 009150          206 GFWHKQDTSADTAV  219 (542)
Q Consensus       206 ~Fw~KqGF~~~~~~  219 (542)
                      .||+|+||+..+..
T Consensus       153 ~~y~k~GF~~~~~~  166 (179)
T 2oh1_A          153 QMYVRYGFQFSGKK  166 (179)
T ss_dssp             HHHHHTTCEEEEEE
T ss_pred             HHHHHCCCEEeccc
Confidence            99999999998865

>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1

Probab=99.17  E-value=2.5e-11  Score=103.42  Aligned_cols=79  Identities=6%  Similarity=-0.074  Sum_probs=69.5

Q ss_pred             CCcEEEEEEeeecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150          141 DDVVVAAITYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       141 ~~~VIg~i~~~i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      +|++||.+.+...+   .+...++|..++|+|+|||+|||+.|++++++++++.|+..+.+.+..   .|..||+|+||+
T Consensus        57 ~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~  136 (153)
T 2eui_A           57 EDRLLGFCQLYPSFSSLSLKRVWILNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVSTSVDNEVAQKVYESIGFR  136 (153)
T ss_dssp             SCCEEEEEEEEEEEETTTTEEEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHTTTCB
T ss_pred             CCcEEEEEEEEecCCCCccCceEEEEEEEEcHHHhcCChHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCCE
Confidence            78999999887664   234789999999999999999999999999999999999999887764   499999999999


Q ss_pred             ccccc
Q 009150          215 ADTAV  219 (542)
Q Consensus       215 ~~~~~  219 (542)
                      ..+..
T Consensus       137 ~~~~~  141 (153)
T 2eui_A          137 EDQEF  141 (153)
T ss_dssp             CCCSB
T ss_pred             Eeccc
Confidence            88754

>4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida}

Probab=99.17  E-value=6.6e-11  Score=107.04  Aligned_cols=99  Identities=16%  Similarity=0.174  Sum_probs=73.8

Q ss_pred             CCCCcEEEEEEeeeccCCC-ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEE---ccc-cchhhhhhcCc
Q 009150          139 DDDDVVVAAITYQIVPADT-QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCW---GDK-ESEGFWHKQDT  213 (542)
Q Consensus       139 ~~~~~VIg~i~~~i~~~d~-~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~---a~~-~A~~Fw~KqGF  213 (542)
                      +.+|+|||.+.+....+.. ....+..++|+|+|||+|||++|++++++++++.|+.++.+.   ..| .|..||+|+||
T Consensus        67 ~~dg~ivG~~~~~~~~~~~~~~~~~~~~~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~~l~~~~~~N~~A~~~y~k~GF  146 (173)
T 4h89_A           67 DADGTVLGSANMYPNRPGPGAHVASASFMVAAAARGRGVGRALCQDMIDWAGREGFRAIQFNAVVETNTVAVKLWQSLGF  146 (173)
T ss_dssp             CTTCCEEEEEEEEESSSGGGTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEEETTCHHHHHHHHHTTC
T ss_pred             EeCCeEEEEEEEEecCCCCCceEEEEeeEEEEeeccchHHHHHHHHHHHHHHHCCCcEEEEeeecccCHHHHHHHHHCCC
Confidence            3678999998877654332 234456789999999999999999999999999999998542   223 49999999999


Q ss_pred             cccccccccccCCCCCCCceeEEE
Q 009150          214 SADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       214 ~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +..+.+......|.+....+.+|.
T Consensus       147 ~~~G~~~~~~~~~~~~~~D~~~M~  170 (173)
T 4h89_A          147 RVIGTVPEAFHHPTHGYVGLHVMH  170 (173)
T ss_dssp             EEEEEEEEEEEETTTEEEEEEEEE
T ss_pred             EEEEEEccceECCCCCEeEEEEEE
Confidence            999877554444554222244554

>3pa6_A Microcephalin; BRCT domain, cell cycle; HET: MSE; 1.50A {Homo sapiens} PDB: 3ktf_A* 2wt8_A*

Probab=99.16  E-value=9.1e-11  Score=102.95  Aligned_cols=90  Identities=19%  Similarity=0.185  Sum_probs=74.4

Q ss_pred             CCCCCeEEEEcccCC---hhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHc
Q 009150          394 SNGKCFRIMLMNIAD---DSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFRE  469 (542)
Q Consensus       394 s~~k~~rVlfSG~~d---e~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~  469 (542)
                      |.-++.+|.|.....   +...+.+...++.|||.+.+++ ..+||||+.... +.++-.|...|++||+++||.+|+++
T Consensus         6 p~f~g~vvyvd~~~~~g~~~~s~~l~~~l~~~GA~v~~~l~~~vTHvV~~~~~-~~~~~~A~~~~i~iV~~~Wv~~C~~~   84 (107)
T 3pa6_A            6 PILKDVVAYVEVWSSNGTENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGY-QSTWDKAQKRGVKLVSVLWVEKCRTA   84 (107)
T ss_dssp             CTTTTCEEEEEEBCTTSCCBCHHHHHHHHHHTTCEECSSCCTTCCEEEEESCC-HHHHHHHHHHTCEEECHHHHHHHHHH
T ss_pred             cccCCEEEEEeccCCCChhhHHHHHHHHHHHcCCEEecccCCCccEEEEeCCC-ChHHHHHhcCCCEEECHHHHHHHHHh
Confidence            456778888865542   2223578999999999999997 899999998754 56777888899999999999999999


Q ss_pred             CCCCCCCCcccCCch
Q 009150          470 GRFVDESSYMLNDDD  484 (542)
Q Consensus       470 Gk~LdEe~YeL~d~~  484 (542)
                      |+.+||++|.+....
T Consensus        85 ~~~vdE~~Y~i~~~~   99 (107)
T 3pa6_A           85 GAHIDESLFPAANMN   99 (107)
T ss_dssp             TSCCCGGGSBCCCTT
T ss_pred             CccCChhcccCCCCc
Confidence            999999999987653

>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1

Probab=99.16  E-value=5e-11  Score=104.04  Aligned_cols=79  Identities=18%  Similarity=0.203  Sum_probs=67.4

Q ss_pred             CCCcEEEEEEeeeccC----CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcC
Q 009150          140 DDDVVVAAITYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQD  212 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~----d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqG  212 (542)
                      ++|++||.+.+...+.    +...++|..++|+|+|||+|||+.|++++++.+++.|+..+.+.+..   .|..||+|+|
T Consensus        62 ~~~~ivG~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~G  141 (153)
T 1z4e_A           62 NGEEIVGMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLG  141 (153)
T ss_dssp             ETTEEEEEEEEEEEECSHHHHCEEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHHHT
T ss_pred             cCCcEEEEEEEEecCCcccCCccceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEEccCChHHHHHHHHcC
Confidence            4679999998776542    22467899999999999999999999999999999999999887654   5999999999


Q ss_pred             cccccc
Q 009150          213 TSADTA  218 (542)
Q Consensus       213 F~~~~~  218 (542)
                      |+....
T Consensus       142 F~~~~~  147 (153)
T 1z4e_A          142 FKASHE  147 (153)
T ss_dssp             CEEEEE
T ss_pred             Cceece
Confidence            998764

>2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp}

Probab=99.16  E-value=7.8e-11  Score=103.91  Aligned_cols=82  Identities=24%  Similarity=0.353  Sum_probs=72.3

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc-----ccchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD-----KESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~-----~~A~~Fw~KqGF~  214 (542)
                      ++|++||.+.+...+.....++|..++|+|+|||+|||+.|++.+++++++.|+..+.+.+.     ..|..||+|+||+
T Consensus        75 ~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf~  154 (177)
T 2r7h_A           75 EDDDMAGYACYGPTPATEGTYDLYWIAVAPHRQHSGLGRALLAEVVHDVRLTGGRLLFAETSGIRKYAPTRRFYERAGFS  154 (177)
T ss_dssp             ETTEEEEEEEEEECTTSSSEEEEEEEEECTTTTTTTHHHHHHHHHHHHHHHTTCCEEEEEEECSGGGHHHHHHHHHTTCE
T ss_pred             ECCeEEEEEEEEeccCCCCeEEEEEEEECHHHhCCCHHHHHHHHHHHHHHhcCCCEEEEEeccccccHHHHHHHHHcCCE
Confidence            46899999988887655678999999999999999999999999999999999999988763     2489999999999


Q ss_pred             ccccccc
Q 009150          215 ADTAVSL  221 (542)
Q Consensus       215 ~~~~~~~  221 (542)
                      ..+....
T Consensus       155 ~~~~~~~  161 (177)
T 2r7h_A          155 AEAVLKA  161 (177)
T ss_dssp             EEEEEEE
T ss_pred             eccccHh
Confidence            9887643

>1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related N-acetyltransferase superfamily fold, NYSGXRC, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: d.108.1.1

Probab=99.16  E-value=5.7e-11  Score=102.91  Aligned_cols=76  Identities=17%  Similarity=0.232  Sum_probs=69.4

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTA  218 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~  218 (542)
                      ++|++||.+.+...+   ..++|..++|+|+|||+|||+.|++++++++++.|+..+.+.++..+..||+|+||+..+.
T Consensus        49 ~~~~~vG~~~~~~~~---~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~n~~~~~~y~~~Gf~~~~~  124 (140)
T 1q2y_A           49 DGEKPVGAGRWRMKD---GYGKLERICVLKSHRSAGVGGIIMKALEKAAADGGASGFILNAQTQAVPFYKKHGYRVLSE  124 (140)
T ss_dssp             ETTEEEEEEEEEEET---TEEEEEEEECCGGGTTTTHHHHHHHHHHHHHHHTTCCSEEEEEEGGGHHHHHHTTCEESCS
T ss_pred             ECCeEEEEEEEEEcC---CcEEEEEEEEcHHHhccCHHHHHHHHHHHHHHHCCCcEEEEEecHHHHHHHHHCCCEEecc
Confidence            367999998776532   4789999999999999999999999999999999999999999888999999999999887

>1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1

Probab=99.16  E-value=7.8e-11  Score=104.92  Aligned_cols=79  Identities=19%  Similarity=0.162  Sum_probs=66.7

Q ss_pred             CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcC
Q 009150          140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQD  212 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqG  212 (542)
                      ++|++||.+.+...+    .+...++|..++|+|+|||+|||+.|++++++++++.| ..|.+++..   .|..||+|+|
T Consensus        62 ~~~~ivG~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~g-~~i~l~v~~~N~~A~~fY~k~G  140 (159)
T 1wwz_A           62 VGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYN-DTIELWVGEKNYGAMNLYEKFG  140 (159)
T ss_dssp             ETTEEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTTC-SEEEEEEETTCHHHHHHHHHTT
T ss_pred             ECCEEEEEEEEeccccccccCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcC-CEEEEEEeCCCHHHHHHHHHCC
Confidence            467999998775432    23456899999999999999999999999999999999 999887643   4999999999


Q ss_pred             ccccccc
Q 009150          213 TSADTAV  219 (542)
Q Consensus       213 F~~~~~~  219 (542)
                      |+..+..
T Consensus       141 F~~~~~~  147 (159)
T 1wwz_A          141 FKKVGKS  147 (159)
T ss_dssp             CEEEEEE
T ss_pred             CEEcccc
Confidence            9988753

>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A}

Probab=99.15  E-value=7.5e-11  Score=102.88  Aligned_cols=76  Identities=14%  Similarity=0.132  Sum_probs=65.2

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++|++||.+.+...   ...++|..++|+|+|||+|||+.|++++++.+++.|+..+.+.+..   .|..||+|+||+..
T Consensus        53 ~~~~ivG~~~~~~~---~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~a~~~Y~k~GF~~~  129 (144)
T 2pdo_A           53 VNGEVVGTVMGGYD---GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYERLGYEHA  129 (144)
T ss_dssp             ETTEEEEEEEEEEC---SSCEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEEEEESSCHHHHHHHHHTTCEEC
T ss_pred             cCCcEEEEEEeecC---CCceEEEEEEECccccCCcHHHHHHHHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHHcCCccc
Confidence            46899998876542   2468899999999999999999999999999999999999887643   48999999999986


Q ss_pred             cc
Q 009150          217 TA  218 (542)
Q Consensus       217 ~~  218 (542)
                      +.
T Consensus       130 ~~  131 (144)
T 2pdo_A          130 DV  131 (144)
T ss_dssp             SE
T ss_pred             ce
Confidence            54

>2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A*

Probab=99.15  E-value=4.9e-11  Score=108.51  Aligned_cols=80  Identities=16%  Similarity=0.082  Sum_probs=71.0

Q ss_pred             CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~  215 (542)
                      .+|++||.+.+...+    .....++|..++|+++|||+|||+.|++++++++++.|+..+.+.+......||+|+||+.
T Consensus       102 ~~g~ivG~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~  181 (190)
T 2vez_A          102 GEGRIVGTGSLVVERKFIHSLGMVGHIEDIAVEKGQQGKKLGLRIIQALDYVAEKVGCYKTILDCSEANEGFYIKCGFKR  181 (190)
T ss_dssp             TTSCEEEEEEEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCSEEECCCCGGGHHHHHHTTCCC
T ss_pred             CCCcEEEEEEEEeccccccCCCceEEEEEEEEchhhcCCCHHHHHHHHHHHHHHHcCCeEEEEEeccchHHHHHHCCCee
Confidence            468999999887742    2346899999999999999999999999999999999999999988888889999999998


Q ss_pred             cccc
Q 009150          216 DTAV  219 (542)
Q Consensus       216 ~~~~  219 (542)
                      .+..
T Consensus       182 ~~~~  185 (190)
T 2vez_A          182 AGLE  185 (190)
T ss_dssp             CCCC
T ss_pred             hHHh
Confidence            8754

>3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases, structural genomics, joint CENT structural genomics, JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans}

Probab=99.15  E-value=8.7e-11  Score=103.02  Aligned_cols=76  Identities=17%  Similarity=0.202  Sum_probs=66.4

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      .+|++||.+.+...  +...++|..++|+|+|||+|||++|++++++.++  +...+.+.++..|..||+|+||+..+..
T Consensus        56 ~~~~~vG~~~~~~~--~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~--~~~~~~l~~~~~a~~fY~k~GF~~~~~~  131 (145)
T 3s6f_A           56 PDGQVIGFVNALSD--GILAASIPLLEVQAGWRSLGLGSELMRRVLTELG--DLYMVDLSCDDDVVPFYERLGLKRANAM  131 (145)
T ss_dssp             TTCCEEEEEEEEEC--SSSEEECCCEEECTTSCSSSHHHHHHHHHHHHHC--SCSEEECCCCGGGHHHHHHTTCCCCCCC
T ss_pred             CCCCEEEEEEEEec--CCcEEEEEEEEECHHHhcCcHHHHHHHHHHHHhc--CCCeEEEEECHHHHHHHHHCCCEECCcE
Confidence            37899999866533  4458999999999999999999999999999996  6777888888889999999999998876

>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1

Probab=99.15  E-value=6.7e-11  Score=105.60  Aligned_cols=96  Identities=13%  Similarity=0.097  Sum_probs=73.8

Q ss_pred             CCCcEEEEEEeeeccC---CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~---d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      +++++||.+.+...+.   ....+++ .++|+|+|||||||+.|++++++++++.|+..|.+.+..   .|..||+|+||
T Consensus        60 ~~~~ivG~~~~~~~~~~~~~~~~~~~-~l~V~p~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Yek~GF  138 (166)
T 2ae6_A           60 SGQQLAGFIEVHPPTSLAAHQKQWLL-SIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGF  138 (166)
T ss_dssp             ETTEEEEEEEEECSSSCGGGTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred             eCCEEEEEEEEEeccccCCCceEEEE-EEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEeecCCHHHHHHHHHcCC
Confidence            3679999998876521   2246666 899999999999999999999999999999999887654   49999999999


Q ss_pred             cccccccccccCCCCCCCceeEEE
Q 009150          214 SADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       214 ~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +..+..... .+.+|....+.+|.
T Consensus       139 ~~~~~~~~~-~~~~g~~~d~~~m~  161 (166)
T 2ae6_A          139 VQEAHFKEE-FYINGHYCDDYQYA  161 (166)
T ss_dssp             EEEEEEEEE-EEETTEEEEEEEEE
T ss_pred             EEeeEEcce-EEECCEEchhhhhh
Confidence            998876442 22233223356665

>3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae}

Probab=99.15  E-value=2.2e-10  Score=102.59  Aligned_cols=80  Identities=19%  Similarity=0.134  Sum_probs=69.7

Q ss_pred             CCCcEEEEEEeeeccCC---CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVPAD---TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d---~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      ++|++||.+.+....+.   ...++|..++|+|+|||+|||+.|++++++++++.|+..+.+.+..   .|..||+|+||
T Consensus        81 ~~g~ivG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF  160 (183)
T 3i9s_A           81 EHDKVLGFATYTIMFPAPKLSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITHNCQRLDWTAESTNPTAGKFYKSIGA  160 (183)
T ss_dssp             ETTEEEEEEEEEEESCCGGGCEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHHTTC
T ss_pred             ECCEEEEEEEEEEecCCCCCCCeEEEEeEEECHhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCChHHHHHHHHcCC
Confidence            47899999988766432   3689999999999999999999999999999999999999887754   38999999999


Q ss_pred             cccccc
Q 009150          214 SADTAV  219 (542)
Q Consensus       214 ~~~~~~  219 (542)
                      +..+..
T Consensus       161 ~~~~~~  166 (183)
T 3i9s_A          161 SLIREK  166 (183)
T ss_dssp             EECTTE
T ss_pred             ceeccc
Confidence            998753

>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A*

Probab=99.14  E-value=1.1e-10  Score=103.22  Aligned_cols=94  Identities=20%  Similarity=0.219  Sum_probs=76.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++|++||.+.+...+   ..++|..++|+|+|||+|||+.|++.+++++++.|+..+.+.+..   .|..||+|+||+..
T Consensus        47 ~~~~~vG~~~~~~~~---~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~  123 (160)
T 2cnt_A           47 ADDRMAAFAITQVVL---DEATLFNIAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEA  123 (160)
T ss_dssp             ETTEEEEEEEEEEET---TEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHTCEEE
T ss_pred             ECCeEEEEEEEEecC---CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEEEecCCHHHHHHHHHCCCEEE
Confidence            467999999887654   368899999999999999999999999999999999999887654   58999999999999


Q ss_pred             ccccccccCCCCCCCceeEEE
Q 009150          217 TAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       217 ~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +........+++ .....+|.
T Consensus       124 ~~~~~~~~~~~~-~~d~~~~~  143 (160)
T 2cnt_A          124 TIRRNYYPTAQG-HEDAIIMA  143 (160)
T ss_dssp             EEEEEEEEETTE-EEEEEEEE
T ss_pred             EEEeeeeecCCC-CccEEEEE
Confidence            877443222343 23356666

>1s7k_A Acetyl transferase; GNAT; 1.80A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 1s7l_A* 1s7n_A* 1s7f_A 1z9u_A

Probab=99.13  E-value=1.9e-10  Score=101.27  Aligned_cols=82  Identities=9%  Similarity=0.076  Sum_probs=70.4

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      +++++||.+.+...+.....++|. ++|+|+|||+|||+.|+..+++++++ .|+..+.+.+..   .|..||+|+||+.
T Consensus        77 ~~~~~vG~~~~~~~~~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~Gf~~  155 (182)
T 1s7k_A           77 CQNEMAGVLSFNAIEPINKAAYIG-YWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTL  155 (182)
T ss_dssp             ETTEEEEEEEEEEEETTTTEEEEE-EEECGGGCSSSHHHHHHHHHHHHHHHHCSCCEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred             ECCEEEEEEEEEEccCCCceEEEE-EEECHhhcCCCHHHHHHHHHHHHHHhhCCccEEEEEecCCCHHHHHHHHHCCCEE
Confidence            367999999888776555678886 69999999999999999999999997 899999887765   3899999999999


Q ss_pred             ccccccc
Q 009150          216 DTAVSLK  222 (542)
Q Consensus       216 ~~~~~~~  222 (542)
                      .+.....
T Consensus       156 ~~~~~~~  162 (182)
T 1s7k_A          156 EGCMKQA  162 (182)
T ss_dssp             EEEEEEE
T ss_pred             Eeeeeee
Confidence            8877543

>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1

Probab=99.13  E-value=1.1e-10  Score=107.45  Aligned_cols=62  Identities=13%  Similarity=0.095  Sum_probs=56.5

Q ss_pred             ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCccccccc
Q 009150          158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSADTAV  219 (542)
Q Consensus       158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~~~~  219 (542)
                      ...+|..++|+|+|||+|||++||+++++.+++.|+..|.|.+..   .|..||+|+||+..+..
T Consensus       111 ~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~~~~~~  175 (199)
T 1u6m_A          111 NEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTM  175 (199)
T ss_dssp             TEEEEEEEEECGGGTTSSHHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHHHHHTTTCEEEEEE
T ss_pred             CeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCEEccEE
Confidence            467899999999999999999999999999999999999887764   49999999999998864

>1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor complex, bisubstrate analog, alternate conformations; HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E*

Probab=99.13  E-value=1.1e-10  Score=106.94  Aligned_cols=79  Identities=14%  Similarity=0.172  Sum_probs=70.5

Q ss_pred             CCCcEEEEEEeeeccC-------------CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccccch
Q 009150          140 DDDVVVAAITYQIVPA-------------DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDKESE  205 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~-------------d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~~A~  205 (542)
                      ++|+|||.+.+.....             +...++|..++|+++|||+|||+.|++++++++++. |+..+.+.++..|.
T Consensus        86 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~~n~~a~  165 (207)
T 1kux_A           86 VEGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALV  165 (207)
T ss_dssp             ETTEEEEEEEEEEECSSSCCGGGGGCCCTTCCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHTTSTTCCEEEEEECGGGH
T ss_pred             ECCEEEEEEEEEeecccccccccccccCCCCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEeecHHHH
Confidence            3679999998766432             346899999999999999999999999999999999 99999998888899


Q ss_pred             hhhhhcCcccccc
Q 009150          206 GFWHKQDTSADTA  218 (542)
Q Consensus       206 ~Fw~KqGF~~~~~  218 (542)
                      .||+|+||+..+.
T Consensus       166 ~~y~k~GF~~~~~  178 (207)
T 1kux_A          166 PFYQRFGFHPAGP  178 (207)
T ss_dssp             HHHHTTTCEEEEE
T ss_pred             HHHHHCCCEECCc
Confidence            9999999999984

>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A*

Probab=99.13  E-value=9.2e-11  Score=101.74  Aligned_cols=97  Identities=14%  Similarity=0.087  Sum_probs=76.3

Q ss_pred             CCCcEEEEEEeeeccCCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      ++|++||.+.+.......  ...+|..++|+|+|||+|||+.|++++++++++.|+..+.+.+..   .|..||+|+||+
T Consensus        61 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~  140 (174)
T 3dr6_A           61 ENGVVTGYASFGDWRSFDGFRYTVEHSVYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSLGFT  140 (174)
T ss_dssp             ETTEEEEEEEEEESSSSGGGTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCE
T ss_pred             cCCeEEEEEEEeecCCCCCcceEEEEEEEECHHHccCCHHHHHHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHhCCCE
Confidence            477999999887665332  467899999999999999999999999999999999999877664   489999999999


Q ss_pred             ccccccccccCCCCCCCceeEEE
Q 009150          215 ADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       215 ~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      ..+.........+. .....+|.
T Consensus       141 ~~~~~~~~~~~~g~-~~~~~~m~  162 (174)
T 3dr6_A          141 VTAQMPQVGVKFGR-WLDLTFMQ  162 (174)
T ss_dssp             EEEEEEEEEEETTE-EEEEEEEE
T ss_pred             EEEEccceEEECCe-eEEEEEEE
Confidence            99887443222331 22345555

>2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A*

Probab=99.13  E-value=1.9e-10  Score=99.80  Aligned_cols=80  Identities=25%  Similarity=0.293  Sum_probs=70.0

Q ss_pred             CCCcEEEEEEeeeccC---CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~---d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      ++|++||.+.+...++   ....++|..++|+|+|||+|||+.|++++++.+++.|+..+.+.+..   .|..||+|+||
T Consensus        66 ~~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf  145 (174)
T 2cy2_A           66 ESGEVVGFAAFGPDRASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHLGG  145 (174)
T ss_dssp             TTSCEEEEEEEEECCSCSCTTCCEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred             cCCEEEEEEEEecCCCCCCCCCceEEEEEEECHHHhCcCHHHHHHHHHHHHHHhCCCceEEEEEECCChhHHHHHHHcCC
Confidence            4789999998887652   23689999999999999999999999999999999999999877644   48999999999


Q ss_pred             cccccc
Q 009150          214 SADTAV  219 (542)
Q Consensus       214 ~~~~~~  219 (542)
                      +..+..
T Consensus       146 ~~~~~~  151 (174)
T 2cy2_A          146 VLLGER  151 (174)
T ss_dssp             EEEEEE
T ss_pred             eeeceE
Confidence            998854

>2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1

Probab=99.13  E-value=1.2e-10  Score=100.31  Aligned_cols=80  Identities=20%  Similarity=0.304  Sum_probs=70.8

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++|++||.+.+...+.. ..++|..++|+|+|||+|||+.|+.++.+++++.|+..+.+.+..   .|..||+|+||+..
T Consensus        57 ~~~~~vG~~~~~~~~~~-~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~  135 (162)
T 2fia_A           57 HEEMIFSMATFCMEQEQ-DFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKI  135 (162)
T ss_dssp             ETTEEEEEEEEEECTTC-SEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             ECCEEEEEEEEeeCCCC-CceEEEEEEEcccccCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCEEE
Confidence            36799999988877644 678899999999999999999999999999999999999887763   59999999999998


Q ss_pred             cccc
Q 009150          217 TAVS  220 (542)
Q Consensus       217 ~~~~  220 (542)
                      +...
T Consensus       136 ~~~~  139 (162)
T 2fia_A          136 HESL  139 (162)
T ss_dssp             EEEC
T ss_pred             eeEe
Confidence            8763

>2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A*

Probab=99.12  E-value=1.3e-10  Score=104.77  Aligned_cols=78  Identities=12%  Similarity=0.037  Sum_probs=65.9

Q ss_pred             CCcEEEEEEeeecc--CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCccc
Q 009150          141 DDVVVAAITYQIVP--ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       141 ~~~VIg~i~~~i~~--~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      +++|||.+.+...+  .....++|..++|+|+|||+|||++||+++++.+++.|+..|.|.+..   .|..||+|+||+.
T Consensus        68 ~~~ivG~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~~  147 (170)
T 2bei_A           68 GPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKALGAQD  147 (170)
T ss_dssp             CCEEEEEEEEEEEEETTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred             CCcEEEEEEEEeeccccCCCcEEEEEEEEChHhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeccCHHHHHHHHHCCCEe
Confidence            67899988765432  122468899999999999999999999999999999999999877654   4999999999997


Q ss_pred             ccc
Q 009150          216 DTA  218 (542)
Q Consensus       216 ~~~  218 (542)
                      .+.
T Consensus       148 ~~~  150 (170)
T 2bei_A          148 LTE  150 (170)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            654

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=99.12  E-value=6.3e-11  Score=126.61  Aligned_cols=88  Identities=26%  Similarity=0.348  Sum_probs=78.1

Q ss_pred             ccCCCCCeEEEEcccCChh---hHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcC-CeEeCHHHHHHH
Q 009150          392 FQSNGKCFRIMLMNIADDS---KKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSG-AWIVSPNWLKES  466 (542)
Q Consensus       392 ~~s~~k~~rVlfSG~~de~---kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G-~wIVSpsWL~dS  466 (542)
                      ..+...+++|+|||+.+..   .+..+..+++.+||.+..++ ..|||||+... +|.|+..|...| ++||+++||.+|
T Consensus       349 k~~~L~G~~IvfSG~~p~~~~~~r~~l~~~~~~lGa~~~~~vs~~vTHLVa~~~-~t~K~~~A~~~g~IkIVs~~WL~dc  427 (442)
T 3ef1_A          349 KQKVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEVVLDFSVPPTHLIAAKI-RTEKVKKAVSMGNIKVVKLNWLTES  427 (442)
T ss_dssp             HHTTSTTCEEEEESSSCTTSCSTTSHHHHHHHTTTCEECSSSSSCCSEEEECSC-CCHHHHHHHHHSSSEEEEHHHHHHH
T ss_pred             hhcccCCcEEEEecccCCCCCccHHHHHHHHHHcCCEEeCCCCCCceEEEeCCC-CCHHHHHHHhcCCCEEEeHHHHHHH
Confidence            3556788999999988543   24679999999999999998 89999999975 699999999995 999999999999


Q ss_pred             HHcCCCCCCCCccc
Q 009150          467 FREGRFVDESSYML  480 (542)
Q Consensus       467 lk~Gk~LdEe~YeL  480 (542)
                      ++.++.+||.+|.+
T Consensus       428 l~~~krldE~~YlL  441 (442)
T 3ef1_A          428 LSQWKRLPESDYLL  441 (442)
T ss_dssp             HHHTSCCCGGGTBC
T ss_pred             HHcCCcCChhcccc
Confidence            99999999999986

>2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Xanthomonas campestris PV}

Probab=99.12  E-value=1.2e-10  Score=100.66  Aligned_cols=79  Identities=13%  Similarity=0.034  Sum_probs=69.9

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccccccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVS  220 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~~  220 (542)
                      ++++||.+.+....  ..+++|..++|+|+|||+|||+.|++++++.+++.|+..+.+.+. .|..||+|+||+..+...
T Consensus        53 ~~~~vG~~~~~~~~--~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~-~a~~~y~k~GF~~~~~~~  129 (142)
T 2ozh_A           53 DGRQVAFARVISDY--ATFAYLGDVFVLPEHRGRGYSKALMDAVMAHPDLQGLRRFSLATS-DAHGLYARYGFTPPLFPQ  129 (142)
T ss_dssp             TTEEEEEEEEEECS--SSEEEEEEEEECGGGTTSSHHHHHHHHHHHCGGGSSCSEEECCCS-SCHHHHHTTTCCSCSSGG
T ss_pred             CCEEEEEEEEEecC--CCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEecc-hHHHHHHHCCCEEcCCcc
Confidence            67999998776643  358999999999999999999999999999999999999998887 899999999999988764


Q ss_pred             cc
Q 009150          221 LK  222 (542)
Q Consensus       221 ~~  222 (542)
                      ..
T Consensus       130 ~~  131 (142)
T 2ozh_A          130 SL  131 (142)
T ss_dssp             GC
T ss_pred             ee
Confidence            33

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=99.12  E-value=9.9e-11  Score=122.70  Aligned_cols=87  Identities=25%  Similarity=0.341  Sum_probs=77.1

Q ss_pred             cCCCCCeEEEEcccCChh---hHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhc-CCeEeCHHHHHHHH
Q 009150          393 QSNGKCFRIMLMNIADDS---KKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCS-GAWIVSPNWLKESF  467 (542)
Q Consensus       393 ~s~~k~~rVlfSG~~de~---kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~-G~wIVSpsWL~dSl  467 (542)
                      .+..++++|+|||+.+..   .+..+..+++.+||++..++ ..|||||++.. +|.|+..|... |++||+|+||.+|+
T Consensus       280 ~~~L~G~~ivfSG~~~~~~~~~~~~l~~l~~~lGa~v~~~vs~~vTHLVa~~~-~t~K~~~A~~~~~I~IV~~~Wl~~c~  358 (372)
T 3ef0_A          280 QKVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEVVLDFSVPPTHLIAAKI-RTEKVKKAVSMGNIKVVKLNWLTESL  358 (372)
T ss_dssp             TTTSTTCEEEEESSSCTTSCTTTSHHHHHHHHTTCEEESSSSSCCSEEEECSC-CCHHHHHHHHSSSCCEEEHHHHHHHH
T ss_pred             hhhcCCcEEEEecccCCCcchhHHHHHHHHHHcCCEEeCcCCCCceEEEEcCC-CchHHHHHHhcCCCEEEcHHHHHHHH
Confidence            456788999999997532   24678999999999999998 79999999975 58999999998 79999999999999


Q ss_pred             HcCCCCCCCCccc
Q 009150          468 REGRFVDESSYML  480 (542)
Q Consensus       468 k~Gk~LdEe~YeL  480 (542)
                      ++++.+||++|.+
T Consensus       359 ~~~~~vdE~~Y~l  371 (372)
T 3ef0_A          359 SQWKRLPESDYLL  371 (372)
T ss_dssp             HTTSCCCGGGGBC
T ss_pred             HhCCcCChhhcee
Confidence            9999999999986

>1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1

Probab=99.12  E-value=1.7e-10  Score=103.71  Aligned_cols=78  Identities=19%  Similarity=0.187  Sum_probs=69.7

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqGF~~~  216 (542)
                      +++++||.+.+...  +...++|..++|+|+|||+|||+.|++.+.+.+++.|+..+.+.+...   |..||+|+||+..
T Consensus        46 ~~~~~vG~~~~~~~--~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~  123 (163)
T 1yvk_A           46 AGDELAGVYVLLKT--RPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGTGNSSIHQLSLYQKCGFRIQ  123 (163)
T ss_dssp             ETTEEEEEEEEEEC--STTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             ECCEEEEEEEEEec--CCCeEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEcCCCCHHHHHHHHHCCCEEe
Confidence            36799999877654  346899999999999999999999999999999999999998888775   8999999999999


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       124 ~~~  126 (163)
T 1yvk_A          124 AID  126 (163)
T ss_dssp             EEE
T ss_pred             cee
Confidence            865

>4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti}

Probab=99.12  E-value=1.7e-10  Score=105.31  Aligned_cols=64  Identities=16%  Similarity=0.053  Sum_probs=58.1

Q ss_pred             CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCccccccc
Q 009150          156 DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADTAV  219 (542)
Q Consensus       156 d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~~~  219 (542)
                      ...+.+|..++|+|+|||+|||++|++++++.+++.|+..+.+.+.+ .|..||+|+||+..+.+
T Consensus       123 ~~~~~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~~~~~n~~a~~~Y~k~GF~~~~~~  187 (217)
T 4fd4_A          123 LEKAYHVHILAVDPTYRGHSLGQRLLQFQMDLSKKLGFKAISGDFTSVFSVKLAEKLGMECISQL  187 (217)
T ss_dssp             CSCEEEEEEEEECTTSCSSCHHHHHHHHHHHHHHHHTCSEEEEEECSHHHHHHHHHTTCEEEEEE
T ss_pred             CCceEEEEEEEECHHHccCCHHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHCCCeEEEeE
Confidence            44677888999999999999999999999999999999999886654 59999999999999876

>1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1

Probab=99.11  E-value=1.9e-10  Score=102.44  Aligned_cols=78  Identities=17%  Similarity=0.149  Sum_probs=69.3

Q ss_pred             CcEEEEEEeeeccC-CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCccccc
Q 009150          142 DVVVAAITYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSADT  217 (542)
Q Consensus       142 ~~VIg~i~~~i~~~-d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~~  217 (542)
                      |++||.+.+...+. +...++|..++|+|+|||+|||+.|++++++++++.|+..|.+.+..   .|..||+|+||+..+
T Consensus        94 ~~~vG~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~  173 (180)
T 1ufh_A           94 KDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETD  173 (180)
T ss_dssp             SCEEEEEEEEECTTCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHHHHTTCCCCC
T ss_pred             CCEEEEEEEEecCCCCCCcEEEEEEEECHhhcCCChHHHHHHHHHHHHHHCCCCEEEEEeccCcHHHHHHHHHCCCEEee
Confidence            89999998887653 24689999999999999999999999999999999999999998864   499999999999887


Q ss_pred             cc
Q 009150          218 AV  219 (542)
Q Consensus       218 ~~  219 (542)
                      ..
T Consensus       174 ~~  175 (180)
T 1ufh_A          174 VV  175 (180)
T ss_dssp             CC
T ss_pred             eE
Confidence            53

>3tth_A Spermidine N1-acetyltransferase; central intermediary metabolism; 3.30A {Coxiella burnetii}

Probab=99.11  E-value=2.4e-10  Score=100.32  Aligned_cols=99  Identities=10%  Similarity=0.043  Sum_probs=76.9

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEcccc---chhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDKE---SEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~~---A~~Fw~KqGF~~  215 (542)
                      .+|++||.+.+.........++|. ++|+|+|||+|||+.|+..+.+++.+. |+..|.+.+...   |..||+|+||+.
T Consensus        65 ~~~~~vG~~~~~~~~~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~GF~~  143 (170)
T 3tth_A           65 LKDNKVGLVELTEIDFIHRRCEFA-IIISPGEEGKGYATEATDLTVEYAFSILNLHKIYLLVDEDNPAALHIYRKSGFAE  143 (170)
T ss_dssp             TTCCEEEEEEEEEEETTTTEEEEE-EEECTTSCSSCSHHHHHHHHHHHHHHTSCCCEEEEEEETTCHHHHHHHHTTTCEE
T ss_pred             CCCCEEEEEEEEecccccceEEEE-EEECccccCCCHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHCCCeE
Confidence            578999999887666555678775 699999999999999999999999764 999998877653   999999999999


Q ss_pred             cccccccccCCCCCCCceeEEE-Eec
Q 009150          216 DTAVSLKFCFPVKPCEKSSLVT-VNR  240 (542)
Q Consensus       216 ~~~~~~~~~~~~~~c~ea~lm~-l~~  240 (542)
                      .+..+..... +|......+|. +.+
T Consensus       144 ~g~~~~~~~~-~g~~~d~~~~~l~~~  168 (170)
T 3tth_A          144 EGKLVDEYYS-KGRYRTAIRMYVLKK  168 (170)
T ss_dssp             EEEEEEEEEE-TTEEEEEEEEEECCC
T ss_pred             EEEEEEeEEE-CCEEEeehhHhhhhh
Confidence            9987544333 33233455555 443

>3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile}

Probab=99.11  E-value=1.7e-10  Score=98.68  Aligned_cols=80  Identities=16%  Similarity=0.135  Sum_probs=68.1

Q ss_pred             CCCcEEEEEEeeecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEccc---cchhhhhhcC
Q 009150          140 DDDVVVAAITYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG-IRTIFCWGDK---ESEGFWHKQD  212 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~G-I~~I~l~a~~---~A~~Fw~KqG  212 (542)
                      ++|++||.+.+...+   .+...++|..++|+|+|||+|||+.|++++++++++.| +..+.+.+..   .|..||+|+|
T Consensus        62 ~~~~~vG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~~~~~~i~~~~~~~n~~a~~~y~k~G  141 (157)
T 3dsb_A           62 VFDKVVAQIMYTYEWSDWRNGNFLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKENINAKATYESLN  141 (157)
T ss_dssp             ETTEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEEEEEEETTCTTHHHHHHTTT
T ss_pred             eCCcEEEEEEEEEeccccCCCceEEEEEEEECHHHhcCCHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHCC
Confidence            468999999886543   34467789999999999999999999999999999999 9888776554   4899999999


Q ss_pred             ccccccc
Q 009150          213 TSADTAV  219 (542)
Q Consensus       213 F~~~~~~  219 (542)
                      |+..+..
T Consensus       142 f~~~~~~  148 (157)
T 3dsb_A          142 MYECDYN  148 (157)
T ss_dssp             CEECSEE
T ss_pred             CEEecce
Confidence            9987653

>1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1

Probab=99.10  E-value=2.3e-10  Score=103.36  Aligned_cols=95  Identities=18%  Similarity=0.125  Sum_probs=73.5

Q ss_pred             CCcEEEEEEeeeccCC---CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150          141 DDVVVAAITYQIVPAD---TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d---~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      +|++||.+.+......   ...++| .++|+|+|||||||+.|++++++++++.|+..|.+.+..   .|..||+|+||+
T Consensus        61 ~~~ivG~~~~~~~~~~~~~~~~~e~-~l~V~p~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~yek~GF~  139 (175)
T 1vhs_A           61 NGNVAAWISFETFYGRPAYNKTAEV-SIYIDEACRGKGVGSYLLQEALRIAPNLGIRSLMAFIFGHNKPSLKLFEKHGFA  139 (175)
T ss_dssp             TSCEEEEEEEEESSSSGGGTTEEEE-EEEECGGGCSSSHHHHHHHHHHHHGGGGTCSEEEEEEETTCHHHHHHHHHTTCE
T ss_pred             CCcEEEEEEEeccCCCCccCCEEEE-EEEEChhhcCCCHHHHHHHHHHHHHHhCCceEEEEEEecCCHHHHHHHHHCCCE
Confidence            3899999988765421   135666 799999999999999999999999999999999887554   499999999999


Q ss_pred             ccccccccccCCCCCCCceeEEE
Q 009150          215 ADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       215 ~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      ..+...... |..|......+|.
T Consensus       140 ~~g~~~~~~-~~~g~~~d~~~m~  161 (175)
T 1vhs_A          140 EWGLFPGIA-EMDGKRYDLKILG  161 (175)
T ss_dssp             EEEEEEEEE-EETTEEEEEEEEE
T ss_pred             EEeEcccce-eeCCEEEEEEEEE
Confidence            988764332 2223234466776

>1y7r_A Hypothetical protein SA2161; structural genomics, protein structure initiative, PSI, midwest center for structural genomics; 1.70A {Staphylococcus aureus} SCOP: d.108.1.1

Probab=99.10  E-value=4.4e-10  Score=95.97  Aligned_cols=78  Identities=15%  Similarity=0.137  Sum_probs=64.6

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEE--EEEccccchhhhhhcCccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTI--FCWGDKESEGFWHKQDTSADT  217 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I--~l~a~~~A~~Fw~KqGF~~~~  217 (542)
                      +++++||.+.+...  +...++|..++|+|+|||+|||+.|++.+++++++.|+..+  .+.++..+..||+|+||+..+
T Consensus        46 ~~~~~vG~~~~~~~--~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~~~~~~~~n~~a~~~y~k~Gf~~~~  123 (133)
T 1y7r_A           46 DKDRLIGMGRVIGD--GGTVFQIVDIAVLKSYQGQAYGSLIMEHIMKYIKNVSVESVYVSLIADYPADKLYVKFGFMPTE  123 (133)
T ss_dssp             ETTEEEEEEEEEEC--SSSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHCCTTCEEEEEEETTHHHHHHTTTCEECT
T ss_pred             ECCEEEEEEEEEcc--CCCeEEEEEEEEcHHHhcCchHHHHHHHHHHHHHHcCCCEEEEEEeCCchHHHHHHHcCCeECC
Confidence            36799999877543  33588999999999999999999999999999999997644  445555689999999999876


Q ss_pred             cc
Q 009150          218 AV  219 (542)
Q Consensus       218 ~~  219 (542)
                      ..
T Consensus       124 ~~  125 (133)
T 1y7r_A          124 PD  125 (133)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>1yre_A Hypothetical protein PA3270; APC5563, midwest center for structural genomics, MSC protein structure initiative, PSI, MCSG; HET: COA; 2.15A {Pseudomonas aeruginosa} SCOP: d.108.1.1

Probab=99.10  E-value=2.7e-10  Score=103.22  Aligned_cols=98  Identities=7%  Similarity=0.032  Sum_probs=79.9

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      ++|++||.+.+.....+...++|..++|+++|||+|||+.|+..+++++++ .|+..|.+.+..   .|..||+|+||+.
T Consensus        77 ~~~~~iG~~~~~~~~~~~~~~~i~~l~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~  156 (197)
T 1yre_A           77 LGVQLVGTTRFAEFLPALPACEIGWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQR  156 (197)
T ss_dssp             ETTEEEEEEEEEEEETTTTEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEE
T ss_pred             ECCeEEEEEEEEeecCCcCeeEEEEEEECHhHhcCCHHHHHHHHHHHHHHhhcCccEEEEEEcCCCHHHHHHHHHcCCee
Confidence            368999999887665555789999999999999999999999999999999 899999877765   3899999999999


Q ss_pred             cccccccccCCCCCCCceeEEE
Q 009150          216 DTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       216 ~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      .+.......+++|......+|.
T Consensus       157 ~g~~~~~~~~~~g~~~d~~~~~  178 (197)
T 1yre_A          157 EGVLRNHRRLAGGRLDDTFVYS  178 (197)
T ss_dssp             EEEEEEEEECTTSCEEEEEEEE
T ss_pred             eeeecceEEcCCCcEEEEEEEE
Confidence            9887655445444233455555

>2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics, structural genomics consortium, SGC; HET: 16G COA; 1.80A {Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A

Probab=99.10  E-value=2e-10  Score=103.53  Aligned_cols=79  Identities=20%  Similarity=0.125  Sum_probs=70.2

Q ss_pred             CCcEEEEEEeeeccC----CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccc
Q 009150          141 DDVVVAAITYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSAD  216 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~----d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~  216 (542)
                      +|++||.+.+...+.    ....++|..++|+|+|||+|||+.|++++++++++.|+..|.+.+......||+|+||+..
T Consensus        94 ~g~ivG~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~  173 (184)
T 2o28_A           94 LGQIVATATLIIEHKFIHSCAKRGRVEDVVVSDECRGKQLGKLLLSTLTLLSKKLNCYKITLECLPQNVGFYKKFGYTVS  173 (184)
T ss_dssp             TTEEEEEEEEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTEEEEEEEECGGGHHHHHTTTCEEC
T ss_pred             CCcEEEEEEEEeccccCCCCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHHHCCCeee
Confidence            689999998876532    2358899999999999999999999999999999999999999888777999999999988


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       174 ~~~  176 (184)
T 2o28_A          174 EEN  176 (184)
T ss_dssp             SSE
T ss_pred             ccc
Confidence            765

>2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V}

Probab=99.09  E-value=5.7e-10  Score=100.90  Aligned_cols=95  Identities=16%  Similarity=0.119  Sum_probs=77.2

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccc--cChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQH--KGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~Qg--kGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      ++|++||.+.+.....  ..++|..++|+|+|||  +|||+.|++++++++++.|+..|.+.+..   .|..||+|+||+
T Consensus        78 ~~g~ivG~~~~~~~~~--~~~~i~~~~V~p~~rg~~~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~  155 (181)
T 2q7b_A           78 ENEKVVGSIALLRIDD--KTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFK  155 (181)
T ss_dssp             ETTEEEEEEEEEECSS--SEEEEEEEEECGGGSSTTTCHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCE
T ss_pred             ECCEEEEEEEEEEcCC--CEEEEEEEEEChhhcCccccHHHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHCCCE
Confidence            3679999998876643  4789999999999999  99999999999999999999999887765   389999999999


Q ss_pred             ccccccccccCCCCCCCceeEEE
Q 009150          215 ADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       215 ~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      ..+....-..|+++ -..+.+|.
T Consensus       156 ~~~~~~~~~~~~~~-~~~~~~~~  177 (181)
T 2q7b_A          156 QITRDELDVDYIFP-DRDSRIYV  177 (181)
T ss_dssp             EECTTTCCCSCCCC-SSSEEEEE
T ss_pred             EeeeeeccccccCC-CcceeeEE
Confidence            99877443445433 23355655

>3pzj_A Probable acetyltransferases; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: MSE; 1.85A {Chromobacterium violaceum}

Probab=99.09  E-value=9.3e-11  Score=108.74  Aligned_cols=123  Identities=11%  Similarity=0.085  Sum_probs=90.1

Q ss_pred             cccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCc
Q 009150          115 RSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIR  194 (542)
Q Consensus       115 ~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~  194 (542)
                      ...|+.+..-+.....+++..   .+++++||.+.+.....+...++|..+.|+++|||+|||+.|+..+++++.+.|+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~i~~---~~~~~~iG~~~l~~~~~~~~~~ei~~~~v~~~~~g~Gig~~ll~~l~~~a~~~g~~  154 (209)
T 3pzj_A           78 FITWLALTVAQSDTALYVVCA---KDSDQALGFLGYRQMVQAHGAIEIGHVNFSPALRRTRLATEAVFLLLKTAFELGYR  154 (209)
T ss_dssp             HHHHHHHHHHSTTCEEEEEEE---TTCCCCCEEEEEEEEEGGGTEEEEEEEEECTTTTTSHHHHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHhcCCCcEEEEEEE---CCCCcEEEEEEeeeecCcCCeEEEEEEEECHHHhcCCHHHHHHHHHHHHHHHcCCc
Confidence            344565554333333343332   24789999998865554556899999999999999999999999999999999999


Q ss_pred             EEEEEcccc---chhhhhhcCccccccccccccCCCCCCCceeEEE-Eecc
Q 009150          195 TIFCWGDKE---SEGFWHKQDTSADTAVSLKFCFPVKPCEKSSLVT-VNRS  241 (542)
Q Consensus       195 ~I~l~a~~~---A~~Fw~KqGF~~~~~~~~~~~~~~~~c~ea~lm~-l~~~  241 (542)
                      .|.+.+...   |..||+|+||+..+..+......+. .....+|. +..+
T Consensus       155 ~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~~~~g~-~~d~~~~~l~~~e  204 (209)
T 3pzj_A          155 RCEWRCDSRNAASAAAARRFGFQFEGTLRQAMVVKRR-NRDTHVFSMLDGE  204 (209)
T ss_dssp             EEEEEEETTCHHHHHHHHHHTCEEEEEEEEEEEETTE-EEEEEEEEEEHHH
T ss_pred             EEEEeecCCCHHHHHHHHHCCCEEeeeecceEecCCc-eeeeEEEEEEHHH
Confidence            998877764   9999999999999887554333332 33355555 5433

>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228}

Probab=99.09  E-value=2.3e-10  Score=100.41  Aligned_cols=95  Identities=14%  Similarity=0.029  Sum_probs=76.4

Q ss_pred             CCCcEEEEEEeeeccC--CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~--d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      +++++||.+.+...+.  ....++|..++|+|  ||+|||+.|++++++++++.|+..|.+.+..   .|..||+|+||+
T Consensus        62 ~~~~~vG~~~~~~~~~~~~~~~~~i~~~~v~~--rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~  139 (169)
T 3g8w_A           62 EDDELVATCTLKQMNYVGKCHKAILENNFVKN--NDEIVNRELINHIIQYAKEQNIETLMIAIASNNISAKVFFSSIGFE  139 (169)
T ss_dssp             SSSCEEEEEEEEECCSTTTTTEEEEEEEEEGG--GCHHHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCE
T ss_pred             ECCEEEEEEEEEeccccccCceEEEEEEEEcc--CCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHcCCE
Confidence            4789999998877653  23689999999999  9999999999999999999999999865543   499999999999


Q ss_pred             ccccccccccCCCCCCCceeEEE
Q 009150          215 ADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       215 ~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      ..+.........+. .....+|.
T Consensus       140 ~~g~~~~~~~~~g~-~~d~~~m~  161 (169)
T 3g8w_A          140 NLAFEKNASKIGNE-YFDENWLI  161 (169)
T ss_dssp             EEEEEEEEEEETTE-EEEEEEEE
T ss_pred             EeeeecCcEEECCE-ehhHHHHH
Confidence            99987555444443 44456666

>3eg7_A Spermidine N1-acetyltransferase; structural genomics, IDP016 transferase, center for structural genomics of infectious D csgid; HET: MSE; 2.38A {Vibrio cholerae} SCOP: d.108.1.0

Probab=99.09  E-value=2.6e-10  Score=100.45  Aligned_cols=96  Identities=9%  Similarity=0.081  Sum_probs=76.4

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      ++|++||.+.+.........++|. ++|+|+|||+|||+.|+.++++++++. |+..|.+.+..   .|..||+|+||+.
T Consensus        66 ~~~~~vG~~~~~~~~~~~~~~~~~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~  144 (176)
T 3eg7_A           66 AQKNLIGLVELIEINYIHRSAEFQ-IIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGFVE  144 (176)
T ss_dssp             TTCCEEEEEEEEEEETTTTEEEEE-EEECGGGTTSSCHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred             cCCCEEEEEEEEecCcccCceEEE-EEECHHHhCCCHHHHHHHHHHHHHHHhCCccEEEEEehhcCHHHHHHHHHCCCEE
Confidence            578999999887766555678786 899999999999999999999999885 99999887765   4899999999999


Q ss_pred             cccccccccCCCCCCCceeEEE
Q 009150          216 DTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       216 ~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      .+.........+. .....+|.
T Consensus       145 ~~~~~~~~~~~g~-~~d~~~~~  165 (176)
T 3eg7_A          145 EGHLVEEFFINGR-YQDVKRMY  165 (176)
T ss_dssp             EEEEEEEEEETTE-EEEEEEEE
T ss_pred             eeeehhhhccCCE-EeehhHHH
Confidence            9987544333332 22345555

>3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1}

Probab=99.09  E-value=3.1e-10  Score=102.74  Aligned_cols=86  Identities=10%  Similarity=0.019  Sum_probs=72.5

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      ++|++||.+.+..... ...++|..++|+|+|||+|||+.|++++++++++. |+..|.+.+..   .|..||+|+||+.
T Consensus        79 ~~g~ivG~~~~~~~~~-~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~  157 (182)
T 3kkw_A           79 HDGQVLGFANFYQWQH-GDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQP  157 (182)
T ss_dssp             ETTEEEEEEEEEEEET-TTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred             eCCeEEEEEEEEeecC-CceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCccEEEEEEecCCHHHHHHHHHCCCeE
Confidence            4789999998876653 45889999999999999999999999999999999 88898776543   4889999999999


Q ss_pred             cccccccccCCCC
Q 009150          216 DTAVSLKFCFPVK  228 (542)
Q Consensus       216 ~~~~~~~~~~~~~  228 (542)
                      .+.....  |++|
T Consensus       158 ~~~~~~~--~~~g  168 (182)
T 3kkw_A          158 RAIAERH--DPDG  168 (182)
T ss_dssp             EEEEEEE--CTTS
T ss_pred             ecccccc--ccCC
Confidence            9877542  4444

>3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1}

Probab=99.09  E-value=9.2e-11  Score=105.51  Aligned_cols=80  Identities=19%  Similarity=0.143  Sum_probs=66.8

Q ss_pred             CCCcEEEEEEeeec--------------------cCCCce--eEee---eeeeccCccccChHHHHHHHHHHHHHHcCCc
Q 009150          140 DDDVVVAAITYQIV--------------------PADTQY--AEVP---LAAVSSIYQHKGVGRLLYLELRKRLQSVGIR  194 (542)
Q Consensus       140 ~~~~VIg~i~~~i~--------------------~~d~~~--aeI~---~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~  194 (542)
                      .+|++||.+.....                    +....+  ++|.   .++|+|+|||+|||+.|++++++.+++.|+.
T Consensus        63 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~  142 (197)
T 3qb8_A           63 ADDNIKAQILNIPYDAYENMHYGNIRETDPMFDLFGNLDSYTPDDKCLYVFAIGSEVTGKGLATKLLKKTIEESSSHGFK  142 (197)
T ss_dssp             TTCCEEEEEEEEEHHHHHTCCCCCCGGGHHHHHHHHGGGGSCCSSCEEEEEEEEESSCSSSHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEEEecCCcccchHHHHHHHHHHHHHHhcCcCcceeeEeeeceEEEECHHHcCCCHHHHHHHHHHHHHHHcCCC
Confidence            47899999665443                    111123  6677   9999999999999999999999999999999


Q ss_pred             EEEEEccc-cchhhhhhcCccccccc
Q 009150          195 TIFCWGDK-ESEGFWHKQDTSADTAV  219 (542)
Q Consensus       195 ~I~l~a~~-~A~~Fw~KqGF~~~~~~  219 (542)
                      .+.+.+.+ .|..||+|+||+..+..
T Consensus       143 ~i~l~~~n~~a~~~y~k~GF~~~~~~  168 (197)
T 3qb8_A          143 YIYGDCTNIISQNMFEKHGFETVGSV  168 (197)
T ss_dssp             EEEEEECSHHHHHHHHHTTCEEEEEE
T ss_pred             EEEEEcCCHHHHHHHHHCCCeEEEEE
Confidence            99998844 59999999999999877

>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1

Probab=99.08  E-value=2.9e-10  Score=98.61  Aligned_cols=80  Identities=11%  Similarity=0.032  Sum_probs=67.6

Q ss_pred             CCCcEEEEEEeeecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      ++|++||.+.+...+   .+...++|..++|+|+|||+|||+.|+..+++++++.|+..+.+.+..   .|..||+|+||
T Consensus        66 ~~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf  145 (166)
T 2fe7_A           66 SEGRPIGYAVFFYSYSTWLGRNGIYLEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGA  145 (166)
T ss_dssp             ETTEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGCC--HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTC
T ss_pred             eCCeEEEEEEEEeccCCcccCCcEEEEEEEECccccCccHHHHHHHHHHHHHHHCCCCEEEEEEccCCHHHHHHHHHcCC
Confidence            468999999887653   344678999999999999999999999999999999999999877655   48999999999


Q ss_pred             cccccc
Q 009150          214 SADTAV  219 (542)
Q Consensus       214 ~~~~~~  219 (542)
                      +..+..
T Consensus       146 ~~~~~~  151 (166)
T 2fe7_A          146 LPQDEW  151 (166)
T ss_dssp             EECTTE
T ss_pred             eEcccE
Confidence            988764

>1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1

Probab=99.08  E-value=3.3e-10  Score=100.74  Aligned_cols=77  Identities=16%  Similarity=0.137  Sum_probs=67.7

Q ss_pred             CcEEEEEEeeeccC-CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCccccc
Q 009150          142 DVVVAAITYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSADT  217 (542)
Q Consensus       142 ~~VIg~i~~~i~~~-d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~~  217 (542)
                      +++||.+.+...+. ....++|..++|+|+|||+|||+.|++.+++++++.|+.+|.+.+..   .|..||+|+||+..+
T Consensus        70 ~~~iG~~~~~~~~~~~~~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~~~g  149 (158)
T 1on0_A           70 KDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETD  149 (158)
T ss_dssp             SCEEEEEEEEECTTCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCCEEEECCCTTCHHHHHHHHHTTCCCCC
T ss_pred             CCceEEEEEEecCCCCCCeEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEEe
Confidence            78999998876542 22578899999999999999999999999999999999999998764   499999999999887


Q ss_pred             c
Q 009150          218 A  218 (542)
Q Consensus       218 ~  218 (542)
                      .
T Consensus       150 ~  150 (158)
T 1on0_A          150 V  150 (158)
T ss_dssp             C
T ss_pred             E
Confidence            4

>3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus}

Probab=99.08  E-value=1.7e-10  Score=99.30  Aligned_cols=96  Identities=15%  Similarity=0.144  Sum_probs=76.5

Q ss_pred             cceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEE
Q 009150          117 MFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTI  196 (542)
Q Consensus       117 ~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I  196 (542)
                      .++.+...+..+..++..     ++|++||.+.+...+++...++|..++|+|+|||+|||+.|++++.+++++  +..+
T Consensus        51 ~~~~~~~~~~~~~~~~~~-----~~~~~vG~~~~~~~~~~~~~~~i~~l~v~p~~rg~Gig~~ll~~~~~~~~~--~~~i  123 (160)
T 3exn_A           51 RDLQTLEVDPRRRAFLLF-----LGQEPVGYLDAKLGYPEAEDATLSLLLIREDHQGRGLGRQALERFAAGLDG--VRRL  123 (160)
T ss_dssp             HHHHHHHTCTTEEEEEEE-----ETTEEEEEEEEEETCSSTTCEEEEEEEECGGGTTSSHHHHHHHHHHHTCTT--CCEE
T ss_pred             HHHHHhhhCCCceEEEEE-----ECCeEEEEEEeecccCCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHhh--CCeE
Confidence            345544334333333333     367999999988876667899999999999999999999999999999999  8888


Q ss_pred             EEEccc---cchhhhhhcCccccccc
Q 009150          197 FCWGDK---ESEGFWHKQDTSADTAV  219 (542)
Q Consensus       197 ~l~a~~---~A~~Fw~KqGF~~~~~~  219 (542)
                      .+.+..   .|..||+|+||+..++.
T Consensus       124 ~~~~~~~n~~a~~~y~~~Gf~~~~~~  149 (160)
T 3exn_A          124 YAVVYGHNPKAKAFFQAQGFRYVKDG  149 (160)
T ss_dssp             EEEEESSCHHHHHHHHHTTCEEEEEC
T ss_pred             EEEEeeCCHHHHHHHHHCCCEEcccC
Confidence            777664   48999999999998865

>2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1

Probab=99.08  E-value=1.9e-10  Score=100.98  Aligned_cols=74  Identities=18%  Similarity=0.140  Sum_probs=66.8

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      ++|++||.+.+.      ..++|..++|+|+|||+|||+.|++.+++++++.|+..+.+.++..|..||+|+||+..+..
T Consensus        69 ~~~~~vG~~~~~------~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~n~~a~~~y~k~GF~~~~~~  142 (172)
T 2fiw_A           69 LQGVPVGFASLK------GPDHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASDNAAEFFAKRGYVAKQRN  142 (172)
T ss_dssp             ETTEEEEEEEEE------TTTEEEEEEECGGGCSSSHHHHHHHHHHHHHHTTTCSEEEEEECTTTHHHHHTTTCEEEEEE
T ss_pred             ECCEEEEEEEEe------cCcEEEEEEECccccCcCHHHHHHHHHHHHHHhcCCcEEEEEeCHHHHHHHHHcCCEEecce
Confidence            367999998876      24679999999999999999999999999999999999999997789999999999997753

>1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1

Probab=99.08  E-value=4.1e-10  Score=99.74  Aligned_cols=80  Identities=9%  Similarity=0.066  Sum_probs=70.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-----cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-----ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-----~A~~Fw~KqGF~  214 (542)
                      ++|++||.+.+.....  ..++|..++|+|+|||+|||+.|+.++++++++.|+..+.+.+..     .|..||+|+||+
T Consensus        53 ~~~~~vG~~~~~~~~~--~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf~  130 (159)
T 1yx0_A           53 EGDELAGCGALKELDT--RHGEIKSMRTSASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQ  130 (159)
T ss_dssp             CSSSEEEEEEEEEEET--TEEECCCCCCSTTTCCSCHHHHHHHHHHHHHHHHTCSCEECCCSSCTTHHHHHHHHHTTSEE
T ss_pred             ECCEEEEEEEEEEcCC--CcEEEEEEEECHhhcCCCHHHHHHHHHHHHHHhCCCcEEEEEecccccCchHHHHHHHcCCE
Confidence            4689999998876653  489999999999999999999999999999999999999887764     489999999999


Q ss_pred             ccccccc
Q 009150          215 ADTAVSL  221 (542)
Q Consensus       215 ~~~~~~~  221 (542)
                      ..+....
T Consensus       131 ~~~~~~~  137 (159)
T 1yx0_A          131 YCEPFAD  137 (159)
T ss_dssp             ECCCCTT
T ss_pred             Ecccccc
Confidence            9887643

>3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 1.87A {Bordetella parapertussis 12822}

Probab=99.08  E-value=1.1e-10  Score=105.74  Aligned_cols=79  Identities=14%  Similarity=0.078  Sum_probs=71.4

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCccccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSADT  217 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~~  217 (542)
                      +|++||.+.+...+....+++|..++|+|+|||+|||+.|++++++++++.|+..|.+.+..   .|..||+|+||....
T Consensus        76 ~g~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~Gf~~~~  155 (189)
T 3d3s_A           76 GGRIDGFVSAYLLPTRPDVLFVWQVAVHSRARGHRLGRAMLGHILERQECRHVRHLETTVGPDNQASRRTFAGLAGERGA  155 (189)
T ss_dssp             TSCEEEEEEEEECSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHHHSGGGTTCCEEEEEECTTCHHHHHHHHHHHHTTTC
T ss_pred             CCEEEEEEEEEEcCCCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCcccc
Confidence            78999999988877566789999999999999999999999999999999999999877665   489999999999877


Q ss_pred             cc
Q 009150          218 AV  219 (542)
Q Consensus       218 ~~  219 (542)
                      ..
T Consensus       156 ~~  157 (189)
T 3d3s_A          156 HV  157 (189)
T ss_dssp             EE
T ss_pred             ce
Confidence            66

>2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1

Probab=99.07  E-value=3.9e-10  Score=100.05  Aligned_cols=96  Identities=11%  Similarity=0.048  Sum_probs=74.5

Q ss_pred             CCCcEEEEEEeeeccC--CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~--d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      +++++||.+.+.....  ....++| .++|+|+|||||||+.|++++++++++.|+..|.+.+..   .|..||+|+||+
T Consensus        65 ~~~~~vG~~~~~~~~~~~~~~~~~~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~  143 (170)
T 2ge3_A           65 ADGDVIGWCDIRRQDRATRAHCGTL-GMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFA  143 (170)
T ss_dssp             ETTEEEEEEEEEECCSTTTTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHHTCE
T ss_pred             ECCEEEEEEEEecccccCCCceEEE-EEEECHHHhCCCHHHHHHHHHHHHHHHCCceEEEEEEEcCCHHHHHHHHHCCCE
Confidence            3679999988776532  2356777 799999999999999999999999999999999887765   499999999999


Q ss_pred             ccccccccccCCCCCCCceeEEE
Q 009150          215 ADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       215 ~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      ..+...... +.+|......+|.
T Consensus       144 ~~~~~~~~~-~~~g~~~d~~~~~  165 (170)
T 2ge3_A          144 HEGRARDAV-SIDGHYIDSLNMA  165 (170)
T ss_dssp             EEEEEEEEE-ESSSCEEEEEEEE
T ss_pred             EEeEecceE-eeCCEEeeeeeEe
Confidence            988764432 2333223345555

>2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A*

Probab=99.06  E-value=4.2e-10  Score=97.04  Aligned_cols=80  Identities=10%  Similarity=0.037  Sum_probs=69.5

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      ++|++||.+.+.... +...++|..++|+|+|||+|||+.|+..+++++++ .|+..+.+.+..   .|..||+|+||+.
T Consensus        57 ~~~~~vG~~~~~~~~-~~~~~~i~~~~v~p~~rg~Gig~~l~~~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~  135 (160)
T 2i6c_A           57 HDGQVLGFANFYQWQ-HGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQP  135 (160)
T ss_dssp             ETTEEEEEEEEEEEE-TTTEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred             eCCeEEEEEEEEEEc-CCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEecCCHHHHHHHHHcCCEE
Confidence            368999999887765 33578999999999999999999999999999999 799999887544   4889999999999


Q ss_pred             ccccc
Q 009150          216 DTAVS  220 (542)
Q Consensus       216 ~~~~~  220 (542)
                      .+...
T Consensus       136 ~~~~~  140 (160)
T 2i6c_A          136 RAIAE  140 (160)
T ss_dssp             EEEEE
T ss_pred             ccccc
Confidence            98553

>3fbu_A Acetyltransferase, GNAT family; structur genomics, PSI2, MCSG, protein structure initiative, midwest for structural genomics; HET: COA; 1.80A {Bacillus anthracis str}

Probab=99.06  E-value=5.3e-10  Score=97.97  Aligned_cols=95  Identities=11%  Similarity=-0.009  Sum_probs=75.6

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      +++++||.+.+...+ +...++|..+ |+|+|||+|||+.|+..+++++.+. |+..|.+.+..   .|..||+|+||+.
T Consensus        65 ~~~~~iG~~~~~~~~-~~~~~~i~~~-v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~  142 (168)
T 3fbu_A           65 GENILVGHIVFHKYF-GEHTYEIGWV-FNPKYFNKGYASEAAQATLKYGFKEMKLHRIIATCQPENTPSYRVMEKIGMRR  142 (168)
T ss_dssp             TTTEEEEEEEEEEEE-TTTEEEEEEE-ECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEE
T ss_pred             CCCCEEEEEEEEeec-CCCcEEEEEE-ECHHHhcCCHHHHHHHHHHHHHHhhCCceEEEEEeccCChHHHHHHHHCCCeE
Confidence            578999999888876 3467877755 9999999999999999999999876 99999888776   3889999999999


Q ss_pred             cccccccccCCCCCCCceeEEE
Q 009150          216 DTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       216 ~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      .+.........+. .....+|.
T Consensus       143 ~g~~~~~~~~~g~-~~d~~~~~  163 (168)
T 3fbu_A          143 EGYFKKCIPHGNE-WWDEYYYA  163 (168)
T ss_dssp             EEEEEEEEEETTE-EEEEEEEE
T ss_pred             EEEeeeeeecCCc-eeeeehee
Confidence            9987554333332 33445555

>3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} SCOP: c.15.1.1 PDB: 3pc8_A* 3qvg_B* 1cdz_A

Probab=99.06  E-value=7.9e-10  Score=96.73  Aligned_cols=86  Identities=15%  Similarity=0.203  Sum_probs=74.5

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhc--CCeEeCHHHHHHHHHcCCC
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCS--GAWIVSPNWLKESFREGRF  472 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~--G~wIVSpsWL~dSlk~Gk~  472 (542)
                      =.++++.|++..+..+++.+...|..+||.+.+.. ++|||+|+... .+.+|-.|...  ++.+|+|+||.+|.+++++
T Consensus         8 F~g~~f~l~~~~p~~~r~~l~ryiia~GG~v~~~~~~~vTHvIt~~~-~d~~~~~a~~~~p~~~~V~P~WI~~Ci~~~kl   86 (104)
T 3pc6_A            8 FEGKHFFLYGEFPGDERRRLIRYVTAFNGELEDYMNERVQFVITAQE-WDPNFEEALMENPSLAFVRPRWIYSCNEKQKL   86 (104)
T ss_dssp             TTTCEEEEESCCSTTHHHHHHHHHHHTTCEECSSCCTTCCEEEESSC-CCHHHHHHHTTCTTCEEECHHHHHHHHHHTSC
T ss_pred             hCCeEEEEcCCCcHHHHHHHHHHHHHcCCEEEcccCCCceEEEeCCC-CChhHHHHhhhCCCCeEEccHHHHHHHhcCcc
Confidence            45789999999865568889999999999988776 88999999986 57888877653  6899999999999999999


Q ss_pred             CCCCCcccCC
Q 009150          473 VDESSYMLND  482 (542)
Q Consensus       473 LdEe~YeL~d  482 (542)
                      +++++|++..
T Consensus        87 vp~~~y~~~~   96 (104)
T 3pc6_A           87 LPHQLYGVVP   96 (104)
T ss_dssp             CCGGGGBCCC
T ss_pred             CCcccceecc
Confidence            9999998754

>2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae}

Probab=99.05  E-value=6.1e-10  Score=99.45  Aligned_cols=97  Identities=11%  Similarity=0.120  Sum_probs=73.3

Q ss_pred             CCCcEEEEEEeeeccC--CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEccc---cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG-IRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~--d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~G-I~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      +++++||.+.+.....  ....++| .++|+|+|||+|||+.|++++++++++.| +..|.+.+..   .|..||+|+||
T Consensus        66 ~~~~~vG~~~~~~~~~~~~~~~~~~-~~~v~~~~~g~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~A~~~yek~GF  144 (172)
T 2i79_A           66 LNGKIAGIVNITADQRKRVRHIGDL-FIVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQLTVQTRNQAAVHLYQKHGF  144 (172)
T ss_dssp             ETTEEEEEEEEECCCSTTTTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTSSCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred             ECCEEEEEEEEEecCCCccceEEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCeEEEEEEEECCCHHHHHHHHHCCC
Confidence            3679999998875441  2346666 58999999999999999999999999998 9999887765   49999999999


Q ss_pred             cccccccccccCCCCCCCceeEEE
Q 009150          214 SADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       214 ~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +..+...+...+.+|......+|.
T Consensus       145 ~~~g~~~~~~~~~~g~~~d~~~m~  168 (172)
T 2i79_A          145 VIEGSQERGAYIEEGKFIDVYLMG  168 (172)
T ss_dssp             EEEEEEEEEEEETTTEEEEEEEEE
T ss_pred             EEEeEEecceEecCCeEeeeEEEE
Confidence            998876532223333222345554

>3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.75A {Listeria innocua} SCOP: d.108.1.0

Probab=99.05  E-value=2.3e-10  Score=99.01  Aligned_cols=76  Identities=12%  Similarity=0.083  Sum_probs=66.8

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++|++||.+.+...+  ...++|..++|+|+|||+|||+.|+++++++++  |+..+.+.+..   .|..||+|+||+..
T Consensus        67 ~~~~~vG~~~~~~~~--~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~--~~~~i~l~v~~~n~~a~~~y~k~Gf~~~  142 (163)
T 3fnc_A           67 QADKVIGFANFIELE--KGKSELAAFYLLPEVTQRGLGTELLEVGMTLFH--VPLPMFVNVEKGNETAIHFYKAKGFVQV  142 (163)
T ss_dssp             ETTEEEEEEEEEEEE--TTEEEEEEEEECGGGCSSSHHHHHHHHHHHHTT--CCSSEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             ECCEEEEEEEEEeCC--CCcEEEEEEEECHHHhCCCHHHHHHHHHHHHhc--cCCEEEEEEeCCCHHHHHHHHHcCCEEE
Confidence            478999999888775  358999999999999999999999999999998  88888777663   48999999999999


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       143 ~~~  145 (163)
T 3fnc_A          143 EEF  145 (163)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            875

>2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1

Probab=99.05  E-value=1.1e-10  Score=98.78  Aligned_cols=76  Identities=20%  Similarity=0.147  Sum_probs=63.9

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEc--cccchhhhhhcCccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWG--DKESEGFWHKQDTSADT  217 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a--~~~A~~Fw~KqGF~~~~  217 (542)
                      ++|++||.+.+...  +...++|..++|+|+|||+|||+.|++++++++++.|+  +.+.+  +..|..||+|+||+..+
T Consensus        49 ~~~~~vG~~~~~~~--~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~~~--~~l~~~~n~~a~~~y~k~Gf~~~~  124 (138)
T 2atr_A           49 DGDAVVGLIRLVGD--GFSSVFVQDLIVLPSYQRQGIGSSLMKEALGNFKEAYQ--VQLATEETEKNVGFYRSMGFEILS  124 (138)
T ss_dssp             ETTEEEEEEEEEEC--SSSEEEEEEEEECTTSCSSSHHHHHHHHHHGGGTTCSE--EECCCCCCHHHHHHHHHTTCCCGG
T ss_pred             ECCeeEEEEEEEeC--CCCeEEEEEEEEchhhcCCCHHHHHHHHHHHHHHhcCe--EEEEeCCChHHHHHHHHcCCcccc
Confidence            36799999876543  34589999999999999999999999999999999988  33444  44699999999999988


Q ss_pred             cc
Q 009150          218 AV  219 (542)
Q Consensus       218 ~~  219 (542)
                      ..
T Consensus       125 ~~  126 (138)
T 2atr_A          125 TY  126 (138)
T ss_dssp             GG
T ss_pred             ee
Confidence            65

>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2}

Probab=99.04  E-value=6.9e-10  Score=96.45  Aligned_cols=73  Identities=19%  Similarity=0.148  Sum_probs=64.4

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++|++||.+.+.    +  .++| .++|+|+|||+|||+.|++++++++++.|+..+.+.+..   .|..||+|+||+..
T Consensus        61 ~~~~~vG~~~~~----~--~~~~-~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~  133 (160)
T 3f8k_A           61 VDGKVVGEASLH----K--DGEF-SLVVHRNYRTLGIGTLLVKTLIEEAKKSGLSTVKFYTLPENTPMIKIGRKLGFKMR  133 (160)
T ss_dssp             ETTEEEEEEEEE----T--TSBE-EEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHHTCEEE
T ss_pred             ECCeEEEEEEee----c--ceEE-EEEECHHHcCCCHHHHHHHHHHHHHHHcCceEEEEEEcccCHHHHHHHHHcCCEEE
Confidence            478999999887    2  5666 899999999999999999999999999999999888765   48899999999998


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       134 ~~~  136 (160)
T 3f8k_A          134 FYE  136 (160)
T ss_dssp             ECS
T ss_pred             eec
Confidence            653

>2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP}

Probab=99.04  E-value=2.5e-10  Score=99.89  Aligned_cols=79  Identities=11%  Similarity=0.020  Sum_probs=69.4

Q ss_pred             CCcEEEEEEeeecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150          141 DDVVVAAITYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       141 ~~~VIg~i~~~i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      +|++||.+.+...+   .+...++|..++|+|+|||+|||+.|++++++++++.|+..|.+.+..   .|..||+|+||+
T Consensus        76 ~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~  155 (172)
T 2r1i_A           76 GEPPTGLAVLSFRPNVWYPGPVAILDELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDARRFYEARGFT  155 (172)
T ss_dssp             TTTTCEEEEEEEECCTTCSSCEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCB
T ss_pred             CCeeEEEEEEEeccCCCCCCceEEEEEEEECcccccCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCE
Confidence            57899999887654   244689999999999999999999999999999999999999887754   589999999999


Q ss_pred             ccccc
Q 009150          215 ADTAV  219 (542)
Q Consensus       215 ~~~~~  219 (542)
                      ..+..
T Consensus       156 ~~~~~  160 (172)
T 2r1i_A          156 NTEPN  160 (172)
T ss_dssp             SSCTT
T ss_pred             ecccC
Confidence            98764

>3igr_A Ribosomal-protein-S5-alanine N-acetyltransferase; fisch MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.00A {Vibrio fischeri} SCOP: d.108.1.0

Probab=99.04  E-value=9.9e-10  Score=97.38  Aligned_cols=82  Identities=12%  Similarity=0.106  Sum_probs=69.5

Q ss_pred             CCCcEEEEEEeeeccC-CCceeEeeeeeeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEcccc---chhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRL-QSVGIRTIFCWGDKE---SEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~-d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~l-k~~GI~~I~l~a~~~---A~~Fw~KqGF~  214 (542)
                      ++|++||.+.+..... ....++|. ++|+|+|||+|||+.|+.++++++ +..|+..|.+.+...   |..||+|+||+
T Consensus        76 ~~~~~vG~~~~~~~~~~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~  154 (184)
T 3igr_A           76 NEHKIIGTVSYSNITRFPFHAGHVG-YSLDSEYQGKGIMRRAVNVTIDWMFKAQNLHRIMAAYIPRNEKSAKVLAALGFV  154 (184)
T ss_dssp             TTTEEEEEEEEEEEECTTTCEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCE
T ss_pred             CCCeEEEEEEeeecccccCceEEEE-EEEChhhccCcHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHcCCE
Confidence            4789999998876553 33577777 689999999999999999999999 778999998887763   99999999999


Q ss_pred             cccccccc
Q 009150          215 ADTAVSLK  222 (542)
Q Consensus       215 ~~~~~~~~  222 (542)
                      ..+.....
T Consensus       155 ~~g~~~~~  162 (184)
T 3igr_A          155 KEGEAKKY  162 (184)
T ss_dssp             EEEEEEEE
T ss_pred             eeeeehhh
Confidence            99877443

>1r57_A Conserved hypothetical protein; GCN5, N-acetyltransferase, structural genomics, PSI, protein structure initiative; NMR {Staphylococcus aureus} SCOP: d.108.1.1 PDB: 2h5m_A*

Probab=99.03  E-value=4.1e-10  Score=94.51  Aligned_cols=75  Identities=20%  Similarity=0.263  Sum_probs=65.0

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcC-cccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQD-TSADTA  218 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqG-F~~~~~  218 (542)
                      +++++||.+.+....  ...++|..++|+|+|||+|||+.|++.+++.+++.|+..+.+...  +..||+|+| |.....
T Consensus        18 ~~~~ivG~~~~~~~~--~~~~~i~~~~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~~--~~nfy~k~~~~~~~~~   93 (102)
T 1r57_A           18 DENNALAEITYRFVD--NNEINIDHTGVSDELGGQGVGKKLLKAVVEHARENNLKIIASCSF--AKHMLEKEDSYQDVYL   93 (102)
T ss_dssp             SSTTEEEEEEEEESS--SSEEEEEEEEECCSSSTTCTHHHHHHHHHHHHHHHTCEEEESSHH--HHHHHHHCGGGTTTBC
T ss_pred             CCCeEEEEEEEEeCC--CCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHcCCCEEEcCHH--HHHHHHhChHHHHHhh
Confidence            467899999877653  247889999999999999999999999999999999998877654  899999999 987653

>4fd5_A Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A {Aedes aegypti} PDB: 4fd6_A

Probab=99.03  E-value=6.3e-10  Score=104.27  Aligned_cols=63  Identities=13%  Similarity=0.108  Sum_probs=57.7

Q ss_pred             CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCccccccc
Q 009150          157 TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADTAV  219 (542)
Q Consensus       157 ~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~~~  219 (542)
                      ..+.+|..++|+|+|||+|||++|++++++.+++.|+..+.+.+.+ .|..||+|+||+..+..
T Consensus       128 ~~~~~i~~~~v~~~~rg~Gig~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~y~~~Gf~~~~~~  191 (222)
T 4fd5_A          128 DKIFEIRILSVDSRFRGKGLAKKLIEKSEELALDRGFQVMKTDATGAFSQRVVSSLGFITKCEI  191 (222)
T ss_dssp             SEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCEEEEEE
T ss_pred             CcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHCCCEEEEEE
Confidence            3688999999999999999999999999999999999998777665 58999999999999876

>3r9f_A MCCE protein; microcin C7, acetyltransferase, SELF immunity, resistance, A coenzyme A, transferase; HET: COA GSU; 1.20A {Escherichia coli} PDB: 3r95_A* 3r96_A* 3r9e_A* 3r9g_A*

Probab=99.02  E-value=1.3e-09  Score=97.67  Aligned_cols=86  Identities=9%  Similarity=0.045  Sum_probs=71.7

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEcccc---chhhhhhcCcccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDKE---SEGFWHKQDTSAD  216 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~~---A~~Fw~KqGF~~~  216 (542)
                      ++++||.+.+.........++|.. .|+|+|||+|||+.++..+++++.+. |+..|.+.+...   |..||+|+||+..
T Consensus        86 ~~~~iG~~~~~~~~~~~~~~~i~~-~v~~~~~g~Gig~~ll~~~~~~a~~~~~~~~i~~~v~~~N~~a~~~y~k~GF~~~  164 (188)
T 3r9f_A           86 KTKIAGVVSFNIIDHANKTAYIGY-WLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLE  164 (188)
T ss_dssp             TTEEEEEEEEEEEETTTTEEEEEE-EECGGGTTSSHHHHHHHHHHHHHHTTTSCSEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             CCEEEEEEEEEEecCCCCEEEEEE-EEChhhcCCCHHHHHHHHHHHHHHHhcCeEEEEEEecCCCHHHHHHHHHCCCeEE
Confidence            679999998876555557888885 89999999999999999999999876 999998877663   8999999999999


Q ss_pred             ccccccccCCC
Q 009150          217 TAVSLKFCFPV  227 (542)
Q Consensus       217 ~~~~~~~~~~~  227 (542)
                      +.........|
T Consensus       165 g~~~~~~~~~g  175 (188)
T 3r9f_A          165 GVLQKAEILNG  175 (188)
T ss_dssp             EEEEEEEEETT
T ss_pred             eEeeeeEEECC
Confidence            88755433333

>3te4_A GH12636P, dopamine N acetyltransferase, isoform A; dopamine/acetyl COA, N-acetyltransferase domain; HET: ACO; 1.46A {Drosophila melanogaster} PDB: 3v8i_A*

Probab=99.02  E-value=6e-10  Score=104.13  Aligned_cols=61  Identities=13%  Similarity=0.082  Sum_probs=56.4

Q ss_pred             eeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCccccccc
Q 009150          159 YAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADTAV  219 (542)
Q Consensus       159 ~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~~~  219 (542)
                      +.+|..++|+|+|||+|||++|++++++.+++.|+..+.+.+.+ .+..||+|+||+.+...
T Consensus       125 ~~~i~~~~v~p~~rg~Gig~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~y~~~Gf~~~~~~  186 (215)
T 3te4_A          125 ILDGKILSVDTNYRGLGIAGRLTERAYEYMRENGINVYHVLCSSHYSARVMEKLGFHEVFRM  186 (215)
T ss_dssp             EEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHTTCEEEEEE
T ss_pred             EEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHHHHHCCCEEEEEE
Confidence            99999999999999999999999999999999999999666544 59999999999999876

>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}

Probab=99.02  E-value=3.5e-11  Score=118.89  Aligned_cols=128  Identities=14%  Similarity=0.174  Sum_probs=74.9

Q ss_pred             HHHHHHHHHHcCcEEeccC--Cc----eeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCCCCcccCC-ch
Q 009150          412 KVHLTKVIEDLGGAVTSDG--ST----STHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLND-DD  484 (542)
Q Consensus       412 k~~L~kiIkkLGG~V~~d~--~~----~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdEe~YeL~d-~~  484 (542)
                      +++|..+|+.+||+++...  ..    +||+|++.  .|.|+-.++..|.+||+|+||.+|+++|++++.++|.+-. ..
T Consensus        28 ~~~L~~li~~~GG~~~~~~~~~t~~~~~~~iI~~~--~t~k~~~~~~~~~~vV~p~Wv~dci~~~~llp~~~y~~~~~~~  105 (264)
T 1z56_C           28 RAELEKTIVEHGGKLIYNVILKRHSIGDVRLISCK--TTTECKALIDRGYDILHPNWVLDCIAYKRLILIEPNYCFNVSQ  105 (264)
T ss_dssp             CCCTHHHHHHHHTTSCCCSSCCCCCSSCCEEEECS--CCGGGGGGTTTTCCCBCSSTTHHHHSSCSCCCCCSCBSCCCGG
T ss_pred             HHHHHHHHHHcCCEEeecCCCCccCccceEEEecC--CcHHHHHHHhCCCCEEechHHHHHhhcCCCCCCChHHhhcCCH
Confidence            4579999999999877543  11    58899985  5788888888899999999999999999999999985421 11


Q ss_pred             hh--------hhcCC------C---hHHHHHHh---------------hcCCCCCCCCeEEEEeCCC-CCCHHHHHHHHH
Q 009150          485 YV--------LKYRS------E---LKDSVLRA---------------KARPGGLLRGYNIIMAAHI-QPPIKTLSAIVR  531 (542)
Q Consensus       485 ~e--------~~~g~------~---L~~sl~rA---------------r~~~~~LF~G~~f~Is~~v-~p~~~~L~~LIe  531 (542)
                      ..        ..||-      +   |+..+...               ...+..||+|++||+.... ....+.++.+|+
T Consensus       106 ~~~~~~~~~~d~~gdsy~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~lF~g~~~yl~~~~~~~~~~~l~~~i~  185 (264)
T 1z56_C          106 KMRAVAEKRVDCLGDSFENDISETKLSSLYKSQLSLPPMGELEIDSEVRRFPLFLFSNRIAYVPRRKISTEDDIIEMKIK  185 (264)
T ss_dssp             GTHHHHGGGBCSSSCBSSSCCCHHHHHHTTSCCSCCCCCCCCSSCCSCCCCCCC--------------------CHHHHH
T ss_pred             HHHHHHHHhccccCCccccCCCHHHHHHHHHhcccccchhhhhhhcccccCchhhhCCeEEEEecCCCchhHHHHHHHHH
Confidence            00        00110      0   11110000               1135679999999998753 223567799999


Q ss_pred             hCCCEEeccC
Q 009150          532 SAGGNVSSKY  541 (542)
Q Consensus       532 agGG~V~~~L  541 (542)
                      ++||+++..|
T Consensus       186 ~~GG~v~~~l  195 (264)
T 1z56_C          186 LFGGKITDQQ  195 (264)
T ss_dssp             HHTTSCCCCS
T ss_pred             HcCCEEeccc
Confidence            9999998754

>2fl4_A Spermine/spermidine acetyltransferase; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: d.108.1.1

Probab=99.02  E-value=6.2e-10  Score=98.41  Aligned_cols=78  Identities=8%  Similarity=0.051  Sum_probs=66.3

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccc---cchhhhhhcCcccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++++||.+.+...+  ...++|..++|+|+|||||||+.|+..+++++++. |+..|.+.+..   .|..||+|+||+..
T Consensus        54 ~~~~iG~~~~~~~~--~~~~~i~~~~v~~~~~g~Gig~~ll~~~~~~~~~~~~~~~i~l~v~~~N~~a~~~Y~k~GF~~~  131 (149)
T 2fl4_A           54 GNQLIGYAMYGRWQ--DGRVWLDRFLIDQRFQGQGYGKAACRLLMLKLIEKYQTNKLYLSVYDTNSSAIRLYQQLGFVFN  131 (149)
T ss_dssp             TTEEEEEEEEEECT--TSCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHSSCSEEEEEECTTCHHHHHHHHHTTCEEE
T ss_pred             CCeEEEEEEEeecC--CCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHhCCCCEEEEEEECCCHHHHHHHHHCCCEEe
Confidence            67899998776544  23567999999999999999999999999999975 79999888754   49999999999988


Q ss_pred             cccc
Q 009150          217 TAVS  220 (542)
Q Consensus       217 ~~~~  220 (542)
                      +...
T Consensus       132 g~~~  135 (149)
T 2fl4_A          132 GELD  135 (149)
T ss_dssp             EEEC
T ss_pred             cccc
Confidence            7653

>1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A*

Probab=99.01  E-value=6.3e-10  Score=99.70  Aligned_cols=81  Identities=6%  Similarity=-0.024  Sum_probs=69.5

Q ss_pred             CCCcEEEEEEeeecc---CCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~  214 (542)
                      ++|++||.+.+...+   .+.  ..++|..++|+|+|||+|||+.|++++++++++ ++.-.....+..|..||+|+||+
T Consensus        54 ~~~~~vG~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~-~~~l~~~~~n~~a~~~y~k~GF~  132 (181)
T 1m4i_A           54 HHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRG-AYQLGALSSSARARRLYASRGWL  132 (181)
T ss_dssp             ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHH-HCSEEEEECCTTTHHHHHHTTCE
T ss_pred             ECCEEEEEEEEEEeccccCCCCcceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHh-CcEEEEecCCHHHHHHHHhcCCE
Confidence            468999999887665   444  688999999999999999999999999999999 77766666777899999999999


Q ss_pred             ccccccc
Q 009150          215 ADTAVSL  221 (542)
Q Consensus       215 ~~~~~~~  221 (542)
                      ..+....
T Consensus       133 ~~~~~~~  139 (181)
T 1m4i_A          133 PWHGPTS  139 (181)
T ss_dssp             ECCSCEE
T ss_pred             EcCCcce
Confidence            9887643

>2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1

Probab=99.01  E-value=9e-10  Score=100.14  Aligned_cols=80  Identities=19%  Similarity=0.218  Sum_probs=68.9

Q ss_pred             CCCcEEEEEEeee-ccC------------CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cch
Q 009150          140 DDDVVVAAITYQI-VPA------------DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESE  205 (542)
Q Consensus       140 ~~~~VIg~i~~~i-~~~------------d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~  205 (542)
                      ++|++||.+.+.. ...            ....++|..++|+|+|||+|||+.|++.+++++++.|+..|.+...+ .|.
T Consensus        74 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~n~~a~  153 (190)
T 2gan_A           74 KDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTLLEFAVKRLRSLGKDPYVVTFPNLEAY  153 (190)
T ss_dssp             ESSCEEEEEEEECSCGGGTCCTTCCGGGCSTTEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCEEEEEECGGGSHH
T ss_pred             ECCEEEEEEEEEecccccccccccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecCCcccc
Confidence            3679999998876 432            33589999999999999999999999999999999999999887443 699


Q ss_pred             hh-hhhcCccccccc
Q 009150          206 GF-WHKQDTSADTAV  219 (542)
Q Consensus       206 ~F-w~KqGF~~~~~~  219 (542)
                      .| |+|+||+..+..
T Consensus       154 ~~~y~k~GF~~~~~~  168 (190)
T 2gan_A          154 SYYYMKKGFREIMRY  168 (190)
T ss_dssp             HHHHHTTTEEEEECC
T ss_pred             ccEEecCCCEEeecc
Confidence            99 999999988765

>2bue_A AAC(6')-IB; GNAT, transferase, aminoglycoside, fluoroquinolone, acetyltransferase, antibiotic resistance; HET: COA RIO; 1.7A {Escherichia coli} PDB: 1v0c_A* 2vqy_A* 2prb_A* 2qir_A* 2pr8_A*

Probab=99.00  E-value=9.2e-10  Score=99.06  Aligned_cols=91  Identities=12%  Similarity=0.051  Sum_probs=75.2

Q ss_pred             CCCcEEEEEEeeecc----------CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cch
Q 009150          140 DDDVVVAAITYQIVP----------ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESE  205 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~----------~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~  205 (542)
                      ++|++||.+.+...+          .+...++|..++|+|+|||+|||+.|++.+++++++ .|+..|.+.+..   .|.
T Consensus        85 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~  164 (202)
T 2bue_A           85 LNGEPIGYAQSYVALGSGDGWWEEETDPGVRGIDQLLANASQLGKGLGTKLVRALVELLFNDPEVTKIQTDPSPSNLRAI  164 (202)
T ss_dssp             ETTEEEEEEEEEEGGGCCTTSSTTCCCTTEEEEEEEESCGGGTTSSHHHHHHHHHHHHHHTSTTCCEEEECCCTTCHHHH
T ss_pred             ECCEEEEEEEEEEecccccccccccCCCCceEEEEEEEChhhccCChHHHHHHHHHHHHHhCCCCcEEEeCcccCCHHHH
Confidence            368999999887542          234689999999999999999999999999999998 599999887655   499


Q ss_pred             hhhhhcCccccccccccccCCCCCCCceeEEE
Q 009150          206 GFWHKQDTSADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       206 ~Fw~KqGF~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      .||+|+||+..+....    ++|   +..+|.
T Consensus       165 ~~y~k~GF~~~~~~~~----~~g---~~~~m~  189 (202)
T 2bue_A          165 RCYEKAGFERQGTVTT----PDG---PAVYMV  189 (202)
T ss_dssp             HHHHHTTCEEEEEEEE----TTE---EEEEEE
T ss_pred             HHHHHcCCEEeeeecC----CCC---ceEEEE
Confidence            9999999999987643    233   367777

>2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1

Probab=99.00  E-value=2.8e-10  Score=100.80  Aligned_cols=78  Identities=13%  Similarity=0.137  Sum_probs=52.6

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++|++||.+.+...+ +...++|..++|+|+|||+|||+.|++++++++++.|+..+.+.+..   .|..||+|+||+..
T Consensus        72 ~~~~~vG~~~~~~~~-~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~  150 (159)
T 2aj6_A           72 NEGQLIAFIWGHFSN-EKSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRISNTIHKNNLPMISLNKDLGYQVS  150 (159)
T ss_dssp             ETTEEEEEEEEEEET-TTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCCCCC--------------------
T ss_pred             ECCeEEEEEEEEeec-CCCEEEEEEEEECHHHccCCHHHHHHHHHHHHHHHcCCcEEEEEeccCCHHHHHHHHHCCCEEe
Confidence            468999999888655 34689999999999999999999999999999999999998776654   49999999999987


Q ss_pred             cc
Q 009150          217 TA  218 (542)
Q Consensus       217 ~~  218 (542)
                      +.
T Consensus       151 ~~  152 (159)
T 2aj6_A          151 HV  152 (159)
T ss_dssp             --
T ss_pred             ee
Confidence            64

>2z10_A Ribosomal-protein-alanine acetyltransferase; alpha/beta protein, acyltransferase, structural genomics, NPPSFA; HET: IYR; 1.77A {Thermus thermophilus} PDB: 2z0z_A* 2z11_A* 2zxv_A*

Probab=98.99  E-value=1.1e-09  Score=99.08  Aligned_cols=103  Identities=8%  Similarity=-0.026  Sum_probs=79.6

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      ++|++||.+.+.....+...++|..+.| |+|||+|||+.|+..+++++++. |+..|.+.+..   .|..||+|+||+.
T Consensus        70 ~~g~~vG~~~~~~~~~~~~~~~i~~~~~-p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~  148 (194)
T 2z10_A           70 FGKEVAGRISVIAPEPEHAKLELGTMLF-KPFWGSPANKEAKYLLLRHAFEVLRAERVQFKVDLRNERSQRALEALGAVR  148 (194)
T ss_dssp             ETTEEEEEEEEEEEEGGGTEEEEEEEEC-GGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEE
T ss_pred             cCCCEEEEEEecccCcccCEEEEeeEEC-HhHhCCcHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHcCCcE
Confidence            4789999998875554556899999888 99999999999999999999986 99999887765   3899999999999


Q ss_pred             cccccccccCCCCCCCceeEEE-Eecccc
Q 009150          216 DTAVSLKFCFPVKPCEKSSLVT-VNRSLE  243 (542)
Q Consensus       216 ~~~~~~~~~~~~~~c~ea~lm~-l~~~~~  243 (542)
                      .+.......+.+|......+|. +..+..
T Consensus       149 ~g~~~~~~~~~~g~~~d~~~~~l~~~~~~  177 (194)
T 2z10_A          149 EGVLRKNRRLPDGAFRDDVVYSVLKEEWP  177 (194)
T ss_dssp             EEEEEEEEECTTSCEEEEEEEEEEGGGHH
T ss_pred             EEecccCEEcCCCeEeeEEEEeeeHHHHH
Confidence            9887654234444233345555 544443

>2ree_A CURA; GNAT, S-acetyltransferase, decarboxylase, polyketid synthase, loading, phosphopantetheine, transferase, lyase; HET: SO4; 1.95A {Lyngbya majuscula} PDB: 2ref_A*

Probab=98.99  E-value=1.4e-09  Score=101.53  Aligned_cols=96  Identities=15%  Similarity=0.118  Sum_probs=72.7

Q ss_pred             CCCcEEEEEEeeecc------------------CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEc
Q 009150          140 DDDVVVAAITYQIVP------------------ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWG  200 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~------------------~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a  200 (542)
                      ++|+|||.+.+....                  +...+++|..++|+|+|||+|||+.||+++++.+++. |+..|.+..
T Consensus        61 ~~g~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~g~~~i~~~l  140 (224)
T 2ree_A           61 LEDKIVGAIYSQRIDNPQLLDNKTCTQVPLLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEKVVAVT  140 (224)
T ss_dssp             ESSCEEEEEEEEEESCGGGGTTCCTTTGGGGCCTTCSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHTTSTTCCEEEEEE
T ss_pred             ECCEEEEEEEEeccCchhhchhhcccchhhccCCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHhcCccEEEEec
Confidence            367999998875431                  1335789999999999999999999999999999997 999997221


Q ss_pred             --------------------------cccchhhhhhcCccccccccccccCC-CC-CCCceeEEE
Q 009150          201 --------------------------DKESEGFWHKQDTSADTAVSLKFCFP-VK-PCEKSSLVT  237 (542)
Q Consensus       201 --------------------------~~~A~~Fw~KqGF~~~~~~~~~~~~~-~~-~c~ea~lm~  237 (542)
                                                +..|..||+|+||+..+....  -|+ ++ ....+.+|.
T Consensus       141 ~~~~~~~~~~~~~~~y~~~~~~~g~~N~~a~~fY~k~GF~~~g~~~~--y~~~~~~~~~~~~~m~  203 (224)
T 2ree_A          141 LCRNYPDYSPMPMAEYIHQKNESGLLVDPLLRFHQIHGAKIEKLLPG--YRPKDWENQTCGVLVS  203 (224)
T ss_dssp             CCSSGGGTTTSCHHHHTTCBCTTSCBSSHHHHHHHHTTCEEEEEETT--SCTTCGGGTTCEEEEE
T ss_pred             cCCccccCCCCCHHHHHHHHhcCCcccCcceeeeecCCeEEEEEccc--cccccccCCCceEEEE
Confidence                                      224899999999998876532  223 21 123378888

>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1

Probab=98.98  E-value=1.5e-09  Score=97.15  Aligned_cols=101  Identities=11%  Similarity=-0.062  Sum_probs=72.0

Q ss_pred             CCCcEEEEEEeeeccCCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      ++|++||.+.+.......  ....+..++|+|+|||+|||+.|++++++++++.|+..+.+.+..   .|..||+|+||+
T Consensus        62 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~  141 (175)
T 1yr0_A           62 LDGKVAGYASYGDWRAFDGYRHTREHSVYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAENTASIRLHESLGFR  141 (175)
T ss_dssp             ETTEEEEEEEEEESSSSGGGTTEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCE
T ss_pred             eCCcEEEEEEEecccCccccCceEEEEEEECccccCCCHHHHHHHHHHHHHHhCCccEEEEEecCCCHHHHHHHHHCCCE
Confidence            367999998876543211  122234689999999999999999999999999999999876543   499999999999


Q ss_pred             ccccccccccCCCCCCCceeEEE-Eecc
Q 009150          215 ADTAVSLKFCFPVKPCEKSSLVT-VNRS  241 (542)
Q Consensus       215 ~~~~~~~~~~~~~~~c~ea~lm~-l~~~  241 (542)
                      ..+...... |..|......+|. +..+
T Consensus       142 ~~g~~~~~~-~~~g~~~d~~~~~~~~~~  168 (175)
T 1yr0_A          142 VVGRFSEVG-TKFGRWLDLTCMELKLGE  168 (175)
T ss_dssp             EEEEEEEEE-EETTEEEEEEEEEEEC--
T ss_pred             EEEEccccc-ccCCEEEEHHHHHHHHhc
Confidence            998764332 2223233345555 4333

>2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A*

Probab=98.98  E-value=8.6e-10  Score=96.66  Aligned_cols=76  Identities=14%  Similarity=0.100  Sum_probs=66.0

Q ss_pred             EEEEEEeeecc--CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccccc
Q 009150          144 VVAAITYQIVP--ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSADTA  218 (542)
Q Consensus       144 VIg~i~~~i~~--~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~~~  218 (542)
                      |||.+.+...+  .....++|..++|+|+|||+|||+.|+.++++++++.|+..+.+.+..   .|..||+|+||+..+.
T Consensus        71 ivG~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~Gf~~~~~  150 (171)
T 2b5g_A           71 IVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSS  150 (171)
T ss_dssp             EEEEEEEEEEEETTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTCHHHHHHHHTTTCEEHHH
T ss_pred             eEEEEEEEeecCCcCCceEEEEEEEECHhhhCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccCHHHHHHHHHcCCEeccc
Confidence            89999887654  233568899999999999999999999999999999999999887753   5999999999998876


Q ss_pred             c
Q 009150          219 V  219 (542)
Q Consensus       219 ~  219 (542)
                      .
T Consensus       151 ~  151 (171)
T 2b5g_A          151 E  151 (171)
T ss_dssp             H
T ss_pred             c
Confidence            4

>1nsl_A Probable acetyltransferase; structural genomics, hexamer, alpha-beta, PSI, protein struc initiative, midwest center for structural genomics; 2.70A {Bacillus subtilis} SCOP: d.108.1.1

Probab=98.98  E-value=1.5e-09  Score=95.94  Aligned_cols=95  Identities=8%  Similarity=0.035  Sum_probs=74.0

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRL-QSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~l-k~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      +|++||.+.+.........++|.. +|+|+|||+|||+.|+..+.+++ +..|+..+.+.+..   .|..||+|+||+..
T Consensus        76 ~~~~vG~~~~~~~~~~~~~~~i~~-~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~  154 (184)
T 1nsl_A           76 DGSLCGMISLHNLDQVNRKAEIGY-WIAKEFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERIGFLEE  154 (184)
T ss_dssp             TTEEEEEEEEEEEETTTTEEEEEE-EECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEE
T ss_pred             CCEEEEEEEEEecccccCeEEEEE-EEChhhcCCCHHHHHHHHHHHHHHHhcCcEEEEEEEecCCHHHHHHHHHcCCEEE
Confidence            579999998876654556777874 99999999999999999999999 46899999887765   38999999999999


Q ss_pred             ccccccccCCCCCCCceeEEE
Q 009150          217 TAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       217 ~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +.........+. -....+|.
T Consensus       155 ~~~~~~~~~~g~-~~d~~~~~  174 (184)
T 1nsl_A          155 GKARDGLYVNGM-HHDLVYYS  174 (184)
T ss_dssp             EEEEEEEEETTE-EEEEEEEE
T ss_pred             EEeehhhhhCCC-eEEEEEEE
Confidence            887554333332 22244555

>3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus cereus}

Probab=98.97  E-value=3.8e-10  Score=96.54  Aligned_cols=79  Identities=14%  Similarity=0.088  Sum_probs=64.7

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCcccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADTA  218 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~~  218 (542)
                      ++|++||.+.+...+.+  .++|..++|+|+|||+|||+.|+.++.+++++.|+. +.+...+ .|..||+|+||+..+.
T Consensus        47 ~~~~~vG~~~~~~~~~~--~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~~i~-~~~~~~n~~a~~~y~k~Gf~~~~~  123 (143)
T 3bln_A           47 EDNSISGFLTYDTNFFD--CTFLSLIIVSPTKRRRGYASSLLSYMLSHSPTQKIF-SSTNESNESMQKVFNANGFIRSGI  123 (143)
T ss_dssp             ETTEEEEEEEEEEEETT--EEEEEEEEECTTCCSSCHHHHHHHHHHHHCSSSEEE-EEEETTCHHHHHHHHHTTCEEEEE
T ss_pred             eCCeEEEEEEEEecCCC--ceEEEEEEECHHHcCCChHHHHHHHHHHHHhhCCeE-EEEcccCHHHHHHHHHCCCeEeeE
Confidence            36799999988776444  788999999999999999999999999999998743 2333333 5999999999999887


Q ss_pred             ccc
Q 009150          219 VSL  221 (542)
Q Consensus       219 ~~~  221 (542)
                      ...
T Consensus       124 ~~~  126 (143)
T 3bln_A          124 VEN  126 (143)
T ss_dssp             ECS
T ss_pred             Eec
Confidence            643

>2qec_A Histone acetyltransferase HPA2 and related acetyltransferases; NP_600742.1, acetyltransferase (GNAT) family; 1.90A {Corynebacterium glutamicum atcc 13032}

Probab=98.97  E-value=1.1e-09  Score=97.74  Aligned_cols=62  Identities=15%  Similarity=0.042  Sum_probs=54.2

Q ss_pred             CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCcccccccc
Q 009150          156 DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADTAVS  220 (542)
Q Consensus       156 d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~~~~  220 (542)
                      ....++|..++|+|+|||+|||+.|++++++++++.   .+.+.+.+ .|..||+|+||+..+...
T Consensus       122 ~~~~~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~---~~~v~~~n~~a~~~y~k~GF~~~~~~~  184 (204)
T 2qec_A          122 KFPHWYLYTVATSSSARGTGVGSALLNHGIARAGDE---AIYLEATSTRAAQLYNRLGFVPLGYIP  184 (204)
T ss_dssp             SSCCEEEEEEEECGGGTTSSHHHHHHHHHHHHHTTS---CEEEEESSHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCeEEEEEEEEChhhcCCCHHHHHHHHHHHHhhhC---CeEEEecCccchHHHHhcCCeEeEEEE
Confidence            345788999999999999999999999999999987   66666665 699999999999988754

>2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A

Probab=98.97  E-value=1.8e-09  Score=96.29  Aligned_cols=96  Identities=14%  Similarity=0.057  Sum_probs=72.0

Q ss_pred             CCCcEEEEEEeeeccCCC---ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVPADT---QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~---~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      +++++||.+.+.......   ..+++ .++|+|+|||||||+.|++++++++++.|+..|.+.+..   .|..||+|+||
T Consensus        61 ~~~~~vG~~~~~~~~~~~~~~~~~~~-~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF  139 (172)
T 2j8m_A           61 AAGEVLGYASYGDWRPFEGFRGTVEH-SVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGF  139 (172)
T ss_dssp             TTCCEEEEEEEEESSSSGGGTTEEEE-EEEECTTCTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred             CCCeEEEEEEEecccCCcccCceEEE-EEEEChhhcCCCHHHHHHHHHHHHHHHCCccEEEEEEcCCCHHHHHHHHHCCC
Confidence            467999999877653211   24443 689999999999999999999999999999999887643   49999999999


Q ss_pred             cccccccccccCCCCCCCceeEEE
Q 009150          214 SADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       214 ~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +..+...... |..|......+|.
T Consensus       140 ~~~g~~~~~~-~~~g~~~d~~~m~  162 (172)
T 2j8m_A          140 EISGQMPQVG-QKFGRWLDLTFMQ  162 (172)
T ss_dssp             EEEEEEEEEE-EETTEEEEEEEEE
T ss_pred             EEEeeccccc-eecCEEeEHHHHH
Confidence            9998764322 2222123356666

>3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}

Probab=98.96  E-value=1.2e-09  Score=105.06  Aligned_cols=78  Identities=15%  Similarity=0.164  Sum_probs=68.4

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++|++||.+.+...+ +...++|..++|+++|||+|||+.|++++++++++.| .++.+.+..   .|..||+|+||+..
T Consensus       139 ~~g~lVG~~~~~~~~-~~~~~~i~~l~V~p~~Rg~GiG~~Ll~~~~~~a~~~g-~~i~l~v~~~N~~a~~~Y~k~GF~~~  216 (228)
T 3ec4_A          139 IDGRLAAMAGERMRP-APNLAEVSGVCTWPEYRGRGLAARLIRKVIAGMAARG-EVPYLHSYASNASAIRLYESLGFRAR  216 (228)
T ss_dssp             ETTEEEEEEEECCCS-STTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTT-CEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             ECCEEEEEEEEEEec-CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcC-CeEEEEEeCCCHHHHHHHHHCCCEEE
Confidence            468999999887763 3358999999999999999999999999999999999 888887654   38999999999998


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       217 ~~~  219 (228)
T 3ec4_A          217 RAM  219 (228)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            765

>2k5t_A Uncharacterized protein YHHK; N-acetyl transferase, COA, bound ligand, coenzyme A, structural genomics, PSI-2, protein structure initiative; HET: COA; NMR {Escherichia coli K12}

Probab=98.95  E-value=5.7e-10  Score=96.62  Aligned_cols=75  Identities=12%  Similarity=0.156  Sum_probs=60.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-----cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-----ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-----~A~~Fw~KqGF~  214 (542)
                      +++++||.+.+....   ..++|..++|+|+|||+|||++||+++++.++.  +..+.+.+..     .|..||+|+||+
T Consensus        44 ~~~~ivG~~~~~~~~---~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~--~~~~~l~~~~~~~~~~a~~fY~~~GF~  118 (128)
T 2k5t_A           44 FNERLLAAVRVTLSG---TEGALDSLRVREVTRRRGVGQYLLEEVLRNNPG--VSCWWMADAGVEDRGVMTAFMQALGFT  118 (128)
T ss_dssp             ETTEEEEEEEEEEET---TEEEEEEEEECTTCSSSSHHHHHHHHHHHHSCS--CCEEEECCTTCSTHHHHHHHHHHHTCE
T ss_pred             ECCeEEEEEEEEEcC---CcEEEEEEEECHHHcCCCHHHHHHHHHHHHhhh--CCEEEEeccCccccHHHHHHHHHcCCC
Confidence            367999998776543   358999999999999999999999999999864  5555553221     478999999999


Q ss_pred             ccccc
Q 009150          215 ADTAV  219 (542)
Q Consensus       215 ~~~~~  219 (542)
                      ..+..
T Consensus       119 ~~~~~  123 (128)
T 2k5t_A          119 TQQGG  123 (128)
T ss_dssp             ECSSS
T ss_pred             ccccc
Confidence            87753

>3juw_A Probable GNAT-family acetyltransferase; structural genomics, APC60242, acetyltransferas protein structure initiative; HET: MSE; 2.11A {Bordetella pertussis}

Probab=98.95  E-value=1.8e-09  Score=95.12  Aligned_cols=79  Identities=14%  Similarity=0.052  Sum_probs=66.4

Q ss_pred             CCCcEEEEEEeeecc-----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccc---cchhhhhh
Q 009150          140 DDDVVVAAITYQIVP-----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDK---ESEGFWHK  210 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~K  210 (542)
                      ++|++||.+.+....     .....++|. ++|+|+|||+|||+.|+..+++++++. |+..|.+.+..   .|..||+|
T Consensus        74 ~~g~~vG~~~~~~~~~~~~~~~~~~~~~~-~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k  152 (175)
T 3juw_A           74 VSGEMRGEAGFQFRRRGFGPGFDNHPEAA-WAVASAHQGRGLAAEAMQALLAHHDRSSGRQRVVALIARSNLPSLRLAER  152 (175)
T ss_dssp             TTCCEEEEEEEECCCCSSCTTTTTSCEEE-EEECGGGTTSSHHHHHHHHHHHHHHHHHTSCCEEEEEETTCHHHHHHHHH
T ss_pred             CCCcEEEEeeeEEeeccccCCCCCCceEE-EEECHHHhCCCHHHHHHHHHHHHHHhCCCCceEEEEECCCChhHHHHHHH
Confidence            578999999888743     222466665 799999999999999999999999985 99999877766   49999999


Q ss_pred             cCccccccc
Q 009150          211 QDTSADTAV  219 (542)
Q Consensus       211 qGF~~~~~~  219 (542)
                      +||+..+..
T Consensus       153 ~GF~~~~~~  161 (175)
T 3juw_A          153 LGFRGYSDV  161 (175)
T ss_dssp             TTCEEEEEE
T ss_pred             cCCeEecce
Confidence            999998874

>4fd7_A Putative arylalkylamine N-acetyltransferase 7; GNAT, COA binding; 1.80A {Aedes aegypti}

Probab=98.93  E-value=3.3e-09  Score=101.78  Aligned_cols=98  Identities=12%  Similarity=0.142  Sum_probs=76.9

Q ss_pred             CCCcEEEEEEeeeccC----------------------------------CCceeEeeeeeeccCccccChHHHHHHHHH
Q 009150          140 DDDVVVAAITYQIVPA----------------------------------DTQYAEVPLAAVSSIYQHKGVGRLLYLELR  185 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~----------------------------------d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~  185 (542)
                      ++|+|||++.......                                  ...+.+|..++|+|+|||+|||+.|+++++
T Consensus        94 ~~g~IVG~a~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~p~~rg~Gig~~L~~~~~  173 (238)
T 4fd7_A           94 GSDEIVGVNILDVASRSDKDNAQFNSAIFQAIYDTIEYVSHQANIFDRYNVDHYLNAMGLSVDPKYRGRGIATEILRARI  173 (238)
T ss_dssp             TCCSEEEEEEEEEEETTCCCCCCCSCHHHHHHHHHHHHHHHHHTHHHHHTCSEEEEEEEEEECGGGTTSSHHHHHHHTHH
T ss_pred             CCCcEEEEEEecccCcccccccccCCHHHHHHHHHHHHHHhhCcHHHhcCCCcEEEEEEEEECHHHcCCCHHHHHHHHHH
Confidence            4679999987776642                                  235677888999999999999999999999


Q ss_pred             HHHHHcCCcEEEEEccc-cchhhhhhcCccccccc--------cccccCCCCCCCceeEEE
Q 009150          186 KRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADTAV--------SLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       186 ~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~~~--------~~~~~~~~~~c~ea~lm~  237 (542)
                      +.+++.|+..+.+...+ .|..||+|+||+..+.+        .....||+.|-....+|.
T Consensus       174 ~~~~~~g~~~~~~~~~n~~a~~~y~k~GF~~~~~~~~~~~~~~~g~~~f~~~~~~~~~~m~  234 (238)
T 4fd7_A          174 PLCRAVGLKLSATCFTGPNSQTAATRVGFQEDFTITYGELARVDQRFNYPGIEENFCKYMS  234 (238)
T ss_dssp             HHHHHHTCCEEEEEECSHHHHHHHHHHTCEEEEEEEHHHHHHHCTTCCCTTCTTSEEEEEE
T ss_pred             HHHHHcCCcEEEEEcCCHHHHHHHHHCCCEEEEEEEehheeccCCeEecCCCCcceEEEEE
Confidence            99999999977664444 59999999999999876        223566665444455554

>2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi}

Probab=98.93  E-value=2.7e-09  Score=97.14  Aligned_cols=96  Identities=14%  Similarity=0.068  Sum_probs=73.5

Q ss_pred             CCCcEEEEEEeeeccCC---CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVPAD---TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d---~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      ++|+|||.+.+......   ...+++ .++|+|+|||||||+.|++.+++++++.|+.+|.+.+..   .|..||+|+||
T Consensus        69 ~~g~iiG~~~~~~~~~~~~~~~~~e~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~GF  147 (182)
T 2jlm_A           69 EVGQLLGFASWGSFRAFPAYKYTVEH-SVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGF  147 (182)
T ss_dssp             TTSCEEEEEEEEESSSSGGGTTEEEE-EEEECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred             cCCcEEEEEEecccCCcccccceeEE-EEEEChhhcCCCHHHHHHHHHHHHHHHCCceEEEEEEeCCCHHHHHHHHHCCC
Confidence            46799999887754321   134544 589999999999999999999999999999999887643   49999999999


Q ss_pred             cccccccccccCCCCCCCceeEEE
Q 009150          214 SADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       214 ~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +..+...... |.+|......+|.
T Consensus       148 ~~~g~~~~~~-~~~g~~~d~~~m~  170 (182)
T 2jlm_A          148 IHSGTIQQAG-FKFGRWLDAAFYQ  170 (182)
T ss_dssp             EEEEEEEEEE-EETTEEEEEEEEE
T ss_pred             cEEEEeeeee-eeCCEEEEeeeeh
Confidence            9998764432 2233344567777

>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}

Probab=98.93  E-value=2e-09  Score=94.57  Aligned_cols=77  Identities=13%  Similarity=0.100  Sum_probs=66.0

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeecc-CccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSS-IYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~-~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqGF~~  215 (542)
                      .+|++||.+.+.......  ++| .++|.+ +|||+|||+.|+..++++++..|+..|.+.+...   |..||+|+||+.
T Consensus        73 ~~~~~iG~~~~~~~~~~~--~~i-~~~v~~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~  149 (164)
T 3eo4_A           73 NTIRKVGSVNVSQLNTDN--PEI-GILIGEFFLWGKHIGRHSVSLVLKWLKNIGYKKAHARILENNIRSIKLFESLGFKK  149 (164)
T ss_dssp             TEEEEEEEEEEECTTSSS--CEE-EEEECSTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred             CCCcEEEEEEEEecCCCc--EEE-EEEEcCHHHcCccHHHHHHHHHHHHHHhCCCcEEEEEeCCCCHHHHHHHHHCCCEE
Confidence            577999999887655443  767 567887 9999999999999999999999999998887763   999999999999


Q ss_pred             cccc
Q 009150          216 DTAV  219 (542)
Q Consensus       216 ~~~~  219 (542)
                      .+..
T Consensus       150 ~g~~  153 (164)
T 3eo4_A          150 TKKG  153 (164)
T ss_dssp             EEEC
T ss_pred             Eeee
Confidence            8865

>2fck_A Ribosomal-protein-serine acetyltransferase, putat; ribosomal-protein structural genomics, PSI, protein structure initiative; HET: MSE; 1.70A {Vibrio cholerae o1 biovar eltor} SCOP: d.108.1.1

Probab=98.93  E-value=1.8e-09  Score=95.17  Aligned_cols=82  Identities=11%  Similarity=0.066  Sum_probs=69.5

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      ++|++||.+.+.....+...++|. ++|+|+|||+|||+.|+..+++++++. |+..+.+.+..   .|..||+|+||+.
T Consensus        79 ~~~~~vG~~~~~~~~~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~  157 (181)
T 2fck_A           79 QTQTLVGMVAINEFYHTFNMASLG-YWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANR  157 (181)
T ss_dssp             TTCCEEEEEEEEEEEGGGTEEEEE-EEECHHHHTTTHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEE
T ss_pred             CCCcEEEEEEEEEecccCCeEEEE-EEEChhhcCCChHHHHHHHHHHHHHHhcCceEEEEEEccCCHHHHHHHHHcCCEE
Confidence            478999999887655445678784 699999999999999999999999994 99999888755   3899999999999


Q ss_pred             ccccccc
Q 009150          216 DTAVSLK  222 (542)
Q Consensus       216 ~~~~~~~  222 (542)
                      .+.....
T Consensus       158 ~~~~~~~  164 (181)
T 2fck_A          158 EQLAPNR  164 (181)
T ss_dssp             EEEEEEE
T ss_pred             EEEEehe
Confidence            9877544

>3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron}

Probab=98.91  E-value=1.3e-09  Score=98.64  Aligned_cols=116  Identities=16%  Similarity=0.165  Sum_probs=76.4

Q ss_pred             hHHHHHHHHhhccCCchhhhhcCccccceeeeec-ccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeecc
Q 009150           91 YLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVL-NGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSS  169 (542)
Q Consensus        91 ~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~-~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~  169 (542)
                      .+.++.++|....|....     ...+.+.+.+- +..+..++..     +++++||.+.+....   ..++|..++|+|
T Consensus        17 ~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~-----~~~~ivG~~~~~~~~---~~~~i~~l~V~p   83 (181)
T 3ey5_A           17 HYKFMEELLVESFPPEEY-----RELEHLREYTDRIGNFHNNIIF-----DDDLPIGFITYWDFD---EFYYVEHFATNP   83 (181)
T ss_dssp             HHHHHHHHHHHHSCGGGS-----CCHHHHHHHHHHCTTEEEEEEE-----ETTEEEEEEEEEECS---SCEEEEEEEECG
T ss_pred             HHHHHHHHHHHhCCcccc-----chHHHHHHHhccCCCeEEEEEE-----ECCEEEEEEEEEEcC---CeEEEEEEEEch
Confidence            445566667666655431     01112333322 3344433333     467999998877553   479999999999


Q ss_pred             CccccChHHHHHHHHHHHHHHcCCcEEEEEcc---ccchhhhhhcCccccccc
Q 009150          170 IYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD---KESEGFWHKQDTSADTAV  219 (542)
Q Consensus       170 ~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~---~~A~~Fw~KqGF~~~~~~  219 (542)
                      +|||+|||++|++++++.++..++..+...++   ..|..||+|+||+..+..
T Consensus        84 ~~rg~GiG~~Ll~~~~~~a~~~~~l~v~~~~~~~n~~a~~fY~k~GF~~~~~~  136 (181)
T 3ey5_A           84 ALRNGGYGKRTLEHLCEFLKRPIVLEVERPVEEMAKRRINFYQRHGFTLWEKD  136 (181)
T ss_dssp             GGTTSSHHHHHHHHHHHHCCSCEEEEECCTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             hhcCCCHHHHHHHHHHHhhhhCeEEEEeCCCccchHHHHHHHHHCCCEECCcc
Confidence            99999999999999999998333323222111   137899999999999933

>3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii}

Probab=98.90  E-value=2e-09  Score=105.79  Aligned_cols=76  Identities=18%  Similarity=0.156  Sum_probs=69.6

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      ++|++||.+.+....   ..++|..++|+|+|||+|||+.|+++++++++ .|++.+.+.++..+..||+|+||+.....
T Consensus        70 ~~g~~vG~~~~~~~~---~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~~~-~~~~~~~l~~n~~a~~~y~k~Gf~~~~~~  145 (288)
T 3ddd_A           70 LKDEPVGMGCIFFYN---KQAWIGLMGVKKAYQRRGIGTEVFRRLLEIGR-RKVDTIRLDASSQGYGLYKKFKFVDEYRT  145 (288)
T ss_dssp             ETTEEEEEEEEEECS---SEEEEEEEEECGGGCSSSHHHHHHHHHHHHHH-HHCSEEEEEECTTTHHHHHHTTCEEEEEE
T ss_pred             ECCEEEEEEEEEEEC---CEEEEEEEEECHHHcCCCHHHHHHHHHHHHHH-cCCcEEEEEeCHHHHHHHHHCCCEEeceE
Confidence            468999998776654   58999999999999999999999999999999 99999999998889999999999998876

>3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans}

Probab=98.90  E-value=2.1e-09  Score=97.49  Aligned_cols=96  Identities=17%  Similarity=0.167  Sum_probs=73.8

Q ss_pred             CCCcEEEEEEeeecc--CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVP--ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~--~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      ++|++||.+.+...+  ......+|..++|+|+|||+|||+.|+.++++++++. +..+.+.+..   .|..||+|+||+
T Consensus        88 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~~V~p~~rg~Gig~~ll~~~~~~a~~~-~~~i~l~v~~~N~~a~~~y~k~GF~  166 (197)
T 3ld2_A           88 IKDKIVGVLDYSSLYPFPSGQHIVTFGIAVAEKERRKGIGRALVQIFLNEVKSD-YQKVLIHVLSSNQEAVLFYKKLGFD  166 (197)
T ss_dssp             ESSCEEEEEEEEESCSSGGGTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHTTT-CSEEEEEEETTCHHHHHHHHHTTCE
T ss_pred             eCCCEEEEEEEEeccCCCCCCeEEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHH-HHeEEEEeeCCCHHHHHHHHHCCCE
Confidence            467999999887753  1234566889999999999999999999999999999 9999877544   389999999999


Q ss_pred             ccccccccccCCCCCCCceeEEE
Q 009150          215 ADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       215 ~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      ..+.........+ ......+|.
T Consensus       167 ~~~~~~~~~~~~g-~~~~~~~~~  188 (197)
T 3ld2_A          167 LEARLTKQFFLKG-QYVDDLIYS  188 (197)
T ss_dssp             EEEEEEEEEEETT-EEEEEEEEE
T ss_pred             EeeeccceEEECC-eecceeeee
Confidence            9998744322333 122355555

>2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A*

Probab=98.89  E-value=7.9e-09  Score=101.58  Aligned_cols=79  Identities=16%  Similarity=0.143  Sum_probs=70.0

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc----------cchhhhh
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK----------ESEGFWH  209 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~----------~A~~Fw~  209 (542)
                      ++|++||.+.+... .+...++|..++|+|+|||+|||+.|+.++++++++.|+..+.+.+..          .+..||+
T Consensus        66 ~~g~~vG~~~~~~~-~~~~~~~i~~~~v~p~~r~~Gig~~Ll~~~~~~~~~~g~~~i~~~~~~~n~~g~~~~~~~~~~~~  144 (339)
T 2wpx_A           66 SGGRVVGALRLALP-DGAPTARVDQLLVHPGRRRRGIGRALWAHARELARKHDRTTLTATVVESLPSGPAQDPGPAAFAA  144 (339)
T ss_dssp             ETTEEEEEEEEEEE-TTCSEEEEEEEEECTTSCSSSHHHHHHHHHHHHHHHTTCSEEEEEEEECCSSSCCCCCHHHHHHH
T ss_pred             ECCEEEEEEEEEec-CCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEeecCCCCcccccchHHHHHH
Confidence            46899999988776 344689999999999999999999999999999999999999887754          5899999


Q ss_pred             hcCccccccc
Q 009150          210 KQDTSADTAV  219 (542)
Q Consensus       210 KqGF~~~~~~  219 (542)
                      |+||......
T Consensus       145 ~~Gf~~~~~~  154 (339)
T 2wpx_A          145 AMGAHRSDIP  154 (339)
T ss_dssp             HTTCEECSSC
T ss_pred             HCCCeeeeee
Confidence            9999988765

>3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp}

Probab=98.88  E-value=4.5e-09  Score=94.41  Aligned_cols=78  Identities=14%  Similarity=0.087  Sum_probs=65.8

Q ss_pred             CCCcEEEEEEeeecc-----------CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cch
Q 009150          140 DDDVVVAAITYQIVP-----------ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESE  205 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-----------~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~  205 (542)
                      ++|+|||.+.+...+           .+..+++|..++|+|+|  ||||+.|++++++++++.|+..|.+.+..   .|.
T Consensus        75 ~~~~ivG~~~~~~~~~~~~~~~~w~~~~~~~~~i~~l~V~p~~--~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~  152 (188)
T 3h4q_A           75 ENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEY--KGAATELFNYVIDVVKARGAEVILTDTFALNKPAQ  152 (188)
T ss_dssp             ETTEEEEEEEEESCCCGGGGGSCCSSCCTTCEEEEEEECCSSC--TTHHHHHHHHHHHHHHHTTCCEEEEEGGGSCGGGT
T ss_pred             ECCEEEEEEEEEccCcccccccccccCCCCeEEEEEEEECCcc--CcHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHH
Confidence            468999999887642           23467889999999999  99999999999999999999999998544   599


Q ss_pred             hhhhhcCccccccc
Q 009150          206 GFWHKQDTSADTAV  219 (542)
Q Consensus       206 ~Fw~KqGF~~~~~~  219 (542)
                      .||+|+||+..+..
T Consensus       153 ~~y~k~GF~~~~~~  166 (188)
T 3h4q_A          153 GLFAKFGFHKVGEQ  166 (188)
T ss_dssp             HHHHHTTCEEC---
T ss_pred             HHHHHCCCeEeceE
Confidence            99999999999876

>3tcv_A GCN5-related N-acetyltransferase; GRAM negative coccobacillus, brucellosis, acyl CO-A, arylami transferase; 1.75A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}

Probab=98.88  E-value=5.8e-09  Score=100.90  Aligned_cols=126  Identities=7%  Similarity=0.001  Sum_probs=92.4

Q ss_pred             cccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCC
Q 009150          115 RSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGI  193 (542)
Q Consensus       115 ~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI  193 (542)
                      ...|+.+..-+.......+..   .++|++||.+.+.........++|..+.|+++|||+|||+.++..+++++.+ .|+
T Consensus        85 ~~~~~~~~~~~~~~~~~~i~~---~~~g~~IG~~~l~~~~~~~~~~eig~~~v~p~~rgkGig~~ll~~ll~~a~~~~g~  161 (246)
T 3tcv_A           85 FEPWLDKASKSDDPLFFAVID---KASGKVAGRQALMRIDPANGVIEIGSIYWGPLISRRPAATEAQFLFMQYVFDVLGY  161 (246)
T ss_dssp             HHHHHHHHHHCSSSEEEEEEE---TTTCSEEEEEEEEEEETTTTEEEEEEEEECTTTTTSHHHHHHHHHHHHHHHHTSCC
T ss_pred             HHHHHHHHhcCCCceEEEEEE---CCCCCEEEEEEEeecccccCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHhcCc
Confidence            345566553333333333332   2478999999887555456789999999999999999999999999999987 699


Q ss_pred             cEEEEEcccc---chhhhhhcCccccccccccccCCCCCCCceeEEE-Eecccch
Q 009150          194 RTIFCWGDKE---SEGFWHKQDTSADTAVSLKFCFPVKPCEKSSLVT-VNRSLEA  244 (542)
Q Consensus       194 ~~I~l~a~~~---A~~Fw~KqGF~~~~~~~~~~~~~~~~c~ea~lm~-l~~~~~~  244 (542)
                      .+|.+.+...   |..||+|+||+..+..+....+.+. .....+|. +..+..+
T Consensus       162 ~~i~l~v~~~N~~s~~lyek~GF~~~G~~r~~~~~~G~-~~D~~~~~ll~~ew~~  215 (246)
T 3tcv_A          162 RRYEWECHNENGPSRRAAERFGFRFEGIFRQHMVVKGR-NRDTAWFSVLDSEWPA  215 (246)
T ss_dssp             SEEEEEEETTCHHHHHHHHHHTCEEEEEEEEEEEETTE-EEEEEEEEEEGGGHHH
T ss_pred             EEEEEEccCCCHHHHHHHHHCCCEEEEEEEeeEEECCE-EEEEEEEEeEHHHHHH
Confidence            9998777653   9999999999999988554334442 33456666 7666654

>2pc1_A Acetyltransferase, GNAT family; NP_688560.1, structural genom joint center for structural genomics, JCSG; HET: MSE; 1.28A {Streptococcus agalactiae 2603V}

Probab=98.88  E-value=3.6e-09  Score=96.54  Aligned_cols=77  Identities=12%  Similarity=0.111  Sum_probs=66.7

Q ss_pred             CCCcEEEEEEeeeccCC--------------CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc--
Q 009150          140 DDDVVVAAITYQIVPAD--------------TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE--  203 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d--------------~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~--  203 (542)
                      ++|++||.+.+......              ..+++|..++|+|+|||+|||+.|++++++   ..|+..+.+.+...  
T Consensus        78 ~~~~ivG~~~~~~~~~~~~~~~~~g~w~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~---~~g~~~i~l~v~~~N~  154 (201)
T 2pc1_A           78 EDGMLATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIE---GHKGPDFRCDTHEKNV  154 (201)
T ss_dssp             ETTEEEEEEEEEEECCGGGGGCBSSCCSSCCSCEEEEEEEEECSTTCSSHHHHHHHHHHHH---HSCCSEEEEEECTTCH
T ss_pred             ECCeEEEEEEEecCCchhhccccccccccCCCcEEEEEEEEECHHHhCCCHHHHHHHHHHH---hCCCceEEEEEecCCH
Confidence            36799999988765321              257889999999999999999999999999   88999998888764  


Q ss_pred             -chhhhhhcCccccccc
Q 009150          204 -SEGFWHKQDTSADTAV  219 (542)
Q Consensus       204 -A~~Fw~KqGF~~~~~~  219 (542)
                       |..||+|+||+..+..
T Consensus       155 ~a~~~y~k~GF~~~~~~  171 (201)
T 2pc1_A          155 TMQHILNKLGYQYCGKV  171 (201)
T ss_dssp             HHHHHHHHTTCEEEEEE
T ss_pred             HHHHHHHHCCCEEEEEE
Confidence             9999999999998876

>2vi7_A Acetyltransferase PA1377; GNAT, GCN5 family, N-acetyltransferase, hypothetical protein; 2.25A {Pseudomonas aeruginosa}

Probab=98.87  E-value=2.5e-09  Score=96.35  Aligned_cols=96  Identities=14%  Similarity=0.090  Sum_probs=72.8

Q ss_pred             CCCcEEEEEEeeeccC--CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccc---cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~--d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      ++|++||.+.+.....  ....++| .++|+|+|||||||+.|++++++++++. |+..|.+.+..   .|..||+|+||
T Consensus        65 ~~~~~vG~~~~~~~~~~~~~~~~~~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~Yek~GF  143 (177)
T 2vi7_A           65 HQGDVIGSASLEQHPRIRRSHSGSI-GMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGF  143 (177)
T ss_dssp             ETTEEEEEEEEEECSSGGGTTEEEC-TTCCEESSTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHTTC
T ss_pred             ECCEEEEEEEEecCCccccceEEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCeEEEEEEEECCCHHHHHHHHHCCC
Confidence            3679999998876431  2346767 6899999999999999999999999987 59999887654   49999999999


Q ss_pred             cccccccccccCCCCCCCceeEEE
Q 009150          214 SADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       214 ~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +..+..... .+.+|....+.+|.
T Consensus       144 ~~~g~~~~~-~~~~g~~~d~~~~~  166 (177)
T 2vi7_A          144 ETEGEMRDY-AVRDGRFVDVYSMA  166 (177)
T ss_dssp             EEEEEEEEE-EEETTEEEEEEEEE
T ss_pred             EEEeeeccc-EEECCEEEEEEEee
Confidence            998865432 23333223356666

>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*

Probab=98.87  E-value=4.8e-09  Score=111.30  Aligned_cols=78  Identities=15%  Similarity=0.296  Sum_probs=70.2

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      +++++||++.+...+ +..+++|..++|+|+|||+|||++|++++++++++.|+..+++. +..|..||+|+||+..+..
T Consensus       353 ~~g~iVG~~~~~~~~-~~~~~~I~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~-N~~a~~fY~k~GF~~~~~~  430 (456)
T 3d2m_A          353 HDGNLYGCAALKTFA-EADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFAL-STNTGEWFAERGFQTASED  430 (456)
T ss_dssp             ETTEEEEEEEEEECS-STTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEE-ESSCHHHHHTTTCEEECGG
T ss_pred             ECCEEEEEEEEEecC-CCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEE-cHHHHHHHHHCCCEEeCcc
Confidence            478999999888775 34689999999999999999999999999999999999999887 5579999999999988764

>3f5b_A Aminoglycoside N(6')acetyltransferase; APC60744, legionella pneumophila subsp. pneumophila, structural genomics, PSI-2; HET: MSE; 2.00A {Legionella pneumophila subsp}

Probab=98.86  E-value=2.7e-09  Score=94.43  Aligned_cols=79  Identities=11%  Similarity=0.057  Sum_probs=67.9

Q ss_pred             CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcC
Q 009150          140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQD  212 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqG  212 (542)
                      .++++||.+.+....    .....++|..+.|+|+|||+|||+.|++++.+++.. |+..+.+.+..   .|..||+|+|
T Consensus        71 ~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~-~~~~i~l~v~~~N~~a~~~y~k~G  149 (182)
T 3f5b_A           71 DNEIPFAYLITSEIEKSEEYPDGAVTLDLFICRLDYIGKGLSVQMIHEFILSQFS-DTKIVLINPEISNERAVHVYKKAG  149 (182)
T ss_dssp             ETTEEEEEEEEEEECSCSSCTTCEEEEEEEECSGGGCCHHHHHHHHHHHHHHHCT-TCSEEEECCBTTCHHHHHHHHHHT
T ss_pred             eCCCcEEEEEEeccccccccCCCceEEEEEEEChhhcCCchHHHHHHHHHHHhhC-CCCEEEEecCcCCHHHHHHHHHCC
Confidence            467999998876653    233578899999999999999999999999999954 99999888776   3999999999


Q ss_pred             ccccccc
Q 009150          213 TSADTAV  219 (542)
Q Consensus       213 F~~~~~~  219 (542)
                      |+..+..
T Consensus       150 F~~~~~~  156 (182)
T 3f5b_A          150 FEIIGEF  156 (182)
T ss_dssp             CEEEEEE
T ss_pred             CEEEeEE
Confidence            9999876

>2pr1_A Uncharacterized N-acetyltransferase YLBP; YIBP protein, coenzyme A, structural GE PSI-2, protein structure initiative; HET: SUC COA; 3.20A {Bacillus subtilis}

Probab=98.86  E-value=9.8e-09  Score=92.39  Aligned_cols=75  Identities=24%  Similarity=0.238  Sum_probs=60.0

Q ss_pred             CCcEEEEEEeeeccC--------CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcC
Q 009150          141 DDVVVAAITYQIVPA--------DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQD  212 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~--------d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqG  212 (542)
                      ++.++|.+.+.....        ...+++|..++|+|+|||+|||+.|++++++.    |+ .+.+.+.+.|..||+|+|
T Consensus        56 ~~~~~g~~~~~~~~~~i~G~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~----g~-~l~~~~~n~a~~fY~k~G  130 (163)
T 2pr1_A           56 GDKLVARMSLYQVNGKSNPYFDNRQDYLELWKLEVLPGYQNRGYGRALVEFAKSF----KM-PIRTNPRMKSAEFWNKMN  130 (163)
T ss_dssp             TTEEEEEEEEEEECTTSSCCSGGGCCEEEEEEEEECTTSTTSSHHHHHHHHHHTT----CS-CEEECCCGGGHHHHHHTT
T ss_pred             CCceeEEEEEEecCCeeeeEEecCCCEEEEEEEEECHHHcCCCHHHHHHHHHHHc----Cc-EEEEecCchHHHHHHHcC
Confidence            457777766554421        13488999999999999999999999999983    65 477777778999999999


Q ss_pred             cccccccc
Q 009150          213 TSADTAVS  220 (542)
Q Consensus       213 F~~~~~~~  220 (542)
                      |+..+...
T Consensus       131 F~~~~~~~  138 (163)
T 2pr1_A          131 FKTVKYDM  138 (163)
T ss_dssp             CEECCCCH
T ss_pred             CEEeeeEe
Confidence            99888753

>2fsr_A Acetyltransferase; alpha-beta-sandwich, structural genomics, PSI, protein struc initiative, midwest center for structural genomics; HET: PEG; 1.52A {Agrobacterium tumefaciens str} SCOP: d.108.1.1

Probab=98.82  E-value=8.5e-09  Score=94.86  Aligned_cols=78  Identities=12%  Similarity=0.057  Sum_probs=67.0

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEcccc---chhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDKE---SEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~~---A~~Fw~KqGF~~  215 (542)
                      ++|++||.+.+...+ +...++| .++|+++|||+|||+.|++.+++++++ .|+..|.+.+...   |..||+|+||+.
T Consensus        94 ~~g~~iG~~~~~~~~-~~~~~~i-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~  171 (195)
T 2fsr_A           94 ETGECIGQIGINHGP-LFPEKEL-GWLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAVAERIGGTL  171 (195)
T ss_dssp             TTTEEEEEEEEECST-TCSSCEE-EEEECTTCTTSSHHHHHHHHHHHHHHHHSCCSCEEEEECTTCHHHHHHHHHTTCEE
T ss_pred             CCCCEEEEEeeEecC-CCCeEEE-EEEEChhHcCCChHHHHHHHHHHHHHhhCCccEEEEEECCCCHHHHHHHHHCCCEE
Confidence            478999999877653 3457778 578999999999999999999999998 7999998887653   899999999999


Q ss_pred             cccc
Q 009150          216 DTAV  219 (542)
Q Consensus       216 ~~~~  219 (542)
                      .+..
T Consensus       172 ~g~~  175 (195)
T 2fsr_A          172 DPLA  175 (195)
T ss_dssp             CTTS
T ss_pred             Eeee
Confidence            8875

>2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A*

Probab=98.81  E-value=1.2e-08  Score=100.23  Aligned_cols=79  Identities=10%  Similarity=0.014  Sum_probs=69.5

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH--cCCcEEEEEccc---cchhhhhhcCccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS--VGIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~--~GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      +|+|||.+.+...+....+++|..++|+|+|||+|||+.|+.++++.+++  .|+..+.+++..   .|..||+|+||+.
T Consensus       245 ~g~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~G~g~~L~~~~~~~~~~~~~g~~~~~l~v~~~N~~a~~ly~~~Gf~~  324 (339)
T 2wpx_A          245 TGALAGYTSVSKTTGNPAYALQGMTVVHREHRGHALGTLLKLANLEYVLRHEPEVRLVETANAEDNHPMIAVNAALGFEP  324 (339)
T ss_dssp             TTEEEEEEEEEECSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHHCTTCCEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred             CCcEEEEEEEEccCCCCceEEEeeEEECHHhcCccHHHHHHHHHHHHHHHhCCCceEEEEecccccHHHHHHHHHcCCEE
Confidence            68999999887665455689999999999999999999999999999999  999999887764   3889999999998


Q ss_pred             cccc
Q 009150          216 DTAV  219 (542)
Q Consensus       216 ~~~~  219 (542)
                      .+..
T Consensus       325 ~~~~  328 (339)
T 2wpx_A          325 YDRW  328 (339)
T ss_dssp             EEEE
T ss_pred             eccE
Confidence            7754

>2g0b_A FEEM; N-acyl transferase, environmental DNA, protein-product compl antibiotic synthase, transferase; HET: NLT; 3.00A {Uncultured bacterium}

Probab=98.81  E-value=1.5e-08  Score=97.13  Aligned_cols=94  Identities=12%  Similarity=-0.007  Sum_probs=78.5

Q ss_pred             CCCcEEEEEEeeeccC-------------------CCceeEeeeeeeccCc--------cccChHHHHHHHHHHHHHHcC
Q 009150          140 DDDVVVAAITYQIVPA-------------------DTQYAEVPLAAVSSIY--------QHKGVGRLLYLELRKRLQSVG  192 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~-------------------d~~~aeI~~~AV~~~~--------QgkGiG~~Lv~~l~~~lk~~G  192 (542)
                      .+|++||.+.+++..+                   +...+||.-+||+++|        ||+|||..|++.+.+.++..|
T Consensus        56 ~~g~ivG~~~l~~~~~~~lp~~~~~~~e~~~~~~~~~~~~EI~RLaV~~~~~~~~~~~~rg~gig~~L~~~a~~~a~~~g  135 (198)
T 2g0b_A           56 NGEVLYGTISIINDGAQGLPMDSIYAVELAAWRGEGKKLAEVVQFAMDHTLYEAVAGAKPSPFEAASLFTMVLTYALETH  135 (198)
T ss_dssp             ETTEEEEEEEEEECBTTBCTTHHHHHHHHHHHHHTTCCEEEEEEEEECTTSSCCCC----CGGGCHHHHHHHHHHHHHTT
T ss_pred             ECCEEEEEEEEEeCCCcCCchhhhchhhhhhhhhcCCcEEEEEEEEEchHHhhcccccccCChHHHHHHHHHHHHHHHcC
Confidence            3689999998887654                   3469999999999999        999999999999999999999


Q ss_pred             CcEEEEEccccchhhhhhcCccccccccccccCCCCCCCceeEEE
Q 009150          193 IRTIFCWGDKESEGFWHKQDTSADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       193 I~~I~l~a~~~A~~Fw~KqGF~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +..+++-.+..+..||+|+||+..++..-.+..+..    +.+|.
T Consensus       136 ~~~i~levn~ra~~FY~k~GF~~~g~~~fy~~~g~p----~~lm~  176 (198)
T 2g0b_A          136 IDYLCISINPKHDTFYSLLGFTQIGALKHYGTVNAP----AIARA  176 (198)
T ss_dssp             CSEEEEEECGGGHHHHHHTTCEEEEEEEEETTTTEE----EEEEE
T ss_pred             CCEEEEEeCHHHHHHHHHCCCEEeeCCccCCCCCcc----eEeee
Confidence            999999777789999999999999987533333333    66776

>1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A*

Probab=98.75  E-value=1.9e-08  Score=98.66  Aligned_cols=80  Identities=11%  Similarity=0.072  Sum_probs=68.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCC----------cEEEEEccc---cchh
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGI----------RTIFCWGDK---ESEG  206 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI----------~~I~l~a~~---~A~~  206 (542)
                      .+|++||.+.+...+.....++|..++|+|+|||+|||+.|+.++++++++.|+          ..+.+++..   .|..
T Consensus       216 ~~g~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~Glg~~ll~~~~~~~~~~g~~~~~~~~~~~~~i~l~v~~~N~~a~~  295 (318)
T 1p0h_A          216 RPGRLLGFHWTKVHPDHPGLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVR  295 (318)
T ss_dssp             --CCEEEEEEEECCTTSTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHC---------CCCEEEEEEETTCHHHHH
T ss_pred             CCCcEEEEEEeeccCCCCceEEEEEEEECHHhccCCHHHHHHHHHHHHHHHcccccccccccccceEEEEecCCCHHHHH
Confidence            468999999888776545689999999999999999999999999999999999          998887654   3899


Q ss_pred             hhhhcCccccccc
Q 009150          207 FWHKQDTSADTAV  219 (542)
Q Consensus       207 Fw~KqGF~~~~~~  219 (542)
                      ||+|+||+..+..
T Consensus       296 ~y~~~GF~~~~~~  308 (318)
T 1p0h_A          296 TYQSLGFTTYSVD  308 (318)
T ss_dssp             HHHHTTCEEEEEE
T ss_pred             HHHhcCCEEEeEE
Confidence            9999999987754

>3frm_A Uncharacterized conserved protein; APC61048, staphylococcus epidermidis ATCC structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis}

Probab=98.74  E-value=1.3e-08  Score=99.14  Aligned_cols=76  Identities=12%  Similarity=0.136  Sum_probs=62.4

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      ++|++||.+.+....   ..++|..++|+|+|||+|||++|++++++.++..++.-+ +..+..|..||+|+||+..+..
T Consensus       171 ~~g~~vG~~~~~~~~---~~~~i~~l~V~p~~Rg~GiG~~Ll~~~~~~a~~~~i~lv-~~~n~~a~~~Y~k~GF~~~g~~  246 (254)
T 3frm_A          171 VNHQPVGIVDIIMTD---KTIEIDGFGVLEEFQHQGIGSEIQAYVGRMANERPVILV-ADGKDTAKDMYLRQGYVYQGFK  246 (254)
T ss_dssp             ETTEEEEEEEEEECS---SCEEEEEEEECGGGTTSSHHHHHHHHHHHHHTTCCEEEE-ECSSCTTHHHHHHTTCEEEEEE
T ss_pred             ECCEEEEEEEEEEcC---CEEEEEEEEECHHHcCCCHHHHHHHHHHHHhccCcEEEE-ECCchHHHHHHHHCCCEEeeeE
Confidence            378999999887543   468999999999999999999999999999966555442 2235569999999999998765

>2vzy_A RV0802C; transferase, GCN5-related N-acetyltransferase, succinyltransferase; HET: FLC; 2.00A {Mycobacterium tuberculosis} PDB: 2vzz_A*

Probab=98.73  E-value=1.7e-08  Score=93.35  Aligned_cols=100  Identities=9%  Similarity=-0.044  Sum_probs=76.0

Q ss_pred             CCCcEEEEEEeeeccC-CCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~-d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      .+|++||.+.+..... ....++|. ++|+++|||+|||+.|++.+++++.+ .|+..|.+.+..   .|..||+|+||+
T Consensus        86 ~~~~~iG~~~~~~~~~~~~~~~eig-~~v~~~~rgkGig~~ll~~l~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~  164 (218)
T 2vzy_A           86 VDGRAVGVQALSSKDFPITRQVDSG-SWLGLRYQGHGYGTEMRAAVLYFAFAELEAQVATSRSFVDNPASIAVSRRNGYR  164 (218)
T ss_dssp             ETTEEEEEEEEEEESHHHHCEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCE
T ss_pred             ECCEEEEEEEEeccccCCCCeEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhhCCceEEEEEeccCCHHHHHHHHHCCCE
Confidence            4679999998876542 23577786 58999999999999999999999998 799999887765   389999999999


Q ss_pred             ccccccccccCCCCCCCceeEEE-Eecccc
Q 009150          215 ADTAVSLKFCFPVKPCEKSSLVT-VNRSLE  243 (542)
Q Consensus       215 ~~~~~~~~~~~~~~~c~ea~lm~-l~~~~~  243 (542)
                      ..+.....  +.+. .....+|. +..+..
T Consensus       165 ~~g~~~~~--~~g~-~~d~~~~~l~~~~~~  191 (218)
T 2vzy_A          165 DNGLDRVA--REGA-MAEALLFRLTRDDWQ  191 (218)
T ss_dssp             EEEEEEEE--ETTE-EEEEEEEEEEHHHHH
T ss_pred             Eeeeeecc--cCCc-eeeEEEEEEcHHHhc
Confidence            99877554  3332 23345555 544433

>2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein STR and functional analyses; 1.70A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 2d4o_A

Probab=98.72  E-value=1.9e-08  Score=92.46  Aligned_cols=76  Identities=14%  Similarity=0.002  Sum_probs=65.7

Q ss_pred             CCCcEEEEEEeeecc-CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVP-ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqGF~~  215 (542)
                      ++|+|||.+.++..+ .|...++|++++    ||++|||+.|++++++.|++.|+.++.|.+++.   |..||+++||..
T Consensus        42 ~~g~ivG~v~l~~~i~gdg~~~~L~dl~----~R~~GIG~~Ll~~a~~~a~~~G~~rv~L~~~~~N~~a~~fye~~Gf~~  117 (141)
T 2d4p_A           42 EGEEPMGFALAQAVWQGEATTVLVTRIE----GRSVEALRGLLRAVVKSAYDAGVYEVALHLDPERKELEEALKAEGFAL  117 (141)
T ss_dssp             ETTEEEEEEEEEEEECSSSEEEEEEEEE----ESSHHHHHHHHHHHHHHHHHTTCSEEEECCCTTCHHHHHHHHHTTCCC
T ss_pred             ECCEEEEEEeeeeEEEcCCeEEEEeHHh----hccccHHHHHHHHHHHHHHHCCCCEEEEEecccCHHHHHHHHHCCCEe
Confidence            468999966555433 355789999999    999999999999999999999999999988874   999999999999


Q ss_pred             cccc
Q 009150          216 DTAV  219 (542)
Q Consensus       216 ~~~~  219 (542)
                      .+..
T Consensus       118 ~~~~  121 (141)
T 2d4p_A          118 GPLV  121 (141)
T ss_dssp             CSSC
T ss_pred             cCcE
Confidence            8843

>2q04_A Acetoin utilization protein; ZP_00540088.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.33A {Exiguobacterium sibiricum}

Probab=98.72  E-value=2e-08  Score=96.94  Aligned_cols=100  Identities=10%  Similarity=0.095  Sum_probs=76.2

Q ss_pred             CCCcEEEEEEeeeccCC--------CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE-------------
Q 009150          140 DDDVVVAAITYQIVPAD--------TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC-------------  198 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d--------~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l-------------  198 (542)
                      .+|+|||.+.+...+.-        ...++|..++|+|+|||+|||++||+++++.++..|+-.+.+             
T Consensus        68 ~dg~iVG~~~l~~~~~~~~~~~~~~~~~~el~~i~V~p~~RG~GIG~~Ll~~~~~~a~~~~~i~l~~~~~~~~~~~~~~L  147 (211)
T 2q04_A           68 QGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSMLDPAMEHYLILTTEYYWHWDLKGSGL  147 (211)
T ss_dssp             ETTEEEEEEEEECCCTTSGGGCSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHHTSGGGGGSEEEEEECGGGCCHHHHCC
T ss_pred             ECCEEEEEEEEEeCCcccccccccccceEEEeEEEECHHHcCCCHHHHHHHHHHHHHHHcCCceeeeehhhhcCcccccc
Confidence            46799998887655321        136788899999999999999999999999988876533321             


Q ss_pred             --Ecc-ccchhhhhhcCcccccccc-ccccCCCCCCCceeEEE-Eecccch
Q 009150          199 --WGD-KESEGFWHKQDTSADTAVS-LKFCFPVKPCEKSSLVT-VNRSLEA  244 (542)
Q Consensus       199 --~a~-~~A~~Fw~KqGF~~~~~~~-~~~~~~~~~c~ea~lm~-l~~~~~~  244 (542)
                        +.+ ..|..||+|+||+..+... ....|++     ..+|. +.+.++.
T Consensus       148 ~V~~~N~~A~~lY~k~GF~~~g~~~~~~~~~~d-----~~~M~r~g~~~~~  193 (211)
T 2q04_A          148 SVWDYRKIMEKMMNHGGLVFFPTDDPEIASHPA-----NCLMARIGKHVAP  193 (211)
T ss_dssp             CHHHHHHHHHHHHHHTTCEEECCCCHHHHTSTT-----CEEEEEECTTCCH
T ss_pred             chhhhhHHHHHHHHHCCCEEeccCCccccccHH-----HHhhhhhcCCCCH
Confidence              122 2589999999999999763 3334676     88999 9988866

>3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea}

Probab=98.71  E-value=2.9e-08  Score=98.97  Aligned_cols=78  Identities=14%  Similarity=0.215  Sum_probs=64.1

Q ss_pred             CCCcEEEEEEeeec-cCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIV-PADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~-~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      ++|++||.+.++.. ..+...+++. ++|+|+|||+|||+.|++++++++++.|+..+. .+..   .|..||+|+||+.
T Consensus       187 ~~g~iVG~~~~~~~~~~~~~~~~~~-l~V~p~~RGkGiG~~Ll~~l~~~a~~~g~~~i~-~v~~~N~~A~~~YeklGF~~  264 (276)
T 3iwg_A          187 HKGKLLAAGECRLFDQYQTEYADLG-MIVAQSNRGQGIAKKVLTFLTKHAATQGLTSIC-STESNNVAAQKAIAHAGFTS  264 (276)
T ss_dssp             ETTEEEEEEEEEECSSSCTTEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHTTCEEEE-EEETTCHHHHHHHHHTTEEE
T ss_pred             ECCEEEEEEEEEeccccCCcceEEE-EEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEE-EEccCCHHHHHHHHHCCCEE
Confidence            36899999987652 2334566555 999999999999999999999999999999997 4432   4999999999999


Q ss_pred             cccc
Q 009150          216 DTAV  219 (542)
Q Consensus       216 ~~~~  219 (542)
                      .+.+
T Consensus       265 ~~~l  268 (276)
T 3iwg_A          265 AHRI  268 (276)
T ss_dssp             EEEE
T ss_pred             eeEE
Confidence            8765

>3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative acetyltransferase, acetyltransferase family, structural genomics; 2.00A {Thermoplasma acidophilum dsm 1728}

Probab=98.70  E-value=1.7e-08  Score=99.84  Aligned_cols=77  Identities=16%  Similarity=0.020  Sum_probs=67.3

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc--c-cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD--K-ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~--~-~A~~Fw~KqGF~~~  216 (542)
                      ++|++||.+.+...+  ...++|..++|+|+|||+|||+.|++++++++++.|+..+ +.+.  + .|..||+|+||+..
T Consensus        67 ~~g~iVG~~~~~~~~--~~~~~I~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i-l~v~~~N~~a~~~Yek~GF~~~  143 (266)
T 3c26_A           67 VSGRPVATIHMEKLP--DGSVMLGGLRVHPEYRGSRLGMSIMQETIQFLRGKTERLR-SAVYSWNEPSLRLVHRLGFHQV  143 (266)
T ss_dssp             ETTEEEEEEEEEECT--TSCEEEEEEEECGGGTTSSHHHHHHHHHHHHHBTTBSEEE-EEEETTCHHHHHHHHHHTCEEE
T ss_pred             ECCEEEEEEEEEEcC--CCeEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEE-EEEcCCCHHHHHHHHHCCCEEe
Confidence            467999999887764  3589999999999999999999999999999999999999 5543  3 58999999999988


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       144 ~~~  146 (266)
T 3c26_A          144 EEY  146 (266)
T ss_dssp             EEE
T ss_pred             eEE
Confidence            765

>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*

Probab=98.69  E-value=3.6e-08  Score=98.40  Aligned_cols=77  Identities=18%  Similarity=0.175  Sum_probs=65.9

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      +++.+||.+.+...+.+...++| .++|+|+|||+|||+.|++++.+++++.|+.+|.+.+..   .|..||+|+||+..
T Consensus       214 ~~~~~vG~~~~~~~~~~~~~~e~-~~~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~  292 (333)
T 4ava_A          214 DGSDPVADARFVRDETDPTVAEI-AFTVADAYQGRGIGSFLIGALSVAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQ  292 (333)
T ss_dssp             ETTEEEEEEEEEECSSCTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCCCE
T ss_pred             eCCCeEEEEEEEecCCCCCeEEE-EEEECHHhcCCCHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCcee
Confidence            35678999988877655567776 488999999999999999999999999999999877655   48999999999976


Q ss_pred             c
Q 009150          217 T  217 (542)
Q Consensus       217 ~  217 (542)
                      .
T Consensus       293 ~  293 (333)
T 4ava_A          293 R  293 (333)
T ss_dssp             E
T ss_pred             c
Confidence            4

>2qml_A BH2621 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.55A {Bacillus halodurans}

Probab=98.65  E-value=4.3e-08  Score=88.93  Aligned_cols=96  Identities=14%  Similarity=0.038  Sum_probs=72.2

Q ss_pred             CCCcEEEEEEeeeccC-------CCceeEee-eeeec-cCccccChHHHHHHHHHHHHHH-cCCcEEEEEcccc---chh
Q 009150          140 DDDVVVAAITYQIVPA-------DTQYAEVP-LAAVS-SIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDKE---SEG  206 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~-------d~~~aeI~-~~AV~-~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~~---A~~  206 (542)
                      ++|++||.+.+.....       +...++|. .++|. |+|||+|||+.|+..+++++.+ .|+..|.+.+...   |..
T Consensus        77 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~  156 (198)
T 2qml_A           77 INGVPMSYWESYWVKEDIIANYYPFEEHDQGIHLLIGPQEYLGQGLIYPLLLAIMQQKFQEPDTNTIVAEPDRRNKKMIH  156 (198)
T ss_dssp             ETTEEEEEEEEEEGGGSGGGGGSCCCTTCEEEEEEECSGGGSSSSTHHHHHHHHHHHHHTSTTCCEEEECCBTTCHHHHH
T ss_pred             ECCEEEEEEEEEecccccccccccCCCccEEEEEEEeCHHHcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHH
Confidence            4679999998865432       22344454 47888 5999999999999999999987 5999999887764   999


Q ss_pred             hhhhcCccccccccccccCCCCCCCceeEEE-Eeccc
Q 009150          207 FWHKQDTSADTAVSLKFCFPVKPCEKSSLVT-VNRSL  242 (542)
Q Consensus       207 Fw~KqGF~~~~~~~~~~~~~~~~c~ea~lm~-l~~~~  242 (542)
                      ||+|+||+..+.....   ..    ...+|. +..+.
T Consensus       157 ~y~k~GF~~~~~~~~~---~~----d~~~~~l~~~~~  186 (198)
T 2qml_A          157 VFKKCGFQPVKEVELP---DK----IGLLMKCEQNVF  186 (198)
T ss_dssp             HHHHTTCEEEEEEECS---SC----EEEEEEEEHHHH
T ss_pred             HHHHCCCEEEEEEecC---Cc----cEEEEEcCHHHh
Confidence            9999999999876432   12    266666 44443

>3r1k_A Enhanced intracellular surviVal protein; GNAT, acetyltransferase, transferase; HET: COA; 1.95A {Mycobacterium tuberculosis} PDB: 3sxo_A 3ryo_A 3uy5_A

Probab=98.63  E-value=4.2e-08  Score=103.54  Aligned_cols=77  Identities=18%  Similarity=0.265  Sum_probs=65.8

Q ss_pred             CCcEEEEEEeeecc---CC-C--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcc
Q 009150          141 DDVVVAAITYQIVP---AD-T--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTS  214 (542)
Q Consensus       141 ~~~VIg~i~~~i~~---~d-~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~  214 (542)
                      +|+|||.+.+....   .+ .  ..++|..++|+|+|||+|||++||+++++.+++.|+..+.+.+.  +..||+|+||+
T Consensus        81 ~g~lVG~~~~~~~~~~~~gg~~~~~~~I~~v~V~P~~Rg~Gig~~Ll~~~l~~a~~~g~~~~~L~~~--a~~fY~r~GF~  158 (428)
T 3r1k_A           81 GSEVVGMALYMDLRLTVPGEVVLPTAGLSFVAVAPTHRRRGLLRAMCAELHRRIADSGYPVAALHAS--EGGIYGRFGYG  158 (428)
T ss_dssp             -CCEEEEEEEEEEEEEETTTEEEEEEEEEEEEECTTSCSSSHHHHHHHHHHHHHHHTTCSEEEEECS--STTSSGGGTCE
T ss_pred             CCcEEEEEEEEeeeeccCCCcccceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecC--CHHHHHhCCCE
Confidence            48999988776543   22 2  46899999999999999999999999999999999998888764  78999999999


Q ss_pred             ccccc
Q 009150          215 ADTAV  219 (542)
Q Consensus       215 ~~~~~  219 (542)
                      .....
T Consensus       159 ~~~~~  163 (428)
T 3r1k_A          159 PATTL  163 (428)
T ss_dssp             ECCEE
T ss_pred             EeeeE
Confidence            88765

>2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10

Probab=98.62  E-value=4.6e-08  Score=99.98  Aligned_cols=78  Identities=9%  Similarity=0.126  Sum_probs=68.1

Q ss_pred             CCCcEEEEEEeeecc-----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVP-----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~  214 (542)
                      ++|++||.+.+....     .....++|..++|+|+|||+|||+.||+++++++++.|+..+.+  +..+..||+|+||.
T Consensus        55 ~~g~~vG~~~~~~~~~~~~g~~~~~~~i~~v~V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~i~l--n~~a~~~Y~~~GF~  132 (396)
T 2ozg_A           55 REQKVAGGLAILPMGQWWGGQRVPMAGIAAVGIAPEYRGDGAAIALIQHTLQEISEQDIPISVL--YPATQRLYRKAGYE  132 (396)
T ss_dssp             ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEE--CCSCHHHHHHTTCE
T ss_pred             ECCEEEEEEEEEeccceECCeecceeEEEEEEEChhhccCCHHHHHHHHHHHHHHHCCCeEEEE--ccccHHHHHhcCCe
Confidence            467999999887653     12257889999999999999999999999999999999999988  55699999999999


Q ss_pred             ccccc
Q 009150          215 ADTAV  219 (542)
Q Consensus       215 ~~~~~  219 (542)
                      .....
T Consensus       133 ~~~~~  137 (396)
T 2ozg_A          133 QAGSS  137 (396)
T ss_dssp             EEEEE
T ss_pred             EcccE
Confidence            98765

>2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10

Probab=98.62  E-value=4.5e-08  Score=100.88  Aligned_cols=78  Identities=6%  Similarity=0.081  Sum_probs=67.1

Q ss_pred             CCCcEEEEEEeeecc---CCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~  214 (542)
                      ++|+|||.+.+....   .+.  ..++|..++|+|+|||+|||++||+++++.+++.|+..+.+++.  +..||+|+||.
T Consensus        67 ~~g~lVG~~~~~~~~~~~~g~~~~~~~i~~v~V~P~~Rg~Gig~~Ll~~~l~~~~~~g~~~~~L~~~--~~~fY~r~GF~  144 (406)
T 2i00_A           67 HENQLISQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLFPY--NIPYYRRKGWE  144 (406)
T ss_dssp             ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHHTTCE
T ss_pred             ECCEEEEEEEEEEEEEEECCEEEEeccEEEEEEChhhCCCCHHHHHHHHHHHHHHhCCCeEEEEEcc--ChhhhhccCce
Confidence            368999998875443   222  47899999999999999999999999999999999998888776  79999999999


Q ss_pred             ccccc
Q 009150          215 ADTAV  219 (542)
Q Consensus       215 ~~~~~  219 (542)
                      .....
T Consensus       145 ~~~~~  149 (406)
T 2i00_A          145 IMSDK  149 (406)
T ss_dssp             EEEEE
T ss_pred             Eccce
Confidence            88765

>2kcw_A Uncharacterized acetyltransferase YJAB; GNAT fold, acyltransferase; NMR {Escherichia coli}

Probab=98.62  E-value=2.7e-08  Score=85.33  Aligned_cols=71  Identities=15%  Similarity=0.110  Sum_probs=57.9

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCcccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADTA  218 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~~  218 (542)
                      ++|++||.+.+..       ++|..++|+|+|||+|||+.|++++.++++.   -.+.+...| .|..||+|+||+..+.
T Consensus        58 ~~~~~vG~~~~~~-------~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~---~~~~v~~~N~~a~~~y~k~Gf~~~~~  127 (147)
T 2kcw_A           58 ERDQPVGFMLLSG-------QHMDALFIDPDVRGCGVGRVLVEHALSMAPE---LTTNVNEQNEQAVGFYKKVGFKVTGR  127 (147)
T ss_dssp             TTSCEEEEEEEET-------TEEEEEEECHHHHTTTHHHHHHHHHHHHCTT---CEEEEETTCHHHHHHHHHHTEEEEEE
T ss_pred             CCCCEEEEEEEec-------ceeccEEECHHHhCCCHHHHHHHHHHHhccc---eEEEEecCChHHHHHHHHCCCEEece
Confidence            3489999987752       5688999999999999999999999999853   344455544 5999999999999887


Q ss_pred             cc
Q 009150          219 VS  220 (542)
Q Consensus       219 ~~  220 (542)
                      ..
T Consensus       128 ~~  129 (147)
T 2kcw_A          128 SE  129 (147)
T ss_dssp             CS
T ss_pred             ee
Confidence            54

>3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus}

Probab=98.61  E-value=5e-08  Score=94.85  Aligned_cols=78  Identities=12%  Similarity=0.039  Sum_probs=67.1

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc----ccchhhhhhcCcccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD----KESEGFWHKQDTSAD  216 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~----~~A~~Fw~KqGF~~~  216 (542)
                      +|++||.+.+...+ +...++|..++|+|+|||+|||+.|+.++++++++.|+..+.+.++    ..+..||+|+||+..
T Consensus       229 ~g~~vG~~~~~~~~-~~~~~~i~~~~v~p~~rg~G~g~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~~a~~~y~~~GF~~~  307 (330)
T 3tt2_A          229 TDSGHIVGTCLGQE-TAGKGWIGSVGVRRPWRGRGIALALLQEVFGVYYRRGVREVELSVDAESRTGAPRLYRRAGMHVK  307 (330)
T ss_dssp             TTTTEEEEEEEEEE-ETTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEEEETTTCSCHHHHHTTCEEE
T ss_pred             CCEEEEEEEEecCC-CCCcEEEEEeeECHHHhhcCHHHHHHHHHHHHHHHcCCCeEEEEEecCCChhHHHHHHHcCCEEe
Confidence            67899998777632 2347899999999999999999999999999999999999987643    358999999999998


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      ...
T Consensus       308 ~~~  310 (330)
T 3tt2_A          308 HRY  310 (330)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            754

>2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest center for struct genomics, MCSG, structural genomics, unknown function; HET: EPE PG4; 2.40A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10

Probab=98.60  E-value=5.8e-08  Score=99.70  Aligned_cols=78  Identities=12%  Similarity=0.048  Sum_probs=66.8

Q ss_pred             CCCcEEEEEEeeecc---CCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~  214 (542)
                      ++|++||.+.+..+.   .+.  ..++|..++|+|+|||||||++||+++++.+++.|+..+.+++.  +..||+|+||.
T Consensus        54 ~~g~~vg~~~~~~~~~~~~g~~~~~~~i~~v~V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~~~L~~~--~~~~Y~~~GF~  131 (400)
T 2hv2_A           54 IDEQLTSQVMATPFQVNFHGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLADLAKQKVALSYLAPF--SYPFYRQYGYE  131 (400)
T ss_dssp             ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCSSCHHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHTTTCE
T ss_pred             ECCEEEEEEEEeeeEEEECCEEEEeccEeEEEEChhhcCCCHHHHHHHHHHHHHHHcCceEEEEecC--CHhHHHhcCCE
Confidence            368999998876543   222  46899999999999999999999999999999999998888765  69999999999


Q ss_pred             ccccc
Q 009150          215 ADTAV  219 (542)
Q Consensus       215 ~~~~~  219 (542)
                      .....
T Consensus       132 ~~~~~  136 (400)
T 2hv2_A          132 QTFEQ  136 (400)
T ss_dssp             ECCEE
T ss_pred             EeceE
Confidence            88765

>3g3s_A GCN5-related N-acetyltransferase; ZP_00874857.1, acetyltransferase (GNAT) family, structural joint center for structural genomics, JCSG; HET: MSE; 1.80A {Streptococcus suis}

Probab=98.59  E-value=5.7e-08  Score=96.26  Aligned_cols=75  Identities=15%  Similarity=0.026  Sum_probs=62.7

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTA  218 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~  218 (542)
                      +|++||.+.+.....  ..++| .++|+|+|||||||+.|+.++++++++.|+...+...+..|..||+|+||+..+.
T Consensus       168 ~g~iVG~~~~~~~~~--~~~ei-~i~v~p~~rGkGlg~~Ll~~li~~a~~~g~~~~~~~~N~~a~~lYeKlGF~~~g~  242 (249)
T 3g3s_A          168 KGQVVSGASSYASYS--AGIEI-EVDTREDYRGLGLAKACAAQLILACLDRGLYPSWDAHTLTSLKLAEKLGYELDKA  242 (249)
T ss_dssp             TTEEEEEEEEEEEET--TEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTTCEEECEESSHHHHHHHHHHTCCEEEE
T ss_pred             CCEEEEEEEEEEecC--CeEEE-EEEEChHhcCCCHHHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHCCCEEeee
Confidence            578999887766543  36666 5899999999999999999999999999998655555556999999999998764

>3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.75A {Bacillus anthracis}

Probab=98.59  E-value=7.6e-08  Score=99.08  Aligned_cols=78  Identities=12%  Similarity=0.090  Sum_probs=66.8

Q ss_pred             CCCcEEEEEEeeec---cCCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIV---PADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~---~~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~  214 (542)
                      ++|++||.+.+..+   +.+.  ..++|..++|+|+|||+|||++||+++++.+++.|+..+.+.+  .+..||+|.||.
T Consensus        52 ~~g~lvG~~~~~~~~~~~~~~~~~~~~i~~v~V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~~~l~~--~a~~~Y~~~Gf~  129 (388)
T 3n7z_A           52 EGENLAAKLHLIPFHIYIGKEKFKMGGVAGVATYPEYRRSGYVKELLQHSLQTMKKDGYTVSMLHP--FAVSFYRKYGWE  129 (388)
T ss_dssp             ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGGGGCHHHHHHHHHHHHHHHHTCCEEEECC--SCHHHHHTTTCE
T ss_pred             ECCEEEEEEEEEeEEEEECCEEEEeeEEEEEEECHHHCCCChHHHHHHHHHHHHHHCCCcEEEEcc--CChhhhhhcCcE
Confidence            46899999884433   3333  4679999999999999999999999999999999999888874  599999999999


Q ss_pred             ccccc
Q 009150          215 ADTAV  219 (542)
Q Consensus       215 ~~~~~  219 (542)
                      .....
T Consensus       130 ~~~~~  134 (388)
T 3n7z_A          130 LCANL  134 (388)
T ss_dssp             EEEEE
T ss_pred             EeccE
Confidence            88865

>3sxn_A Enhanced intracellular surviVal protein; GNAT fold, acetyltransferase, acetyl COA binding, transferas; HET: COA; 2.03A {Mycobacterium smegmatis}

Probab=98.57  E-value=1e-07  Score=100.30  Aligned_cols=76  Identities=21%  Similarity=0.287  Sum_probs=66.1

Q ss_pred             CcEEEEEEeeecc---CCC---ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150          142 DVVVAAITYQIVP---ADT---QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA  215 (542)
Q Consensus       142 ~~VIg~i~~~i~~---~d~---~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~  215 (542)
                      |+|||.+.+....   .+.   ..++|..++|+|+|||||||++||+++++.+++.|+..+++.+.  +..||+|.||+.
T Consensus        76 g~lvG~~~~~~~~~~~~g~~~~~~~~I~~v~V~P~~Rg~Gig~~Ll~~~l~~~~~~g~~~~~L~~~--~~~fY~r~GF~~  153 (422)
T 3sxn_A           76 DAFVGQSLYLDMQLTVPGGEVLPVAGISFVAVAPTHRRRGVLRAMYTELHDRIARAGYPLAVLTAS--EGGIYGRFGYGV  153 (422)
T ss_dssp             SSEEEEEEEEEEEEECTTSCEEEEEEEEEEEECTTTTTSSHHHHHHHHHHHHHHHHTCSEEEECCS--STTSSGGGTCEE
T ss_pred             CcEEEEEEEEEeEeecCCCcccccceEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcEEEEecC--CHHHHHhCCCEE
Confidence            8999988776543   232   56899999999999999999999999999999999998888754  789999999999


Q ss_pred             cccc
Q 009150          216 DTAV  219 (542)
Q Consensus       216 ~~~~  219 (542)
                      ....
T Consensus       154 ~~~~  157 (422)
T 3sxn_A          154 ATIE  157 (422)
T ss_dssp             CCEE
T ss_pred             ecee
Confidence            8876

>2zpa_A Uncharacterized protein YPFI; RNA modification enzyme, RNA helicase, acetyltransferase, GCN5 acetyltransferase; HET: ACO ADP; 2.35A {Escherichia coli K12}

Probab=98.55  E-value=1e-07  Score=106.67  Aligned_cols=146  Identities=13%  Similarity=0.049  Sum_probs=94.9

Q ss_pred             ceEEeeCCCCccccchhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeee
Q 009150           73 YIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQI  152 (542)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i  152 (542)
                      -.+..+|+.+. -. ...+|+.+-.||..-=..-+        -+-|.+. +|.-...+....    .+|+|||++....
T Consensus       349 ~~~~~~~~~~l-~~-~e~~L~~~~~Ll~~aHYr~s--------p~dL~~l-lD~p~~~l~va~----~~g~IVG~i~v~~  413 (671)
T 2zpa_A          349 IVISAFEQTLW-QS-DPETPLKVYQLLSGAHYRTS--------PLDLRRM-MDAPGQHFLQAA----GENEIAGALWLVD  413 (671)
T ss_dssp             CEEEEEETTHH-HH-CTHHHHHHHHHHHHHSSSBC--------HHHHHHH-HHCTTEEEEEEE----CSSSEEEEEEEEE
T ss_pred             ceEEEEcHHHh-hc-CHHHHHHHHHHHHhcccCCC--------HHHHHHH-hcCCCceEEEEE----ECCeEEEEEEEEE
Confidence            34566777766 22 35678888888772222222        2336666 565555554443    4689999987754


Q ss_pred             ccC-----------------------------------CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEE
Q 009150          153 VPA-----------------------------------DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIF  197 (542)
Q Consensus       153 ~~~-----------------------------------d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~  197 (542)
                      ...                                   ....++|..+||+|+|||+|||++||+++++.++..++-.+.
T Consensus       414 eG~l~~~~~~~~~~g~rRp~G~lip~~l~~~~~~~e~~~~~~~~I~~IAV~P~~rg~GiG~~LL~~~e~~a~~~~~l~v~  493 (671)
T 2zpa_A          414 EGGLSQQLSQAVWAGFRRPRGNLVAQSLAAHGNNPLAATLRGRRVSRIAVHPARQREGTGRQLIAGALQYTQDLDYLSVS  493 (671)
T ss_dssp             EECCCHHHHHHHHHTSCCCSSCHHHHHHHHHSSCTTGGGSEEEEEEEEEECTTSCSSSHHHHHHHHHHHTCCSCSEEEEE
T ss_pred             cCCcCHHHHHHHHhcccCCCCcchhHHHHHhhcchhhcccCceEEEEEEECHHHcCCCHHHHHHHHHHHHHhcCCEEEEE
Confidence            320                                   124678999999999999999999999999987444443333


Q ss_pred             EEccccchhhhhhcCcccccccc-ccccCCCCCCCceeEEE
Q 009150          198 CWGDKESEGFWHKQDTSADTAVS-LKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       198 l~a~~~A~~Fw~KqGF~~~~~~~-~~~~~~~~~c~ea~lm~  237 (542)
                      .-.+..+..||+|+||+.+..-. +-...++.    +.+|.
T Consensus       494 ~~~n~~ai~FYek~GF~~v~ig~~~~~~~Ge~----a~iM~  530 (671)
T 2zpa_A          494 FGYTGELWRFWQRCGFVLVRMGNHREASSGCY----TAMAL  530 (671)
T ss_dssp             EECCHHHHHHHHHTTCEEEEECSSCCTTTCCC----EEEEE
T ss_pred             ecCCHHHHHHHHHCCCEEEeeeeccccCCCce----eeeee
Confidence            22455699999999999885321 11122343    77887

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=98.52  E-value=3.2e-07  Score=88.99  Aligned_cols=94  Identities=7%  Similarity=-0.017  Sum_probs=72.5

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHH-HcCCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQ-SVGIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk-~~GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      +++++ |.+.+.....   .++|. +.|+++|||+|||+.|++.+++++. ..|+.+|.+.+..   .|..||+|+||+.
T Consensus        77 ~~g~~-G~~~~~~~~~---~~~ig-~~v~~~~~g~G~g~~l~~~l~~~a~~~~g~~~i~~~v~~~N~~s~~ly~k~GF~~  151 (301)
T 2zw5_A           77 DGTVP-GMAGLLGGTD---VPGLT-WLLRRDSWGHGYATEAAAAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARVGLTE  151 (301)
T ss_dssp             TTBCC-EEEEEESSCS---SCEEE-EEECTTSTTTTHHHHHHHHHHHHHHTTTCCSEEEEEEESSCHHHHHHHHHTTCEE
T ss_pred             CCCCe-EEEEEecCCC---eEEEE-EEECHhHcCCCHHHHHHHHHHHHHHhcCCccEEEEEeCCCCHHHHHHHHHcCCcC
Confidence            46788 9887665543   67776 6899999999999999999999994 5799999888754   4999999999999


Q ss_pred             cccccccccCCCCCCCceeEEE-Eecc
Q 009150          216 DTAVSLKFCFPVKPCEKSSLVT-VNRS  241 (542)
Q Consensus       216 ~~~~~~~~~~~~~~c~ea~lm~-l~~~  241 (542)
                      .+..++.....+.   ...+|. +..+
T Consensus       152 ~g~~~~~~~~~g~---d~~~~~l~~~~  175 (301)
T 2zw5_A          152 RARLAQHYPHRPG---PHEMVVLGKAR  175 (301)
T ss_dssp             EEEEEECCTTSSS---CEEEEEEEEES
T ss_pred             cceehhhcccCCC---CeEEEEEeHHH
Confidence            9987655333332   356666 5444

>2jw5_A DNA polymerase lambda; BRCT domain, family X polymerase, nonhomologous END joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis; HET: DNA; NMR {Homo sapiens}

Probab=98.52  E-value=2.8e-08  Score=86.76  Aligned_cols=70  Identities=27%  Similarity=0.436  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHcCcEEeccC-CceeEEEECCC---CCcHHHHHH--HhcCCeEeCHHHHHHHHHcCCCCCCCCcccC
Q 009150          412 KVHLTKVIEDLGGAVTSDG-STSTHVVTGKV---RKTLNFLTA--LCSGAWIVSPNWLKESFREGRFVDESSYMLN  481 (542)
Q Consensus       412 k~~L~kiIkkLGG~V~~d~-~~~THLIt~k~---~RTlKfL~A--IA~G~wIVSpsWL~dSlk~Gk~LdEe~YeL~  481 (542)
                      ++.....++.+||.++++. +.+||||+.+.   .+.++.|.+  +..+..||+++|+.+|+++++++||+.|.+.
T Consensus        29 ~~i~~~~a~~~Ga~v~~~~~~~vTHVVvd~~~s~~~~l~~l~~~~l~~~~~iV~~~Wv~dci~~~~llde~~y~~~  104 (106)
T 2jw5_A           29 AELFEKQIVQHGGQLCPAQGPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQERRLVDVAGFSIF  104 (106)
T ss_dssp             TTHHHHHHHHTTCCCCSTTCTTCCEEEECSSSCHHHHHHHTTCSSCCSSCEEEEHHHHHHHHHTCSCCCGGGTBCS
T ss_pred             HHHHHHHHHHcCCEEeeccCCCccEEEEcCCCCHHHHHHHHhhcccCCCcEEecCchHHHHHhcCcccCccccccc
Confidence            3456778999999999997 89999999852   223333432  3346689999999999999999999999654

>2ep8_A Pescadillo homolog 1; A/B/A 3 layers, nucleolus, ribosome biogenesis, DNA damage, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.45  E-value=3.3e-07  Score=79.44  Aligned_cols=75  Identities=21%  Similarity=0.390  Sum_probs=58.9

Q ss_pred             CCeEEEEcccCChhhHHHHHHHHHHcCcEEecc------------CCceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHH
Q 009150          397 KCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSD------------GSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLK  464 (542)
Q Consensus       397 k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d------------~~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~  464 (542)
                      ++..+.+++-.+   +..+..+|+.+||.|..+            ...+||+|++++.-. +    ...+..+|.|+||.
T Consensus        14 ~g~~F~i~~e~p---~~~le~~I~~~GG~v~~~~~~~~g~~~~~~~~~iTh~I~drp~~~-~----~~~~r~~VqPqWV~   85 (100)
T 2ep8_A           14 EGLKFFLNREVP---REALAFIIRSFGGEVSWDKSLCIGATYDVTDSRITHQIVDRPGQQ-T----SVIGRCYVQPQWVF   85 (100)
T ss_dssp             SSCEEECCSSSC---HHHHHHHHHHTTCEEECCTTTSSCCCSCTTCTTCCEEECSCTTTS-C----CBTTBEEECTHHHH
T ss_pred             CCcEEEEecCCC---HHHHHHHHHHcCCEEEeccccccCcccccCCCceEEEEecccchh-h----hcCCCeEEcchHHH
Confidence            457777766443   567899999999999875            268999999975311 1    23567999999999


Q ss_pred             HHHHcCCCCCCCCcc
Q 009150          465 ESFREGRFVDESSYM  479 (542)
Q Consensus       465 dSlk~Gk~LdEe~Ye  479 (542)
                      ||++++++|++++|.
T Consensus        86 Dcin~~~lLp~~~Y~  100 (100)
T 2ep8_A           86 DSVNARLLLPVAEYF  100 (100)
T ss_dssp             HHHHHTSCCCTTTCC
T ss_pred             HHHhcCCcCChhhcC
Confidence            999999999999983

>1xmt_A Putative acetyltransferase; structural genomics, protein structure initiative, CESG, AT1G77540, center for eukaryotic structural genomics; 1.15A {Arabidopsis thaliana} SCOP: d.108.1.1 PDB: 2q44_A 2evn_A 2il4_A* 2q4y_A*

Probab=98.43  E-value=2e-07  Score=80.24  Aligned_cols=70  Identities=16%  Similarity=0.091  Sum_probs=57.5

Q ss_pred             EEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchh-hhhhcC-cccc
Q 009150          144 VVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEG-FWHKQD-TSAD  216 (542)
Q Consensus       144 VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~-Fw~KqG-F~~~  216 (542)
                      .+|.+.+..... ...++|..++|+++|||+|||+.||+++++.+++.|+..+.+.++  +.. ||+|+. |...
T Consensus        22 ~vG~i~~~~~~~-~~~~~i~~i~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~~--~~~~f~~k~~~~~~~   93 (103)
T 1xmt_A           22 HEAFIEYKMRNN-GKVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSISIIPSCSY--VSDTFLPRNPSWKPL   93 (103)
T ss_dssp             SSSEEEEEEETT-TTEEEEEEEECCGGGTTSCHHHHHHHHHHHHHHHTTCEEEECSHH--HHHTHHHHCGGGGGG
T ss_pred             cEEEEEEEEcCC-CCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCeEEEEehh--hhHHHHHhChhHHhh
Confidence            357777765542 247889999999999999999999999999999999998877665  777 999994 6543

>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*

Probab=98.43  E-value=6.4e-07  Score=89.27  Aligned_cols=83  Identities=17%  Similarity=0.273  Sum_probs=60.7

Q ss_pred             CCeEEEEcccC---------ChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCC-CCcHHHHHHHh----cCCeEeCHH
Q 009150          397 KCFRIMLMNIA---------DDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKV-RKTLNFLTALC----SGAWIVSPN  461 (542)
Q Consensus       397 k~~rVlfSG~~---------de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~-~RTlKfL~AIA----~G~wIVSps  461 (542)
                      ++++|.|-+..         .....+.+...+..+||.+++.. +.+||||+... .| ...+.++.    .+..||+|+
T Consensus       166 ~~~~vy~~~~~~~~~~~~~i~~~~l~~~~~~i~~~GG~v~~~l~~~vTHVVv~~~~~r-~~~~~~~~~~~~~~~~iV~~~  244 (263)
T 3ii6_X          166 RRHTVYLDSYAVINDLSTKNEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSR-VADFKAFRRTFKRKFKILKES  244 (263)
T ss_dssp             TTCEEEECCBSSTTCGGGBCCSSHHHHHHHHHHHTTCEEESSCCTTCCEEEECSCCTT-HHHHHHHHHTCSSCCEEEETH
T ss_pred             CCeEEEEecccccCCcccccchhHHHHHHHHHHccCCEEecCCCCCceEEEECCCCcc-HHHHHHHHhhcCCCCEEeChH
Confidence            45777774431         11112345788999999999997 67999999863 24 22333333    468999999


Q ss_pred             HHHHHHHcCCCCCCCCccc
Q 009150          462 WLKESFREGRFVDESSYML  480 (542)
Q Consensus       462 WL~dSlk~Gk~LdEe~YeL  480 (542)
                      ||.+|+++|+++||++|.+
T Consensus       245 Wv~dci~~~~~l~E~~Y~i  263 (263)
T 3ii6_X          245 WVTDSIDKCELQEENQYLI  263 (263)
T ss_dssp             HHHHHHHTTSCCCGGGTBC
T ss_pred             HHHHHHHcCCcCCHhhCCC
Confidence            9999999999999999964

>1yk3_A Hypothetical protein RV1347C/MT1389; acyltransferase, GCN5-related fold, structural genomics, PSI, protein structure initiative; HET: BOG; 2.20A {Mycobacterium tuberculosis} SCOP: d.108.1.1

Probab=98.40  E-value=2.9e-07  Score=86.86  Aligned_cols=94  Identities=12%  Similarity=0.045  Sum_probs=66.8

Q ss_pred             CCCcEEEEEEeeeccCC-------CceeEe-eeeeec-cCccccChHHHHHHHHHHHHHH--cCCcEEEEEccc---cch
Q 009150          140 DDDVVVAAITYQIVPAD-------TQYAEV-PLAAVS-SIYQHKGVGRLLYLELRKRLQS--VGIRTIFCWGDK---ESE  205 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d-------~~~aeI-~~~AV~-~~~QgkGiG~~Lv~~l~~~lk~--~GI~~I~l~a~~---~A~  205 (542)
                      .+|++||.+.+.....+       ..-.++ ..+.|. ++|||||||+.|+..+++++.+  .|+.+|.+.+..   .|.
T Consensus        98 ~~g~~iG~~~l~~~~~~~~~~~~~~~~~~~g~~~~i~~p~~rGkGiG~~ll~~~~~~a~~~~~g~~~I~l~v~~~N~~A~  177 (210)
T 1yk3_A           98 WHGTDGGYLELYWAAKDLISHYYDADPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATR  177 (210)
T ss_dssp             ETTEEEEEEEEEEGGGBGGGGSSCCCTTCEEEEEEESCHHHHTTTHHHHHHHHHHHHHHHHCTTCCEEEECCBTTCHHHH
T ss_pred             ECCEEEEEEEEEcccccccccccCCCCCceEEEEEEEChhhcCCChHHHHHHHHHHHHHhcCCCCCEEEEecCccCHHHH
Confidence            36799999876532111       001112 245554 8999999999999999999996  899999887665   399


Q ss_pred             hhhhhcCccccccccccccCCCCCCCceeEEEEec
Q 009150          206 GFWHKQDTSADTAVSLKFCFPVKPCEKSSLVTVNR  240 (542)
Q Consensus       206 ~Fw~KqGF~~~~~~~~~~~~~~~~c~ea~lm~l~~  240 (542)
                      .||+|+||+..+...    ++++   .+.+|.|.+
T Consensus       178 ~lyek~GF~~~g~~~----~~~~---~~~~~~l~r  205 (210)
T 1yk3_A          178 RLCEWAGCKFLGEHD----TTNR---RMALYALEA  205 (210)
T ss_dssp             HHHHHHTCEEEEEEE----CSSC---EEEEEEEEC
T ss_pred             HHHHHcCCEEeEEEe----CCCC---eEEEEEecc
Confidence            999999999888653    2332   256666533

>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A

Probab=98.39  E-value=1.3e-06  Score=76.85  Aligned_cols=77  Identities=17%  Similarity=0.187  Sum_probs=67.6

Q ss_pred             CCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150          394 SNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREG  470 (542)
Q Consensus       394 s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~G  470 (542)
                      .+..+..|+|||..+.-.|.++++.|+.+||.|...+ ..|+|||++...-+-|+-.|...|++||+.+|+.+.++.+
T Consensus        31 ~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~~~g~sK~~kA~~lgI~Ii~E~~f~~ll~~~  108 (109)
T 2k6g_A           31 NCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRNL  108 (109)
T ss_dssp             TTTTTCEEEEESBCSSCCHHHHHHHHHHTTCEEESSCCTTCCEEEECBCCCHHHHHHHHHHTCEEECHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeeeCCCCCHHHHHHHHHHcCCEeeCcccCCceEEEECCCCChHHHHHHHHcCCeEEeHHHHHHHHHhC
Confidence            3467899999998866558899999999999999998 7899999998554589999999999999999999998765

>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*

Probab=98.38  E-value=2.5e-06  Score=87.59  Aligned_cols=120  Identities=14%  Similarity=0.095  Sum_probs=78.0

Q ss_pred             HHHHHHHHHHcCcEEeccC--CceeEEEECC---CCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCCCCcccCCch-h
Q 009150          412 KVHLTKVIEDLGGAVTSDG--STSTHVVTGK---VRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDD-Y  485 (542)
Q Consensus       412 k~~L~kiIkkLGG~V~~d~--~~~THLIt~k---~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdEe~YeL~d~~-~  485 (542)
                      +.++.+.++.||+.++ ++  +.||||||.+   .+=|.|.|+|+..|+|||+|+||.+..+.-+-+-++.=.|+++. +
T Consensus       126 ~~~L~~~L~~LGik~v-~~~~detTHlVm~krnT~KvTvK~L~ALI~gkPIV~~~Fl~al~~~e~~~~~~~~~wPdp~df  204 (325)
T 3huf_A          126 LSQWASNLNLLGIPTG-LRDSDATTHFVMNRQAGSSITVGTMYAFLKKTVIIDDSYLQYLSTVKESVIEDASLMPDALEC  204 (325)
T ss_dssp             HHHHHHHHHTTTCCEE-SSCCTTCCEEECCCCCSSCCCHHHHHHHHTTCEEECHHHHHHHTTCTTCCCCTTSSHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEE-EccCCCEEEEEEeccccccchHHHHHHHHCCCcEecHHHHHHHHHhhhhhhhcccCCCChHHc
Confidence            5669999999999999 65  6799999974   45588999999999999999999998654321111111233321 1


Q ss_pred             hhh--cCCChHHHHHHhhcCCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEec
Q 009150          486 VLK--YRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSS  539 (542)
Q Consensus       486 e~~--~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~  539 (542)
                      -..  .|-..  .. |..+.=-+-|+|+++++....    .++..|+++.|=++..
T Consensus       205 lP~i~~g~Ep--~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  253 (325)
T 3huf_A          205 FKNIIKNNDQ--FP-SSPEDCINSLEGFSCAMLNTS----SESHHLLELLGLRIST  253 (325)
T ss_dssp             HHHHHTTCTT--CC-SCHHHHTTTTTTCEEEEETCC----HHHHHHHHHTTCEEEE
T ss_pred             CCCCCCCCCC--CC-CCHHHhhcccCceEEEEEcCc----hhhhHHHHHhcceeee
Confidence            000  00000  00 000000246999998776543    6889999999977643

>2coe_A Deoxynucleotidyltransferase, terminal variant; BRCT domain, DNA polymerase, teminal deoxynucleotidyltransferase, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.36  E-value=2.4e-06  Score=76.48  Aligned_cols=83  Identities=18%  Similarity=0.302  Sum_probs=61.3

Q ss_pred             CeEEEE--cccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHH---HHH----HhcCCeEeCHHHHHHHH
Q 009150          398 CFRIML--MNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNF---LTA----LCSGAWIVSPNWLKESF  467 (542)
Q Consensus       398 ~~rVlf--SG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKf---L~A----IA~G~wIVSpsWL~dSl  467 (542)
                      +++|.|  .++ ....++.+++.++..|+.|.+.. +.+||||+.+. +...+   +..    .+.+..||+.+||.+|+
T Consensus        23 g~~iy~v~~~~-g~~R~~~l~~l~r~~G~~V~~~ls~~VTHVVve~~-~~~e~~~~l~~~~l~~~~~~~lv~i~Wl~esm  100 (120)
T 2coe_A           23 DLVVFILEKKM-GTTRRALLMELARRKGFRVENELSDSVTHIVAENN-SGSDVLEWLQAQKVQVSSQPELLDVSWLIECI  100 (120)
T ss_dssp             TCEEEEECTTT-CHHHHHHHHHHHHHHTCEECSSCCTTCCEEEESSC-CHHHHHHHHHHCCCCCSSCCEEEEHHHHHHHH
T ss_pred             CeEEEEeeccc-chHHHHHHHHHHHHcCCEEeeccCCCcCEEEecCC-CHHHHHHHHhccccccccccEEeecHHHHHHH
Confidence            455655  333 33446778999999999999997 88999999754 44333   331    23468999999999999


Q ss_pred             HcCCCCCCCC-cccCC
Q 009150          468 REGRFVDESS-YMLND  482 (542)
Q Consensus       468 k~Gk~LdEe~-YeL~d  482 (542)
                      ++|+++||+. |.|..
T Consensus       101 k~g~lv~ee~~~~l~~  116 (120)
T 2coe_A          101 GAGKPVEMTGKHQLSG  116 (120)
T ss_dssp             HTTSCCCCSSSSBCCC
T ss_pred             HcCCccCcccceEecc
Confidence            9999999965 44443

>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.34  E-value=2.5e-06  Score=75.55  Aligned_cols=76  Identities=17%  Similarity=0.185  Sum_probs=67.2

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREG  470 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~G  470 (542)
                      +..+.+|+|||..+...|.+++++|+.+||.|...+ ..++|||++...-+-|+-.|...|++||+.+|+.+.++.+
T Consensus        22 ~l~G~~~v~TG~l~~~~R~e~~~~i~~~Ggkv~~sVSkkTd~LV~G~~~g~sKl~KA~~lgI~IisE~~f~~ll~~~   98 (112)
T 2ebu_A           22 CLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRTM   98 (112)
T ss_dssp             SSTTCEEEECSCCSSSCHHHHHHHHHHTTCEECSSCCSSCCEEEECSSCCSHHHHHHHHHTCEEEEHHHHHHHHHHS
T ss_pred             CcCCCEEEEeeeCCCCCHHHHHHHHHHcCCEEeccccCCeeEEEecCCCChHHHHHHHHcCCeEEeHHHHHHHHhhC
Confidence            456789999998876558899999999999999998 7899999998655689999999999999999999999753

>1sqh_A Hypothetical protein CG14615-PA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Drosophila melanogaster} SCOP: d.108.1.5

Probab=98.34  E-value=6e-07  Score=90.95  Aligned_cols=73  Identities=18%  Similarity=0.279  Sum_probs=60.4

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHH-HcCCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQ-SVGIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk-~~GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      ++|++||.+...  +    .++|..++|+|+|||+|||+.|+.++.+++. +.|+. +.+.+..   .|..||+|+||+.
T Consensus       218 ~~g~~VG~~~~~--~----~~~i~~l~V~p~~rgkGiG~~ll~~l~~~~~~~~g~~-i~l~V~~~N~~A~~lyeklGF~~  290 (312)
T 1sqh_A          218 DTGELIAWIFQN--D----FSGLGMLQVLPKAERRGLGGLLAAAMSREIARGEEIT-LTAWIVATNWRSEALLKRIGYQK  290 (312)
T ss_dssp             TTCCEEEEEEEC--T----TSSEEEEEECGGGCSSSHHHHHHHHHHHHHHHHSCSC-EEEEEETTCHHHHHHHHHHTCEE
T ss_pred             cCCCEEEEEEEc--C----CceEEEEEECHHHcCCCHHHHHHHHHHHHHHHhCCCe-EEEEEeCCCHHHHHHHHHCCCEE
Confidence            577899987532  2    4678899999999999999999999999999 89998 7655433   4999999999998


Q ss_pred             cccc
Q 009150          216 DTAV  219 (542)
Q Consensus       216 ~~~~  219 (542)
                      .+..
T Consensus       291 ~g~~  294 (312)
T 1sqh_A          291 DLVN  294 (312)
T ss_dssp             EEEE
T ss_pred             eeeE
Confidence            8753

>3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus}

Probab=98.31  E-value=8.5e-07  Score=86.10  Aligned_cols=77  Identities=10%  Similarity=-0.016  Sum_probs=60.0

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-------CCcEEEEEcc--c-cchhhhh
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-------GIRTIFCWGD--K-ESEGFWH  209 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-------GI~~I~l~a~--~-~A~~Fw~  209 (542)
                      ++|+|||.+.+.....   ...+..++|+|+|||+|||+.|++++++++++.       +...+.+.+.  + .+..||+
T Consensus        67 ~~g~~vG~~~~~~~~~---~~~~~~~~V~p~~rg~Gig~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~y~  143 (330)
T 3tt2_A           67 PDGEAAAYADVLNRRY---VQLSVYGYVHPRFRGMGLGTWLVQWGEEWIQDRMHLAPAEAQVTVQHYIRASSTSALRLME  143 (330)
T ss_dssp             TTSSEEEEEEEEEETT---TEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHHGGGSCTTBCEEEEEEEETTCHHHHHHHH
T ss_pred             CCCcEEEEEEEEecCC---eEEEEEEEECccccCccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeccccCChHHHHHHH
Confidence            5789999998844322   344567999999999999999999999999987       4455533333  3 4899999


Q ss_pred             hcCccccccc
Q 009150          210 KQDTSADTAV  219 (542)
Q Consensus       210 KqGF~~~~~~  219 (542)
                      |+||......
T Consensus       144 ~~Gf~~~~~~  153 (330)
T 3tt2_A          144 QHGYRPVRDI  153 (330)
T ss_dssp             HTTCEEEEEE
T ss_pred             hCCCceEEEE
Confidence            9999987654

>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2

Probab=98.31  E-value=8.7e-07  Score=75.71  Aligned_cols=73  Identities=14%  Similarity=0.140  Sum_probs=65.0

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHc
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFRE  469 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~  469 (542)
                      +..+..|+|||..+. .|.++++.|+.+||.|..++ ..+||||++... +-|+-.|...|++||+.+|+.++++.
T Consensus         7 ~l~G~~~v~TG~l~~-~R~e~~~~i~~~Gg~v~~sVskkt~~LV~g~~~-gsK~~kA~~lgI~Ii~E~~f~~~l~~   80 (92)
T 1l7b_A            7 ALKGLTFVITGELSR-PREEVKALLRRLGAKVTDSVSRKTSYLVVGENP-GSKLEKARALGVPTLTEEELYRLLEA   80 (92)
T ss_dssp             SSTTCEEECSTTTTS-CHHHHHHHHHHTTCEEESCCSSSCCCBEECSSS-STTHHHHHCSSSCCEEHHHHHHHHHH
T ss_pred             CcCCcEEEEecCCCC-CHHHHHHHHHHcCCEEeCcccCCeeEEEeCCCC-ChHHHHHHHcCCcEEeHHHHHHHHHh
Confidence            356789999998877 68999999999999999998 789999999754 58999999999999999999998863

>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}

Probab=98.26  E-value=4.6e-07  Score=89.32  Aligned_cols=86  Identities=15%  Similarity=0.175  Sum_probs=46.4

Q ss_pred             CCeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCc-eeEEEECCCC-CcHH----HHHHHhcC----------CeEeCH
Q 009150          397 KCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGST-STHVVTGKVR-KTLN----FLTALCSG----------AWIVSP  460 (542)
Q Consensus       397 k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~-~THLIt~k~~-RTlK----fL~AIA~G----------~wIVSp  460 (542)
                      ++++|.|++..++..++.+...|+.+||+++++... +||||+.... ....    +-..++.+          ..||+|
T Consensus       162 ~g~~~yl~~~~~~~~~~~l~~~i~~~GG~v~~~l~~~t~hVV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iV~~  241 (264)
T 1z56_C          162 SNRIAYVPRRKISTEDDIIEMKIKLFGGKITDQQSLCNLIIIPYTDPILRKDCMNEVHEKIKEQIKASDTIPKIARVVAP  241 (264)
T ss_dssp             ------------------CHHHHHHHTTSCCCCSSSCSEEECCCSSTTTHHHHSSHHHHTTTTTTTSSSSCCCCCEEECT
T ss_pred             CCeEEEEecCCCchhHHHHHHHHHHcCCEEecccCCCEEEEEeCCCccchHHHHHHHHHHHHhhcccccccCCCCEEecH
Confidence            467888888654444456788899999999988755 5555554311 0122    22333433          499999


Q ss_pred             HHHHHHHHcCCCCCCCCcccCC
Q 009150          461 NWLKESFREGRFVDESSYMLND  482 (542)
Q Consensus       461 sWL~dSlk~Gk~LdEe~YeL~d  482 (542)
                      +||.+|++.|+++||++|.+.+
T Consensus       242 ~Wv~dci~~~~ll~e~~Y~~~~  263 (264)
T 1z56_C          242 EWVDHSINENCQVPEEDFPVVN  263 (264)
T ss_dssp             HHHHHHHTTSCCCSSCCC----
T ss_pred             HHHHHHHHcCCcCCHHHcCCCC
Confidence            9999999999999999997643

>2ft0_A TDP-fucosamine acetyltransferase; GNAT fold acetyltransferase, structural genomics, montreal-K bacterial structural genomics initiative, BSGI; HET: ACO; 1.66A {Escherichia coli} PDB: 2fs5_A*

Probab=98.13  E-value=5.5e-06  Score=78.79  Aligned_cols=72  Identities=8%  Similarity=0.048  Sum_probs=59.4

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      .+|++||.+.+......     ...+.|.+   |+|||+.|+.++++++++.|+..+.+.+..   .|..||+|+||+..
T Consensus       156 ~~g~ivG~~~l~~~~~~-----~~~i~v~~---g~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~lY~k~GF~~~  227 (235)
T 2ft0_A          156 ASGDIRGYVSLRELNAT-----DARIGLLA---GRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVE  227 (235)
T ss_dssp             TTSCEEEEEEEEECSSS-----EEEEEEEE---CTTCHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             CCCcEEEEEEEEecCCC-----ceEEEEEc---CCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCEEe
Confidence            47899999988764322     35667777   999999999999999999999999887754   48999999999987


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      ...
T Consensus       228 ~~~  230 (235)
T 2ft0_A          228 STA  230 (235)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            654

>2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A*

Probab=98.12  E-value=3.2e-06  Score=76.86  Aligned_cols=83  Identities=25%  Similarity=0.355  Sum_probs=62.1

Q ss_pred             eEEEE--cccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCC--CCcHHHH--H--HH---hcCCeEeCHHHHHHH
Q 009150          399 FRIML--MNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKV--RKTLNFL--T--AL---CSGAWIVSPNWLKES  466 (542)
Q Consensus       399 ~rVlf--SG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~--~RTlKfL--~--AI---A~G~wIVSpsWL~dS  466 (542)
                      ++|.+  -++-. ..++.+++++.+.|+.|.+.. +.+||||+.+.  .|.+..|  .  ++   +.+.++|+.+||.+|
T Consensus        14 v~iyive~kmG~-sRr~fL~~la~~kGf~v~~~~S~~VTHVV~E~~s~~~~~~~L~~~~~~l~~~~~~~~lLdisWltec   92 (133)
T 2dun_A           14 VAIYLVEPRMGR-SRRAFLTGLARSKGFRVLDACSSEATHVVMEETSAEEAVSWQERRMAAAPPGCTPPALLDISWLTES   92 (133)
T ss_dssp             EEEEECHHHHCS-HHHHHHHHHHHHHTEEECSSCCTTCCEEEESSCCHHHHHHHHHHHHHHSCTTCCCCEEEEHHHHHHH
T ss_pred             cEEEEecCCcCH-HHHHHHHHHHHhcCCEeccccCCCceEEEecCCCHHHHHHHHHHhhcccCcCCCCcEEeccHHHHHH
Confidence            55555  23333 347789999999999999998 89999999763  3344444  1  22   367899999999999


Q ss_pred             HHcCCCCCCCC-cccCC
Q 009150          467 FREGRFVDESS-YMLND  482 (542)
Q Consensus       467 lk~Gk~LdEe~-YeL~d  482 (542)
                      +++|+.+|++. |.+..
T Consensus        93 m~~g~pV~~e~~~~l~~  109 (133)
T 2dun_A           93 LGAGQPVPVECRHRLEV  109 (133)
T ss_dssp             HHHTSCCCCCTTTSCCC
T ss_pred             HhcCCcCCcccceEeec
Confidence            99999999965 44444

>1ro5_A Autoinducer synthesis protein LASI; alpha-beta-alpha sandwich, phosphopantetheine fold, signalin; 2.30A {Pseudomonas aeruginosa} SCOP: d.108.1.3

Probab=98.10  E-value=8.2e-06  Score=77.65  Aligned_cols=79  Identities=13%  Similarity=-0.010  Sum_probs=67.0

Q ss_pred             CCcEEEEEEeeec-------------------cCCCceeEeeeeeeccCccc----cChHHHHHHHHHHHHHHcCCcEEE
Q 009150          141 DDVVVAAITYQIV-------------------PADTQYAEVPLAAVSSIYQH----KGVGRLLYLELRKRLQSVGIRTIF  197 (542)
Q Consensus       141 ~~~VIg~i~~~i~-------------------~~d~~~aeI~~~AV~~~~Qg----kGiG~~Lv~~l~~~lk~~GI~~I~  197 (542)
                      +|++||++=+...                   |.+..+.||.-|||++++|+    .|+|..|+..+.++++..|+++++
T Consensus        62 ~g~~vGt~Rll~~~~~~~l~~~f~~~~~~~~~p~~~~~~ei~R~aV~~~~r~~~~~~~v~~~L~~~~~~~a~~~g~~~~~  141 (201)
T 1ro5_A           62 DGQVFGCWRILDTTGPYMLKNTFPELLHGKEAPCSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQTLV  141 (201)
T ss_dssp             TTEEEEEEEEEETTSCCHHHHTCGGGGTTCCCCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred             CCeEEEEEecCCCCCCchhhhhhhhhcCCCCCCCCCCEEEeeeeEECchhhccccchHHHHHHHHHHHHHHHHCCCCEEE
Confidence            3789998754431                   11346889999999999998    799999999999999999999999


Q ss_pred             EEccccchhhhhhcCccc--cccc
Q 009150          198 CWGDKESEGFWHKQDTSA--DTAV  219 (542)
Q Consensus       198 l~a~~~A~~Fw~KqGF~~--~~~~  219 (542)
                      +.+...+..||+|.||..  .++.
T Consensus       142 ~~a~~~~~~fy~r~G~~~~~~G~~  165 (201)
T 1ro5_A          142 TVTTVGVEKMMIRAGLDVSRFGPH  165 (201)
T ss_dssp             EEEEHHHHHHHHHTTCEEEESSCC
T ss_pred             EEECHHHHHHHHHcCCCeEECCCC
Confidence            999999999999999975  5543

>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*

Probab=98.02  E-value=3.9e-06  Score=80.31  Aligned_cols=76  Identities=13%  Similarity=0.210  Sum_probs=60.6

Q ss_pred             CeE-EEEcccCChhhHHHHHHHHHHcCcEEeccCCceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCCC
Q 009150          398 CFR-IMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDES  476 (542)
Q Consensus       398 ~~r-VlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdEe  476 (542)
                      +.. ++++++.... ++.+..+|+..||+|+.+...++++|.+...       +...++++|+|+||.||+.+++.+|.+
T Consensus       122 g~~~~~v~~~~~~~-~~~L~~lI~~~GG~v~~~~~~~~iiI~~~~~-------~~~~~~~~V~p~Wi~DsI~~~~llp~~  193 (199)
T 3u3z_A          122 DQPVMFVSPASSPP-VAKLCELVHLCGGRVSQVPRQASIVIGPYSG-------KKKATVKYLSEKWVLDSITQHKVCAPE  193 (199)
T ss_dssp             TSCCEEECTTCSSC-HHHHHHHHHHTTCCBCSSGGGCSEEESCCCS-------CCCTTCEEECHHHHHHHHHHTSCCCGG
T ss_pred             CCeEEEECCCCCCC-HHHHHHHHHHcCCEEeccCCCCEEEEeCCch-------hccCCCcEEChhHHHHHHHcCCcCChH
Confidence            453 5556655444 5789999999999999998888888865322       235789999999999999999999999


Q ss_pred             CcccC
Q 009150          477 SYMLN  481 (542)
Q Consensus       477 ~YeL~  481 (542)
                      +|.+.
T Consensus       194 ~Y~~~  198 (199)
T 3u3z_A          194 NYLLS  198 (199)
T ss_dssp             GGBCC
T ss_pred             hccCC
Confidence            99764

>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3

Probab=98.00  E-value=7.4e-06  Score=78.57  Aligned_cols=89  Identities=12%  Similarity=0.153  Sum_probs=57.1

Q ss_pred             CCCCeEEEEcc-cCChhhHHHHHHHHHHcCcEEeccCCc------eeEE-EECCC--CCcHHHH-HHHhcCCeEeCHHHH
Q 009150          395 NGKCFRIMLMN-IADDSKKVHLTKVIEDLGGAVTSDGST------STHV-VTGKV--RKTLNFL-TALCSGAWIVSPNWL  463 (542)
Q Consensus       395 ~~k~~rVlfSG-~~de~kk~~L~kiIkkLGG~V~~d~~~------~THL-It~k~--~RTlKfL-~AIA~G~wIVSpsWL  463 (542)
                      .-.+.+|+|+| +... .++.+..+|+..||+++.....      +||+ |+...  .+..++- .|...|++||+++||
T Consensus       117 lF~g~~~~~~~~~~~~-~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~~vvv~~~~~~~~~~~~~l~~~~~i~iVs~~Wl  195 (229)
T 1l0b_A          117 LFEGLQIYCCEPFTNM-PKDELERMLQLCGASVVKELPLLTRDTGAHPIVLVQPSAWTEDNDCPDIGQLCKGRLVMWDWV  195 (229)
T ss_dssp             CCTTCEEEECSCCSSS-CHHHHHHHHHHTTCEEECSSSCGGGCCSSCCEEEEC-------------------CEEETHHH
T ss_pred             hhcCceEEEEecCCCC-CHHHHHHHHHHCCCEEeCCcccccccCCCceEEEEcCCccchhhhHHHHHHHcCCeEeehhHH
Confidence            34678999976 4333 3678999999999999988632      5774 44432  1233322 123478999999999


Q ss_pred             HHHHHcCCCCCCCCcccCCch
Q 009150          464 KESFREGRFVDESSYMLNDDD  484 (542)
Q Consensus       464 ~dSlk~Gk~LdEe~YeL~d~~  484 (542)
                      .+|+.+++++++++|.+....
T Consensus       196 ldsI~~~~~~~~~~Y~l~~~~  216 (229)
T 1l0b_A          196 LDSISVYRCRDLDAYLVQNIT  216 (229)
T ss_dssp             HHHHHTTSCCCGGGGBCC---
T ss_pred             HHHHhcCCcCCccceEccccc
Confidence            999999999999999987543

>3pc7_A DNA ligase 3; DNA repair, BRCT domain, protein:protein interactions, XRCC1 domain, DNA binding protein; HET: DNA MSE; 1.65A {Homo sapiens} SCOP: c.15.1.2 PDB: 3pc8_C* 1imo_A* 1in1_A* 3qvg_A*

Probab=97.97  E-value=1.3e-05  Score=68.13  Aligned_cols=69  Identities=23%  Similarity=0.327  Sum_probs=55.8

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC--CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCC
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG--STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFV  473 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~--~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~L  473 (542)
                      =.+.++.+.+-.+..  ..+...+-++||.|..+.  .++||+|+...         ...+..+|+|+||.+|.++|++|
T Consensus        17 Fsg~~~~l~~~v~~~--~~l~RyiiAfgG~v~~~~~~~~vTHvI~~~~---------~~~~~~~V~p~WI~dcI~k~~Ll   85 (88)
T 3pc7_A           17 FTGVRLYLPPSTPDF--SRLRRYFVAFDGDLVQEFDMTSATHVLGSRD---------KNPAAQQVSPEWIWACIRKRRLV   85 (88)
T ss_dssp             STTCEECCCTTSTTH--HHHHHHHHHTTCEECCGGGGGGCSEEESCCT---------TCTTSEEECHHHHHHHHHHTSCC
T ss_pred             hcCeEEEccCCcCch--hhheeeeeecCCEEecccCCCcCeEEecCCC---------cCCCCcEEchHHHHHHHhCCccc
Confidence            346778885544433  468899999999998765  68999998764         37789999999999999999999


Q ss_pred             CC
Q 009150          474 DE  475 (542)
Q Consensus       474 dE  475 (542)
                      ++
T Consensus        86 ~~   87 (88)
T 3pc7_A           86 AP   87 (88)
T ss_dssp             SC
T ss_pred             CC
Confidence            75

>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A

Probab=97.97  E-value=1.3e-05  Score=71.07  Aligned_cols=76  Identities=18%  Similarity=0.246  Sum_probs=63.5

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCC--CCcHHHHHHHhcCCeEeCHHHHHHHHHcCC
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKV--RKTLNFLTALCSGAWIVSPNWLKESFREGR  471 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~--~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk  471 (542)
                      +..+.+|+|||-... .|.++++.|+.+||+|...+ ..|||||++.-  .-.-|+-.|-..|++||+.+||.++...+.
T Consensus        10 ~l~G~~~ViTG~l~~-~R~e~k~~ie~~Ggkv~~sVskkT~~lV~g~~~e~~gsKl~kA~~lgI~IvsE~~l~~~~~~~~   88 (113)
T 2cok_A           10 PLSNMKILTLGKLSR-NKDEVKAMIEKLGGKLTGTANKASLCISTKKEVEKMNKKMEEVKEANIRVVSEDFLQDVSASTK   88 (113)
T ss_dssp             SSSSCEEEECSCCSS-CHHHHHHHHHHTTCEEESCSTTCSEEECCHHHHHHCCHHHHHHHHTTCCEECTHHHHHHHSCCS
T ss_pred             CcCCCEEEEEecCCC-CHHHHHHHHHHCCCEEcCccccCccEEEECCCCCCCChHHHHHHHCCCcEEeHHHHHHHHhhch
Confidence            467789999998765 58899999999999999998 78999999831  135789999999999999999777665553

>1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A*

Probab=97.93  E-value=7.7e-06  Score=80.00  Aligned_cols=72  Identities=6%  Similarity=0.035  Sum_probs=53.1

Q ss_pred             CcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc--c-cchhhhhhcCcccccc
Q 009150          142 DVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD--K-ESEGFWHKQDTSADTA  218 (542)
Q Consensus       142 ~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~--~-~A~~Fw~KqGF~~~~~  218 (542)
                      |+|||.+.+......  ...+..++|+|+|||+|||+.|+.++++.+.    ..+.+++.  + .+..||+|+||.....
T Consensus        62 g~~vG~~~~~~~~~~--~~~~~~l~v~p~~rg~Gig~~Ll~~~~~~~~----~~~~~~~~~~~~~a~~~y~~~Gf~~~~~  135 (318)
T 1p0h_A           62 GPIIGYLNLSPPRGA--GGAMAELVVHPQSRRRGIGTAMARAALAKTA----GRNQFWAHGTLDPARATASALGLVGVRE  135 (318)
T ss_dssp             CCEEEEEEEECC-----CCCEEEEEECGGGCSSSHHHHHHHHHHHHTT----TCCEEEEGGGCHHHHHHHHHTTCEEEEE
T ss_pred             CcEEEEEEEECCCCC--CcEEEEEEECccccCCCHHHHHHHHHHHhhc----CEEEEEEcCCCHHHHHHHHHCCCeeEeE
Confidence            899999877655422  2235567999999999999999999998763    23434433  2 4889999999998875


Q ss_pred             c
Q 009150          219 V  219 (542)
Q Consensus       219 ~  219 (542)
                      .
T Consensus       136 ~  136 (318)
T 1p0h_A          136 L  136 (318)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A

Probab=97.90  E-value=7.6e-06  Score=77.32  Aligned_cols=87  Identities=15%  Similarity=0.144  Sum_probs=61.8

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCc------eeEE-EECCCCCc--HHHH-HHHhcCCeEeCHHHHHH
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGST------STHV-VTGKVRKT--LNFL-TALCSGAWIVSPNWLKE  465 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~------~THL-It~k~~RT--lKfL-~AIA~G~wIVSpsWL~d  465 (542)
                      -.+.+|+|++-.....++.+..+|+..||+++.....      ++|+ |+.....+  .++- .|...|++||+++||.+
T Consensus       116 F~g~~~~~~~~~~~~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~ivi~~~~~~~~~~~~~~~a~~~~~~iV~~~Wi~d  195 (214)
T 1t15_A          116 FRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTEDNGFHAIGQMCEAPVVTREWVLD  195 (214)
T ss_dssp             TTTCEEEECSCCSSSCHHHHHHHHHHTTCEECCSGGGCCCSTTCCEEEEECGGGCSSCGGGGSSTTTCSSCEEEHHHHHH
T ss_pred             cCCCEEEEEecCCCCCHHHHHHHHHHCCCEEecCccccccCCCCccEEEECCCcccchhhHHHHHHhcCCcEEeccHHHH
Confidence            4568999977433233678999999999999987632      1334 34321111  1221 23467899999999999


Q ss_pred             HHHcCCCCCCCCcccCC
Q 009150          466 SFREGRFVDESSYMLND  482 (542)
Q Consensus       466 Slk~Gk~LdEe~YeL~d  482 (542)
                      |+.+++++++++|.+.+
T Consensus       196 si~~~~~l~~~~Y~l~~  212 (214)
T 1t15_A          196 SVALYQCQELDTYLIPQ  212 (214)
T ss_dssp             HHHHTSCCCSGGGBCCC
T ss_pred             hHhhcCcCCCcceeecc
Confidence            99999999999998764

>3p2h_A AHL synthase; acyl-ACP binding, SAM binding, signaling protein-I MTA complex, signaling protein-inhibitor complex; HET: MTA NOO; 2.00A {Burkholderia glumae} PDB: 3p2f_A*

Probab=97.85  E-value=4.8e-05  Score=72.88  Aligned_cols=75  Identities=11%  Similarity=0.070  Sum_probs=60.2

Q ss_pred             CCCcEEEEEEeeeccC--------------------CCceeEeeeeeeccCc-cc----cChHHHHHHHHHHHHHHcCCc
Q 009150          140 DDDVVVAAITYQIVPA--------------------DTQYAEVPLAAVSSIY-QH----KGVGRLLYLELRKRLQSVGIR  194 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~--------------------d~~~aeI~~~AV~~~~-Qg----kGiG~~Lv~~l~~~lk~~GI~  194 (542)
                      ++|++||++  ++.|.                    +..+.||.-|||+++| |+    .+.|..|+..+.+++++.|++
T Consensus        60 ~~g~~vgt~--Rll~~~~~~~l~~~f~~l~~~~~p~~~~~~EisR~aV~~~~rR~~~g~~~~~~~L~~~~~~~a~~~g~~  137 (201)
T 3p2h_A           60 ANGEICGCA--RLLPTTRPYLLQEVFPHLLADEAPRSAHVWELSRFAATPEEGADAGSLAWSVRPMLAAAVECAARRGAR  137 (201)
T ss_dssp             TTSCEEEEE--EEEETTSCCHHHHTCGGGCSSCCCCCTTEEEEEEEEEC----------CTTHHHHHHHHHHHHHHTTCS
T ss_pred             CCCeEEEEE--EeccccCCccccccChhhcCCccCCCCCEEEEEEEEEcchhcccccccChHHHHHHHHHHHHHHHCCCC
Confidence            467899987  44442                    2468999999999999 64    346999999999999999999


Q ss_pred             EEEEEccccchhhhhhcCcccc
Q 009150          195 TIFCWGDKESEGFWHKQDTSAD  216 (542)
Q Consensus       195 ~I~l~a~~~A~~Fw~KqGF~~~  216 (542)
                      ++++.+....+.||+|.||...
T Consensus       138 ~~~~~aq~~~~~~y~rlG~~~~  159 (201)
T 3p2h_A          138 QLIGVTFCSMERMFRRIGVHAH  159 (201)
T ss_dssp             EEEEEEEHHHHHHHHHHTCEEE
T ss_pred             EEEEEECHHHHHHHHHcCCCeE
Confidence            9999999999999999999853

>3shp_A Putative acetyltransferase STHE_0691; PSI-biology, midwest center for structural genomics, MCSG; HET: SRT; 2.21A {Sphaerobacter thermophilus}

Probab=97.81  E-value=6.1e-05  Score=68.23  Aligned_cols=97  Identities=11%  Similarity=-0.062  Sum_probs=69.7

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeee----eeeccCccccChHHHHHHHHHHHHH-HcCCcEEEEEccc---cchhhhhhc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPL----AAVSSIYQHKGVGRLLYLELRKRLQ-SVGIRTIFCWGDK---ESEGFWHKQ  211 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~----~AV~~~~QgkGiG~~Lv~~l~~~lk-~~GI~~I~l~a~~---~A~~Fw~Kq  211 (542)
                      +++++||.+.+  .+ ....++|..    +.++++|||    +.++..+++++. ..|+.+|.+.+..   .|..+|+|+
T Consensus        68 ~~~~~iG~~~l--~~-~~~~~eig~~~~~~i~~~~~~G----~ea~~~ll~~af~~~~~~~i~~~v~~~N~~s~~l~ek~  140 (176)
T 3shp_A           68 SDEAVVGSCRI--EF-GKQTASLRFHMAPWLDDADVLR----AEALELVVPWLRDEHELLVITVEIAADEQRTLAAAEAA  140 (176)
T ss_dssp             TTCCEEEEEEE--EE-CSSEEEEEEEECTTCSCHHHHH----HHHHHHHHHHHHHHSCCSEEEEEEETTCHHHHHHHHHT
T ss_pred             CCCcEEEEEEE--ec-CCCEEEEEEeecceecChhHhh----HHHHHHHHHHHHhhCCeEEEEEEEcCCCHHHHHHHHHC
Confidence            57899999988  22 235788877    555999999    777777777775 4799999776655   399999999


Q ss_pred             CccccccccccccCCCCCCCceeEEE-Eecccch
Q 009150          212 DTSADTAVSLKFCFPVKPCEKSSLVT-VNRSLEA  244 (542)
Q Consensus       212 GF~~~~~~~~~~~~~~~~c~ea~lm~-l~~~~~~  244 (542)
                      ||+..+..+..... +|......+|. |..+.++
T Consensus       141 GF~~~G~~r~~~~~-~g~~~D~~~~~ll~~e~~~  173 (176)
T 3shp_A          141 GLKAAVRMREAIAR-AGHRVDLLIYQAVDPKVEA  173 (176)
T ss_dssp             TCEEEEEEEEEEEE-TTEEEEEEEEEEECTTC--
T ss_pred             CCEEEEEeeeeEEe-CCEEEEEEEEEEcchhhhh
Confidence            99999988554333 33244566777 7666543

>1kzf_A Acyl-homoserinelactone synthase ESAI; alpha-beta, autoinducer synthase, quorum sensing, bacterial pathogenesis, ligase; 1.80A {Pantoea stewartii subsp} SCOP: d.108.1.3 PDB: 1k4j_A

Probab=97.71  E-value=4.5e-05  Score=74.64  Aligned_cols=75  Identities=11%  Similarity=0.156  Sum_probs=64.6

Q ss_pred             CCcEEEEEEeeeccCC--------------------CceeEeeeeeeccCccccC-------hHHHHHHHHHHHHHHcCC
Q 009150          141 DDVVVAAITYQIVPAD--------------------TQYAEVPLAAVSSIYQHKG-------VGRLLYLELRKRLQSVGI  193 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d--------------------~~~aeI~~~AV~~~~QgkG-------iG~~Lv~~l~~~lk~~GI  193 (542)
                      +|++||++  ++.|.+                    .. .||.-|||+++ |++|       +|..|+..+.++++..|+
T Consensus        80 ~g~~Vgt~--RLlp~~~~~~l~~~f~~~~~~~~~p~~~-~Ei~R~aV~~~-r~~g~~~~~~~v~~~L~~al~~~a~~~G~  155 (230)
T 1kzf_A           80 EGQLVCSV--RFTSLDRPNMITHTFQHCFSDVTLPAYG-TESSRFFVDKA-RARALLGEHYPISQVLFLAMVNWAQNNAY  155 (230)
T ss_dssp             TTEEEEEE--EEEETTSCCCCCCCTHHHHTTSCCCSSC-EEEEEEEECHH-HHHHHHCTTCCHHHHHHHHHHHHHHHTTC
T ss_pred             CCeEEEEE--eecCCCcchhhcCcChhhcCCccCCCCC-eEEEEEEEccc-cccccccchhHHHHHHHHHHHHHHHHCCC
Confidence            67899985  666532                    12 69999999999 8886       999999999999999999


Q ss_pred             cEEEEEccccchhhhhhcCccc--cccc
Q 009150          194 RTIFCWGDKESEGFWHKQDTSA--DTAV  219 (542)
Q Consensus       194 ~~I~l~a~~~A~~Fw~KqGF~~--~~~~  219 (542)
                      .++++++...++.||+|.||..  .++.
T Consensus       156 ~~l~~~aq~~~~~fy~r~G~~~~~~G~~  183 (230)
T 1kzf_A          156 GNIYTIVSRAMLKILTRSGWQIKVIKEA  183 (230)
T ss_dssp             SEEEEEEEHHHHHHHHHHCCCCEEEEEE
T ss_pred             CEEEEEeCHHHHHHHHHcCCCeEECCCC
Confidence            9999999999999999999975  5554

>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A

Probab=97.65  E-value=2.2e-05  Score=74.72  Aligned_cols=81  Identities=12%  Similarity=0.098  Sum_probs=57.2

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC------------------------CceeEEEECCCCCcHHHHHHH
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG------------------------STSTHVVTGKVRKTLNFLTAL  451 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~------------------------~~~THLIt~k~~RTlKfL~AI  451 (542)
                      -.+..|++++-.....++.+.++|+..||+++...                        ..|||+|+..+.+-.+.-.+.
T Consensus       105 F~g~~~~l~~~~~~~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~~t~~iv~~~~~~~~~~~~~  184 (210)
T 2nte_A          105 FDGCYFYLWGTFKHHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYEDLCNYHPERVR  184 (210)
T ss_dssp             TTTCEEEECSCCSSSCHHHHHHHHHHTTCEEESSCCCGGGCGGGSSCCCCTTSCTTCGGGTCCEEEEECSCSSCCCSCSE
T ss_pred             cCceEEEEeccCCCCCHHHHHHHHHHCCCEEEecCCCCccccccccceeeeccCCCcccccceEEEEeccccccCHHHHh
Confidence            45689999884333336789999999999998521                        357999876542110000122


Q ss_pred             hcCCeEeCHHHHHHHHHcCCCCCCC
Q 009150          452 CSGAWIVSPNWLKESFREGRFVDES  476 (542)
Q Consensus       452 A~G~wIVSpsWL~dSlk~Gk~LdEe  476 (542)
                      ..++++|+++||.||+.++++++.+
T Consensus       185 ~~~v~~V~~~Wl~dcI~~~~llp~~  209 (210)
T 2nte_A          185 QGKVWKAPSSWFIDCVMSFELLPLD  209 (210)
T ss_dssp             ETTEEEEEHHHHHHHHHHTSCCCSC
T ss_pred             ccCcccccHHHHHHHHHhCeeccCC
Confidence            3567999999999999999999865

>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A

Probab=97.62  E-value=8.8e-05  Score=70.99  Aligned_cols=87  Identities=14%  Similarity=0.135  Sum_probs=64.8

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCc---eeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCC
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGST---STHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGR  471 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~---~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk  471 (542)
                      --++.+|++++..... ++.+..+|+..||.|......   -+|+|........++-.++..|++||+++||.+|+..++
T Consensus       115 lF~g~~~~~~~~~~~~-~~~l~~li~~~GG~v~~~~~~~~~~~~ivI~~~~d~~~~~~~~~~~i~vvs~eWi~~sI~~q~  193 (209)
T 2etx_A          115 LLEGYEIYVTPGVQPP-PPQMGEIISCCGGTYLPSMPRSYKPQRVVITCPQDFPHCSIPLRVGLPLLSPEFLLTGVLKQE  193 (209)
T ss_dssp             TTTTCEEEECTTCSSC-HHHHHHHHHHTTCEECSSCCCSCCTTEEEECCGGGGGGCHHHHHHTCCEECTHHHHHHHHHTC
T ss_pred             CcCCcEEEEeCCCCCC-HHHHHHHHHHCCCEEECCCCCCCCCceEEEECcccHHHHHHHHHCCCeEEcHHHHHHHHHhcc
Confidence            3456889998876544 467999999999999987632   256666433222333456778999999999999999977


Q ss_pred             CCCCCCcccCCc
Q 009150          472 FVDESSYMLNDD  483 (542)
Q Consensus       472 ~LdEe~YeL~d~  483 (542)
                      + |++.|.+..+
T Consensus       194 l-d~e~y~l~~~  204 (209)
T 2etx_A          194 A-KPEAFVLSPL  204 (209)
T ss_dssp             C-CGGGGBCCTT
T ss_pred             c-ChHHheecCC
Confidence            5 9999988654

>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B

Probab=97.59  E-value=0.00013  Score=72.42  Aligned_cols=84  Identities=13%  Similarity=0.079  Sum_probs=63.9

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-----------CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHH
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-----------STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLK  464 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-----------~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~  464 (542)
                      -++.+|++++.....-++.+..+++.+||.++...           ..+++||+.....+.++.+|...|++||+.+||.
T Consensus       156 F~G~~I~i~~~~~~~~~~~~~~Il~~~Ga~vv~~~~s~~~~~d~~~~~~~viv~d~~~~~~~~~~a~~~~i~iVs~EWv~  235 (259)
T 1kzy_C          156 FQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQLPVVSQEWVI  235 (259)
T ss_dssp             TTTCEEEEEESCTTTTHHHHHHHHHHTTCSEEEEEESSSSCCCSCGGGCSEEEECTTCCHHHHHHHHHHTCCEECHHHHH
T ss_pred             CCCeEEEEecCCCCCHHHHHHHHHHhcCCEEEeccccchhhhhccCCCCeEEEECCCChHHHHHHHHhcCCCEecHHHHH
Confidence            46789999876533224567789999999887543           1244556655445677788999999999999999


Q ss_pred             HHHHcCCCCCCCCcc
Q 009150          465 ESFREGRFVDESSYM  479 (542)
Q Consensus       465 dSlk~Gk~LdEe~Ye  479 (542)
                      +|+..|+.+|++.|.
T Consensus       236 ~sI~~~~ll~~~~hp  250 (259)
T 1kzy_C          236 QCLIVGERIGFKQHP  250 (259)
T ss_dssp             HHHHHTSCCCTTSSG
T ss_pred             HHHHhCCcCCCCcCc
Confidence            999999999998663

>1bob_A HAT1, histone acetyltransferase; histone modification, acetyl coenzyme A binding-protein; HET: ACO; 2.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1

Probab=97.50  E-value=0.00032  Score=72.24  Aligned_cols=103  Identities=16%  Similarity=0.132  Sum_probs=67.5

Q ss_pred             HHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeecc--CC----------CceeEe
Q 009150           95 VLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVP--AD----------TQYAEV  162 (542)
Q Consensus        95 ~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~--~d----------~~~aeI  162 (542)
                      +..++.+--+.+-++-+.|-.   |..-  |.....++++..   .++.+||.++...++  ++          ..-..|
T Consensus       146 ~~~L~~r~q~~~l~fIE~~~~---id~d--d~~w~~~~v~e~---~~~~ivG~~t~y~~~~~~~~~~f~~~~~~~~R~rI  217 (320)
T 1bob_A          146 ARRMHRRVQIFSLLFIEAANY---IDET--DPSWQIYWLLNK---KTKELIGFVTTYKYWHYLGAKSFDEDIDKKFRAKI  217 (320)
T ss_dssp             HHHHHHHHTHHHHHHSTTCCC---CCTT--CTTEEEEEEEET---TTCCEEEEEEEEEECCC---------CCCCEEEEE
T ss_pred             HHHHHHHHHHHHHhcccCCcc---cCcc--CCCceEEEEEEc---cCCcEEEEEEEEeeeccCCcccccccccCCceEEE
Confidence            455555433334444444443   3332  455555655542   367999988877554  44          457789


Q ss_pred             eeeeeccCccccChHHHHHHHHH-HHHHHcCCcEEEEEccccchhh
Q 009150          163 PLAAVSSIYQHKGVGRLLYLELR-KRLQSVGIRTIFCWGDKESEGF  207 (542)
Q Consensus       163 ~~~AV~~~~QgkGiG~~Lv~~l~-~~lk~~GI~~I~l~a~~~A~~F  207 (542)
                      .+|.|.|.|||+|+|++|++++. .+++..|+..|-+---  ++.|
T Consensus       218 sq~lVlPpyQgkGiG~~Ll~~i~~~~~~~~~i~~ItVeDP--~e~F  261 (320)
T 1bob_A          218 SQFLIFPPYQNKGHGSCLYEAIIQSWLEDKSITEITVEDP--NEAF  261 (320)
T ss_dssp             EEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEEEESSC--CHHH
T ss_pred             EEEEEcHHHhCCCHHHHHHHHHHHHHHhcCCCceEEEECc--hHHH
Confidence            99999999999999999999999 7777888877644322  4544

>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*

Probab=96.50  E-value=0.0052  Score=60.17  Aligned_cols=86  Identities=12%  Similarity=0.237  Sum_probs=65.8

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-----CceeEEEECCCC-----CcHHHHHHHhcCCeEeCHHHHHH
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-----STSTHVVTGKVR-----KTLNFLTALCSGAWIVSPNWLKE  465 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-----~~~THLIt~k~~-----RTlKfL~AIA~G~wIVSpsWL~d  465 (542)
                      -.+.+|+|++-  ....+.++.+|+.-||+|....     ...||+++....     ...++..+...|++||+++||.+
T Consensus       136 F~g~~v~l~~~--~~~~~~l~~ii~agGg~vl~~~~~~~~~~~t~~~vd~~~~~~~~~~~~~~~~~~~~i~~v~~ewlld  213 (235)
T 3al2_A          136 FSGWKVILHVD--QSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDLNKLKPDDSGVNIAEAAAQNVYCLRTEYIAD  213 (235)
T ss_dssp             TTTCEEEEECC--HHHHHHHHHHHHHTTCEECSSCCGGGGGGCSEEEECC--------CCCHHHHHHTTCEEEETHHHHH
T ss_pred             CCCcEEEEecC--CCcHHHHHHHHHcCCcEEecCCCCCccccCceEEEecccCCccchhHHHHHHHHcCCcEEcHHHHHH
Confidence            45678888764  3335679999999999998653     457898876310     11357777789999999999999


Q ss_pred             HHHcCCCCCCCCcccCCc
Q 009150          466 SFREGRFVDESSYMLNDD  483 (542)
Q Consensus       466 Slk~Gk~LdEe~YeL~d~  483 (542)
                      ++...++.+.+.|.+...
T Consensus       214 ~i~~~~~~~~~~y~l~~~  231 (235)
T 3al2_A          214 YLMQESPPHVENYCLPEA  231 (235)
T ss_dssp             HHHCSSCCCHHHHBCGGG
T ss_pred             HHhcCCCCChhheEcccc
Confidence            999999999999987653

>3dns_A Ribosomal-protein-alanine acetyltransferase; N-terminal domain of ribosomal-protein-alanine acetyltransfe MCSG, PSI; 2.10A {Clostridium acetobutylicum}

Probab=96.39  E-value=0.018  Score=52.43  Aligned_cols=99  Identities=9%  Similarity=0.011  Sum_probs=75.3

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccC---hHHHHHHHHHHHHH-HcCCcEEEEEccc-cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKG---VGRLLYLELRKRLQ-SVGIRTIFCWGDK-ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkG---iG~~Lv~~l~~~lk-~~GI~~I~l~a~~-~A~~Fw~KqGF~  214 (542)
                      +++++||.+.+.-.-..-+.|+|..+-- ++  |+|   +|+.-+.-+.+++= ++++.+|.+.++. .|...|+|+||.
T Consensus        27 ~~~~~IG~i~i~~Id~~nr~a~i~I~Ig-k~--gkG~~~ygtEAl~l~l~y~F~elnlhKi~l~v~~~~ai~~yeKlGF~  103 (135)
T 3dns_A           27 KYGITIGRIFIVDLNKDNRFCMFRMKIY-KQ--GKSINTYIKEILSVFMEFLFKSNDINKVNIIVDEEVSTQPFVELGFA  103 (135)
T ss_dssp             TTCCEEEEEEEEEEETTTTEEEEEEEEC-CC--SSCCHHHHHHHHHHHHHHHHHHSCCSEEEEEEETTSCSHHHHHTTCE
T ss_pred             CCCCEEEEEEEEEeccccCEEEEEEEEe-eC--CCChHHHHHHHHHHHHHHHHHhcCceEEEEEEecHHHHHHHHHcCCe
Confidence            4789999988866654557888776655 55  999   99999999999886 5899999776665 599999999999


Q ss_pred             ccccccccccCCCCCCCceeEEE-Eeccc
Q 009150          215 ADTAVSLKFCFPVKPCEKSSLVT-VNRSL  242 (542)
Q Consensus       215 ~~~~~~~~~~~~~~~c~ea~lm~-l~~~~  242 (542)
                      ..+.++... |-+|.+-..-+|- |..+.
T Consensus       104 ~EG~lR~~i-~~~G~y~D~i~mgil~~E~  131 (135)
T 3dns_A          104 FEGIINKSI-IEKNVLKDEFLFGMDYKNY  131 (135)
T ss_dssp             EEEEEEEEE-EETTEEEEEEEEEEEHHHH
T ss_pred             EeeeeeeeE-EECCEEeeehhhhhcHHHH
Confidence            999886654 3333344466666 65443

>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}

Probab=96.20  E-value=0.011  Score=57.29  Aligned_cols=83  Identities=13%  Similarity=0.090  Sum_probs=60.2

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCc--------------eeEEEECCCCCcHHHHHHHhcCCeEeCH
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGST--------------STHVVTGKVRKTLNFLTALCSGAWIVSP  460 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~--------------~THLIt~k~~RTlKfL~AIA~G~wIVSp  460 (542)
                      --++.+|++|+..... ++.+..+|+..||.|....+.              -..||+.. .-+..+..++..|++|+++
T Consensus       122 LF~G~~f~it~~~~~~-~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~~~~~~ivis~~-~d~~~~~~~~~~~~~v~s~  199 (219)
T 3sqd_A          122 LFKAKYFYITPGICPS-LSTMKAIVECAGGKVLSKQPSFRKLMEHKQNSSLSEIILISCE-NDLHLCREYFARGIDVHNA  199 (219)
T ss_dssp             TTTTEEEEECTTCSSC-HHHHHHHHHHTTCEEESSCCCHHHHHHHHHCTTSCEEEEEECG-GGGGGGHHHHHTTCCCEET
T ss_pred             ccCCcEEEEeCCCCCC-HHHHHHHHHHCCCEEECCCCchHHhhhhhcccCCCCEEEEecc-cHHHHHHHHHHCCCcEEeH
Confidence            3567899998855444 578999999999999987522              23455543 2233344456789999999


Q ss_pred             HHHHHHHHcCCCCCCCCccc
Q 009150          461 NWLKESFREGRFVDESSYML  480 (542)
Q Consensus       461 sWL~dSlk~Gk~LdEe~YeL  480 (542)
                      +||.+|.-.+++ |.+.|.+
T Consensus       200 E~il~~Il~q~l-d~~~~~~  218 (219)
T 3sqd_A          200 EFVLTGVLTQTL-DYESYKF  218 (219)
T ss_dssp             HHHHHHHHHTCC-CTTTSBC
T ss_pred             HHHHHHHHheee-cchhccc
Confidence            999999987765 7777765

>2l42_A DNA-binding protein RAP1; BRCT domain, protein binding; NMR {Saccharomyces cerevisiae}

Probab=95.91  E-value=0.0036  Score=54.33  Aligned_cols=66  Identities=17%  Similarity=0.317  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHcCcEEeccCCc---eeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCCCCcccCCchhh
Q 009150          412 KVHLTKVIEDLGGAVTSDGST---STHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYV  486 (542)
Q Consensus       412 k~~L~kiIkkLGG~V~~d~~~---~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdEe~YeL~d~~~e  486 (542)
                      .++|..+|.+.||.|....+.   -.+.|+....-|         +.+.|+|.||.+|...+.+|+-++|.+.-.+.+
T Consensus        32 ~d~L~~lI~~nGG~Vl~~lP~~s~~~~yVVSpyN~t---------~LpTVtpTYI~aC~~~nTLLnv~~YLvp~d~~~  100 (106)
T 2l42_A           32 IDQLARLIRANGGEVLDSKPRESKENVFIVSPYNHT---------NLPTVTPTYIKACCQSNSLLNMENYLVPYDNLE  100 (106)
T ss_dssp             HHHHHHHHHTTTSCCCEECCCCCSSCCCCBCTTCCC---------SSSBCCTTHHHHHHHSTTSCGGGGCCBCSCC--
T ss_pred             HHHHHHHHHhcCcEEhhhCcccccCCeEEEeCCCCC---------CCccccHHHHHHHHhcCceecccccccCchhhc
Confidence            467999999999999988621   246677766655         899999999999999999999999998766543

>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}

Probab=95.89  E-value=0.0094  Score=48.81  Aligned_cols=38  Identities=13%  Similarity=0.224  Sum_probs=32.4

Q ss_pred             CCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          504 PGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       504 ~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      ...+|+|+.||+++...++++.|+++|+.+||++...+
T Consensus         4 ~~~~f~g~~~~i~g~~~~~~~~l~~~i~~~GG~~~~~~   41 (92)
T 4id3_A            4 SSKIFKNCVIYINGYTKPGRLQLHEMIVLHGGKFLHYL   41 (92)
T ss_dssp             --CTTTTCEEEECSCCSSCHHHHHHHHHHTTCEEESSC
T ss_pred             cccccCCEEEEEeCCCCcCHHHHHHHHHHCCCEEEEEe
Confidence            35799999999998767789999999999999998754

>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*

Probab=95.77  E-value=0.016  Score=56.82  Aligned_cols=76  Identities=12%  Similarity=0.071  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcccC-C-h----------hhHHHHHHHHHHcCcEE--eccC-CceeEEEECCCCCcHHHHHHHhcCCeEeC
Q 009150          395 NGKCFRIMLMNIA-D-D----------SKKVHLTKVIEDLGGAV--TSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVS  459 (542)
Q Consensus       395 ~~k~~rVlfSG~~-d-e----------~kk~~L~kiIkkLGG~V--~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVS  459 (542)
                      --++.+|+++.-. . .          +..+.+..+++.+||.+  +.+. ...+|+|.... +.    .+...+++||+
T Consensus       151 Lf~g~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~Ga~~~~v~~~~~~~~d~v~~~~-~~----~~~~~~~~iV~  225 (241)
T 2vxb_A          151 PLFGKKILFIIPEAKSWQKKIENTEQGQKALAHVYHALALGADVEIRPNVAHLECDLILTMD-GN----IVDETNCPVVD  225 (241)
T ss_dssp             TTTTCEEEECCCC------------CHHHHHHHHHHHHHTTCEEECCSCCSSCCCSEEECSS-SC----CCSSCSSCEEC
T ss_pred             CCCCcEEEEEeCCCcccccccccccccchHHHHHHHHHHcCCceecccccccCCccEEEECC-cc----ccccCCCCEec
Confidence            3567888886432 1 1          12367899999999999  4333 34567776543 22    25678999999


Q ss_pred             HHHHHHHHHcCCCCCC
Q 009150          460 PNWLKESFREGRFVDE  475 (542)
Q Consensus       460 psWL~dSlk~Gk~LdE  475 (542)
                      ++||.+|+..|+.+|.
T Consensus       226 ~eWv~~~i~~g~~l~~  241 (241)
T 2vxb_A          226 PEWIVECLISQSDIST  241 (241)
T ss_dssp             HHHHHHHHHHTSCTTC
T ss_pred             HHHHHHHHHhceecCC
Confidence            9999999999999873

>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*

Probab=95.55  E-value=0.0022  Score=71.90  Aligned_cols=75  Identities=13%  Similarity=0.138  Sum_probs=0.0

Q ss_pred             CCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150          394 SNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREG  470 (542)
Q Consensus       394 s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~G  470 (542)
                      ++..+..|+|||.... .|.++++.|+.+||+|..++ .+|++||++... .-|+-.|...|++||+.+|+.+.++.+
T Consensus       586 ~~l~G~~~v~TG~l~~-~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~-gsKl~KA~~lgI~Ii~E~~f~~~l~~~  661 (667)
T 1dgs_A          586 DLLSGLTFVLTGELSR-PREEVKALLGRLGAKVTDSVSRKTSYLVVGENP-GSKLEKARALGVAVLTEEEFWRFLKEK  661 (667)
T ss_dssp             ------------------------------------------------------------------------------
T ss_pred             cccCCCEEEEeCCCCC-CHHHHHHHHHHcCCEEcCcccCCeeEEEECCCC-ChHHHHHHHCCCeEEeHHHHHHHHhcC
Confidence            3467889999998876 68899999999999999998 789999999743 478889999999999999999988765

>2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens}

Probab=95.21  E-value=0.026  Score=47.06  Aligned_cols=37  Identities=16%  Similarity=0.305  Sum_probs=32.6

Q ss_pred             CCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEecc
Q 009150          504 PGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK  540 (542)
Q Consensus       504 ~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~  540 (542)
                      ...+|+|+.||+++...++++.|+++|+++||++...
T Consensus         9 ~~~lF~g~~~~isg~~~~~~~~L~~~i~~~GG~~~~~   45 (97)
T 2ebw_A            9 SSTIFSGVAIYVNGYTDPSAEELRKLMMLHGGQYHVY   45 (97)
T ss_dssp             CCCTTTTCEEEECSSCSSCHHHHHHHHHHTTCEECSS
T ss_pred             CCCCCCCeEEEEeCCCcccHHHHHHHHHHcCCEEeee
Confidence            4679999999999877788999999999999998653

>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*

Probab=95.19  E-value=0.0073  Score=64.96  Aligned_cols=97  Identities=11%  Similarity=0.099  Sum_probs=60.1

Q ss_pred             HHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeeccCccc
Q 009150           94 DVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQH  173 (542)
Q Consensus        94 d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~Qg  173 (542)
                      |+..|..    ++...++.-..++||+|.       ++..|.+.++ ++  .+   .+++| +...+|+.-|||+++|||
T Consensus       324 D~~~L~~----LI~~~~~~~Lv~~~le~~-------~i~~~~v~e~-~~--aa---aiv~~-~~~~aeL~kfaV~~~~~g  385 (460)
T 3s6g_A          324 DLGRLDN----LVKAAFGRPAVEGYWDRL-------RVDRAFVTES-YR--AA---AITTR-LDGWVYLDKFAVLDDARG  385 (460)
T ss_dssp             CHHHHHH----HHHHHSSSCBCTTHHHHC-------CCSEEEEETT-SS--EE---EEEEE-ETTEEEEEEEEECHHHHH
T ss_pred             CHHHHHH----HHHHHcCcccHHHHHhhc-------CcceEEEecC-CC--EE---EEEec-CCCCeEEEEEEEChhhhc
Confidence            4555544    444444433335666652       2444444443 33  22   23344 346999999999999999


Q ss_pred             cChHHHHHHHHHHHHHHcCCcEEEEEccc-----------cchhhhhhcCcc
Q 009150          174 KGVGRLLYLELRKRLQSVGIRTIFCWGDK-----------ESEGFWHKQDTS  214 (542)
Q Consensus       174 kGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-----------~A~~Fw~KqGF~  214 (542)
                      .|+|..|++++++..     .+ ++|..+           -|.|+|++.||.
T Consensus       386 ~g~gd~l~~~i~~~~-----~~-L~Wrsr~~n~~~~Wyf~~s~G~~~~~~~~  431 (460)
T 3s6g_A          386 EGLGRTVWNRMVDYA-----PQ-LIWRSRTNNPVNGFYFEECDGAVRRDEWT  431 (460)
T ss_dssp             HTHHHHHHHHHHHHC-----SS-EEEEEETTCTTHHHHHHHCSEEEECSSEE
T ss_pred             CCHHHHHHHHHHHhC-----Cc-eEEEeCCCCCccceEEeeeeEEEEcCCcE
Confidence            999999999999874     33 455433           266777776664

>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}

Probab=95.06  E-value=0.0039  Score=69.97  Aligned_cols=73  Identities=11%  Similarity=0.083  Sum_probs=0.0

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHH
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFR  468 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk  468 (542)
                      +..+..|+|||..+.-.|.++++.|+.+||+|..++ .+|++||++... .-|+-.|...|++||+.+|+.+.++
T Consensus       597 ~l~G~~~v~TG~l~~~~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~-gsKl~KA~~lgI~Ii~E~~f~~~l~  670 (671)
T 2owo_A          597 PFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA-GSKLAKAQELGIEVIDEAEMLRLLG  670 (671)
T ss_dssp             ---------------------------------------------------------------------------
T ss_pred             cccCcEEEEcCCCCCCCHHHHHHHHHHcCCEEeCcccCceeEEEECCCC-ChHHHHHHHCCCcEEcHHHHHHHhc
Confidence            456889999998876557889999999999999998 789999999743 4788899999999999999988763

>4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A*

Probab=93.11  E-value=0.15  Score=53.74  Aligned_cols=58  Identities=17%  Similarity=0.227  Sum_probs=50.5

Q ss_pred             CCCcEEEEEEeeecc---CCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEE
Q 009150          140 DDDVVVAAITYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIF  197 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~  197 (542)
                      ..+++||.|+.+...   .+.  ..+||-|+||+.++|+||++..|++|+..++...||-..+
T Consensus       108 ~~~kLVgfIsaiP~~irv~~~~~~~~eINFLCVHKklRsKrlAPvLIkEitRR~n~~gI~qAv  170 (385)
T 4b14_A          108 ASNKLIGFISAIPTDICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAI  170 (385)
T ss_dssp             TTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTTTCCEEE
T ss_pred             cCCeEEEEEeeeEEEEEEeceEeeeEEEEEEEEehhHhccCccHHHHHHHHHHhhccCceEEE
Confidence            467999999988765   222  7899999999999999999999999999999999976653

>1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5

Probab=92.60  E-value=0.095  Score=46.57  Aligned_cols=39  Identities=23%  Similarity=0.405  Sum_probs=32.8

Q ss_pred             CCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          503 RPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       503 ~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      .+..+|+|+.||+.+.....++.|+.+|+.+||+++..|
T Consensus        36 ~~~~lF~g~~i~i~G~~~~~~~~L~~~i~~~Gg~v~~~l   74 (132)
T 1wf6_A           36 APEDLLDGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQL   74 (132)
T ss_dssp             CCTTTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEESSC
T ss_pred             ccccccCCEEEEEECCChHHHHHHHHHHHHCCCEEeCcC
Confidence            356799999999997655567889999999999998754

>2ep8_A Pescadillo homolog 1; A/B/A 3 layers, nucleolus, ribosome biogenesis, DNA damage, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.50  E-value=0.13  Score=44.07  Aligned_cols=34  Identities=32%  Similarity=0.548  Sum_probs=29.4

Q ss_pred             CCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEec
Q 009150          504 PGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSS  539 (542)
Q Consensus       504 ~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~  539 (542)
                      ...||+|++|||...+  +++.|+.+|+++||+|..
T Consensus         9 ~~~LF~g~~F~i~~e~--p~~~le~~I~~~GG~v~~   42 (100)
T 2ep8_A            9 HKKLFEGLKFFLNREV--PREALAFIIRSFGGEVSW   42 (100)
T ss_dssp             SCCTTSSCEEECCSSS--CHHHHHHHHHHTTCEEEC
T ss_pred             hHHHcCCcEEEEecCC--CHHHHHHHHHHcCCEEEe
Confidence            3679999999998653  589999999999999875

>4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}

Probab=92.16  E-value=0.53  Score=44.86  Aligned_cols=96  Identities=17%  Similarity=0.302  Sum_probs=68.5

Q ss_pred             CCeEEEEcccCChh--hHHHHHHHHHHcCcEEeccC--CceeEEEECCC---CCcHHHHHHHhcCCeEeCHHHHHHHHHc
Q 009150          397 KCFRIMLMNIADDS--KKVHLTKVIEDLGGAVTSDG--STSTHVVTGKV---RKTLNFLTALCSGAWIVSPNWLKESFRE  469 (542)
Q Consensus       397 k~~rVlfSG~~de~--kk~~L~kiIkkLGG~V~~d~--~~~THLIt~k~---~RTlKfL~AIA~G~wIVSpsWL~dSlk~  469 (542)
                      .++.|++--+.+-.  ..-++.+.+...|+.-...-  -++||+|+...   .....++.|--..++||.|+|+.+|--.
T Consensus       163 sgitvclgpldplkeisdlqisqclshigarplqrhvaidtthfvcndldneesneelirakhnnipivrpewvraceve  242 (290)
T 4gns_A          163 SGITVCLGPLDPLKEISDLQISQCLSHIGARPLQRHVAIDTTHFVCNDLDNEESNEELIRAKHNNIPIVRPEWVRACEVE  242 (290)
T ss_dssp             TTCCEEECCCCGGGTCCHHHHHHHHHHTTCCCCBSSCCTTCCEEECSCCTTCTTCHHHHHHHHTTCCEECTHHHHHHHHT
T ss_pred             cCceEEecCCChhhhhhhccHHHHHHHhCCchhhheeeeecceeeecCCCcccchHHHHhhhccCCCccCHHHHHHHhhh
Confidence            34566665444211  01256778888888755442  68999999863   4568889999999999999999999999


Q ss_pred             CCCCCCCCcccCCch-hhhhcCCC
Q 009150          470 GRFVDESSYMLNDDD-YVLKYRSE  492 (542)
Q Consensus       470 Gk~LdEe~YeL~d~~-~e~~~g~~  492 (542)
                      .+++....|-+.... ..+.|.|+
T Consensus       243 krivgvrgfyldadqsilksytfp  266 (290)
T 4gns_A          243 KRIVGVRGFYLDADQSILKSYTFP  266 (290)
T ss_dssp             TSCCCSGGGBTTSCGGGGGGGCCC
T ss_pred             heeeeeeeEEEcccHHHHhhcCCC
Confidence            999988887776543 33445443

>1yle_A Arginine N-succinyltransferase, alpha chain; structural genomics, acyltransferase, arginine metabolism, protein structure initiative; 1.70A {Pseudomonas aeruginosa} SCOP: d.108.1.8

Probab=91.95  E-value=0.21  Score=51.81  Aligned_cols=56  Identities=13%  Similarity=0.068  Sum_probs=41.7

Q ss_pred             CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcC--C-cEEEE----Ecc-ccchhhhhhcC
Q 009150          157 TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG--I-RTIFC----WGD-KESEGFWHKQD  212 (542)
Q Consensus       157 ~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~G--I-~~I~l----~a~-~~A~~Fw~KqG  212 (542)
                      +.+.||.-+.|+|+|||+|+|+.|.+.-.=.+...-  + .+|+.    +.| ++--.||.-.|
T Consensus       120 tg~sEl~tLfl~p~~R~~G~G~lLS~~R~lfiA~~~~rF~~~v~AEmrG~~De~G~SPFW~~lg  183 (342)
T 1yle_A          120 TGNSLLTSFYVQRDLVQSVYAELNSRGRLLFMASHPERFADAVVVEIVGYSDEQGESPFWNAVG  183 (342)
T ss_dssp             TTSEEEEEEEECGGGTTSHHHHHHHHHHHHHHHHCGGGSCSEEEEECCBCCCTTCCCHHHHHTG
T ss_pred             CCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHChhhhhhhhheeccCccCCCCCCccHhHhh
Confidence            469999999999999999999999998877777531  1 22322    333 34678998877

>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2

Probab=91.61  E-value=0.23  Score=42.06  Aligned_cols=38  Identities=21%  Similarity=0.508  Sum_probs=33.3

Q ss_pred             CCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          504 PGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       504 ~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      +...|.|.+|++++....++++++.+|+..||+|..++
T Consensus         4 ~~~~l~G~~~v~TG~l~~~R~e~~~~i~~~Gg~v~~sV   41 (92)
T 1l7b_A            4 GGEALKGLTFVITGELSRPREEVKALLRRLGAKVTDSV   41 (92)
T ss_dssp             CCCSSTTCEEECSTTTTSCHHHHHHHHHHTTCEEESCC
T ss_pred             CCCCcCCcEEEEecCCCCCHHHHHHHHHHcCCEEeCcc
Confidence            45679999999998876689999999999999998764

>3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens}

Probab=91.39  E-value=0.099  Score=45.88  Aligned_cols=40  Identities=5%  Similarity=-0.010  Sum_probs=32.8

Q ss_pred             cCCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          502 ARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       502 ~~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      +.+.++|.|+.|++++.....+..|+.+|+..||++...|
T Consensus        16 ~~~~p~F~g~~Ic~sGf~~~er~~l~~~i~~~GG~~~~~l   55 (112)
T 3l46_A           16 FQGVPPFQDCILSFLGFSDEEKTNMEEMTEMQGGKYLPLG   55 (112)
T ss_dssp             --CCCTTTTCEECEESCCHHHHHHHHHHHHHTTCEECCTT
T ss_pred             ccCCCccCCeEEEEeCCCHHHHHHHHHHHHHcCCEECccc
Confidence            3567899999999998665568899999999999998643

>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.31  E-value=0.18  Score=44.56  Aligned_cols=37  Identities=16%  Similarity=0.341  Sum_probs=32.8

Q ss_pred             CCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          505 GGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       505 ~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      ..+|.|+.|+|++...+.++.|+.+|+..||++...+
T Consensus        20 ~~~f~g~~i~itG~~~~~r~~l~~~i~~~Gg~v~~~~   56 (129)
T 2d8m_A           20 GKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDW   56 (129)
T ss_dssp             TTTSTTEEEEEESCCTTHHHHHHHHHHHTTEEEESSC
T ss_pred             cccCCCeEEEEeCCCcHHHHHHHHHHHHcCCEEeCCc
Confidence            4589999999999887778999999999999998754

>3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} SCOP: c.15.1.1 PDB: 3pc8_A* 3qvg_B* 1cdz_A

Probab=90.43  E-value=0.27  Score=42.57  Aligned_cols=36  Identities=11%  Similarity=0.207  Sum_probs=30.8

Q ss_pred             CCCCCCeEEEEeCCC-CCCHHHHHHHHHhCCCEEecc
Q 009150          505 GGLLRGYNIIMAAHI-QPPIKTLSAIVRSAGGNVSSK  540 (542)
Q Consensus       505 ~~LF~G~~f~Is~~v-~p~~~~L~~LIeagGG~V~~~  540 (542)
                      ..+|.|++||+++.+ ...++.|+++|.+.||++...
T Consensus         5 pd~F~g~~f~l~~~~p~~~r~~l~ryiia~GG~v~~~   41 (104)
T 3pc6_A            5 PDFFEGKHFFLYGEFPGDERRRLIRYVTAFNGELEDY   41 (104)
T ss_dssp             CCTTTTCEEEEESCCSTTHHHHHHHHHHHTTCEECSS
T ss_pred             chhhCCeEEEEcCCCcHHHHHHHHHHHHHcCCEEEcc
Confidence            469999999999887 456889999999999997653

>3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A*

Probab=89.89  E-value=0.55  Score=49.35  Aligned_cols=62  Identities=19%  Similarity=0.253  Sum_probs=51.2

Q ss_pred             CCCcEEEEEEeeecc-----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEE-EEEcc
Q 009150          140 DDDVVVAAITYQIVP-----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTI-FCWGD  201 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I-~l~a~  201 (542)
                      ..+++||-|+++...     .....+||-|+||+...|+++++.-|++|+-.++...||-.. ++-+.
T Consensus       105 ~s~kLVgfIsaiP~~irv~~~~~~~~eINFLCVhKkLRsKrLAPvLIkEITRRvn~~gI~qAvYTag~  172 (383)
T 3iu1_A          105 SSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGV  172 (383)
T ss_dssp             TTCCEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTTTCCCEEEEESS
T ss_pred             cCCeEEEEEecceEEEEEcceEeeeeEEEEEEEcHhHHhCCCcHHHHHHHHHHhhhcchhhheeecce
Confidence            477999999887664     223689999999999999999999999999999999997554 44443

>2p0w_A Histone acetyltransferase type B catalytic subuni; HAT1, structural genomics, structural genomics consortium, S transferase; HET: ACO; 1.90A {Homo sapiens}

Probab=89.31  E-value=0.73  Score=47.49  Aligned_cols=106  Identities=13%  Similarity=0.162  Sum_probs=66.1

Q ss_pred             HHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCC---cEEEEEEeeecc--CCCceeEeeeeeecc
Q 009150           95 VLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDD---VVVAAITYQIVP--ADTQYAEVPLAAVSS  169 (542)
Q Consensus        95 ~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~---~VIg~i~~~i~~--~d~~~aeI~~~AV~~  169 (542)
                      ++.+|+|--+.+..+-+.+--   |--  -|...+-.+++....+++.   .++|-++..-+|  ++..=.-|-+|.|-|
T Consensus       154 ~~~~h~Rlq~f~l~FIE~as~---id~--dd~~W~~y~l~ek~~~~~~~~y~~vGy~T~Y~f~~yp~~~R~RISQ~LILP  228 (324)
T 2p0w_A          154 FREYHERLQTFLMWFIETASF---IDV--DDERWHYFLVFEKYNKDGATLFATVGYMTVYNYYVYPDKTRPRVSQMLILT  228 (324)
T ss_dssp             HHHHHHHHHHHHHHHSTTCCC---CCT--TCTTEEEEEEEEEEEETTEEEEEEEEEEEEEEEEETTTEEEEEEEEEEECG
T ss_pred             HHHHHHHHHHHHHHhEecccc---cCC--CCCcEEEEEEEEEccCCCCCceEEEEEEEEEEeeecCCcccceeEEEEEcC
Confidence            555555444444555555543   443  2566666666654321111   489955554443  555555699999999


Q ss_pred             CccccChHHHHHHHHHHHHHHcCCcEEEEEcccc-chhh
Q 009150          170 IYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE-SEGF  207 (542)
Q Consensus       170 ~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~-A~~F  207 (542)
                      .|||+|+|+.|++.+-+.+...  ..|.=+|+.+ ++.|
T Consensus       229 PyQ~kG~G~~Ll~~iy~~~~~~--~~v~eiTVEDPse~F  265 (324)
T 2p0w_A          229 PFQGQGHGAQLLETVHRYYTEF--PTVLDITAEDPSKSY  265 (324)
T ss_dssp             GGTTSSHHHHHHHHHHHHHHTC--TTBCCBEESSCCHHH
T ss_pred             cccccCcHHHHHHHHHHHHhcC--CCeEEEEEECChHHH
Confidence            9999999999999999998873  2333344443 5554

>2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=89.30  E-value=0.13  Score=44.26  Aligned_cols=38  Identities=5%  Similarity=0.030  Sum_probs=32.3

Q ss_pred             CCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEecc
Q 009150          503 RPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK  540 (542)
Q Consensus       503 ~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~  540 (542)
                      .+.++|.|+.|++++.....+..|.++|+..||++...
T Consensus         8 ~~~~~F~g~~i~~sg~~~~~r~~l~~~i~~~GG~~~~~   45 (109)
T 2cou_A            8 FKVPPFQDCILSFLGFSDEEKHSMEEMTEMQGGSYLPV   45 (109)
T ss_dssp             SCCCTTTTCBEEEESSCHHHHHHHHHHHHHHTCBCCCT
T ss_pred             ccCCcCCCeEEEecCCCHHHHHHHHHHHHHcCCEEecc
Confidence            46789999999999865556889999999999998754

>3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV}

Probab=88.44  E-value=0.11  Score=55.87  Aligned_cols=52  Identities=21%  Similarity=0.343  Sum_probs=40.3

Q ss_pred             CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-----------cchhhhhhcCcc
Q 009150          157 TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-----------ESEGFWHKQDTS  214 (542)
Q Consensus       157 ~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-----------~A~~Fw~KqGF~  214 (542)
                      .+.+|+.-|||++++||.|+|..|.+++++.     ..+ ++|..+           -|.|+|++.||.
T Consensus       377 ~~~~~L~kfaV~~~~~g~g~~d~l~~~i~~~-----~p~-L~Wrsr~~n~~~~Wyf~rs~G~~~~~~~~  439 (467)
T 3s6k_A          377 SALIYLDKFAVLDDAQGEGLGRAVWNVMREE-----TPQ-LFWRSRHNNQVNIFYYAESDGCIKQEKWK  439 (467)
T ss_dssp             CSEEEEEEECCCHHHHTTTSHHHHHHHHTTT-----CCS-EEEEECSSCTTHHHHHHHCSEEEEETTEE
T ss_pred             CCCeEEEEEEEchhhhcCCHHHHHHHHHHHh-----CCc-eEEEeCCCCCccceEEeeeeEEEEcCCcE
Confidence            5799999999999999999999999988765     344 555443           266677766664

>1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A*

Probab=87.98  E-value=0.82  Score=48.56  Aligned_cols=78  Identities=18%  Similarity=0.225  Sum_probs=60.8

Q ss_pred             CCCcEEEEEEeeecc---CCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcE-EEEEccc-----cchhhh
Q 009150          140 DDDVVVAAITYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRT-IFCWGDK-----ESEGFW  208 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~-I~l~a~~-----~A~~Fw  208 (542)
                      ..+++||-|+++...   .+.  ..+||-|+||+...|+++++.-|++|+-.+....||-. +++-+..     ..-.||
T Consensus       108 ~s~kLVgFIsgiP~~irv~~~~~~~~eINFLCVHKKLRsKRLAPVLIkEITRRvn~~gI~QAvYTagvvLP~PvstcrY~  187 (422)
T 1iic_A          108 ETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYT  187 (422)
T ss_dssp             TTCCEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCEEEEESSCCSCCSEEEEEE
T ss_pred             cCCcEEEEEeceeEEEEEcceEEEeeEEEEEEechhhhhccCcHHHHHHHHHHhhhcchheeeeecccccCCCcccccee
Confidence            467999999988775   222  68999999999999999999999999999999999754 4444443     255666


Q ss_pred             hh---------cCccccc
Q 009150          209 HK---------QDTSADT  217 (542)
Q Consensus       209 ~K---------qGF~~~~  217 (542)
                      ++         -||+...
T Consensus       188 HR~LN~kKL~evGFs~l~  205 (422)
T 1iic_A          188 HRPLNWKKLYEVDFTGLP  205 (422)
T ss_dssp             EEESSHHHHHHTTSSCCC
T ss_pred             eeeCCHHHHhhcCCccCC
Confidence            64         5777654

>2l42_A DNA-binding protein RAP1; BRCT domain, protein binding; NMR {Saccharomyces cerevisiae}

Probab=87.98  E-value=0.32  Score=42.23  Aligned_cols=38  Identities=21%  Similarity=0.381  Sum_probs=31.2

Q ss_pred             CCCCCCCeEEEEeCCCC-----CCHHHHHHHHHhCCCEEeccC
Q 009150          504 PGGLLRGYNIIMAAHIQ-----PPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       504 ~~~LF~G~~f~Is~~v~-----p~~~~L~~LIeagGG~V~~~L  541 (542)
                      ..++|+|..|||..+..     ...+.|+++|++.||+|+..|
T Consensus         8 ~~~vF~g~~Fyin~d~~a~ds~~d~d~L~~lI~~nGG~Vl~~l   50 (106)
T 2l42_A            8 SGPPLSNMKFYLNRDADAHDSLNDIDQLARLIRANGGEVLDSK   50 (106)
T ss_dssp             SSCSSCCCCBEECCSSSCSSCSSTHHHHHHHHHTTTSCCCEEC
T ss_pred             cCccccCcEEEEcCCCccchhhhHHHHHHHHHHhcCcEEhhhC
Confidence            46789999999986532     247999999999999998765

>1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A

Probab=87.10  E-value=0.87  Score=47.96  Aligned_cols=78  Identities=17%  Similarity=0.223  Sum_probs=60.1

Q ss_pred             CCCcEEEEEEeeecc---CC----CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcE-EEEEccc-----cchh
Q 009150          140 DDDVVVAAITYQIVP---AD----TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRT-IFCWGDK-----ESEG  206 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d----~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~-I~l~a~~-----~A~~  206 (542)
                      ..+++||-|+++...   .+    ...+||-|+||+...|+++++.-|++|+-.+....||-. +++-+..     ..-.
T Consensus        86 ~s~kLVgFIsgiP~~irv~~~~~~~~~~eINFLCVhKkLRsKRLAPvLIkEITRRvn~~gI~QAvYTagvvLp~Pvstcr  165 (392)
T 1iyk_A           86 STGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCR  165 (392)
T ss_dssp             TTCCEEEEEEEEEEEEEETTTTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCEEEEECSCSSCCSEEEE
T ss_pred             CCCcEEEEEeeeeEEEEEcCcCceEEEEEEEEEEEcHhHhhcCCcHHHHHHHHHHhhhccceeeeeecCcccCCCCeeee
Confidence            467999999888765   22    258999999999999999999999999999999999744 4444443     2456


Q ss_pred             hhhh---------cCccccc
Q 009150          207 FWHK---------QDTSADT  217 (542)
Q Consensus       207 Fw~K---------qGF~~~~  217 (542)
                      ||++         -||+...
T Consensus       166 Y~HR~LN~kKL~~vgFs~l~  185 (392)
T 1iyk_A          166 YQHRPINWSKLHDVGFSHLP  185 (392)
T ss_dssp             EEEEESSHHHHHHTTSSCCC
T ss_pred             eeeeeCCHHHHhhcCCccCC
Confidence            6664         5776554

>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A

Probab=87.02  E-value=0.81  Score=40.17  Aligned_cols=37  Identities=14%  Similarity=0.289  Sum_probs=32.6

Q ss_pred             CCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          505 GGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       505 ~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      ..+|.|.+|.|++....++++++.+|+..||+|..++
T Consensus         8 ~~~l~G~~~ViTG~l~~~R~e~k~~ie~~Ggkv~~sV   44 (113)
T 2cok_A            8 DKPLSNMKILTLGKLSRNKDEVKAMIEKLGGKLTGTA   44 (113)
T ss_dssp             CCSSSSCEEEECSCCSSCHHHHHHHHHHTTCEEESCS
T ss_pred             CCCcCCCEEEEEecCCCCHHHHHHHHHHCCCEEcCcc
Confidence            3469999999999887789999999999999998764

>3pc7_A DNA ligase 3; DNA repair, BRCT domain, protein:protein interactions, XRCC1 domain, DNA binding protein; HET: DNA MSE; 1.65A {Homo sapiens} SCOP: c.15.1.2 PDB: 3pc8_C* 1imo_A* 1in1_A* 3qvg_A*

Probab=85.31  E-value=0.55  Score=39.66  Aligned_cols=35  Identities=9%  Similarity=0.205  Sum_probs=29.9

Q ss_pred             CCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEecc
Q 009150          505 GGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK  540 (542)
Q Consensus       505 ~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~  540 (542)
                      ..+|.|++|||...+. ....|++.|.|.||+|+..
T Consensus        14 pdiFsg~~~~l~~~v~-~~~~l~RyiiAfgG~v~~~   48 (88)
T 3pc7_A           14 LDIFTGVRLYLPPSTP-DFSRLRRYFVAFDGDLVQE   48 (88)
T ss_dssp             CCCSTTCEECCCTTST-THHHHHHHHHHTTCEECCG
T ss_pred             ChhhcCeEEEccCCcC-chhhheeeeeecCCEEecc
Confidence            5799999999988874 4579999999999999763

>1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2

Probab=84.81  E-value=0.9  Score=49.05  Aligned_cols=78  Identities=19%  Similarity=0.298  Sum_probs=61.6

Q ss_pred             CCCcEEEEEEeeecc-----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcE-EEEEccc-----cchhhh
Q 009150          140 DDDVVVAAITYQIVP-----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRT-IFCWGDK-----ESEGFW  208 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~-I~l~a~~-----~A~~Fw  208 (542)
                      ..+++||-|+++...     .-...+||-|+||+...|+++++.-|++|+-.+....||-. +++-+..     ..-.||
T Consensus       218 ~s~KLVgFIsgiP~~irv~~~~~~~~eINFLCVHKKLRsKRLAPVLIKEITRRvnl~gI~QAvYTaGvvLP~PvstcrY~  297 (496)
T 1rxt_A          218 SSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYW  297 (496)
T ss_dssp             SSSCEEEEECCEECCCCCSSSCCCCEECCCCEECSSCCCSSSHHHHHHHHHHHHTTTTCCCEEEEESSCCSSBSCCCCCC
T ss_pred             cCCeEEEEEeeeEEEEEEcceEEEeeeEEEEEecHhhhhccCcHHHHHHHHHHhhhcceeeeeeecCcccCCCceeeeee
Confidence            467999999988775     22378999999999999999999999999999999999744 4554443     256677


Q ss_pred             hh---------cCccccc
Q 009150          209 HK---------QDTSADT  217 (542)
Q Consensus       209 ~K---------qGF~~~~  217 (542)
                      ++         -||....
T Consensus       298 HRsLNpkKL~evGFS~l~  315 (496)
T 1rxt_A          298 HRSLNPRKLIEVKFSHLS  315 (496)
T ss_dssp             CCCSSHHHHHHTTSSCCC
T ss_pred             eeeCCHHHHhhhCCccCC
Confidence            75         4777654

>2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A*

Probab=84.27  E-value=2.1  Score=45.49  Aligned_cols=62  Identities=18%  Similarity=0.265  Sum_probs=50.4

Q ss_pred             CCCcEEEEEEeeecc--C------------------------CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCC
Q 009150          140 DDDVVVAAITYQIVP--A------------------------DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGI  193 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~--~------------------------d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI  193 (542)
                      .++++||-|+++...  -                        -...+||-|+||+...|+++++.-|++|+-.+....||
T Consensus       118 ~~~kLVgFIsgiP~~irv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eINFLCVhKkLRsKRLAPvLIkEITRRvn~~gI  197 (421)
T 2wuu_A          118 ADKKLLAFIAGVPVTLRMGTPKYMKVKAQEKGQEEEAAKYDAPRHICEINFLCVHKQLREKRLAPILIKEVTRRVNRTNV  197 (421)
T ss_dssp             TTCCEEEEEEEEEEEEECSCCHHHHHHHHHTTCHHHHHTTCSCEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTC
T ss_pred             cCCcEEEEEeeeeEEEEecccccccccccccccccchhcccceeeeeeEEEEEechhHhhccCcHHHHHHHHHHhhhcch
Confidence            467899998877653  1                        22689999999999999999999999999999999997


Q ss_pred             cE-EEEEcc
Q 009150          194 RT-IFCWGD  201 (542)
Q Consensus       194 ~~-I~l~a~  201 (542)
                      -. +++-+.
T Consensus       198 ~qAvYTag~  206 (421)
T 2wuu_A          198 WQAVYTAGV  206 (421)
T ss_dssp             CCEEEEESS
T ss_pred             hheeeeccc
Confidence            54 444433

>3oq4_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.40A {Saccharomyces cerevisiae}

Probab=83.90  E-value=2.8  Score=38.01  Aligned_cols=65  Identities=18%  Similarity=0.033  Sum_probs=50.6

Q ss_pred             hHHHHHHHHHHcCcEEeccC-CceeEEEECCCCC-------cHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCCCCc
Q 009150          411 KKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRK-------TLNFLTALCSGAWIVSPNWLKESFREGRFVDESSY  478 (542)
Q Consensus       411 kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~R-------TlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdEe~Y  478 (542)
                      +++.++..++.||++|+.-+ .++||||+..+.-       +--+..|...|..|=+.+=|+.-++.   ++.+.+
T Consensus        31 ~~~llk~~f~~LGa~I~~FFd~~VTiiITrR~~~~~~~~p~~DIL~rAr~~~mKIWs~EKl~RfL~~---Ld~d~~  103 (134)
T 3oq4_A           31 RRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAKKNYMKVWSYEKAARFLKN---LDVDLD  103 (134)
T ss_dssp             HHHHHHHHHHHTTCEEESSCCTTCCEEEESSCGGGGGGSCTTSHHHHHHHTTCEEEEHHHHHHHHHH---TTCCHH
T ss_pred             HHHHHHHHHHHcCCEEeeecCCceEEEEeCCcCcccccCCcchHHHHHHHcCCeeeeHHHHHHHHHh---cCCChh
Confidence            45678889999999999987 8999999986432       22467777889999999999888877   355543

>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A

Probab=83.48  E-value=1.8  Score=37.64  Aligned_cols=36  Identities=14%  Similarity=0.326  Sum_probs=31.4

Q ss_pred             CCCCCeEEEEeCCCC-CCHHHHHHHHHhCCCEEeccC
Q 009150          506 GLLRGYNIIMAAHIQ-PPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       506 ~LF~G~~f~Is~~v~-p~~~~L~~LIeagGG~V~~~L  541 (542)
                      ..|.|.+|+|++... .++++++.+|+..||+|..++
T Consensus        31 ~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Gg~v~~sV   67 (109)
T 2k6g_A           31 NCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNV   67 (109)
T ss_dssp             TTTTTCEEEEESBCSSCCHHHHHHHHHHTTCEEESSC
T ss_pred             CCCCCCEEEEeeeCCCCCHHHHHHHHHHcCCEeeCcc
Confidence            469999999998874 479999999999999998764

>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.82  E-value=1.9  Score=37.75  Aligned_cols=36  Identities=14%  Similarity=0.326  Sum_probs=31.4

Q ss_pred             CCCCCeEEEEeCCCC-CCHHHHHHHHHhCCCEEeccC
Q 009150          506 GLLRGYNIIMAAHIQ-PPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       506 ~LF~G~~f~Is~~v~-p~~~~L~~LIeagGG~V~~~L  541 (542)
                      ..|.|.+|+|++... .++++++.+|+..||+|..++
T Consensus        21 ~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Ggkv~~sV   57 (112)
T 2ebu_A           21 NCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNV   57 (112)
T ss_dssp             SSSTTCEEEECSCCSSSCHHHHHHHHHHTTCEECSSC
T ss_pred             CCcCCCEEEEeeeCCCCCHHHHHHHHHHcCCEEeccc
Confidence            469999999998874 479999999999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	542
d1z4ra1	162	d.108.1.1 (A:497-658) Catalytic domain of GCN5 his	3e-14
d1kzyc1	153	c.15.1.4 (C:1714-1866) 53BP1 {Human (Homo sapiens)	2e-13
d1qsra_	162	d.108.1.1 (A:) Catalytic domain of GCN5 histone ac	6e-13
d1t15a1	109	c.15.1.3 (A:1649-1757) Breast cancer associated pr	3e-11
d1ygha_	164	d.108.1.1 (A:) Catalytic domain of GCN5 histone ac	6e-10
d1cdza_	96	c.15.1.1 (A:) DNA-repair protein XRCC1 {Human (Hom	2e-07
d1wf6a_	132	c.15.1.5 (A:) DNA topoisomerase II binding protein	2e-06
d1t15a2	102	c.15.1.3 (A:1758-1859) Breast cancer associated pr	3e-05
d2aj6a1	118	d.108.1.1 (A:1-118) Hypothetical protein MW0638 {S	0.002

>d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 3e-14
 Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 16/139 (11%)

Query: 75  FVLVNPKDAEDSC--SKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLL 132
           F ++       +      +L  +  ++S +LP M           ++ + V + K+ TL 
Sbjct: 5   FHVIGNSLTPKANRRVLLWLVGLQNVFSHQLPRM--------PKEYIARLVFDPKHKTLA 56

Query: 133 LKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG 192
           L       D  V+  I +++ P    + E+   AV+S  Q KG G  L   L++      
Sbjct: 57  LI-----KDGRVIGGICFRMFP-TQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHN 110

Query: 193 IRTIFCWGDKESEGFWHKQ 211
           I     + D+ + G++ KQ
Sbjct: 111 ILYFLTYADEYAIGYFKKQ 129

>d1kzyc1 c.15.1.4 (C:1714-1866) 53BP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 153

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: 53BP1
domain: 53BP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 2e-13
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 7/77 (9%)

Query: 411 KKVHLTKVIEDLGGAVTSDGSTS-------THVVTGKVRKTLNFLTALCSGAWIVSPNWL 463
            K +    +    G +  D + +         ++  +  +T  +   L SG   VS  W+
Sbjct: 59  NKQYTESQLRAGAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWV 118

Query: 464 KESFREGRFVDESSYML 480
            +S    +  +  +Y+L
Sbjct: 119 HDSCHANQLQNYRNYLL 135

>d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Tetrahymena thermophila [TaxId: 5911]

 Score = 64.7 bits (157), Expect = 6e-13
 Identities = 28/137 (20%), Positives = 60/137 (43%), Gaps = 15/137 (10%)

Query: 75  FVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLK 134
           F ++       +     L D+  I+SR+LP M           ++ K V +  + ++++ 
Sbjct: 3   FDILTNDGTHRN--MKLLIDLKNIFSRQLPKMP--------KEYIVKLVFDRHHESMVI- 51

Query: 135 SSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIR 194
              + +   V+  I ++      ++AEV   AV++  Q +G G  L  + +  +Q   I 
Sbjct: 52  ---LKNKQKVIGGICFRQYK-PQRFAEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIE 107

Query: 195 TIFCWGDKESEGFWHKQ 211
            +  + D  + G++ KQ
Sbjct: 108 YLLTYADNFAIGYFKKQ 124

>d1t15a1 c.15.1.3 (A:1649-1757) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: BRCT domain
domain: Breast cancer associated protein, BRCA1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 3e-11
 Identities = 17/91 (18%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 401 IMLMNIADDSKKVHLTKVIEDLGGAVTSD-GSTSTHVVT-----GKVRKTLNFLTALCSG 454
           +++  +  +   + + K        +T+     +THVV          +TL +   +  G
Sbjct: 4   MVVSGLTPEEFML-VYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGG 62

Query: 455 AWIVSPNWLKESFREGRFVDESSYMLNDDDY 485
            W+VS  W+ +S +E + ++E  + +  D  
Sbjct: 63  KWVVSYFWVTQSIKERKMLNEHDFEVRGDVV 93

>d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 164

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.9 bits (134), Expect = 6e-10
 Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 16/141 (11%)

Query: 72  EYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTL 131
           +  F +VN  + +++     L  +  I+ ++LP M           ++ + V +  + ++
Sbjct: 1   KIEFRVVNNDNTKEN--MMVLTGLKNIFQKQLPKMP--------KEYIARLVYDRSHLSM 50

Query: 132 LLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRL-QS 190
            +    +     VV  ITY+      ++AE+   A+SS  Q +G G  L   L+  +  +
Sbjct: 51  AV----IRKPLTVVGGITYRPFD-KREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNT 105

Query: 191 VGIRTIFCWGDKESEGFWHKQ 211
             I+    + D  + G++ KQ
Sbjct: 106 SNIKYFLTYADNYAIGYFKKQ 126

>d1cdza_ c.15.1.1 (A:) DNA-repair protein XRCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA-repair protein XRCC1
domain: DNA-repair protein XRCC1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 2e-07
 Identities = 9/85 (10%), Positives = 20/85 (23%), Gaps = 2/85 (2%)

Query: 399 FRIMLMNIADDSKKVHLTKVIEDLGGA-VTSDGSTSTHVVTGKVRKT-LNFLTALCSGAW 456
               L       ++  L + +    G            V+T +                 
Sbjct: 9   KHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPSLA 68

Query: 457 IVSPNWLKESFREGRFVDESSYMLN 481
            V P W+     + + +    Y + 
Sbjct: 69  FVRPRWIYSCNEKQKLLPHQLYGVV 93

>d1wf6a_ c.15.1.5 (A:) DNA topoisomerase II binding protein 1, TopBP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 132

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA topoisomerase II binding protein 1, TopBP1
domain: DNA topoisomerase II binding protein 1, TopBP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 2e-06
 Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 6/97 (6%)

Query: 391 EFQSNGKCF---RIMLMNIADDSKKVHLTKVIEDLGGAVTSD-GSTSTHVVTGKVR-KTL 445
            FQ+        RI L   +       L ++I   GG   +      THV+ G    +  
Sbjct: 33  AFQAPEDLLDGCRIYLCGFSGRKLD-KLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELK 91

Query: 446 NFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLND 482
            F         +V   WL E F +G  + E  Y+ + 
Sbjct: 92  QFWNKSAHRPHVVGAKWLLECFSKGYMLSEEPYIHSG 128

>d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: BRCT domain
domain: Breast cancer associated protein, BRCA1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 3e-05
 Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 10/92 (10%)

Query: 399 FRIMLMNIADDSKKVHLTKVIEDLGGAVTSD--------GSTSTHVVTGKVRKTLNFLTA 450
             I       +     L  +++  G +V  +        G     VV        N   A
Sbjct: 7   LEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTEDNGFHA 66

Query: 451 LC--SGAWIVSPNWLKESFREGRFVDESSYML 480
           +     A +V+  W+ +S    +  +  +Y++
Sbjct: 67  IGQMCEAPVVTREWVLDSVALYQCQELDTYLI 98

>d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} Length = 118

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein MW0638
species: Staphylococcus aureus [TaxId: 1280]

 Score = 36.4 bits (83), Expect = 0.002
 Identities = 17/119 (14%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 78  VNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSF 137
           +N  +        Y++ +  I+   L  +       K S+ L   ++  +      K   
Sbjct: 4   LNKDEHN------YIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYI 57

Query: 138 MDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTI 196
            +++  ++A I       +     + L  V   ++  G+   L + L K  +++  + I
Sbjct: 58  YENEGQLIAFIWGHFSN-EKSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRI 115

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	542
d1z4ra1	162	Catalytic domain of GCN5 histone acetyltransferase	99.93
d1qsra_	162	Catalytic domain of GCN5 histone acetyltransferase	99.89
d1ygha_	164	Catalytic domain of GCN5 histone acetyltransferase	99.88
d1t15a1	109	Breast cancer associated protein, BRCA1 {Human (Ho	99.73
d1wf6a_	132	DNA topoisomerase II binding protein 1, TopBP1 {Hu	99.49
d1mk4a_	157	Hypothetical protein YqiY {Bacillus subtilis [TaxI	99.4
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	99.39
d1cdza_	96	DNA-repair protein XRCC1 {Human (Homo sapiens) [Ta	99.36
d2jdca1	145	Probable acetyltransferase YitI {Bacillus lichenif	99.35
d1n71a_	180	Aminoglycoside 6'-N-acetyltransferase {Enterococcu	99.35
d1kzyc1	153	53BP1 {Human (Homo sapiens) [TaxId: 9606]}	99.35
d1y9wa1	140	Probable acetyltransferase BC2806 {Bacillus cereus	99.35
d1bo4a_	137	Aminoglycoside 3-N-acetyltransferase {Serratia mar	99.34
d1y9ka1	152	IAA acetyltransferase {Bacillus cereus [TaxId: 139	99.32
d1y7ra1	133	Hypothetical protein SA2161 {Staphylococcus aureus	99.31
d1yvka1	152	Hypothetical protein YvbK (BSu33890) {Bacillus sub	99.31
d1ghea_	170	Tabtoxin resistance protein {Pseudomonas syringae	99.3
d2atra1	137	Probable acetyltransferase SP0256 {Streptococcus p	99.3
d1i12a_	157	Glucosamine-phosphate N-acetyltransferase GNA1 {Ba	99.3
d1q2ya_	140	Probable acetyltransferase YjcF {Bacillus subtilis	99.27
d1vkca_	149	Putative acetyltransferase PF0028 {Pyrococcus furi	99.26
d1s3za_	147	Aminoglycoside N-acetyltransferase AAC(6')-IY {Sal	99.24
d1yx0a1	151	Hypothetical protein YsnE {Bacillus subtilis [TaxI	99.2
d1ufha_	155	Putative acetyltransferase YycN {Bacillus subtilis	99.19
d2gana1	182	Hypothetical protein PH0736 {Pyrococcus horikoshii	99.18
d1wwza1	157	Hypothetical protein PH1933 {Pyrococcus horikoshii	99.17
d1tiqa_	173	Protease synthase and sporulation negative regulat	99.16
d2fiaa1	157	Probable acetyltransferase EF1919 {Enterococcus fa	99.15
d1cjwa_	166	Serotonin N-acetyltranferase {Sheep (Ovis aries) [	99.14
d2fiwa1	156	Probable N-acetyltransferase RPA1999 {Rhodopseudom	99.14
d2fe7a1	156	Probable N-acetyltransferase PA0478 {Pseudomonas a	99.14
d2euia1	153	Probable acetyltransferase PA4026 {Pseudomonas aer	99.12
d1vhsa_	165	Putative phosphinothricin acetyltransferase YwnH {	99.12
d1z4ea1	150	Transcriptional regulator BH1968 {Bacillus halodur	99.12
d1xeba_	149	Hypothetical protein PA0115 {Pseudomonas aeruginos	99.12
d1u6ma_	189	Putative acetyltransferase EF0945 {Enterococcus fa	99.11
d2cy2a1	174	Probable acetyltransferase TTHA1209 {Thermus therm	99.1
d1yr0a1	163	Phosphinothricin acetyltransferase {Agrobacterium	99.1
d1t15a2	102	Breast cancer associated protein, BRCA1 {Human (Ho	99.08
d1qsma_	150	Histone acetyltransferase HPA2 {Baker's yeast (Sac	99.07
d2fl4a1	146	Probable spermine/spermidine acetyltransferase EF1	99.07
d2i6ca1	160	Putative acetyltransferase PA4794 {Pseudomonas aer	99.05
d1yvoa1	169	Hypothetical protein PA4866 {Pseudomonas aeruginos	99.04
d2b5ga1	167	Diamine acetyltransferase 1 {Human (Homo sapiens)	99.03
d2ae6a1	161	Putative acetyltransferase EF0244 {Enterococcus fa	98.99
d2beia1	167	Diamine acetyltransferase 2 {Human (Homo sapiens)	98.95
d1r57a_	102	Hypothetical protein SA2309 {Staphylococcus aureus	98.89
d1p0ha_	308	Mycothiol synthase MshD {Mycobacterium tuberculosi	98.84
d2ge3a1	164	Probable acetyltransferase Atu2290 {Agrobacterium	98.81
d1m4ia_	181	Aminoglycoside 2'-N-acetyltransferase {Mycobacteri	98.68
d1yrea1	183	Hypothetical protein PA3270 {Pseudomonas aeruginos	98.68
d2aj6a1	118	Hypothetical protein MW0638 {Staphylococcus aureus	98.67
d1nsla_	180	Probable acetyltransferase YdaF {Bacillus subtilis	98.66
d1s7ka1	174	L7/L12-Ribosomal-protein-serine acetyltransferase	98.64
d2hv2a2	285	Hypothetical protein EF1021 {Enterococcus faecalis	98.63
d1sqha_	297	Hypothetical protein cg14615-pa {Fruit fly (Drosop	98.59
d2fcka1	178	Putative ribosomal-protein-serine acetyltransferas	98.57
d2i00a2	291	Putative acetyltransferase EF2353 {Enterococcus fa	98.55
d2ozga2	283	Putative acetyltransferase Ava4977 {Anabaena varia	98.53
d1in1a_	88	DNA ligase III alpha {Human (Homo sapiens) [TaxId:	98.46
d1l7ba_	92	NAD+-dependent DNA ligase, domain 4 {Thermus therm	98.3
d1yk3a1	198	Hypothetical protein Rv1347c/MT1389 {Mycobacterium	98.0
d2fsra1	164	Probable acetyltranferase Atu2435 {Agrobacterium t	97.48
d1ro5a_	197	Autoinducer synthesis protein LasI {Pseudomonas ae	97.27
d1p0ha_	308	Mycothiol synthase MshD {Mycobacterium tuberculosi	97.19
d1xmta_	95	Hypothetical protein AT1g77540 {Thale cress (Arabi	97.1
d1kzyc2	106	53BP1 {Human (Homo sapiens) [TaxId: 9606]}	96.82
d1t15a2	102	Breast cancer associated protein, BRCA1 {Human (Ho	96.73
d1iica1	185	N-myristoyl transferase, NMT {Baker's yeast (Sacch	95.99
d1rxta1	141	N-myristoyl transferase, NMT {Human (Homo sapiens)	95.61
d1kzfa_	210	Acyl-homoserinelactone synthase EsaI {Pantoea stew	95.39
d1iyka1	165	N-myristoyl transferase, NMT {Yeast (Candida albic	95.01
d1l0ba2	97	Breast cancer associated protein, BRCA1 {Rat (Ratt	93.82
d1wf6a_	132	DNA topoisomerase II binding protein 1, TopBP1 {Hu	93.45
d1cdza_	96	DNA-repair protein XRCC1 {Human (Homo sapiens) [Ta	93.28
d1in1a_	88	DNA ligase III alpha {Human (Homo sapiens) [TaxId:	92.03
d1l0ba2	97	Breast cancer associated protein, BRCA1 {Rat (Ratt	91.23
d1l7ba_	92	NAD+-dependent DNA ligase, domain 4 {Thermus therm	90.88
d1boba_	315	Histone acetyltransferase HAT1 {Baker's yeast (Sac	86.02
d1lrza3	182	Methicillin resistance protein FemA {Staphylococcu	83.62

>d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1e-25  Score=208.35  Aligned_cols=149  Identities=23%  Similarity=0.346  Sum_probs=128.6

Q ss_pred             eEEeeCCCCcc--ccchhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEee
Q 009150           74 IFVLVNPKDAE--DSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQ  151 (542)
Q Consensus        74 ~~~~~~~~~~~--~~~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~  151 (542)
                      .|.++++....  +.+...+|..++++|.++||+|+        ++||+|+++|..+.+++++.     +|+|||+++++
T Consensus         4 ~~~~~~n~~~~~~~~~~~~~L~~~~~iF~~~lp~m~--------~~yi~r~~~d~~~~~~v~~~-----~~~iIG~i~~~   70 (162)
T d1z4ra1           4 EFHVIGNSLTPKANRRVLLWLVGLQNVFSHQLPRMP--------KEYIARLVFDPKHKTLALIK-----DGRVIGGICFR   70 (162)
T ss_dssp             EEEEECCSSCTTSCHHHHHHHHHHHHHHHHHCTTSC--------HHHHHHHHTCTTCEEEEEEE-----TTEEEEEEEEE
T ss_pred             EEEEecCCCCCccCHHHHHHHHHHHHHHHHhCCCCc--------HHHHHHHhcCCCceEEEEEE-----CCEEEEEEEEE
Confidence            46677775441  45778899999999999999999        99999999999999998874     67999999999


Q ss_pred             eccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccccccccCCCC--C
Q 009150          152 IVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVSLKFCFPVK--P  229 (542)
Q Consensus       152 i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~~~~~~~~~~--~  229 (542)
                      +++ +.+++||.++||+++|||+|+|+.||+++++++++.|++++++.+++.|.+||+|+||++...+... .|-+.  |
T Consensus        71 ~~~-~~~~aeI~~laV~~~~qgkGiG~~Lm~~l~~~~~~~g~~~i~~~~~~~A~~fY~k~GF~~~~~~~~~-~~~~~ikd  148 (162)
T d1z4ra1          71 MFP-TQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKS-RYLGYIKD  148 (162)
T ss_dssp             EET-TTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHTTEESCCCSCHH-HHTTTSCC
T ss_pred             EEC-CCCEEEEEEEEEChhhhhhhHHHHHHHHHHHHHHHCCCcEEEEecCcchHHHHHhCCCeEeccCchh-HhcCCccC
Confidence            988 6689999999999999999999999999999999999999999999999999999999876554221 12222  5


Q ss_pred             CCceeEEE
Q 009150          230 CEKSSLVT  237 (542)
Q Consensus       230 c~ea~lm~  237 (542)
                      |+.+++|.
T Consensus       149 y~~~~lm~  156 (162)
T d1z4ra1         149 YEGATLME  156 (162)
T ss_dssp             CTTCEEEE
T ss_pred             CCCeEEEE
Confidence            77799998

>d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Tetrahymena thermophila [TaxId: 5911]

Probab=99.89  E-value=2.9e-23  Score=191.71  Aligned_cols=147  Identities=20%  Similarity=0.356  Sum_probs=127.6

Q ss_pred             eEEeeCCCCccccchhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeec
Q 009150           74 IFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIV  153 (542)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~  153 (542)
                      .|.+++.++.  +...++|.++++||.++||.|+        ++|+.|+++|..+.++++..    .+|+|||++++++.
T Consensus         2 ~~r~i~~~d~--~e~~~lL~~l~~if~~~lp~~~--------~~y~~r~i~d~~~~~~~v~~----~~g~iVG~~~~~~~   67 (162)
T d1qsra_           2 DFDILTNDGT--HRNMKLLIDLKNIFSRQLPKMP--------KEYIVKLVFDRHHESMVILK----NKQKVIGGICFRQY   67 (162)
T ss_dssp             EEEEECCCSC--HHHHHHHHHHHHHHHHHCTTSC--------HHHHHHHHTSTTEEEEEEEE----TTTEEEEEEEEEEE
T ss_pred             EEEEecCCCC--HHHHHHHHHHHHHHHHHCCCCC--------HHHHHHHhhCcCCcEEEEEE----ECCEEEEEEEEEEE
Confidence            4667786664  5678899999999999999999        99999999999999887775    57899999999988


Q ss_pred             cCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccccccccc---ccCCCCCC
Q 009150          154 PADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVSLK---FCFPVKPC  230 (542)
Q Consensus       154 ~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~~~~---~~~~~~~c  230 (542)
                      + +..++||..+||+|+|||+|||++||+++++++++.|+.++++.+++.|.+||+|+||+....+.+.   ..+.  +|
T Consensus        68 ~-~~~~~ei~~laV~p~~rg~GiG~~Ll~~l~~~a~~~g~~~i~l~~~~~a~~fY~k~GF~~~~~~~~~~~~~~~k--~y  144 (162)
T d1qsra_          68 K-PQRFAEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFTKEHRMPQEKWKGYIK--DY  144 (162)
T ss_dssp             T-TTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHTTCBSSCSSCHHHHBTTBC--CC
T ss_pred             C-CCCEEEEEEEEEcHHHccCchHHHHHHHHHHHHHhCCCeEEEEecCCccHHHHHhCCCeeeccCChhHhcCccc--CC
Confidence            7 5579999999999999999999999999999999999999999999999999999999887766211   1122  24


Q ss_pred             CceeEEE
Q 009150          231 EKSSLVT  237 (542)
Q Consensus       231 ~ea~lm~  237 (542)
                      +.+.+|.
T Consensus       145 ~~~~~M~  151 (162)
T d1qsra_         145 DGGTLME  151 (162)
T ss_dssp             TTSEEEE
T ss_pred             CCeEEEE
Confidence            5599998

>d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=9e-23  Score=188.41  Aligned_cols=152  Identities=20%  Similarity=0.343  Sum_probs=126.9

Q ss_pred             eEEeeCCCCccccchhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeec
Q 009150           74 IFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIV  153 (542)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~  153 (542)
                      .|.+||..+.  ++...+|.++.+||++|||.|+        ++||.|+++|..+.++++..    ++++|||+++++++
T Consensus         3 ~~r~i~~~~~--~e~~~~L~~~~~if~~~lp~~~--------~~~i~r~~~d~~~~~~~v~~----~~~~iVG~~~~~~~   68 (164)
T d1ygha_           3 EFRVVNNDNT--KENMMVLTGLKNIFQKQLPKMP--------KEYIARLVYDRSHLSMAVIR----KPLTVVGGITYRPF   68 (164)
T ss_dssp             EEEEECCSSC--HHHHHHHHHHHHHHHHHCTTSC--------HHHHHHHHHCTTCEEEEEEE----TTTEEEEEEEEEEE
T ss_pred             EEEEEcCCCC--HHHHHHHHHHHHHHHHHcCCcc--------HHHHHHHHhccCCceEEEEE----eCCeEEEEEEEEec
Confidence            4777884443  6778899999999999999999        99999999999999988875    58899999999988


Q ss_pred             cCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEccccchhhhhhcCccccccccccccCCCC--CC
Q 009150          154 PADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG-IRTIFCWGDKESEGFWHKQDTSADTAVSLKFCFPVK--PC  230 (542)
Q Consensus       154 ~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~G-I~~I~l~a~~~A~~Fw~KqGF~~~~~~~~~~~~~~~--~c  230 (542)
                      + +..++||..+||+|+|||+|||++||+++++++++.| +..+++.+++.|.+||+|+||+....+.+.- |.++  ||
T Consensus        69 ~-~~~~aeI~~laV~p~~rg~GiG~~L~~~l~~~~k~~~~~~~~~~~~n~~A~~fY~k~GF~~~~~~~~~~-~~gy~kd~  146 (164)
T d1ygha_          69 D-KREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYADNYAIGYFKKQGFTKEITLDKSI-WMGYIKDY  146 (164)
T ss_dssp             G-GGTEEEEEEEEECTTCCCTTHHHHHHHHHHHHHHHHSCCCEEEEEECGGGHHHHHHTTCBSSCCSCHHH-HBTTBCCT
T ss_pred             C-CCCEEEEEEEEECchhccCHHHHHHHHHHHHHHHhhCceEEEEEecCHHHHHHHHhcCCEEecccchhh-hcCcccCC
Confidence            7 5679999999999999999999999999999999876 5666666777899999999998877663221 1121  47


Q ss_pred             CceeEEE--Eecc
Q 009150          231 EKSSLVT--VNRS  241 (542)
Q Consensus       231 ~ea~lm~--l~~~  241 (542)
                      +.+.+|.  |...
T Consensus       147 e~~ilM~~~l~p~  159 (164)
T d1ygha_         147 EGGTLMQCSMLPR  159 (164)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             CCeEEEEEEcCCC
Confidence            7799999  6443

>d1t15a1 c.15.1.3 (A:1649-1757) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: BRCT domain
domain: Breast cancer associated protein, BRCA1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=3.9e-18  Score=146.85  Aligned_cols=85  Identities=20%  Similarity=0.414  Sum_probs=78.1

Q ss_pred             eEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECC-----CCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCC
Q 009150          399 FRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGK-----VRKTLNFLTALCSGAWIVSPNWLKESFREGRF  472 (542)
Q Consensus       399 ~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k-----~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~  472 (542)
                      +.|++||+.+++ ++.+.++++.|||++.+.+ +.|||||+..     ..||+|||.|++.|+|||+++||.+|+++|++
T Consensus         2 ~~i~~SGl~~~e-~~~l~~~i~~~Gg~~~~~~~~~~THlI~~~~~~~~~~rt~K~l~a~~~g~~IV~~~Wl~~c~~~~~~   80 (109)
T d1t15a1           2 MSMVVSGLTPEE-FMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKM   80 (109)
T ss_dssp             CEEEEESCCHHH-HHHHHHHHHHHTCEECSSCCTTCCEEEECBCTTSEECCBHHHHHHHHTTCEEEETHHHHHHHHTTSC
T ss_pred             EEEEECCCCHHH-HHHHHHHHHHcCCEEEeEecCCccEEEEecCcchhhHhhHHHHHHHHCCCccccHHHHHHHHHhCCc
Confidence            678999998776 6789999999999999997 8999999974     57899999999999999999999999999999


Q ss_pred             CCCCCcccCCch
Q 009150          473 VDESSYMLNDDD  484 (542)
Q Consensus       473 LdEe~YeL~d~~  484 (542)
                      +||++|++....
T Consensus        81 l~e~~y~v~~~~   92 (109)
T d1t15a1          81 LNEHDFEVRGDV   92 (109)
T ss_dssp             CCGGGGBCCEET
T ss_pred             CCchheEEeccc
Confidence            999999988654

>d1wf6a_ c.15.1.5 (A:) DNA topoisomerase II binding protein 1, TopBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA topoisomerase II binding protein 1, TopBP1
domain: DNA topoisomerase II binding protein 1, TopBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.2e-13  Score=121.97  Aligned_cols=88  Identities=23%  Similarity=0.373  Sum_probs=77.6

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCC-CcHHHHHHHhcCCeEeCHHHHHHHHHcCCCC
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVR-KTLNFLTALCSGAWIVSPNWLKESFREGRFV  473 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~-RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~L  473 (542)
                      -++++|+|||+...+ ++.+.++|..+||++.... +.|||||+.... ++.+++.+...++|||+|+||.+|+++++++
T Consensus        41 f~G~~i~isGf~~~~-~~~l~~~i~~~GG~~~~~~~~~vTHvIv~~~~~~~~~~~~~~~~~i~iV~~~Wl~~c~~~~~~l  119 (132)
T d1wf6a_          41 LDGCRIYLCGFSGRK-LDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPHVVGAKWLLECFSKGYML  119 (132)
T ss_dssp             TTTCEEEEESCCSHH-HHHHHHHHHHTTCEEESSCCSSCCEEEESSCCSHHHHHHHHSCCCCCEEEHHHHHHHHHHSSCC
T ss_pred             hCCeEEEEeeCCCHH-HHHHHHHHHHcCCEEecccCCCceEEEecCCCccHHHHHHHhcCCCCcCCHHHHHHHHHcCCcC
Confidence            568999999998765 7789999999999999888 789999998753 5567788888999999999999999999999


Q ss_pred             CCCCcccCCch
Q 009150          474 DESSYMLNDDD  484 (542)
Q Consensus       474 dEe~YeL~d~~  484 (542)
                      ||++|.+..+.
T Consensus       120 ~~~~Y~~~~P~  130 (132)
T d1wf6a_         120 SEEPYIHSGPS  130 (132)
T ss_dssp             CSGGGBCCCSC
T ss_pred             CHHhCcCCCCC
Confidence            99999987653

>d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein YqiY
species: Bacillus subtilis [TaxId: 1423]

Probab=99.40  E-value=3.3e-13  Score=119.90  Aligned_cols=122  Identities=12%  Similarity=0.103  Sum_probs=89.1

Q ss_pred             hhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeecc
Q 009150           90 SYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSS  169 (542)
Q Consensus        90 ~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~  169 (542)
                      +...|+..|+.    .++.+-....+.+.+.|..++....+..+.   + ++|++||.+.+...+.+.+.++|..++|+|
T Consensus         7 ~~~~D~~~i~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~-~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p   78 (157)
T d1mk4a_           7 ITSSDYEMVTS----VLNEWWGGRQLKEKLPRLFFEHFQDTSFIT---S-EHNSMTGFLIGFQSQSDPETAYIHFSGVHP   78 (157)
T ss_dssp             CCGGGHHHHHH----HTTTSSTTCCCSCCCCTHHHHHCGGGCEEE---E-SSSSEEEEEEEEECSSSTTEEEEEEEEECT
T ss_pred             CCHHHHHHHHH----HHHHHhcCCchhhHHHHhhhhccCceEEEE---E-ECCEEEEEeeeeeeccCCccceeeEEEEEH
Confidence            33445555555    333322233344445555444333332222   2 578999988777777677899999999999


Q ss_pred             CccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcCccccccc
Q 009150          170 IYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQDTSADTAV  219 (542)
Q Consensus       170 ~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqGF~~~~~~  219 (542)
                      +|||+|+|++|++++++.+++.|+.+|.+.+.+.   |..||+|+||+.....
T Consensus        79 ~~rg~Gig~~Ll~~~~~~~~~~g~~~v~~~~~~~N~~a~~~y~k~GF~~~~~~  131 (157)
T d1mk4a_          79 DFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKGT  131 (157)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECCCS
T ss_pred             HHcCCcccchHHHHHHHhhccccceEEEEEeccchHHHHHHHHHCCCEEeeeE
Confidence            9999999999999999999999999999988774   8999999999987654

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.39  E-value=5.7e-13  Score=117.74  Aligned_cols=84  Identities=11%  Similarity=0.082  Sum_probs=74.9

Q ss_pred             CCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCccccc
Q 009150          139 DDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADT  217 (542)
Q Consensus       139 ~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~  217 (542)
                      +++|+|||++.....+   ..++|..++|+|++||+|||+.|++++++.+++.|+.++.+.+.+ .|..||+|+||+.++
T Consensus        43 d~~g~ivG~~~~~~~~---~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~~n~~a~~fY~k~GF~~~g  119 (137)
T d2g3aa1          43 NDDNSVTGGLVGHTAR---GWLYVQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFTKIG  119 (137)
T ss_dssp             CTTCCEEEEEEEEEET---TEEEEEEEECCGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTCEEEE
T ss_pred             eCCCCEEEEEEEEEeC---CeEEEEEEEEChhhcCCChHHHHHHHHHHHHHHcCCceEEEecccHhhHHHHHhCCCEEEE
Confidence            4688999999887765   368999999999999999999999999999999999999998876 599999999999988


Q ss_pred             cccccccCCCC
Q 009150          218 AVSLKFCFPVK  228 (542)
Q Consensus       218 ~~~~~~~~~~~  228 (542)
                      ..   +.||++
T Consensus       120 ~~---~~~~~~  127 (137)
T d2g3aa1         120 SL---GPLSSG  127 (137)
T ss_dssp             EE---CCCTTS
T ss_pred             EE---CCCCCC
Confidence            76   447666

>d1cdza_ c.15.1.1 (A:) DNA-repair protein XRCC1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA-repair protein XRCC1
domain: DNA-repair protein XRCC1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=8.6e-13  Score=108.97  Aligned_cols=84  Identities=14%  Similarity=0.218  Sum_probs=70.6

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhc--CCeEeCHHHHHHHHHcCCC
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCS--GAWIVSPNWLKESFREGRF  472 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~--G~wIVSpsWL~dSlk~Gk~  472 (542)
                      -++.+|+++|-.+...+..+.+.|..+||++.+.. +++||||+.... +.++..+++.  +++||+|+||.+|+++++.
T Consensus         6 F~g~~f~v~g~~~~~~~~~l~~~i~~~GG~v~~~~~~~~THvI~~~~~-~~~~~~~~~~~~~i~iV~~~Wl~dc~~~~~~   84 (96)
T d1cdza_           6 FQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEW-DPSFEEALMDNPSLAFVRPRWIYSCNEKQKL   84 (96)
T ss_dssp             TTTCEEEECSCCCTHHHHHHHHHHHHTTCEECSSCSTTCSEEECSSCC-CHHHHHHHTTCTTCEEECTHHHHHHHTTTSC
T ss_pred             cCCcEEEEeCCCCHHHHHHHHHHHHHhCCEEeccCCCCceEEEEccCC-cceeeehhhhCCCCeEEEEhHHHHHHHcCCc
Confidence            35789999985555557889999999999999887 889999998753 4555555554  7899999999999999999


Q ss_pred             CCCCCccc
Q 009150          473 VDESSYML  480 (542)
Q Consensus       473 LdEe~YeL  480 (542)
                      +|+++|.+
T Consensus        85 lp~~~Y~i   92 (96)
T d1cdza_          85 LPHQLYGV   92 (96)
T ss_dssp             CCGGGGBC
T ss_pred             CCchhcEe
Confidence            99999987

>d2jdca1 d.108.1.1 (A:2-146) Probable acetyltransferase YitI {Bacillus licheniformis [TaxId: 1402]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase YitI
species: Bacillus licheniformis [TaxId: 1402]

Probab=99.35  E-value=1e-12  Score=117.49  Aligned_cols=80  Identities=14%  Similarity=0.235  Sum_probs=72.7

Q ss_pred             CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~  215 (542)
                      ++++|||++.+...+    ++...++|..++|+++|||+|||+.||+++.+.+++.|+..|++.+...|..||+|+||+.
T Consensus        45 ~~~~iVg~~~~~~~~~~~~~~~~~~~l~~l~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~a~~~A~~fY~k~GF~~  124 (145)
T d2jdca1          45 YGGKLISIASFHQAEHSELQGQKQYQLRGMATLEGYREQKAGSSLIKHAEEILRKRGADLLWCNARTSASGYYKKLGFSE  124 (145)
T ss_dssp             ETTEEEEEEEEEECCCTTSCCSSEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHTTCEE
T ss_pred             eCCEEEEEEEEEeccccccCCCCeEEEEEEEEeHHHhhhhHHHHHHHHHHHHHHHcCCCEEEEeccchHHHHHHHCCCEE
Confidence            477999999887765    4456788999999999999999999999999999999999999999888999999999999


Q ss_pred             cccc
Q 009150          216 DTAV  219 (542)
Q Consensus       216 ~~~~  219 (542)
                      .++.
T Consensus       125 ~g~~  128 (145)
T d2jdca1         125 QGEV  128 (145)
T ss_dssp             EEEE
T ss_pred             eCcE
Confidence            9876

>d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Aminoglycoside 6'-N-acetyltransferase
species: Enterococcus faecium [TaxId: 1352]

Probab=99.35  E-value=3e-12  Score=117.27  Aligned_cols=136  Identities=15%  Similarity=0.072  Sum_probs=94.1

Q ss_pred             chhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeee
Q 009150           87 CSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAA  166 (542)
Q Consensus        87 ~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~A  166 (542)
                      ..+.+.+++.+|+...+|..- +-..   .+.+.+. ++.....++..     +++++||++.+...+ +...++|..++
T Consensus         9 ~~p~~~~~l~~l~~~~~p~~~-~~~~---~~~~~~~-~~~~~~~~va~-----~~~~iig~~~~~~~~-~~~~~~I~~i~   77 (180)
T d1n71a_           9 NNPVLKDQLSDLLRLTWPEEY-GDSS---AEEVEEM-MNPERIAVAAV-----DQDELVGFIGAIPQY-GITGWELHPLV   77 (180)
T ss_dssp             TCHHHHHHHHHHHHHHCTTTS-SSTH---HHHHHHH-TCTTSEEEEEE-----ETTEEEEEEEEEEEE-TTTEEEEEEEE
T ss_pred             cChHHHHHHHHHHHHhCCccc-Ccch---HHHHHHH-hCCCCEEEEEE-----ECCeEEEEEEEEEec-CCCEEEEEEEE
Confidence            345566667777777777532 1111   1113333 22222223222     477899998777665 44688999999


Q ss_pred             eccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc----------------------------ccchhhhhhcCcccccc
Q 009150          167 VSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD----------------------------KESEGFWHKQDTSADTA  218 (542)
Q Consensus       167 V~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~----------------------------~~A~~Fw~KqGF~~~~~  218 (542)
                      |+|+|||||||++|++++++.+++.|+..|.|.++                            ..|..||+|+||..++.
T Consensus        78 V~p~~rg~GiG~~Ll~~~~~~a~~~G~~~i~L~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~fY~k~Gf~~~g~  157 (180)
T d1n71a_          78 VESSRRKNQIGTRLVNYLEKEVASRGGITIYLGTDDLDHGTTLSQTDLYEHTFDKVASIQNLREHPYEFYEKLGYKIVGV  157 (180)
T ss_dssp             ECTTSCSSSHHHHHHHHHHHHHHHTTCCEEEEEEECSSSCBTTSSSCTTSSHHHHHHTCCBSSCCTHHHHHHTTCEEEEE
T ss_pred             EchHHhccHHHHHHHHHHHHHHHHCCCCEEEEEecCcccccchhhhhcccccccccchhccccHHHHHHHHHCCCEEEee
Confidence            99999999999999999999999999999999874                            24899999999999986


Q ss_pred             ccccccCCCCCCCceeEEE
Q 009150          219 VSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       219 ~~~~~~~~~~~c~ea~lm~  237 (542)
                      ...+  |+-+  ....+|.
T Consensus       158 ~~~~--~g~~--~~~~~m~  172 (180)
T d1n71a_         158 LPNA--NGWD--KPDIWMA  172 (180)
T ss_dssp             ETTT--TSTT--CCEEEEE
T ss_pred             ecCC--CCCC--CCcEEEE
Confidence            5433  3222  1255666

>d1kzyc1 c.15.1.4 (C:1714-1866) 53BP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: 53BP1
domain: 53BP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=5.4e-13  Score=121.83  Aligned_cols=73  Identities=18%  Similarity=0.252  Sum_probs=66.4

Q ss_pred             HHHHHHHHHHcCcEEeccC-------CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCCCCcccCCch
Q 009150          412 KVHLTKVIEDLGGAVTSDG-------STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSYMLNDDD  484 (542)
Q Consensus       412 k~~L~kiIkkLGG~V~~d~-------~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdEe~YeL~d~~  484 (542)
                      +..+...|+.+||.+.++.       ..++|||++++.||.|||+|+|.|+|||+++||.+|+++|+++||++|.|....
T Consensus        60 ~~~~~~~i~~~gg~v~~~~~~~~~~~~~~~~LIa~~~~RT~Kyl~Ala~g~piv~~~Wi~~c~~~~~~ld~~~YlLpag~  139 (153)
T d1kzyc1          60 KQYTESQLRAGAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGY  139 (153)
T ss_dssp             HHHHHHHHHTTTCEECSSCCTTTTTTTCEEEEEESSCCCSHHHHHHHHHTCCEEETHHHHHHHHHTSCCCGGGSBCCCEE
T ss_pred             hhhhhhhhhhcCCeEeeccccccccccceEEEecCCCCchHHHHHHHccCCcEEcHHHHHHHHHcCCcCChHHccCCCCC
Confidence            4568899999999998864       347899999999999999999999999999999999999999999999997654

>d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase BC2806
species: Bacillus cereus [TaxId: 1396]

Probab=99.35  E-value=1.2e-12  Score=114.91  Aligned_cols=84  Identities=17%  Similarity=0.180  Sum_probs=73.2

Q ss_pred             CCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCccccc
Q 009150          139 DDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADT  217 (542)
Q Consensus       139 ~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~  217 (542)
                      +++++|||++.+...+   ..++|..++|+|+|||+|+|+.|++++++.+++.|+.++.+.+.+ .|..||+|+||+.++
T Consensus        46 ~~~~~ivG~~~~~~~~---~~~~i~~l~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~~n~~A~~fY~k~GF~~~g  122 (140)
T d1y9wa1          46 NEEGKIFGGVTGTMYF---YHLHIDFLWVDESVRHDGYGSQLLHEIEGIAKEKGCRLILLDSFSFQAPEFYKKHGYREYG  122 (140)
T ss_dssp             CTTCCEEEEEEEEEET---TEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEE
T ss_pred             eCCCcEEEEEEEEEec---CeeEEEEEEECccccCCCcHHHHHHHHHHHHHhccceEEEEeechhhHHHHHHhCCCEEEE
Confidence            4788999999887765   368899999999999999999999999999999999999998865 599999999999988


Q ss_pred             cccccccCCCC
Q 009150          218 AVSLKFCFPVK  228 (542)
Q Consensus       218 ~~~~~~~~~~~  228 (542)
                      ..   +.||.+
T Consensus       123 ~~---~~~~~~  130 (140)
T d1y9wa1         123 VV---EDHPKG  130 (140)
T ss_dssp             EE---SSCSTT
T ss_pred             EE---CCCCCC
Confidence            64   345554

>d1bo4a_ d.108.1.1 (A:) Aminoglycoside 3-N-acetyltransferase {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Aminoglycoside 3-N-acetyltransferase
species: Serratia marcescens [TaxId: 615]

Probab=99.34  E-value=2e-12  Score=110.72  Aligned_cols=126  Identities=17%  Similarity=0.268  Sum_probs=95.2

Q ss_pred             EeeCCCCccccchhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeecc-
Q 009150           76 VLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVP-  154 (542)
Q Consensus        76 ~~~~~~~~~~~~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~-  154 (542)
                      .-+.|.|+      ..|..+.++|...+..+.+.+..-...+|+.+..-+..+..++..     ++++|||.+.+.+.+ 
T Consensus         6 ~r~~P~d~------~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~~~~ivG~~~~~~~~~   74 (137)
T d1bo4a_           6 CRLGPDQV------KSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAF-----DQEAVVGALAAYVLPK   74 (137)
T ss_dssp             EECCTTCH------HHHHHHHHHHHHHTTCHHHHHSSCCCHHHHHHHHHSSSEEEEEEE-----ETTEEEEEEEEEEEEC
T ss_pred             EeCCHhhH------HHHHHHHHHHHHHhcchhhhccCCCcHHHHHHhhcCCCeEEEEEE-----ECCeeeeecccccccC
Confidence            34567666      334455667887777777666666667788777444444333222     467999988776654 


Q ss_pred             --CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcC
Q 009150          155 --ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQD  212 (542)
Q Consensus       155 --~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqG  212 (542)
                        .....++|..++|+|++||+|||++|++++.+.++..|+..|.+.+..   .|..||+|+|
T Consensus        75 ~~~~~~~~~i~~l~V~p~~Rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~~~G  137 (137)
T d1bo4a_          75 FEQPRSEIYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLG  137 (137)
T ss_dssp             SSSSCEEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHHTCCEEEEECCCSCCSSEEEEEEC-
T ss_pred             ccCCCCEEEEEEEEEcHHHhhhchhhHHHHHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHhcC
Confidence              445788999999999999999999999999999999999999998865   4999999998

>d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: IAA acetyltransferase
species: Bacillus cereus [TaxId: 1396]

Probab=99.32  E-value=2.1e-12  Score=116.33  Aligned_cols=78  Identities=14%  Similarity=0.119  Sum_probs=68.5

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++|++||++.+...  +...++|..++|+|+|||+|||++|++++++.+++.|+..+.+.+..   .|..||+|+||+..
T Consensus        42 ~~g~ivG~~~~~~~--~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~t~~~n~~a~~fY~k~GF~~~  119 (152)
T d1y9ka1          42 QGGSVIGVYVLLET--RPKTMEIMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIF  119 (152)
T ss_dssp             CSSSEEEEEEEEEC--STTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             ECCEEEEEEEEEEc--CCCEEEEEEEEEcHHHCCCCcchHHHHHHHHHHHHcCCceEEEEeccCCHHHHHHHHHCCCEEE
Confidence            57899998765433  44689999999999999999999999999999999999999987765   38899999999998


Q ss_pred             ccc
Q 009150          217 TAV  219 (542)
Q Consensus       217 ~~~  219 (542)
                      +..
T Consensus       120 ~~~  122 (152)
T d1y9ka1         120 SID  122 (152)
T ss_dssp             EEE
T ss_pred             eEE
Confidence            866

>d1y7ra1 d.108.1.1 (A:1-133) Hypothetical protein SA2161 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein SA2161
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.31  E-value=2.1e-12  Score=113.14  Aligned_cols=76  Identities=16%  Similarity=0.186  Sum_probs=64.9

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEE--EEccccchhhhhhcCccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIF--CWGDKESEGFWHKQDTSADT  217 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~--l~a~~~A~~Fw~KqGF~~~~  217 (542)
                      ++|++||.+.+...  ...+++|..++|+|+|||+|||+.|++++++.+++.|+..+.  +.+++.|..||+|+||+..+
T Consensus        46 ~~~~~vG~~~~~~~--~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~g~~~~~l~~~a~~~a~~fY~k~GF~~~~  123 (133)
T d1y7ra1          46 DKDRLIGMGRVIGD--GGTVFQIVDIAVLKSYQGQAYGSLIMEHIMKYIKNVSVESVYVSLIADYPADKLYVKFGFMPTE  123 (133)
T ss_dssp             ETTEEEEEEEEEEC--SSSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHCCTTCEEEEEEETTHHHHHHTTTCEECT
T ss_pred             ECCEEEEEEEEEec--cCCEEEEEEEEEeecccchHHHHHHHHHHHHHHHHcCCCEEEEEEcCChHHHHHHHHCCCEEeC
Confidence            46799998755443  335899999999999999999999999999999999998765  45666799999999999865

>d1yvka1 d.108.1.1 (A:5-156) Hypothetical protein YvbK (BSu33890) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein YvbK (BSu33890)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.31  E-value=2.6e-12  Score=115.86  Aligned_cols=96  Identities=18%  Similarity=0.145  Sum_probs=82.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      .+|++||.+.+...++  .+++|..++|+|++||+|+|++|++++.+++++.|++++.+.+..   .|.+||+|+||+..
T Consensus        42 ~~g~ivG~~~~~~~~~--~~~~l~~i~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~~~l~~~~~n~~a~~fYek~GF~~~  119 (152)
T d1yvka1          42 AGDELAGVYVLLKTRP--QTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGTGNSSIHQLSLYQKCGFRIQ  119 (152)
T ss_dssp             ETTEEEEEEEEEECST--TEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             ECCEEEEEEEEEecCC--CEEEEEEeeeCHhHcCCCcccHHHHHHHHHhhhhcccccceeeccCCHHHHHHHHHCCCEEE
Confidence            4689999988776654  489999999999999999999999999999999999999988766   38999999999999


Q ss_pred             ccc-------cccccC-CCCCCCceeEEE
Q 009150          217 TAV-------SLKFCF-PVKPCEKSSLVT  237 (542)
Q Consensus       217 ~~~-------~~~~~~-~~~~c~ea~lm~  237 (542)
                      +..       ..++.| .+.+|+.+.+|-
T Consensus       120 ~~~~~~~~~~~~~~~~e~g~~~~~~~~m~  148 (152)
T d1yvka1         120 AIDHDFFLRHYDEDIFENGIQCRDMVRLY  148 (152)
T ss_dssp             EEETTHHHHSCSSCEEETTEEECCEEEEE
T ss_pred             EEEcCccccCCCCcccccCcceeeeeeee
Confidence            865       345556 444788888886

>d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Tabtoxin resistance protein
species: Pseudomonas syringae [TaxId: 317]

Probab=99.30  E-value=3.3e-12  Score=115.69  Aligned_cols=98  Identities=16%  Similarity=0.129  Sum_probs=81.0

Q ss_pred             CCCcEEEEEEeeecc--CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc--ccchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVP--ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD--KESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~--~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~--~~A~~Fw~KqGF~~  215 (542)
                      ++|+|||.+.+...+  .+...++|..++|+|+|||+|||++|++++++.+++.|+..+.|...  +.|..||+|+||+.
T Consensus        66 ~~~~ivG~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~l~L~~~~n~~a~~fY~k~GF~~  145 (170)
T d1ghea_          66 EDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSALAYTR  145 (170)
T ss_dssp             ETTEEEEEEEEEECCSTTCTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTSHHHHHHHHTTCEE
T ss_pred             ECCEEEEEEEEeeccccCCCcEEEEEEEEEcchhhcCCcHHHHHHHHHHHHHHcCCceEeeecccchHHHHHHHHCCCEE
Confidence            478999998877665  33367999999999999999999999999999999999999987544  35899999999999


Q ss_pred             cccccccccCCCCCCCceeEEE
Q 009150          216 DTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       216 ~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      .+.+..-...|+|....+.+|.
T Consensus       146 ~g~~~~y~~~~~g~~~d~~~~~  167 (170)
T d1ghea_         146 VGELPGYCATPDGRLHPTAIYF  167 (170)
T ss_dssp             EEEEEEEEECTTSCEEEEEEEE
T ss_pred             EEEeCCceECCCCCEEEEEEEE
Confidence            9988555566776455566665

>d2atra1 d.108.1.1 (A:1-137) Probable acetyltransferase SP0256 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase SP0256
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.30  E-value=1.4e-12  Score=113.88  Aligned_cols=78  Identities=19%  Similarity=0.138  Sum_probs=69.1

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      ++++|||.+.+...  ...+++|..++|+|+|||+|||++|++++++.+++.|+..+.+.++..|..||+|+||+.++..
T Consensus        49 ~~~~ivG~~~~~~~--~~~~~~i~~l~V~~~~rg~GiG~~Ll~~~~~~~~~~~~~~i~l~~~~~a~~fY~k~GF~~~~~~  126 (137)
T d2atra1          49 DGDAVVGLIRLVGD--GFSSVFVQDLIVLPSYQRQGIGSSLMKEALGNFKEAYQVQLATEETEKNVGFYRSMGFEILSTY  126 (137)
T ss_dssp             ETTEEEEEEEEEEC--SSSEEEEEEEEECTTSCSSSHHHHHHHHHHGGGTTCSEEECCCCCCHHHHHHHHHTTCCCGGGG
T ss_pred             ECCEEEEEEEEEcc--CCceEEEEEEEEEHHHcCchHHHHHHHHHHHHHHHCCCeEEEEeecHHHHHHHHhCCCEECccC
Confidence            46799998755443  3458999999999999999999999999999999999999998888889999999999988765

>d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Glucosamine-phosphate N-acetyltransferase GNA1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.30  E-value=2.3e-12  Score=112.45  Aligned_cols=79  Identities=24%  Similarity=0.182  Sum_probs=71.2

Q ss_pred             CCCcEEEEEEeeeccC----CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~----d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~  215 (542)
                      .+++|||.+.+.+.+.    +...++|..++|+|+|||+|||+.||+++++++++.|+..+.+.++..+..||+|+||+.
T Consensus        69 ~~~~ivG~~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~Gig~~L~~~~~~~a~~~g~~~i~l~~~~~~~~~Y~k~GF~~  148 (157)
T d1i12a_          69 RTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKCGFSN  148 (157)
T ss_dssp             TTTEEEEEEEEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHTTCEE
T ss_pred             ECCEEEEEEEEeccccccccCcceeEEEEEEecHhhcCCCchHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHhCCCEE
Confidence            6789999988876652    336899999999999999999999999999999999999999999889999999999998


Q ss_pred             ccc
Q 009150          216 DTA  218 (542)
Q Consensus       216 ~~~  218 (542)
                      .+.
T Consensus       149 ~g~  151 (157)
T d1i12a_         149 AGV  151 (157)
T ss_dssp             EEE
T ss_pred             eeE
Confidence            763

>d1q2ya_ d.108.1.1 (A:) Probable acetyltransferase YjcF {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase YjcF
species: Bacillus subtilis [TaxId: 1423]

Probab=99.27  E-value=3.4e-12  Score=113.55  Aligned_cols=76  Identities=17%  Similarity=0.232  Sum_probs=69.5

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTA  218 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~  218 (542)
                      +++++||++.+...+   .+++|..+||+++|||+|||+.|++++.+.+++.|+..|+|.+...|..||+|+||++.++
T Consensus        49 ~~~~~vg~~~~~~~~---~~~~i~~l~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~a~~~a~~fY~k~GF~~~~~  124 (140)
T d1q2ya_          49 DGEKPVGAGRWRMKD---GYGKLERICVLKSHRSAGVGGIIMKALEKAAADGGASGFILNAQTQAVPFYKKHGYRVLSE  124 (140)
T ss_dssp             ETTEEEEEEEEEEET---TEEEEEEEECCGGGTTTTHHHHHHHHHHHHHHHTTCCSEEEEEEGGGHHHHHHTTCEESCS
T ss_pred             ccccEEEEEeeeccc---ceeeEeeeEEchhhcCCcHHHHHHHHHHHHHHHcCCCceEEeCCHHHHHHHHHCcCEEcCC
Confidence            477899988776643   4899999999999999999999999999999999999999999888999999999999875

>d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase PF0028
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.26  E-value=5.8e-12  Score=110.91  Aligned_cols=99  Identities=11%  Similarity=0.103  Sum_probs=77.3

Q ss_pred             ccceeeeecccceeEEEeeecccCCCCcEEEEEEeeecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcC
Q 009150          116 SMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG  192 (542)
Q Consensus       116 ~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~G  192 (542)
                      ++++...+.+..+.-++..    .++|+|||.+.+.+.+   ....+++|..++|+|++||+|+|++||+++.+.+++.|
T Consensus        40 ~~~~~~~~~~~~~~~~v~~----~~~g~ivG~~~~~~~~~~~~~~~~~~i~~l~V~~~~Rg~GiG~~Ll~~~~~~a~~~g  115 (149)
T d1vkca_          40 EELFESLLSQGEHKFFVAL----NERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERG  115 (149)
T ss_dssp             HHHHHHHHHSSEEEEEEEE----ETTCCEEEEEEEEEEECTTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhCCCceEEEEE----ecCCeEEEEEEEEeccCCCCCCcEEEEEEEEECHHHcCCChHHHHHHHHHHHHHHCC
Confidence            3445555445554443332    2578999988765543   44478999999999999999999999999999999999


Q ss_pred             CcEEEEEccc--cchhhhhhcCcccccc
Q 009150          193 IRTIFCWGDK--ESEGFWHKQDTSADTA  218 (542)
Q Consensus       193 I~~I~l~a~~--~A~~Fw~KqGF~~~~~  218 (542)
                      ++.|.|.+..  .|..||+|+||+....
T Consensus       116 ~~~i~L~v~~~n~A~~~Y~k~GF~~~~~  143 (149)
T d1vkca_         116 AKKIVLRVEIDNPAVKWYEERGYKARAL  143 (149)
T ss_dssp             CSCEEECCCTTCTHHHHHHHTTCCCCCC
T ss_pred             CCEEEEEECCCCHHHHHHHHCCCEEEEE
Confidence            9999887554  4999999999997653

>d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Aminoglycoside N-acetyltransferase AAC(6')-IY
species: Salmonella enteritidis [TaxId: 149539]

Probab=99.24  E-value=1.4e-11  Score=106.53  Aligned_cols=80  Identities=15%  Similarity=0.131  Sum_probs=69.8

Q ss_pred             CCCcEEEEEEeeecc------CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhh
Q 009150          140 DDDVVVAAITYQIVP------ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHK  210 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~------~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K  210 (542)
                      +++++||.+.+.+.+      ...++++|..++|+|+|||+|||+.|++.+++++++.|+..|.+.+...   |..||+|
T Consensus        52 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~fY~k  131 (147)
T d1s3za_          52 ADGVAIGFADASIRHDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQA  131 (147)
T ss_dssp             ETTEEEEEEEEEEECSCCTTCSSSSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHH
T ss_pred             ECCEEEEEEEEEeecCcccccCCCCeEEEEEEEECHHHcCCcHHHHHHHHHHHHhhhccccceEEEEcCCCHHHHHHHHH
Confidence            478999988877654      2237899999999999999999999999999999999999998887753   8999999


Q ss_pred             cCccccccc
Q 009150          211 QDTSADTAV  219 (542)
Q Consensus       211 qGF~~~~~~  219 (542)
                      +||+..+.+
T Consensus       132 ~GF~~~~~~  140 (147)
T d1s3za_         132 LGFEETERV  140 (147)
T ss_dssp             TTCEEEEEE
T ss_pred             CCCEEECeE
Confidence            999887755

>d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein YsnE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.20  E-value=8.4e-12  Score=112.77  Aligned_cols=77  Identities=9%  Similarity=0.071  Sum_probs=68.6

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc--c---cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD--K---ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~--~---~A~~Fw~KqGF~  214 (542)
                      ++|++||++.+...+.+  .++|..++|+|+|||+|+|++||.++++.+++.|++.+.|.+.  +   .|..||+|+||+
T Consensus        53 ~~~~~vG~~~~~~~~~~--~~~i~~~~V~p~~Rg~Glg~~Ll~~~~~~A~~~g~~~i~L~t~~~~~n~~A~~lY~k~GF~  130 (151)
T d1yx0a1          53 EGDELAGCGALKELDTR--HGEIKSMRTSASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQ  130 (151)
T ss_dssp             CSSSEEEEEEEEEEETT--EEECCCCCCSTTTCCSCHHHHHHHHHHHHHHHHTCSCEECCCSSCTTHHHHHHHHHTTSEE
T ss_pred             ECCEEEEEEEEEeccCc--eEEEEeeeeCHHHHhCChhHHHHHHHHHHHHHCCCcEEEEEeccccchHHHHHHHHHcCCE
Confidence            67899999988776655  8999999999999999999999999999999999999998752  2   389999999999


Q ss_pred             cccc
Q 009150          215 ADTA  218 (542)
Q Consensus       215 ~~~~  218 (542)
                      .++.
T Consensus       131 ~~~~  134 (151)
T d1yx0a1         131 YCEP  134 (151)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            8763

>d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase YycN
species: Bacillus subtilis [TaxId: 1423]

Probab=99.19  E-value=3.3e-11  Score=103.30  Aligned_cols=79  Identities=15%  Similarity=0.151  Sum_probs=70.4

Q ss_pred             CCCcEEEEEEeeecc-CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVP-ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      +++.+||.+.+...+ .....++|..++|+|+|||+|||+.|+..+.+.+++.|+.+|.+.+..   .|..||+|+||+.
T Consensus        67 ~~~~~ig~~~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~  146 (155)
T d1ufha_          67 NEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQE  146 (155)
T ss_dssp             SSSCEEEEEEEEECTTCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHHHHTTCCC
T ss_pred             cCCeEEEEEEEEeeccCCCCceEEEEEEEEHHHcCCcccchHHHHHHHHhhhcCCceeEEEEcCCCHHHHHHHHHCCCEE
Confidence            678999999888776 334688999999999999999999999999999999999999888765   3899999999998


Q ss_pred             ccc
Q 009150          216 DTA  218 (542)
Q Consensus       216 ~~~  218 (542)
                      .+.
T Consensus       147 ~g~  149 (155)
T d1ufha_         147 TDV  149 (155)
T ss_dssp             CCC
T ss_pred             EeE
Confidence            874

>d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PH0736
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.18  E-value=2.5e-11  Score=110.59  Aligned_cols=78  Identities=18%  Similarity=0.213  Sum_probs=64.7

Q ss_pred             CCCcEEEEEEeeecc-------------CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---c
Q 009150          140 DDDVVVAAITYQIVP-------------ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---E  203 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-------------~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~  203 (542)
                      ++|+|||++.+....             .+..+++|..++|+|+|||+|||+.||+++++.+++.|+. +++.+..   .
T Consensus        74 ~d~~ivG~~~l~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~~~~~ak~~G~~-~~l~~~~~n~~  152 (182)
T d2gana1          74 KDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTLLEFAVKRLRSLGKD-PYVVTFPNLEA  152 (182)
T ss_dssp             ESSCEEEEEEEECSCGGGTCCTTCCGGGCSTTEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCE-EEEEECGGGSH
T ss_pred             ECCEEEEEEEEeccCcccccccccccccCCCCEEEEEEEEECHhhcCCCHHHHHHHHHHHHHHHcCCe-EEEEEccCCHH
Confidence            478999998776432             2457899999999999999999999999999999999987 5444433   4


Q ss_pred             chhhhhhcCcccccc
Q 009150          204 SEGFWHKQDTSADTA  218 (542)
Q Consensus       204 A~~Fw~KqGF~~~~~  218 (542)
                      |..||+|+||+.+.+
T Consensus       153 a~~fY~k~GF~~~~~  167 (182)
T d2gana1         153 YSYYYMKKGFREIMR  167 (182)
T ss_dssp             HHHHHHTTTEEEEEC
T ss_pred             HHHHHHHCCCEEeeE
Confidence            899999999988653

>d1wwza1 d.108.1.1 (A:1-157) Hypothetical protein PH1933 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PH1933
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.17  E-value=3.1e-11  Score=104.49  Aligned_cols=80  Identities=16%  Similarity=0.101  Sum_probs=65.6

Q ss_pred             CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEc-cc-cchhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWG-DK-ESEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a-~~-~A~~Fw~KqGF  213 (542)
                      .++++||.+.+...+    .+..+++|..++|+|+|||+|||+.|++++.+++++.|.....++. .+ .|..||+|+||
T Consensus        62 ~~~~~vg~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~~~~~~~v~~~N~~a~~~Y~k~GF  141 (157)
T d1wwza1          62 VGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYNDTIELWVGEKNYGAMNLYEKFGF  141 (157)
T ss_dssp             ETTEEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTC
T ss_pred             ECCEEEEEEEeeccccccccCCcEEEEEEEEEEehhccchhHHHHHHHHHHHHHHhCCceEEEEcCCCHHHHHHHHHCCC
Confidence            477899988876543    4457899999999999999999999999999999999976544332 22 49999999999


Q ss_pred             cccccc
Q 009150          214 SADTAV  219 (542)
Q Consensus       214 ~~~~~~  219 (542)
                      +.+++.
T Consensus       142 ~~~g~~  147 (157)
T d1wwza1         142 KKVGKS  147 (157)
T ss_dssp             EEEEEE
T ss_pred             EEEeEE
Confidence            998754

>d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative regulatory protein PaiA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Protease synthase and sporulation negative regulatory protein PaiA
species: Bacillus subtilis [TaxId: 1423]

Probab=99.16  E-value=6.6e-11  Score=106.31  Aligned_cols=79  Identities=14%  Similarity=0.132  Sum_probs=69.2

Q ss_pred             CCCcEEEEEEeeecc-----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhc
Q 009150          140 DDDVVVAAITYQIVP-----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQ  211 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~Kq  211 (542)
                      .+|++||.+.+...+     .....++|..++|+|+|||+|||+.||+++++.+++.|+..|.+.+..   .|..||+|+
T Consensus        65 ~~~~ivG~~~~~~~~~~~~~~~~~~~~i~~i~v~~~~rgkGig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~fY~k~  144 (173)
T d1tiqa_          65 FDHEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKM  144 (173)
T ss_dssp             ETTEEEEEEEEEEGGGSSSCCCTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT
T ss_pred             ECCEecceEEEEecCccccccCCCeEEEEEEEECHHHcCCCCCcchhHhhhhhhhhhhcchhhccccccCHHHHHHHHHC
Confidence            468999988877654     233688999999999999999999999999999999999999887654   499999999


Q ss_pred             Ccccccc
Q 009150          212 DTSADTA  218 (542)
Q Consensus       212 GF~~~~~  218 (542)
                      ||+..++
T Consensus       145 GF~~~g~  151 (173)
T d1tiqa_         145 GFVQTGA  151 (173)
T ss_dssp             TCEEEEE
T ss_pred             CCEEeeE
Confidence            9999885

>d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase EF1919
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.15  E-value=5.1e-11  Score=104.62  Aligned_cols=80  Identities=20%  Similarity=0.312  Sum_probs=71.0

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++++++|++.+...+ +...++|..++|+++|||+|||+.|++++++++++.|+..|.+.+..   .|..||+|+||+.+
T Consensus        57 ~~~~~~g~~~~~~~~-~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~v  135 (157)
T d2fiaa1          57 HEEMIFSMATFCMEQ-EQDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKI  135 (157)
T ss_dssp             ETTEEEEEEEEEECT-TCSEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             ECCEEEEEEEEeecC-ccceeeecccEECHHHcCCCCcchhhHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHHCCCEEe
Confidence            467899998877665 44689999999999999999999999999999999999999988765   49999999999999


Q ss_pred             cccc
Q 009150          217 TAVS  220 (542)
Q Consensus       217 ~~~~  220 (542)
                      ++..
T Consensus       136 ~e~~  139 (157)
T d2fiaa1         136 HESL  139 (157)
T ss_dssp             EEEC
T ss_pred             eeEC
Confidence            8773

>d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Serotonin N-acetyltranferase
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=99.14  E-value=6.8e-11  Score=104.07  Aligned_cols=80  Identities=14%  Similarity=0.170  Sum_probs=67.3

Q ss_pred             CCCcEEEEEEeeec-------------cCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccccch
Q 009150          140 DDDVVVAAITYQIV-------------PADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDKESE  205 (542)
Q Consensus       140 ~~~~VIg~i~~~i~-------------~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~~A~  205 (542)
                      .+++++|.+.....             +++.++++|..++|+|+|||+|||+.||+++.+++++. |+..+.+.+++.|.
T Consensus        57 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~~~~~~i~l~~~~~ai  136 (166)
T d1cjwa_          57 VEGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALV  136 (166)
T ss_dssp             ETTEEEEEEEEEEECSSSCCGGGGGCCCTTCCEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTSTTCCEEEEEECGGGH
T ss_pred             ECCceeeeecccccccccchhhhhhcccCCCCEEEEEEEEECHHHccCCHHHHHHHHHHHHHHHhCCCceEEEecCHHHH
Confidence            36788887654432             23446899999999999999999999999999999886 68889988888899


Q ss_pred             hhhhhcCccccccc
Q 009150          206 GFWHKQDTSADTAV  219 (542)
Q Consensus       206 ~Fw~KqGF~~~~~~  219 (542)
                      .||+|+||+.+++.
T Consensus       137 ~fY~k~GF~~~G~~  150 (166)
T d1cjwa_         137 PFYQRFGFHPAGPC  150 (166)
T ss_dssp             HHHHTTTEEEEEEC
T ss_pred             HHHHHCCCEEEcce
Confidence            99999999999853

>d2fiwa1 d.108.1.1 (A:2-157) Probable N-acetyltransferase RPA1999 {Rhodopseudomonas palustris [TaxId: 1076]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable N-acetyltransferase RPA1999
species: Rhodopseudomonas palustris [TaxId: 1076]

Probab=99.14  E-value=3.5e-11  Score=107.15  Aligned_cols=74  Identities=18%  Similarity=0.138  Sum_probs=65.4

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV  219 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~  219 (542)
                      .+|+|||.+.+.  +    ..+|..++|+|+|||+|||++||+++++.+++.|+..+.+.++..|..||+|+||+..++.
T Consensus        65 ~~~~ivG~~~~~--~----~~~i~~l~V~p~~~g~GiG~~Ll~~~~~~a~~~g~~~l~~~~~~~A~~fY~k~GF~~~~~~  138 (156)
T d2fiwa1          65 LQGVPVGFASLK--G----PDHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASDNAAEFFAKRGYVAKQRN  138 (156)
T ss_dssp             ETTEEEEEEEEE--T----TTEEEEEEECGGGCSSSHHHHHHHHHHHHHHTTTCSEEEEEECTTTHHHHHTTTCEEEEEE
T ss_pred             ECCEEEEEEeec--c----chhHHHHhccHHHcCCCHHHHHHHHHHHHHHhcCCCEEEEEeccchhHHHHhCCCEEEEEE
Confidence            468999987553  3    2479999999999999999999999999999999999999998889999999999987653

>d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable N-acetyltransferase PA0478
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.14  E-value=4.6e-11  Score=105.83  Aligned_cols=80  Identities=11%  Similarity=0.016  Sum_probs=68.2

Q ss_pred             CCCcEEEEEEeeecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcCc
Q 009150          140 DDDVVVAAITYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQDT  213 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqGF  213 (542)
                      .+|++||.+.+...+   .....++|..++|+|+|||+|||++|+.++.+++++.|+.++.+.+...   |..||+|+||
T Consensus        56 ~~~~ivG~~~~~~~~~~~~~~~~~~i~~~~V~p~~Rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF  135 (156)
T d2fe7a1          56 SEGRPIGYAVFFYSYSTWLGRNGIYLEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGA  135 (156)
T ss_dssp             ETTEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGCC--HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTC
T ss_pred             eCCEEEEEEeEeecccccccCCeEEeeeeeechhhhccChHHHHHHHHHHHHHHccCCcceEEEcCCCHHHHHHHHHCCC
Confidence            578999988777765   3457899999999999999999999999999999999999998877763   8999999999


Q ss_pred             cccccc
Q 009150          214 SADTAV  219 (542)
Q Consensus       214 ~~~~~~  219 (542)
                      +...+.
T Consensus       136 ~~~~~~  141 (156)
T d2fe7a1         136 LPQDEW  141 (156)
T ss_dssp             EECTTE
T ss_pred             EEcCcE
Confidence            987653

>d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase PA4026
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.12  E-value=3.2e-11  Score=105.31  Aligned_cols=101  Identities=11%  Similarity=0.008  Sum_probs=77.8

Q ss_pred             ccceeeeecccceeEEEeeecccCCCCcEEEEEEeeecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcC
Q 009150          116 SMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG  192 (542)
Q Consensus       116 ~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~G  192 (542)
                      ..|+...+.+...... .+ + .++++++||.+.+...+   .....++|..++|+|.+||+|+|+.|++++.+.+++.|
T Consensus        35 ~~~~~~~~~~~~~~~~-~~-~-~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~~~V~~~~r~~Gig~~Ll~~~~~~ak~~g  111 (153)
T d2euia1          35 RKFLEKRLRRKESVIY-LA-L-ADEEDRLLGFCQLYPSFSSLSLKRVWILNDIYVAEEARRQLVADHLLQHAKQMARETH  111 (153)
T ss_dssp             HHHHHHHHHHTCSEEE-EE-E-CSSSCCEEEEEEEEEEEETTTTEEEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhCCCCcEE-EE-E-EecCCeEEEEEeeecccccccccceEEecceeeeecccCcchhhHHHHHHhhhHHHhh
Confidence            4466555444332222 22 1 23678999988776554   33467899999999999999999999999999999999


Q ss_pred             CcEEEEEccc---cchhhhhhcCccccccc
Q 009150          193 IRTIFCWGDK---ESEGFWHKQDTSADTAV  219 (542)
Q Consensus       193 I~~I~l~a~~---~A~~Fw~KqGF~~~~~~  219 (542)
                      +..|.+.+..   .|..||+|+||+..++.
T Consensus       112 ~~~i~l~~~~~N~~a~~~Y~k~GF~~~~~~  141 (153)
T d2euia1         112 AVRMRVSTSVDNEVAQKVYESIGFREDQEF  141 (153)
T ss_dssp             EEEEEEEEETTCHHHHHHHHTTTCBCCCSB
T ss_pred             hccceEEecCCCHHHHHHHHHCCCEEcceE
Confidence            9999888776   39999999999986653

>d1vhsa_ d.108.1.1 (A:) Putative phosphinothricin acetyltransferase YwnH {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative phosphinothricin acetyltransferase YwnH
species: Bacillus subtilis [TaxId: 1423]

Probab=99.12  E-value=6.6e-11  Score=104.94  Aligned_cols=98  Identities=18%  Similarity=0.154  Sum_probs=75.2

Q ss_pred             cCCCCcEEEEEEeeeccCCC---ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhc
Q 009150          138 MDDDDVVVAAITYQIVPADT---QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQ  211 (542)
Q Consensus       138 ~~~~~~VIg~i~~~i~~~d~---~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~Kq  211 (542)
                      ..++++|||.+.+..+.+..   ..+++ .++|+|+|||+|||+.|++++++.+++.|+++|.+.+..   .|..||+|+
T Consensus        57 ~~~~~~ivG~~~~~~~~~~~~~~~~~~~-~~~v~~~~rg~Gig~~l~~~~~~~~~~~g~~~i~~~v~~~N~~a~~~y~k~  135 (165)
T d1vhsa_          57 EDENGNVAAWISFETFYGRPAYNKTAEV-SIYIDEACRGKGVGSYLLQEALRIAPNLGIRSLMAFIFGHNKPSLKLFEKH  135 (165)
T ss_dssp             ECTTSCEEEEEEEEESSSSGGGTTEEEE-EEEECGGGCSSSHHHHHHHHHHHHGGGGTCSEEEEEEETTCHHHHHHHHHT
T ss_pred             EecCCceEeeeeeeeccccccccceEEE-eeecCchhhcccccchhhhhhhhhhccccceeEEEEEecCCHHHHHHHHHC
Confidence            34678999988876654332   23444 588999999999999999999999999999999887665   389999999


Q ss_pred             CccccccccccccCCCCCCCceeEEE
Q 009150          212 DTSADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       212 GF~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      ||+..+...+.... .|-..+..+|.
T Consensus       136 GF~~~g~~~~~~~~-~g~~~D~~~m~  160 (165)
T d1vhsa_         136 GFAEWGLFPGIAEM-DGKRYDLKILG  160 (165)
T ss_dssp             TCEEEEEEEEEEEE-TTEEEEEEEEE
T ss_pred             CCEEEEEEcCeEEE-CCEEEEEEEEE
Confidence            99999877554333 33244456665

>d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Transcriptional regulator BH1968
species: Bacillus halodurans [TaxId: 86665]

Probab=99.12  E-value=3.9e-11  Score=104.16  Aligned_cols=79  Identities=18%  Similarity=0.211  Sum_probs=68.1

Q ss_pred             CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcC
Q 009150          140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQD  212 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqG  212 (542)
                      .+|+|||.+.+.+.+    .....++|..++|+|+|||+|||+.|++++++++++.|+..|.+.+..   .|..||+|+|
T Consensus        59 ~~g~iiG~~~~~~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~l~~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~G  138 (150)
T d1z4ea1          59 NGEEIVGMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLG  138 (150)
T ss_dssp             ETTEEEEEEEEEEEECSHHHHCEEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHHHT
T ss_pred             ECCceEEEEEEEeecccCcCCCCEEEEEEEEcCHHHcCCChhHHHHHHHHHHHHHcCCCEEEEEEcCCCHHHHHHHHHCC
Confidence            478999998776543    333688999999999999999999999999999999999999887754   4999999999


Q ss_pred             cccccc
Q 009150          213 TSADTA  218 (542)
Q Consensus       213 F~~~~~  218 (542)
                      |+...+
T Consensus       139 F~~~~~  144 (150)
T d1z4ea1         139 FKASHE  144 (150)
T ss_dssp             CEEEEE
T ss_pred             CEEcce
Confidence            987654

>d1xeba_ d.108.1.1 (A:) Hypothetical protein PA0115 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PA0115
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.12  E-value=4e-11  Score=108.14  Aligned_cols=80  Identities=13%  Similarity=0.113  Sum_probs=67.2

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCc-EEEEEccccchhhhhhcCcccccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIR-TIFCWGDKESEGFWHKQDTSADTA  218 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~-~I~l~a~~~A~~Fw~KqGF~~~~~  218 (542)
                      ++|+|||++-++........+.|.-+||+++|||+|||+.||+++++.+++.+.. .|.|.|...+.+||+|+||+..++
T Consensus        55 ~~~~~vg~~rl~~~~~~~~~~~i~rvaV~~~~Rg~GiG~~L~~~~l~~~~~~~~~~~i~l~A~~~a~~FY~k~GF~~~g~  134 (149)
T d1xeba_          55 RDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARGQGLGHQLMERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTE  134 (149)
T ss_dssp             ETTEEEEEEEEECSTTTTTCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHHTTCCEEEEEESTTHHHHHTTTEEECSC
T ss_pred             eCCeEEEEEEEeeccccCCcEEEEEEEEehhhhccChhHHHHHHHHHHHHHhCCCCEEEEeChHHHHHHHHHCCCEECCC
Confidence            4789999874443233334677999999999999999999999999999998765 588888778999999999999886


Q ss_pred             c
Q 009150          219 V  219 (542)
Q Consensus       219 ~  219 (542)
                      .
T Consensus       135 ~  135 (149)
T d1xeba_         135 V  135 (149)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase EF0945
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.11  E-value=5.3e-11  Score=105.81  Aligned_cols=61  Identities=13%  Similarity=0.111  Sum_probs=56.2

Q ss_pred             eeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcCccccccc
Q 009150          159 YAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQDTSADTAV  219 (542)
Q Consensus       159 ~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqGF~~~~~~  219 (542)
                      .+||..++|+|+|||+|||++|++++++.+++.|+..+.+.+...   |..||+|+||+.+++.
T Consensus       111 ~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~~l~v~~~N~~a~~~Yek~GF~~~~~~  174 (189)
T d1u6ma_         111 EWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTM  174 (189)
T ss_dssp             EEEEEEEEECGGGTTSSHHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHHHHHTTTCEEEEEE
T ss_pred             EEEEEEEEECHHHcCCCcCcchhHHHHHHHHhcCCceeEEEEcCCCHHHHHHHHHCCCEEEEEE
Confidence            478999999999999999999999999999999999998887653   7899999999999874

>d2cy2a1 d.108.1.1 (A:1-174) Probable acetyltransferase TTHA1209 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase TTHA1209
species: Thermus thermophilus [TaxId: 274]

Probab=99.10  E-value=1.9e-10  Score=102.14  Aligned_cols=81  Identities=23%  Similarity=0.272  Sum_probs=69.7

Q ss_pred             CCCCcEEEEEEeeecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcC
Q 009150          139 DDDDVVVAAITYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQD  212 (542)
Q Consensus       139 ~~~~~VIg~i~~~i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqG  212 (542)
                      .+++++||.+.+...+   .....++|..++|+|+|||+|||+.|++.+.+++++.|+.++.+.+..   .|..||+|+|
T Consensus        65 ~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~~~l~v~~~N~~a~~~y~k~G  144 (174)
T d2cy2a1          65 SESGEVVGFAAFGPDRASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHLG  144 (174)
T ss_dssp             CTTSCEEEEEEEEECCSCSCTTCCEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTT
T ss_pred             EcCCEEEeeeeccccccccccCCceEEEEEEEcHHHhhCCCchHHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHCC
Confidence            3678999988776655   223578899999999999999999999999999999999999886665   3899999999


Q ss_pred             ccccccc
Q 009150          213 TSADTAV  219 (542)
Q Consensus       213 F~~~~~~  219 (542)
                      |+..++.
T Consensus       145 F~~~g~~  151 (174)
T d2cy2a1         145 GVLLGER  151 (174)
T ss_dssp             CEEEEEE
T ss_pred             CEEEeEE
Confidence            9988864

>d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Phosphinothricin acetyltransferase
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.10  E-value=7.1e-11  Score=104.10  Aligned_cols=97  Identities=11%  Similarity=-0.036  Sum_probs=76.0

Q ss_pred             CCCcEEEEEEeeeccC--CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~--d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      .+|+|||.+.+....+  ....+++..++|+|+|||+|||++|++++++.+++.|++.+.+.+..   .|..||+|+||+
T Consensus        59 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~v~p~~rg~Glg~~ll~~~~~~a~~~g~~~l~~~v~~~N~~a~~~y~k~GF~  138 (163)
T d1yr0a1          59 LDGKVAGYASYGDWRAFDGYRHTREHSVYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAENTASIRLHESLGFR  138 (163)
T ss_dssp             ETTEEEEEEEEEESSSSGGGTTEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCE
T ss_pred             ECCeEEEeecceeecccccccceEEEEeeeeecccCCCCceeeeecccccccccccceEEEEEecCCHHHHHHHHHCCCE
Confidence            4789999877665542  22567788999999999999999999999999999999999876654   399999999999


Q ss_pred             ccccccccccCCCCCCCceeEEE
Q 009150          215 ADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       215 ~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      ..+...... |..|....+.+|.
T Consensus       139 ~~G~~~~~~-~~~g~~~D~~~m~  160 (163)
T d1yr0a1         139 VVGRFSEVG-TKFGRWLDLTCME  160 (163)
T ss_dssp             EEEEEEEEE-EETTEEEEEEEEE
T ss_pred             EEEEEeeeE-EECCEEEEEEEEE
Confidence            998775442 3333223367776

>d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: BRCT domain
domain: Breast cancer associated protein, BRCA1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=4.2e-11  Score=98.81  Aligned_cols=85  Identities=12%  Similarity=0.149  Sum_probs=68.1

Q ss_pred             CCeEEEEcc-cCChhhHHHHHHHHHHcCcEEeccC------CceeEEEECCC----CCcHHHHHHHhcCCeEeCHHHHHH
Q 009150          397 KCFRIMLMN-IADDSKKVHLTKVIEDLGGAVTSDG------STSTHVVTGKV----RKTLNFLTALCSGAWIVSPNWLKE  465 (542)
Q Consensus       397 k~~rVlfSG-~~de~kk~~L~kiIkkLGG~V~~d~------~~~THLIt~k~----~RTlKfL~AIA~G~wIVSpsWL~d  465 (542)
                      +++.|+|+| +.+.. +++|.++|+.+||+|+.+.      ..+||+|+...    ....+...|...|++||+|+||.|
T Consensus         5 ~g~~i~~~g~~~~~~-~~~L~~li~~~GG~v~~~~~~~~~~~~~t~~~i~~~~~~~~~~~~~~~~~~~~i~iV~~~Wl~d   83 (102)
T d1t15a2           5 RGLEICCYGPFTNMP-TDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTEDNGFHAIGQMCEAPVVTREWVLD   83 (102)
T ss_dssp             TTCEEEECSCCSSSC-HHHHHHHHHHTTCEECCSGGGCCCSTTCCEEEEECGGGCSSCGGGGSSTTTCSSCEEEHHHHHH
T ss_pred             CCcEEEEeCCCCCcC-HHHHHHHHHHhCCEEeeccccccccccccchheecccccchhhHHHHHHHhCCCcEEeeHHHHH
Confidence            468999999 55444 6789999999999998653      46788876541    233455567778999999999999


Q ss_pred             HHHcCCCCCCCCcccCC
Q 009150          466 SFREGRFVDESSYMLND  482 (542)
Q Consensus       466 Slk~Gk~LdEe~YeL~d  482 (542)
                      |+.+++.+|+++|.+..
T Consensus        84 si~~~~~lp~~~Yll~~  100 (102)
T d1t15a2          84 SVALYQCQELDTYLIPQ  100 (102)
T ss_dssp             HHHHTSCCCSGGGBCCC
T ss_pred             HHHhCCcCCchhccCCC
Confidence            99999999999998753

>d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Histone acetyltransferase HPA2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.07  E-value=2.5e-10  Score=98.95  Aligned_cols=79  Identities=13%  Similarity=0.127  Sum_probs=68.4

Q ss_pred             CCCCcEEEEEEeeeccC---CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcC
Q 009150          139 DDDDVVVAAITYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQD  212 (542)
Q Consensus       139 ~~~~~VIg~i~~~i~~~---d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqG  212 (542)
                      ..++.|||...+...+.   ....++|..++|+|++||+|||++|++++.+.+++.|+..|.+.+..   .|..||+|+|
T Consensus        58 ~~~~~ivg~~~~~~~~~~~~~~~~~~l~~l~v~~~~rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~G  137 (150)
T d1qsma_          58 SSSEKIIGMINFFNHMTTWDFKDKIYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKVG  137 (150)
T ss_dssp             SSSCCEEEEEEEEEECCTTCSSCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHHE
T ss_pred             hhcCcEEEEEEEeeccccccccchheehhhhhhhcccCccHHHHHHHHHHhhhcccccccceeEEccCCHHHHHHHHHcC
Confidence            46788999888776662   23678899999999999999999999999999999999999888876   4899999999


Q ss_pred             ccccc
Q 009150          213 TSADT  217 (542)
Q Consensus       213 F~~~~  217 (542)
                      |+...
T Consensus       138 Fk~~~  142 (150)
T d1qsma_         138 YKAPK  142 (150)
T ss_dssp             EECSE
T ss_pred             CCCcC
Confidence            98644

>d2fl4a1 d.108.1.1 (A:1-146) Probable spermine/spermidine acetyltransferase EF1086 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable spermine/spermidine acetyltransferase EF1086
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.07  E-value=1.6e-10  Score=100.86  Aligned_cols=89  Identities=8%  Similarity=0.037  Sum_probs=72.0

Q ss_pred             cccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHH-HcCCcEEEEEccc
Q 009150          124 LNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQ-SVGIRTIFCWGDK  202 (542)
Q Consensus       124 ~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk-~~GI~~I~l~a~~  202 (542)
                      .+..+..+.++     .++++||.+.++..+.+  .++|..++|+|+|||+|||++|++.+.+.+. ..|+..+.+.+..
T Consensus        41 ~~~~~~~~~i~-----~~~~~vG~~~~~~~~~~--~~~i~~~~v~~~~rgkGiG~~ll~~~~~~~~~~~~~~~i~l~v~~  113 (146)
T d2fl4a1          41 QFPEWESAGIY-----DGNQLIGYAMYGRWQDG--RVWLDRFLIDQRFQGQGYGKAACRLLMLKLIEKYQTNKLYLSVYD  113 (146)
T ss_dssp             HCTTEEEEEEE-----ETTEEEEEEEEEECTTS--CEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHSSCSEEEEEECT
T ss_pred             hCCCeEEEEEE-----ECCEEEEEEEEEEcCCC--eEEEeeEEEcHHHcCCChhhhhhhhhccccccccCceEEEeeccc
Confidence            34444445444     36789999988776654  6779999999999999999999999988665 4699999887666


Q ss_pred             c---chhhhhhcCccccccc
Q 009150          203 E---SEGFWHKQDTSADTAV  219 (542)
Q Consensus       203 ~---A~~Fw~KqGF~~~~~~  219 (542)
                      .   |..||+|+||+..+++
T Consensus       114 ~N~~a~~~Y~k~GF~~~g~~  133 (146)
T d2fl4a1         114 TNSSAIRLYQQLGFVFNGEL  133 (146)
T ss_dssp             TCHHHHHHHHHTTCEEEEEE
T ss_pred             ccHHHHHHHHHCCCEEeeEE
Confidence            3   9999999999999875

>d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase PA4794
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.05  E-value=4.7e-10  Score=98.64  Aligned_cols=98  Identities=11%  Similarity=0.087  Sum_probs=74.8

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      .+|++||.+.+...+ +..+++|..++|+|++||||||+.|+..+++++++. +++.+.+.+..   .|..||+|+||+.
T Consensus        57 ~~g~~vG~~~~~~~~-~~~~~~i~~~~V~p~~rgkGig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~GF~~  135 (160)
T d2i6ca1          57 HDGQVLGFANFYQWQ-HGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQP  135 (160)
T ss_dssp             ETTEEEEEEEEEEEE-TTTEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred             ECCEEEEEeeeeccc-cCCEEEEEEeEeCHhHcCCcchhhhhHHHHHHHHHhccccceeeecccccchhhhHHHhCCCEE
Confidence            368999998776654 446899999999999999999999999999999875 67878655443   4899999999998


Q ss_pred             cccccccccCCCCCCCceeEEEEeccc
Q 009150          216 DTAVSLKFCFPVKPCEKSSLVTVNRSL  242 (542)
Q Consensus       216 ~~~~~~~~~~~~~~c~ea~lm~l~~~~  242 (542)
                      ++....  -+|+|  ....+|.+.|.|
T Consensus       136 ~~~~~~--~~~~g--~~~~~~~m~k~l  158 (160)
T d2i6ca1         136 RAIAER--HDPDG--RRVALIQMDKPL  158 (160)
T ss_dssp             EEEEEE--ECTTS--CEEEEEEEEEEC
T ss_pred             EEEEEe--ecCCC--CEEEEEEEeeeC
Confidence            875543  25676  123333365554

>d1yvoa1 d.108.1.1 (A:4-172) Hypothetical protein PA4866 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PA4866
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.04  E-value=3e-10  Score=100.92  Aligned_cols=98  Identities=13%  Similarity=0.042  Sum_probs=76.1

Q ss_pred             CCCCcEEEEEEeeeccCCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcCc
Q 009150          139 DDDDVVVAAITYQIVPADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQDT  213 (542)
Q Consensus       139 ~~~~~VIg~i~~~i~~~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqGF  213 (542)
                      +.++++||.+.+....+..  ....+..++|+|++||+|+|+.|++.+++.+++.|+.++.+.+...   |..||+|+||
T Consensus        57 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~i~v~p~~rg~G~g~~l~~~~~~~a~~~g~~~l~~~v~~~N~~s~~~y~k~GF  136 (169)
T d1yvoa1          57 DAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGF  136 (169)
T ss_dssp             CTTCCEEEEEEEEESSSSGGGTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred             ecCCCEEEeeccccccccccccceEEEEeecChhhhcCCeeeeeeeeeccccccccceEEEEEeccCcHHHHHHHhcCCc
Confidence            4678999998777665332  4566777999999999999999999999999999999997777653   8889999999


Q ss_pred             cccccccccccCCCCCCCceeEEE
Q 009150          214 SADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       214 ~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +..+........ +|......+|.
T Consensus       137 ~~~g~~~~~~~~-~g~~~D~~~~~  159 (169)
T d1yvoa1         137 EISGQMPQVGQK-FGRWLDLTFMQ  159 (169)
T ss_dssp             EEEEEEEEEEEE-TTEEEEEEEEE
T ss_pred             EEEEEEeeEEEE-CCEEEEEEEEE
Confidence            999877544222 22133466666

>d2b5ga1 d.108.1.1 (A:3-169) Diamine acetyltransferase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Diamine acetyltransferase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=2.7e-10  Score=100.01  Aligned_cols=81  Identities=14%  Similarity=0.100  Sum_probs=69.4

Q ss_pred             CCCCcEEEEEEeeecc--CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCc
Q 009150          139 DDDDVVVAAITYQIVP--ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDT  213 (542)
Q Consensus       139 ~~~~~VIg~i~~~i~~--~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF  213 (542)
                      ..++.+||.+.+...+  ......+|..+.|++++||+|||++||.++++++++.|+..|.+.+..   .|..||+|+||
T Consensus        64 ~~~~~ivG~~~~~~~~~~~~~~~~~i~~l~v~~~~rg~Gig~~L~~~l~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~GF  143 (167)
T d2b5ga1          64 PEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGA  143 (167)
T ss_dssp             TTCCCEEEEEEEEEEEETTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTCHHHHHHHHTTTC
T ss_pred             eeCCeEEEEEEEEeecccccccceecceeeeeeccccCCCchhhhhhhhhhhcccCcceeeeecccCcHHHHHHHHHCCC
Confidence            3677899988776655  334678899999999999999999999999999999999999876665   39999999999


Q ss_pred             cccccc
Q 009150          214 SADTAV  219 (542)
Q Consensus       214 ~~~~~~  219 (542)
                      +.+.+.
T Consensus       144 ~~~~~~  149 (167)
T d2b5ga1         144 SDLSSE  149 (167)
T ss_dssp             EEHHHH
T ss_pred             EECcEe
Confidence            988753

>d2ae6a1 d.108.1.1 (A:1-161) Putative acetyltransferase EF0244 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase EF0244
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.99  E-value=3.7e-10  Score=98.98  Aligned_cols=97  Identities=13%  Similarity=0.094  Sum_probs=75.2

Q ss_pred             CCCcEEEEEEeeeccC--CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~--d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      .+|++||.+.+.....  .....+|..++|+|++||+|||+.|+..+++.++..|++++.+.+..   .|..||+|.||+
T Consensus        57 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~~v~~~~rg~Gig~~ll~~l~~~~~~~g~~~i~~~~~~~N~~a~~~y~~~GF~  136 (161)
T d2ae6a1          57 SGQQLAGFIEVHPPTSLAAHQKQWLLSIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGFV  136 (161)
T ss_dssp             ETTEEEEEEEEECSSSCGGGTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCE
T ss_pred             ECCEEEEEEeecccccccccceEEEEEEEEeeccccccccccchhheeeccccccchhheehhccccHHHHHHHHHCCCE
Confidence            3689999887665442  22457799999999999999999999999999999999999776554   399999999999


Q ss_pred             ccccccccccCCCCCCCceeEEE
Q 009150          215 ADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       215 ~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      ..+..... .|.+|-+....+|.
T Consensus       137 ~~g~~~~~-~~~~g~~~D~~~~~  158 (161)
T d2ae6a1         137 QEAHFKEE-FYINGHYCDDYQYA  158 (161)
T ss_dssp             EEEEEEEE-EEETTEEEEEEEEE
T ss_pred             EEEEEeee-EEECCEEEEEEEEE
Confidence            98877443 34555333444444

>d2beia1 d.108.1.1 (A:3-169) Diamine acetyltransferase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Diamine acetyltransferase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.3e-09  Score=94.67  Aligned_cols=80  Identities=11%  Similarity=0.020  Sum_probs=65.9

Q ss_pred             CCCcEEEEEEeeecc--CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVP--ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~--~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~  214 (542)
                      ..+.++|.+.+...+  ......+|..++|.+++||+|||+.|++++.+++++.|+.+|.+.+..   .|..||+|+||+
T Consensus        65 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~v~~~~rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~  144 (167)
T d2beia1          65 LGPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKALGAQ  144 (167)
T ss_dssp             -CCEEEEEEEEEEEEETTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCE
T ss_pred             ecceeeeEEEeecccccccccceeccceecCHhhcCCCcchhhHHHHHHHHhhhcccccceeeccCCHHHHHHHHHCCCE
Confidence            355677765544443  344788899999999999999999999999999999999999877654   499999999999


Q ss_pred             ccccc
Q 009150          215 ADTAV  219 (542)
Q Consensus       215 ~~~~~  219 (542)
                      .+++.
T Consensus       145 ~~~~~  149 (167)
T d2beia1         145 DLTEA  149 (167)
T ss_dssp             EHHHH
T ss_pred             EccEe
Confidence            88764

>d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein SA2309
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.89  E-value=1.3e-09  Score=92.38  Aligned_cols=69  Identities=22%  Similarity=0.320  Sum_probs=61.9

Q ss_pred             CCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhc
Q 009150          139 DDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQ  211 (542)
Q Consensus       139 ~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~Kq  211 (542)
                      .++|++||++.|....+  ..++|.+++|+|++||+|||++||.++++++++.|++-+.++.+  +..||.|+
T Consensus        17 ~~~g~~vg~~~~~~~~~--~~~~i~~~~V~p~~RG~Gig~~Lv~~~l~~Ar~~g~kvvp~c~y--~~~~~~k~   85 (102)
T d1r57a_          17 DDENNALAEITYRFVDN--NEINIDHTGVSDELGGQGVGKKLLKAVVEHARENNLKIIASCSF--AKHMLEKE   85 (102)
T ss_dssp             SSSTTEEEEEEEEESSS--SEEEEEEEEECCSSSTTCTHHHHHHHHHHHHHHHTCEEEESSHH--HHHHHHHC
T ss_pred             EeCCceEEEEEEEEcCC--CEEEEEEEEEChHHCCccHHHHHHHHHHHHHHHCCCEEEEecHh--HHHHHHhC
Confidence            36889999998876543  48999999999999999999999999999999999998888887  88999985

>d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Mycothiol synthase MshD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.84  E-value=4.6e-09  Score=100.20  Aligned_cols=80  Identities=11%  Similarity=0.107  Sum_probs=66.5

Q ss_pred             CCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc----------CCcEEEEEccc---cch
Q 009150          139 DDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV----------GIRTIFCWGDK---ESE  205 (542)
Q Consensus       139 ~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~----------GI~~I~l~a~~---~A~  205 (542)
                      ..+|+|||.+.+...+.+...++|+.++|+|++||+|||+.|+.+++++|++.          |+..|.|+++.   .|.
T Consensus       210 ~~~g~vvG~~~~~~~~~~~~~~~i~~~~V~p~~RGrGlG~~Ll~~~~~~~~~~g~~~~~~~~~g~~~i~L~V~~~N~~A~  289 (308)
T d1p0ha_         210 ERPGRLLGFHWTKVHPDHPGLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAAV  289 (308)
T ss_dssp             ---CCEEEEEEEECCTTSTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHC---------CCCEEEEEEETTCHHHH
T ss_pred             ccCCeEEEEEEEEEcCCCCcEEEEeccEECHHHcCCCHHHHHHHHHHHHHHHhCCcceeeecCCccEEEEeccCCCHHHH
Confidence            46889999987777765567999999999999999999999999999999998          56666666654   389


Q ss_pred             hhhhhcCcccccc
Q 009150          206 GFWHKQDTSADTA  218 (542)
Q Consensus       206 ~Fw~KqGF~~~~~  218 (542)
                      .||+|+||++.+.
T Consensus       290 ~lY~~~GF~~~~~  302 (308)
T d1p0ha_         290 RTYQSLGFTTYSV  302 (308)
T ss_dssp             HHHHHTTCEEEEE
T ss_pred             HHHHHCCCEEece
Confidence            9999999999864

>d2ge3a1 d.108.1.1 (A:6-169) Probable acetyltransferase Atu2290 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2290
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.81  E-value=7.5e-09  Score=90.31  Aligned_cols=117  Identities=12%  Similarity=0.059  Sum_probs=81.1

Q ss_pred             ccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeecc-CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcC
Q 009150          114 KRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVP-ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG  192 (542)
Q Consensus       114 ~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~-~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~G  192 (542)
                      .+..|+.+...++ +..++..     .++++||.+.+.... .......+-.++|+|+|||+|||+.|+..+++++++.|
T Consensus        40 ~~~~~~~~~~~~~-~~~~v~~-----~~~~~vG~~~~~~~~~~~~~~~~~~~~~v~~~~rg~Gig~~l~~~~~~~a~~~~  113 (164)
T d2ge3a1          40 AVRAFVLDMIEND-HPQFVAI-----ADGDVIGWCDIRRQDRATRAHCGTLGMGILPAYRNKGLGARLMRRTLDAAHEFG  113 (164)
T ss_dssp             HHHHHHHHHHHTT-CCEEEEE-----ETTEEEEEEEEEECCSTTTTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhhcCC-ceEEEEE-----ECCEEEEEEEeeccccCCcCcEEEEEEEeChhhccccccccchhhhhheecccc
Confidence            3345666664333 3333222     367999988776554 22222223347999999999999999999999999999


Q ss_pred             CcEEEEEcccc---chhhhhhcCccccccccccccCCCCCCCceeEEE
Q 009150          193 IRTIFCWGDKE---SEGFWHKQDTSADTAVSLKFCFPVKPCEKSSLVT  237 (542)
Q Consensus       193 I~~I~l~a~~~---A~~Fw~KqGF~~~~~~~~~~~~~~~~c~ea~lm~  237 (542)
                      +.++.+.+...   |..||+|.||+..+..+.-..+.|. ...+.+|.
T Consensus       114 ~~~i~~~v~~~N~~s~~~y~k~GF~~~g~~~~~~~~~g~-~~D~~~~~  160 (164)
T d2ge3a1         114 LHRIELSVHADNARAIALYEKIGFAHEGRARDAVSIDGH-YIDSLNMA  160 (164)
T ss_dssp             CCEEEEEEETTCHHHHHHHHHHTCEEEEEEEEEEESSSC-EEEEEEEE
T ss_pred             ccccccccCcchHHHHHHHHHCCCEEEEEEecEEEECCE-EEEEEEEE
Confidence            99998776663   9999999999998877544333332 22345555

>d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Aminoglycoside 2'-N-acetyltransferase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.68  E-value=1.5e-08  Score=92.70  Aligned_cols=77  Identities=6%  Similarity=-0.043  Sum_probs=62.5

Q ss_pred             CCCcEEEEEEeeec---cCCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIV---PADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~---~~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~  214 (542)
                      +++++||.+.+...   ..+.  ..++|..+||+|+|||+|||++||+++.+.+++.+ ..+++.++..+..||+|.||+
T Consensus        54 ~~~~~v~~~~~~~~~~~~~~~~~~~~~I~~v~V~p~~Rg~Gig~~Ll~~~~~~~r~~~-~~~~l~~~~~~~~fY~~~G~~  132 (181)
T d1m4ia_          54 HHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAY-QLGALSSSARARRLYASRGWL  132 (181)
T ss_dssp             ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHC-SEEEEECCTTTHHHHHHTTCE
T ss_pred             eCCceeEEEEEEEEEEecCCcccceEEEEEEEEcHHHCCCHHHHHHHHHHHHHHHhcC-CEEEEecchhhHHHHHHcCCE
Confidence            36788887765432   2232  56899999999999999999999999999998876 555677888899999999998


Q ss_pred             ccc
Q 009150          215 ADT  217 (542)
Q Consensus       215 ~~~  217 (542)
                      ...
T Consensus       133 ~~~  135 (181)
T d1m4ia_         133 PWH  135 (181)
T ss_dssp             ECC
T ss_pred             EcC
Confidence            754

>d1yrea1 d.108.1.1 (A:11-193) Hypothetical protein PA3270 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PA3270
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.68  E-value=3.6e-08  Score=89.07  Aligned_cols=103  Identities=7%  Similarity=0.051  Sum_probs=83.5

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEccc---cchhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRL-QSVGIRTIFCWGDK---ESEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~l-k~~GI~~I~l~a~~---~A~~Fw~KqGF~~  215 (542)
                      .+|++||.+.+.-..+...-++|+.+.|+++|||+|+|+..+..+.+++ ..+|+++|.+.+..   .|..+++|+||+.
T Consensus        65 ~~g~~iG~i~l~~~~~~~~~~eiG~~~l~~~~~g~G~~~ea~~~l~~~af~~lg~~~i~~~v~~~N~aS~~~~~k~Gf~~  144 (183)
T d1yrea1          65 LGVQLVGTTRFAEFLPALPACEIGWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQR  144 (183)
T ss_dssp             ETTEEEEEEEEEEEETTTTEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEE
T ss_pred             ECCEEEEEEEeeeccccCCeEEEEEEEecHHHcCCccchhHHHHHhhhhhhccCcceEEeecccCCHHHHhhHhccCeEE
Confidence            4789999998875545667899999999999999999999999999998 67899999666555   3999999999999


Q ss_pred             cccccccccCCCCCCCceeEEE-Eeccc
Q 009150          216 DTAVSLKFCFPVKPCEKSSLVT-VNRSL  242 (542)
Q Consensus       216 ~~~~~~~~~~~~~~c~ea~lm~-l~~~~  242 (542)
                      .+.+++...+++|.-....+|. +..+-
T Consensus       145 eg~~r~~~~~~~G~~~D~~~y~l~~~dw  172 (183)
T d1yrea1         145 EGVLRNHRRLAGGRLDDTFVYSITDHEW  172 (183)
T ss_dssp             EEEEEEEEECTTSCEEEEEEEEEETTTH
T ss_pred             EEEeecceEcCCCcEEEEEEEEeEHHHH
Confidence            9988887788776444455555 55543

>d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein MW0638
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.67  E-value=1.4e-08  Score=85.34  Aligned_cols=56  Identities=16%  Similarity=0.288  Sum_probs=50.2

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEE
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTI  196 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I  196 (542)
                      .+|+|||.+.+.+.. +..+++|..++|+|+|||+|||+.||+++++++++.|+..|
T Consensus        60 ~~~~ivG~~~~~~~~-~~~~~~i~~l~V~~~~RgkGiG~~Ll~~~~~~a~~~g~~~i  115 (118)
T d2aj6a1          60 NEGQLIAFIWGHFSN-EKSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRI  115 (118)
T ss_dssp             ETTEEEEEEEEEEET-TTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCC
T ss_pred             ECCEEEEEeeecccc-CCCeEEEEEEEEchhhccCHHHHHHHHHHHHHHHHhCCCEE
Confidence            578999998776654 55789999999999999999999999999999999999875

>d1nsla_ d.108.1.1 (A:) Probable acetyltransferase YdaF {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase YdaF
species: Bacillus subtilis [TaxId: 1423]

Probab=98.66  E-value=3.2e-08  Score=88.43  Aligned_cols=97  Identities=8%  Similarity=0.029  Sum_probs=76.0

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEcccc---chhhhhhcCcccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRL-QSVGIRTIFCWGDKE---SEGFWHKQDTSAD  216 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~l-k~~GI~~I~l~a~~~---A~~Fw~KqGF~~~  216 (542)
                      ++++||.+.+.-...+..-++|. +.|++++||+|||+.++..+.+++ ...|+++|.+.++..   |..+++|+||+..
T Consensus        76 ~~~~iG~~~~~~~~~~~~~~eig-~~i~~~~~g~G~~~e~~~~~~~~af~~~~~~~i~~~v~~~N~~s~~~~~k~GF~~e  154 (180)
T d1nsla_          76 DGSLCGMISLHNLDQVNRKAEIG-YWIAKEFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERIGFLEE  154 (180)
T ss_dssp             TTEEEEEEEEEEEETTTTEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEE
T ss_pred             CCcEEEEEEeeecccCCCeEEEE-EeecccccccccchhhhhhhhhccccccCcceeecccccccHHHHHHHHHCCCEEE
Confidence            57899998776554555788897 679999999999999999999988 677999997766663   9999999999999


Q ss_pred             ccccccccCCCCCCCceeEEE-Ee
Q 009150          217 TAVSLKFCFPVKPCEKSSLVT-VN  239 (542)
Q Consensus       217 ~~~~~~~~~~~~~c~ea~lm~-l~  239 (542)
                      +..+....+.|. .....+|. |.
T Consensus       155 g~~r~~~~~~g~-~~d~~~~~l~~  177 (180)
T d1nsla_         155 GKARDGLYVNGM-HHDLVYYSLLK  177 (180)
T ss_dssp             EEEEEEEEETTE-EEEEEEEEEEG
T ss_pred             EEEeeEEEECCE-EEEEEEEEEEH
Confidence            887665444543 33344444 43

>d1s7ka1 d.108.1.1 (A:3-176) L7/L12-Ribosomal-protein-serine acetyltransferase RimL {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: L7/L12-Ribosomal-protein-serine acetyltransferase RimL
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.64  E-value=2.3e-08  Score=89.19  Aligned_cols=83  Identities=8%  Similarity=0.085  Sum_probs=68.5

Q ss_pred             CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150          141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRL-QSVGIRTIFCWGDK---ESEGFWHKQDTSAD  216 (542)
Q Consensus       141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~l-k~~GI~~I~l~a~~---~A~~Fw~KqGF~~~  216 (542)
                      ++++||.+.+....+...-+||.. .|+++|||+|||+.++..+.+++ ...|++++.+.+..   .|..+++|+||+..
T Consensus        73 ~~~~iG~~~~~~~~~~~~~~eig~-~i~~~~~gkG~~~ea~~~l~~~~f~~~~~~~l~a~~~~~N~~S~~~~~k~Gf~~e  151 (174)
T d1s7ka1          73 QNEMAGVLSFNAIEPINKAAYIGY-WLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLE  151 (174)
T ss_dssp             TTEEEEEEEEEEEETTTTEEEEEE-EECGGGCSSSHHHHHHHHHHHHHHHHCSCCEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred             cCCceEEEeeccccCCCCeEEEEE-EEeehhccchhHHHHHHHHHhhhhhhcCcccceeecccCcHHHHHHHHHCCCEEE
Confidence            578999998876555556788865 68999999999999999999999 55799999766654   49999999999999


Q ss_pred             cccccccc
Q 009150          217 TAVSLKFC  224 (542)
Q Consensus       217 ~~~~~~~~  224 (542)
                      +..++.-.
T Consensus       152 G~~~~~~~  159 (174)
T d1s7ka1         152 GCMKQAEY  159 (174)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEeEEE
Confidence            88755533

>d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: EF1021-like
domain: Hypothetical protein EF1021
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.63  E-value=2.8e-08  Score=95.95  Aligned_cols=78  Identities=12%  Similarity=0.048  Sum_probs=66.5

Q ss_pred             CCCcEEEEEEeeecc---CCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~  214 (542)
                      ++|+|||.+.+....   .+.  ..++|..+||+|+|||+|+|+.||+++++.+++.|+..+++++.  +..||+|.||.
T Consensus        50 ~~~~lvg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~rg~G~~~~l~~~~~~~~~~~g~~~~~l~~~--~~~~Y~~~Gf~  127 (285)
T d2hv2a2          50 IDEQLTSQVMATPFQVNFHGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLADLAKQKVALSYLAPF--SYPFYRQYGYE  127 (285)
T ss_dssp             ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCSSCHHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHTTTCE
T ss_pred             ECCEEEEEEEEEEeEEEECCeeeeEEEEEEEEECHHHcCCChHHHHHHHHHHHHHHhCCceeeeecc--chhhHhcCCcE
Confidence            578999988665432   333  34889999999999999999999999999999999999999876  78999999999


Q ss_pred             ccccc
Q 009150          215 ADTAV  219 (542)
Q Consensus       215 ~~~~~  219 (542)
                      ...+.
T Consensus       128 ~~~~~  132 (285)
T d2hv2a2         128 QTFEQ  132 (285)
T ss_dssp             ECCEE
T ss_pred             Eeeee
Confidence            87654

>d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: Hypothetical protein cg14615-pa
domain: Hypothetical protein cg14615-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.59  E-value=2e-08  Score=99.22  Aligned_cols=113  Identities=16%  Similarity=0.183  Sum_probs=81.8

Q ss_pred             hhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeecc
Q 009150           90 SYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSS  169 (542)
Q Consensus        90 ~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~  169 (542)
                      ....||..|..    .-++. +.|- ..||.|++  ...-++.++.   +++|++||.+...      ++++|..++|.|
T Consensus       173 l~~~da~~i~~----~W~~~-~~~s-~~~i~~~i--~~~~~~gl~~---~e~G~lv~w~~~~------~~g~l~~l~V~p  235 (297)
T d1sqha_         173 LRAEDAAMVHD----SWPNK-GEGS-LTYLQALV--RFNKSLGICR---SDTGELIAWIFQN------DFSGLGMLQVLP  235 (297)
T ss_dssp             CCGGGHHHHHH----TCTTC-SSSC-HHHHHHHH--HHSCEEEEEE---TTTCCEEEEEEEC------TTSSEEEEEECG
T ss_pred             CCHHHHHHHHH----hcCCC-Ccch-HHHHHHHH--hhCCeEEEEE---CCCCCEEEEEEEC------CCEEEEEEEECh
Confidence            33455666665    33321 1221 35788874  2333454443   3678999977431      368899999999


Q ss_pred             CccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcCccccccc
Q 009150          170 IYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQDTSADTAV  219 (542)
Q Consensus       170 ~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqGF~~~~~~  219 (542)
                      +|||+|+|+.|+.++.+++++.|+..+++.+..+   |..||+|+||+.++..
T Consensus       236 ~~r~~G~g~~l~~~~~~~~~~~g~~~v~~~v~~~N~~s~~ly~klGF~~~~~~  288 (297)
T d1sqha_         236 KAERRGLGGLLAAAMSREIARGEEITLTAWIVATNWRSEALLKRIGYQKDLVN  288 (297)
T ss_dssp             GGCSSSHHHHHHHHHHHHHHHHSCSCEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred             HhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCcHHHHHHHHHCCCEEeeEE
Confidence            9999999999999999999999998887665543   8999999999988765

>d2fcka1 d.108.1.1 (A:1-178) Putative ribosomal-protein-serine acetyltransferase VC1889 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative ribosomal-protein-serine acetyltransferase VC1889
species: Vibrio cholerae [TaxId: 666]

Probab=98.57  E-value=1.6e-08  Score=90.79  Aligned_cols=85  Identities=13%  Similarity=0.151  Sum_probs=70.9

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEcccc---chhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRL-QSVGIRTIFCWGDKE---SEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~l-k~~GI~~I~l~a~~~---A~~Fw~KqGF~~  215 (542)
                      +++++||.+.+....++...+||. +.|++++||+|+|+.++..+.+++ ...|+++|...+..+   |...++|+||+.
T Consensus        76 ~~~~~iG~~~l~~~~~~~~~~eig-~~i~~~~~g~G~~~e~l~~l~~~af~~~~~~~i~~~~~~~N~~s~~l~ek~GF~~  154 (178)
T d2fcka1          76 QTQTLVGMVAINEFYHTFNMASLG-YWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANR  154 (178)
T ss_dssp             TTCCEEEEEEEEEEEGGGTEEEEE-EEECHHHHTTTHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEE
T ss_pred             cCCceEEEEeecccccCCCeEEEE-EeeecccccchhhhhhhheeeeeeccccCcceeeEecCCCcHHHHHHHHHCCCEE
Confidence            578999999887655456788997 689999999999999999999999 556999997776663   999999999999


Q ss_pred             cccccccccC
Q 009150          216 DTAVSLKFCF  225 (542)
Q Consensus       216 ~~~~~~~~~~  225 (542)
                      .+..+....+
T Consensus       155 eg~~~~~~~~  164 (178)
T d2fcka1         155 EQLAPNRFLY  164 (178)
T ss_dssp             EEEEEEEEEE
T ss_pred             EEEEeeEEEE
Confidence            9877554333

>d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: EF1021-like
domain: Putative acetyltransferase EF2353
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.55  E-value=6.5e-08  Score=93.27  Aligned_cols=78  Identities=6%  Similarity=0.081  Sum_probs=66.8

Q ss_pred             CCCcEEEEEEeeecc---CCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~  214 (542)
                      ++|+|||++.+..+.   .+.  ..++|..+||+|+|||+|||++||.++++.+++.|+.-+++++.  +..||+|.||.
T Consensus        58 ~~~~lvg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~r~~G~~~~L~~~~~~~~~~~~~~~~~l~~~--~~~~Y~~~Gf~  135 (291)
T d2i00a2          58 HENQLISQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLFPY--NIPYYRRKGWE  135 (291)
T ss_dssp             ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHHTTCE
T ss_pred             ECCEEEEEEEEEEeEEEECCeeeeEEEEEEEEEchhhcCCChHHHHHHHHHHHHHhcCCcEEEeecc--chhhHhcCCCE
Confidence            478999998776443   333  45889999999999999999999999999999999998888876  78999999998


Q ss_pred             ccccc
Q 009150          215 ADTAV  219 (542)
Q Consensus       215 ~~~~~  219 (542)
                      ...+.
T Consensus       136 ~~~~~  140 (291)
T d2i00a2         136 IMSDK  140 (291)
T ss_dssp             EEEEE
T ss_pred             EeccE
Confidence            87654

>d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: EF1021-like
domain: Putative acetyltransferase Ava4977
species: Anabaena variabilis [TaxId: 1172]

Probab=98.53  E-value=5.3e-08  Score=93.97  Aligned_cols=78  Identities=9%  Similarity=0.155  Sum_probs=65.9

Q ss_pred             CCCcEEEEEEeeecc---CCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcc
Q 009150          140 DDDVVVAAITYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTS  214 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~  214 (542)
                      ++++|||++.+....   .+.  ..+.|..+||+|+|||+|||++|++++++.+++.|+.-.++++.  +.+||+|.||+
T Consensus        47 ~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~rg~G~~~~L~~~~~~~~~~~g~~~~~l~~~--~~~~Y~~~Gf~  124 (283)
T d2ozga2          47 REQKVAGGLAILPMGQWWGGQRVPMAGIAAVGIAPEYRGDGAAIALIQHTLQEISEQDIPISVLYPA--TQRLYRKAGYE  124 (283)
T ss_dssp             ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHHTTCE
T ss_pred             ECCEEEEEEEEEEeeeeECCeeeeEeeEEEEEECcccccCChHHHHHHHHHHHHHhcCceEEEccCC--ccchHHcCCCe
Confidence            478999998776653   222  35789999999999999999999999999999999987777765  78999999998


Q ss_pred             ccccc
Q 009150          215 ADTAV  219 (542)
Q Consensus       215 ~~~~~  219 (542)
                      .....
T Consensus       125 ~~~~~  129 (283)
T d2ozga2         125 QAGSS  129 (283)
T ss_dssp             EEEEE
T ss_pred             EeceE
Confidence            87654

>d1in1a_ c.15.1.2 (A:) DNA ligase III alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA ligase
domain: DNA ligase III alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=5.4e-08  Score=80.59  Aligned_cols=69  Identities=23%  Similarity=0.360  Sum_probs=56.2

Q ss_pred             CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC--CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCC
Q 009150          396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG--STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFV  473 (542)
Q Consensus       396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~--~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~L  473 (542)
                      =.+++|.+++..++  +..|..+|..+||.+..+.  +.+||||+.+...         ....||+|+||.||.+++++|
T Consensus        17 F~G~~~~i~~~~p~--~~~L~r~i~a~GG~~~~~~~~~~vTHvI~~~~~~---------~~~~iV~p~Wi~dci~~~~lL   85 (88)
T d1in1a_          17 FTGVRLYLPPSTPD--FSRLRRYFVAFDGDLVQEFDMTSATHVLGSRDKN---------PAAQQVSPEWIWACIRKRRLV   85 (88)
T ss_dssp             STTCBCCCCTTSTT--HHHHHHHHHHHTCBCCCTTCCTTCCCEESCCTTC---------TTSCEECHHHHHHHHHHTSCC
T ss_pred             hCCeEEEECCCCCC--HHHHHHHHHHhCCEEeeeccCCCceEEEEcCCCC---------CCcEEEehHHHHHHHHcCCcC
Confidence            35678888886653  4679999999999998765  5799999987542         245799999999999999999


Q ss_pred             CC
Q 009150          474 DE  475 (542)
Q Consensus       474 dE  475 (542)
                      ++
T Consensus        86 Pp   87 (88)
T d1in1a_          86 AP   87 (88)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>d1l7ba_ c.15.1.2 (A:) NAD+-dependent DNA ligase, domain 4 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA ligase
domain: NAD+-dependent DNA ligase, domain 4
species: Thermus thermophilus [TaxId: 274]

Probab=98.30  E-value=4.5e-07  Score=75.50  Aligned_cols=82  Identities=12%  Similarity=0.095  Sum_probs=68.1

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCC
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFV  473 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~L  473 (542)
                      +..+.+|+|||..+. .|.+++++|+++||.|.+.+ ..+||||++... +-|+-.|...|++||+.+|+.+.+++..--
T Consensus         7 ~l~G~~iv~TG~~~~-~R~e~~~~i~~~Gg~v~~sVs~~t~~LV~g~~~-g~K~~kA~~~gI~IisE~~f~~~l~~~~~~   84 (92)
T d1l7ba_           7 ALKGLTFVITGELSR-PREEVKALLRRLGAKVTDSVSRKTSYLVVGENP-GSKLEKARALGVPTLTEEELYRLLEARTGK   84 (92)
T ss_dssp             SSTTCEEECSTTTTS-CHHHHHHHHHHTTCEEESCCSSSCCCBEECSSS-STTHHHHHCSSSCCEEHHHHHHHHHHHHCS
T ss_pred             CcCCCEEEEeCCccC-CHHHHHHHHHHhCCEEcCccccceeEEEECCCC-CcHHHHHHHcCCcEecHHHHHHHHHhCCCC
Confidence            456789999998864 58899999999999999998 789999998643 469999999999999999999999864433


Q ss_pred             CCCCc
Q 009150          474 DESSY  478 (542)
Q Consensus       474 dEe~Y  478 (542)
                      +.+++
T Consensus        85 ~~~e~   89 (92)
T d1l7ba_          85 KAEEL   89 (92)
T ss_dssp             CSSSC
T ss_pred             CHHHH
Confidence            33443

>d1yk3a1 d.108.1.1 (A:10-207) Hypothetical protein Rv1347c/MT1389 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein Rv1347c/MT1389
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.00  E-value=3.4e-06  Score=76.70  Aligned_cols=113  Identities=12%  Similarity=-0.006  Sum_probs=79.1

Q ss_pred             ccceeeeecccceeEEEeeecccCCCCcEEEEEEeeec---------cCCCceeEeeeeeeccCccccChHHHHHHHHHH
Q 009150          116 SMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIV---------PADTQYAEVPLAAVSSIYQHKGVGRLLYLELRK  186 (542)
Q Consensus       116 ~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~---------~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~  186 (542)
                      .+|+.+.+.+..+...+...     ++..+|.+.+...         +....-+.|..+.+++++||+|||+.++..+++
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GkG~gt~~l~~li~  144 (198)
T d1yk3a1          70 RQHLNAQLEGTYSLPLIGSW-----HGTDGGYLELYWAAKDLISHYYDADPYDLGLHAAIADLSKVNRGFGPLLLPRIVA  144 (198)
T ss_dssp             HHHHHHHHTSSSEEEEEEEE-----TTEEEEEEEEEEGGGBGGGGSSCCCTTCEEEEEEESCHHHHTTTHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCccceEEEEE-----CCEEEEEEEEEeccccccccccccCCCceEEEEEEEChhhcCCcHHHHHHHHHHH
Confidence            45666664555444443332     5788887654322         112223458889999999999999999999999


Q ss_pred             HHH--HcCCcEEEEEccc---cchhhhhhcCccccccccccccCCCCCCCceeEEEEec
Q 009150          187 RLQ--SVGIRTIFCWGDK---ESEGFWHKQDTSADTAVSLKFCFPVKPCEKSSLVTVNR  240 (542)
Q Consensus       187 ~lk--~~GI~~I~l~a~~---~A~~Fw~KqGF~~~~~~~~~~~~~~~~c~ea~lm~l~~  240 (542)
                      ++-  ..|+.+|.+....   .|..+|+|.||+..++.    -+|+.   .++||.|..
T Consensus       145 ~~f~~~~~~~ri~~~v~~~N~~s~rl~erlGF~~~ge~----d~~~~---~~~l~~~~r  196 (198)
T d1yk3a1         145 SVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGEH----DTTNR---RMALYALEA  196 (198)
T ss_dssp             HHHHHCTTCCEEEECCBTTCHHHHHHHHHHTCEEEEEE----ECSSC---EEEEEEEEC
T ss_pred             HHHhhcCCccEEEEEeCCCCHHHHHHHHHcCCEEEeEE----ecCCC---cEEEEEEeC
Confidence            874  5699999887766   39999999999999976    23553   345555543

>d2fsra1 d.108.1.1 (A:4-167) Probable acetyltranferase Atu2435 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltranferase Atu2435
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.48  E-value=0.00018  Score=61.19  Aligned_cols=79  Identities=11%  Similarity=0.075  Sum_probs=63.9

Q ss_pred             CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHH-HcCCcEEEEEcccc---chhhhhhcCccc
Q 009150          140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQ-SVGIRTIFCWGDKE---SEGFWHKQDTSA  215 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk-~~GI~~I~l~a~~~---A~~Fw~KqGF~~  215 (542)
                      +++.+||.+.+...+ ....+++. +.+.+.++++|+|+.++..++.++. ..|+.+|.+.+...   |...++|+||+.
T Consensus        69 ~~~~~ig~~~~~~~~-~~~~~~~g-~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~v~~~v~~~N~~S~rl~ek~GF~~  146 (164)
T d2fsra1          69 ETGECIGQIGINHGP-LFPEKELG-WLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAVAERIGGTL  146 (164)
T ss_dssp             TTTEEEEEEEEECST-TCSSCEEE-EEECTTCTTSSHHHHHHHHHHHHHHHHSCCSCEEEEECTTCHHHHHHHHHTTCEE
T ss_pred             CCCeEEEEEEeeccC-ccccceEe-eEeeeeeccccccccceeEEEeeccccccceeEEEEECcCCHHHHHHHHHCCCEE
Confidence            577899998887665 33455444 6899999999999999999998775 67999998777663   999999999999


Q ss_pred             ccccc
Q 009150          216 DTAVS  220 (542)
Q Consensus       216 ~~~~~  220 (542)
                      .+...
T Consensus       147 eg~~~  151 (164)
T d2fsra1         147 DPLAP  151 (164)
T ss_dssp             CTTSC
T ss_pred             eeeEc
Confidence            87653

>d1ro5a_ d.108.1.3 (A:) Autoinducer synthesis protein LasI {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: Autoinducer synthetase
domain: Autoinducer synthesis protein LasI
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.27  E-value=0.00054  Score=62.66  Aligned_cols=77  Identities=13%  Similarity=0.015  Sum_probs=64.7

Q ss_pred             CCCcEEEEEEeeec-------------------cCCCceeEeeeeeeccCccccC----hHHHHHHHHHHHHHHcCCcEE
Q 009150          140 DDDVVVAAITYQIV-------------------PADTQYAEVPLAAVSSIYQHKG----VGRLLYLELRKRLQSVGIRTI  196 (542)
Q Consensus       140 ~~~~VIg~i~~~i~-------------------~~d~~~aeI~~~AV~~~~QgkG----iG~~Lv~~l~~~lk~~GI~~I  196 (542)
                      .+|++||++=+...                   |.+..+.||.-|||++++++++    ++..|+..+.+++...|+.++
T Consensus        61 ~~g~~vG~~Rl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~E~sR~aV~~~~r~~~r~~~~~~~L~~~~~~~a~~~G~~~~  140 (197)
T d1ro5a_          61 EDGQVFGCWRILDTTGPYMLKNTFPELLHGKEAPCSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQTL  140 (197)
T ss_dssp             ETTEEEEEEEEEETTSCCHHHHTCGGGGTTCCCCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHHHHHHTTTCCEE
T ss_pred             cccceEEEEEeecCCCCCcccccchhhhcCccccCCCceEEEEEEEEccccccccchhHHHHHHHHHHHHHHHHCCCCEE
Confidence            36789999865421                   2344688999999999996555    788999999999999999999


Q ss_pred             EEEccccchhhhhhcCcccc
Q 009150          197 FCWGDKESEGFWHKQDTSAD  216 (542)
Q Consensus       197 ~l~a~~~A~~Fw~KqGF~~~  216 (542)
                      ++.+......||++.||...
T Consensus       141 ~~~~~~~~~r~~~r~G~~~~  160 (197)
T d1ro5a_         141 VTVTTVGVEKMMIRAGLDVS  160 (197)
T ss_dssp             EEEEEHHHHHHHHHTTCEEE
T ss_pred             EEEecHHHHHHHHHCCCcEE
Confidence            99999999999999999664

>d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Mycothiol synthase MshD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.19  E-value=0.00012  Score=68.95  Aligned_cols=78  Identities=4%  Similarity=-0.081  Sum_probs=58.2

Q ss_pred             CCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccccc
Q 009150          139 DDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTA  218 (542)
Q Consensus       139 ~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~  218 (542)
                      .++|+|||.+.+...  +..-.++..++|+|++||+|||+.|+.++.++++..+...+. .....+..|+.+.||.....
T Consensus        54 ~~~g~~vG~~~~~~~--~~~~~~~~~~~V~P~~R~~GiG~~Ll~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~  130 (308)
T d1p0ha_          54 RPGGPIIGYLNLSPP--RGAGGAMAELVVHPQSRRRGIGTAMARAALAKTAGRNQFWAH-GTLDPARATASALGLVGVRE  130 (308)
T ss_dssp             STTCCEEEEEEEECC-----CCCEEEEEECGGGCSSSHHHHHHHHHHHHTTTCCEEEEG-GGCHHHHHHHHHTTCEEEEE
T ss_pred             ecCCEEEEEEEEEec--CCCceeEEEEEECHHHhcCCHHHHHHHHHHHHHhhhccceec-ccchhhHHHHHhcccccccc
Confidence            367899998755433  333567889999999999999999999999998877655542 12225889999999987765


Q ss_pred             c
Q 009150          219 V  219 (542)
Q Consensus       219 ~  219 (542)
                      .
T Consensus       131 ~  131 (308)
T d1p0ha_         131 L  131 (308)
T ss_dssp             E
T ss_pred             c
Confidence            4

>d1xmta_ d.108.1.1 (A:) Hypothetical protein AT1g77540 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein AT1g77540
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.10  E-value=0.00033  Score=57.97  Aligned_cols=63  Identities=17%  Similarity=0.169  Sum_probs=48.6

Q ss_pred             EEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchh-hhhhc
Q 009150          146 AAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEG-FWHKQ  211 (542)
Q Consensus       146 g~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~-Fw~Kq  211 (542)
                      |.+.|.....+ +...|.|..|++++||||||+.|+..+++++++.|++-+-++.+  ... |.+|+
T Consensus        20 a~~~y~~~~~~-~~i~i~HT~V~~~~rGqGia~~Lv~~al~~ar~~g~kV~P~Cpy--v~~~~~~kh   83 (95)
T d1xmta_          20 AFIEYKMRNNG-KVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSISIIPSCSY--VSDTFLPRN   83 (95)
T ss_dssp             SEEEEEEETTT-TEEEEEEEECCGGGTTSCHHHHHHHHHHHHHHHTTCEEEECSHH--HHHTHHHHC
T ss_pred             EEEEEEEeCCC-cEEEEEEEEeCcccCCChHHHHHHHHHHHHHHHCCCEEEEeCHH--HHHHHHHhC
Confidence            44555444433 34459999999999999999999999999999999977777776  433 55554

>d1kzyc2 c.15.1.4 (C:1867-1972) 53BP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: 53BP1
domain: 53BP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.0028  Score=53.47  Aligned_cols=84  Identities=13%  Similarity=0.073  Sum_probs=63.9

Q ss_pred             CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEecc---------C--CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHH
Q 009150          395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSD---------G--STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWL  463 (542)
Q Consensus       395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d---------~--~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL  463 (542)
                      +-+.++|++.+-.+..-++.-..+++..|++++..         .  ..++.+|++...+..-..+|-+.|++|||++|+
T Consensus         2 pF~~l~vl~vs~~~~~F~e~Ws~IL~~~Ga~vV~~~~~~~~~sd~~~~~~DVvvTD~scp~~vl~~a~~~~ipvVS~EWV   81 (106)
T d1kzyc2           2 PFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQLPVVSQEWV   81 (106)
T ss_dssp             TTTTCEEEEEESCTTTTHHHHHHHHHHTTCSEEEEEESSSSCCCSCGGGCSEEEECTTCCHHHHHHHHHHTCCEECHHHH
T ss_pred             CCcceEEEEEecccccHHHHHHHHHHhCCceEeeccccchhhccCccccccEEEeCCCCCHHHHHHHHHcCCcEeeHHHH
Confidence            34567888855433322455678888888877542         1  468999999877777778888899999999999


Q ss_pred             HHHHHcCCCCCCCCc
Q 009150          464 KESFREGRFVDESSY  478 (542)
Q Consensus       464 ~dSlk~Gk~LdEe~Y  478 (542)
                      ..|+=.|+.++.+.+
T Consensus        82 IQsLI~G~~~~~dsH   96 (106)
T d1kzyc2          82 IQCLIVGERIGFKQH   96 (106)
T ss_dssp             HHHHHHTSCCCTTSS
T ss_pred             HHHHHccCcCCCCCC
Confidence            999999999987644

>d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: BRCT domain
domain: Breast cancer associated protein, BRCA1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=0.00072  Score=54.20  Aligned_cols=36  Identities=22%  Similarity=0.357  Sum_probs=31.3

Q ss_pred             CCCCCeEEEEeCC-CCCCHHHHHHHHHhCCCEEeccC
Q 009150          506 GLLRGYNIIMAAH-IQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       506 ~LF~G~~f~Is~~-v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      +||+|+.||+++. ..+++++|+++|+.+||+++.++
T Consensus         2 kiF~g~~i~~~g~~~~~~~~~L~~li~~~GG~v~~~~   38 (102)
T d1t15a2           2 KIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKEL   38 (102)
T ss_dssp             CTTTTCEEEECSCCSSSCHHHHHHHHHHTTCEECCSG
T ss_pred             CCCCCcEEEEeCCCCCcCHHHHHHHHHHhCCEEeecc
Confidence            6999999999874 55679999999999999997653

>d1iica1 d.108.1.2 (A:34-218) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-myristoyl transferase, NMT
domain: N-myristoyl transferase, NMT
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.99  E-value=0.0084  Score=55.03  Aligned_cols=60  Identities=18%  Similarity=0.264  Sum_probs=51.0

Q ss_pred             CCCcEEEEEEeeecc---CCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCC-cEEEEE
Q 009150          140 DDDVVVAAITYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGI-RTIFCW  199 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~---~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI-~~I~l~  199 (542)
                      +++++||.|+.+..-   .+.  ..+||-|+||+.++|.+||+..|++|+..++...|| ..|++-
T Consensus       108 ~~~KLvg~Is~~P~~i~i~~~~~~~~~VnFLCVhkk~R~K~lAPvLI~EitRr~n~~~i~qavyt~  173 (185)
T d1iica1         108 ETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTA  173 (185)
T ss_dssp             TTCCEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred             cCCcEEEEEeeeEEEEEEcCeEEEEEEEEEEEEchhHhhcCCcHHHHHHHHHHhcccCeEEEEEec
Confidence            467899999988775   222  789999999999999999999999999999999998 444543

>d1rxta1 d.108.1.2 (A:78-218) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-myristoyl transferase, NMT
domain: N-myristoyl transferase, NMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.61  E-value=0.0061  Score=53.77  Aligned_cols=57  Identities=19%  Similarity=0.248  Sum_probs=49.8

Q ss_pred             CCCcEEEEEEeeecc-----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEE
Q 009150          140 DDDVVVAAITYQIVP-----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTI  196 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I  196 (542)
                      +++++||.|+++..-     .....+||-|+||+.++|.+|++..|++|+..++...||-..
T Consensus        64 ~~~kLVgfIs~~P~~i~i~~~~~~~~~InFLCVhKklR~k~lAPvLI~EitRr~n~~gI~qa  125 (141)
T d1rxta1          64 SSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQA  125 (141)
T ss_dssp             SSSCEEEEECCEECCCCCSSSCCCCEECCCCEECSSCCCSSSHHHHHHHHHHHHTTTTCCCE
T ss_pred             cCCeEEEEEeceEEEEEEeCCEeEEEEEEEEEEchhHhhcCCcHHHHHHHHHHhhccCeEEE
Confidence            467999999998775     233789999999999999999999999999999999997554

>d1kzfa_ d.108.1.3 (A:) Acyl-homoserinelactone synthase EsaI {Pantoea stewartii subsp. stewartii [TaxId: 66271]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: Autoinducer synthetase
domain: Acyl-homoserinelactone synthase EsaI
species: Pantoea stewartii subsp. stewartii [TaxId: 66271]

Probab=95.39  E-value=0.012  Score=54.13  Aligned_cols=100  Identities=10%  Similarity=0.106  Sum_probs=72.3

Q ss_pred             cccceeEEEeeecccCCCCcEEEEEEeeec-----------------cCCCceeEeeeeeeccCcccc------ChHHHH
Q 009150          124 LNGKYCTLLLKSSFMDDDDVVVAAITYQIV-----------------PADTQYAEVPLAAVSSIYQHK------GVGRLL  180 (542)
Q Consensus       124 ~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~-----------------~~d~~~aeI~~~AV~~~~Qgk------GiG~~L  180 (542)
                      ||......++..    ++|++||++=+..-                 +......|+--|||++++++.      .+...|
T Consensus        47 yD~~~~~~lv~~----~~g~~vG~~Rllp~~~~~~l~~~f~~l~~~~~~~~~i~E~sR~~V~~~~r~~~~~~~~~v~~~L  122 (210)
T d1kzfa_          47 FDGPGTRYILGI----CEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYGTESSRFFVDKARARALLGEHYPISQVL  122 (210)
T ss_dssp             TCSTTCEEEEEE----ETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSCEEEEEEEECHHHHHHHHCTTCCHHHHH
T ss_pred             cCCCCCEEEEEE----cCCeEEEEEEecCCCCCcchhhcchhhccCCCCCCCeEEEEEEEeccccccccccccchHHHHH
Confidence            565443343332    36899999843211                 112357899999999999865      377899


Q ss_pred             HHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccccccccCCCC
Q 009150          181 YLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVSLKFCFPVK  228 (542)
Q Consensus       181 v~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~~~~~~~~~~  228 (542)
                      +..+.+++.+.||.+++.++...-..+|++.||.....-.. ..+++.
T Consensus       123 ~~~~~~~a~~~Gi~~~~~v~~~~~~r~~~r~G~~~~~lg~~-~~~~g~  169 (210)
T d1kzfa_         123 FLAMVNWAQNNAYGNIYTIVSRAMLKILTRSGWQIKVIKEA-FLTEKE  169 (210)
T ss_dssp             HHHHHHHHHHTTCSEEEEEEEHHHHHHHHHHCCCCEEEEEE-ESSSSC
T ss_pred             HHHHHHHHHHCCCCEEEEEeCHHHHHHHHHCCCCeEEcCCC-cccCCe
Confidence            99999999999999999999999999999999965433221 255553

>d1iyka1 d.108.1.2 (A:60-224) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-myristoyl transferase, NMT
domain: N-myristoyl transferase, NMT
species: Yeast (Candida albicans) [TaxId: 5476]

Probab=95.01  E-value=0.021  Score=51.42  Aligned_cols=57  Identities=18%  Similarity=0.259  Sum_probs=48.9

Q ss_pred             CCCcEEEEEEeeecc-----CCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEE
Q 009150          140 DDDVVVAAITYQIVP-----ADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTI  196 (542)
Q Consensus       140 ~~~~VIg~i~~~i~~-----~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I  196 (542)
                      +++++||.|+++..-     .+.  ..+||-|+||+.++|.+|++..|++|+..++...||-..
T Consensus        86 ~~~kLvgfIs~~P~~i~i~~~~~~~~~~~INFLCVhKklR~KrlAPvLI~EitRr~n~~gI~qA  149 (165)
T d1iyka1          86 STGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQA  149 (165)
T ss_dssp             TTCCEEEEEEEEEEEEEETTTTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCE
T ss_pred             cCCcEEEEEecceEEEEEecCCcEEEEEEEEEEEEchhHhhcCCcHHHHHHHHHHhhccCeEEE
Confidence            467899999988652     233  569999999999999999999999999999999997654

>d1l0ba2 c.15.1.3 (A:1705-1801) Breast cancer associated protein, BRCA1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: BRCT domain
domain: Breast cancer associated protein, BRCA1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.82  E-value=0.034  Score=45.86  Aligned_cols=35  Identities=20%  Similarity=0.381  Sum_probs=31.0

Q ss_pred             CCCCeEEEEe-CCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          507 LLRGYNIIMA-AHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       507 LF~G~~f~Is-~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      ||+|+.||+. |...-+.++|+++++.|||+|++++
T Consensus         1 lf~~~~icc~gpFt~mt~d~Le~mv~lCGAsVvk~~   36 (97)
T d1l0ba2           1 LFEGLQIYCCEPFTNMPKDELERMLQLCGASVVKEL   36 (97)
T ss_dssp             CCTTCEEEECSCCSSSCHHHHHHHHHHTTCEEECSS
T ss_pred             CCCCceEEEEccccCCCHHHHHHHHHHcCceeecCh
Confidence            7999999885 6666789999999999999999876

>d1wf6a_ c.15.1.5 (A:) DNA topoisomerase II binding protein 1, TopBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA topoisomerase II binding protein 1, TopBP1
domain: DNA topoisomerase II binding protein 1, TopBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.45  E-value=0.028  Score=47.67  Aligned_cols=39  Identities=23%  Similarity=0.405  Sum_probs=33.1

Q ss_pred             CCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          503 RPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       503 ~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      .+..+|+|++|||++.....++.|.++|+.+||++...+
T Consensus        36 ~~~~~f~G~~i~isGf~~~~~~~l~~~i~~~GG~~~~~~   74 (132)
T d1wf6a_          36 APEDLLDGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQL   74 (132)
T ss_dssp             CCTTTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEESSC
T ss_pred             CchhhhCCeEEEEeeCCCHHHHHHHHHHHHcCCEEeccc
Confidence            356799999999998766668999999999999997654

>d1cdza_ c.15.1.1 (A:) DNA-repair protein XRCC1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA-repair protein XRCC1
domain: DNA-repair protein XRCC1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.28  E-value=0.029  Score=44.24  Aligned_cols=36  Identities=11%  Similarity=0.233  Sum_probs=29.3

Q ss_pred             CCCCCeEEEEeCCC-CCCHHHHHHHHHhCCCEEeccC
Q 009150          506 GLLRGYNIIMAAHI-QPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       506 ~LF~G~~f~Is~~v-~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      .+|+|++||+++.. ...++.|+++|+++||++...+
T Consensus         4 d~F~g~~f~v~g~~~~~~~~~l~~~i~~~GG~v~~~~   40 (96)
T d1cdza_           4 DFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYM   40 (96)
T ss_dssp             CTTTTCEEEECSCCCTHHHHHHHHHHHHTTCEECSSC
T ss_pred             cccCCcEEEEeCCCCHHHHHHHHHHHHHhCCEEeccC
Confidence            59999999998644 3347789999999999987643

>d1in1a_ c.15.1.2 (A:) DNA ligase III alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA ligase
domain: DNA ligase III alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.03  E-value=0.024  Score=45.69  Aligned_cols=36  Identities=11%  Similarity=0.250  Sum_probs=30.7

Q ss_pred             CCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEecc
Q 009150          504 PGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK  540 (542)
Q Consensus       504 ~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~  540 (542)
                      -..+|.|++|||...+ |+++.|+++|.+.||+++..
T Consensus        13 l~diF~G~~~~i~~~~-p~~~~L~r~i~a~GG~~~~~   48 (88)
T d1in1a_          13 LLDIFTGVRLYLPPST-PDFSRLRRYFVAFDGDLVQE   48 (88)
T ss_dssp             CCSSSTTCBCCCCTTS-TTHHHHHHHHHHHTCBCCCT
T ss_pred             hhhHhCCeEEEECCCC-CCHHHHHHHHHHhCCEEeee
Confidence            3679999999997644 77999999999999998754

>d1l0ba2 c.15.1.3 (A:1705-1801) Breast cancer associated protein, BRCA1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: BRCT domain
domain: Breast cancer associated protein, BRCA1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.23  E-value=0.33  Score=39.78  Aligned_cols=83  Identities=17%  Similarity=0.169  Sum_probs=47.6

Q ss_pred             CeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCc------ee-EEEECCCCCc-HHHHHHHh--cCCeEeCHHHHHHHH
Q 009150          398 CFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGST------ST-HVVTGKVRKT-LNFLTALC--SGAWIVSPNWLKESF  467 (542)
Q Consensus       398 ~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~------~T-HLIt~k~~RT-lKfL~AIA--~G~wIVSpsWL~dSl  467 (542)
                      ++.|++-|-...-.+.+|+.+++--|++|+.+...      .+ .||....-.| ..-..+|+  ..+++|+.+|+.||+
T Consensus         4 ~~~icc~gpFt~mt~d~Le~mv~lCGAsVvk~~~~l~~~~~~~~viVvqpda~t~~~~~~~i~~~~~~~vVtreWvLDSI   83 (97)
T d1l0ba2           4 GLQIYCCEPFTNMPKDELERMLQLCGASVVKELPLLTRDTGAHPIVLVQPSAWTEDNDCPDIGQLCKGRLVMWDWVLDSI   83 (97)
T ss_dssp             TCEEEECSCCSSSCHHHHHHHHHHTTCEEECSSSCGGGCCSSCCEEEEC-------------------CEEETHHHHHHH
T ss_pred             CceEEEEccccCCCHHHHHHHHHHcCceeecChhhcCCCCCCeeEEEEcCCccccccccHHHHHhccccEEehhHhhhhh
Confidence            35566533111112457999999999999988622      22 2444421112 22223444  357899999999999


Q ss_pred             HcCCCCCCCCccc
Q 009150          468 REGRFVDESSYML  480 (542)
Q Consensus       468 k~Gk~LdEe~YeL  480 (542)
                      ..-+..+-+.|.+
T Consensus        84 A~Y~~Q~l~~YL~   96 (97)
T d1l0ba2          84 SVYRCRDLDAYLV   96 (97)
T ss_dssp             HTTSCCCGGGGBC
T ss_pred             hheeeeehHhhhc
Confidence            9999988888864

>d1l7ba_ c.15.1.2 (A:) NAD+-dependent DNA ligase, domain 4 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA ligase
domain: NAD+-dependent DNA ligase, domain 4
species: Thermus thermophilus [TaxId: 274]

Probab=90.88  E-value=0.14  Score=41.42  Aligned_cols=38  Identities=21%  Similarity=0.508  Sum_probs=33.4

Q ss_pred             CCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150          504 PGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY  541 (542)
Q Consensus       504 ~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L  541 (542)
                      ....|.|.+|++++....++++++.+|+..||++...+
T Consensus         4 ~~~~l~G~~iv~TG~~~~~R~e~~~~i~~~Gg~v~~sV   41 (92)
T d1l7ba_           4 GGEALKGLTFVITGELSRPREEVKALLRRLGAKVTDSV   41 (92)
T ss_dssp             CCCSSTTCEEECSTTTTSCHHHHHHHHHHTTCEEESCC
T ss_pred             CCCCcCCCEEEEeCCccCCHHHHHHHHHHhCCEEcCcc
Confidence            35679999999999887789999999999999998764

>d1boba_ d.108.1.1 (A:) Histone acetyltransferase HAT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Histone acetyltransferase HAT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.02  E-value=2.2  Score=41.39  Aligned_cols=102  Identities=14%  Similarity=0.121  Sum_probs=61.9

Q ss_pred             HHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeecc------------CCCceeEe
Q 009150           95 VLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVP------------ADTQYAEV  162 (542)
Q Consensus        95 ~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~------------~d~~~aeI  162 (542)
                      ++.++.|--+.+..+-+.|-.   |--  -|..+.-.+++..   ....++|-++..-+|            ++.-=.-|
T Consensus       141 ~~~~~~rlq~f~~~FIe~~S~---Id~--dD~~W~~~~~~ek---~~~~~~Gy~T~Y~~~~Y~~~~~f~~~~~~~~R~RI  212 (315)
T d1boba_         141 ARRMHRRVQIFSLLFIEAANY---IDE--TDPSWQIYWLLNK---KTKELIGFVTTYKYWHYLGAKSFDEDIDKKFRAKI  212 (315)
T ss_dssp             HHHHHHHHTHHHHHHSTTCCC---CCT--TCTTEEEEEEEET---TTCCEEEEEEEEEECCC---------CCCCEEEEE
T ss_pred             HHHHHHHHHHHHHHHCcCCCc---ccc--CCCCEEEEEEEec---CCCcccceeeeeeeeecccccccccccccccccee
Confidence            445555433344445555543   432  2556666666643   234699976665543            12212449


Q ss_pred             eeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEcccc-chhh
Q 009150          163 PLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDKE-SEGF  207 (542)
Q Consensus       163 ~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~~-A~~F  207 (542)
                      -++.|-|-|||+|+|+.|++.+-+++.. -++..   +|+.+ ++.|
T Consensus       213 SQ~LILPPyQ~kG~G~~L~~~iy~~~~~d~~v~e---iTVEDPse~F  256 (315)
T d1boba_         213 SQFLIFPPYQNKGHGSCLYEAIIQSWLEDKSITE---ITVEDPNEAF  256 (315)
T ss_dssp             EEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEE---EEESSCCHHH
T ss_pred             EEEEEeCccccCCchHHHHHHHHHHHhcCCCeee---ccccCChHHH
Confidence            9999999999999999999998766664 45444   34443 5544

>d1lrza3 d.108.1.4 (A:166-244,A:310-412) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: FemXAB nonribosomal peptidyltransferases
domain: Methicillin resistance protein FemA
species: Staphylococcus aureus [TaxId: 1280]

Probab=83.62  E-value=0.9  Score=39.18  Aligned_cols=80  Identities=15%  Similarity=0.101  Sum_probs=58.3

Q ss_pred             ccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcE
Q 009150          116 SMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRT  195 (542)
Q Consensus       116 ~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~  195 (542)
                      .+|+.++ ++.....+.++...  .+|++||++.+.... +  .++..+.+.+++++..+.+..|+-++.+++++.|++.
T Consensus        57 ~~~~~~l-~~~~~~~~~l~~a~--~~~~~ia~~l~~~~~-~--~~~y~~~~~~~~~~~~~~~~ll~~~~i~~a~~~G~~~  130 (182)
T d1lrza3          57 DKFYYNR-LKYYKDRVLVPLAY--INELPISAGFFFINP-F--EVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHGIDR  130 (182)
T ss_dssp             HHHHHHH-HHHHGGGEECEEEE--EEEEEEEEEEEEECS-S--CEEEEEEEECGGGGGGCHHHHHHHHHHHHHHHTTCCE
T ss_pred             HHHHHHH-HHhccccEeeeeee--cCCccEEEEEEEeec-h--hheeeeceeccchhhcCchHHHHHHHHHHHHHcCCcE
Confidence            4555554 33333344444332  467899987666555 3  5666778999999999999999999999999999999


Q ss_pred             EEEEcc
Q 009150          196 IFCWGD  201 (542)
Q Consensus       196 I~l~a~  201 (542)
                      .-+.+.
T Consensus       131 ~D~gG~  136 (182)
T d1lrza3         131 YNFYGV  136 (182)
T ss_dssp             EEEEEC
T ss_pred             EEecCc
Confidence            877653