Citrus Sinensis ID: 009288

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------54

MQETVQLIVPPPTQAQQHQHQHQHQHQHQHPKPNSRRVTPTRDTGGGVVVEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGKGVFTWSNHENMKNDERDNFEVMGARKRSSSADPARPRIYIWELDGEAGDITCDIVDKAEAASMLYKNQFGGPPNGIGQFQKSPCSSADGEVKKPGHTISKGHKNYDLMLNLQLGIRHSVGKHASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIR

cccEEEEEcccccccHHHHcccccccEEcccccccccccccccccccEEEEEEcccccEEEEEEEcccccEEEEEEEccccEEEEEEcccccccEEEEEcccccEEEEEEcccccccEEEEEEEcccEEEEEEcccccccccEEEEccccEEEEEEccccccccEEEEEccccEEEEEEEcccEEcEEEEEEccccEEEEEEEccccccEEEEEEcccccccccccccEEcccEEEEccccccccccEEEccccccccccEEEccHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEcccccccHHHHHccEEEEEcccccccccccccccccccEEEEEccccccccccccccccEEEEEcccHHHHHHHHHHcccccHHHHHHcccccccccccccccEEEEEEEcccEEEEEEcccHHHHHHHHHcHHHHHHHHHcccccccccEEEEEEEEcccEEEEEEEEccccccccccEEccccccccccccccccccccccccccccccccccccccHHHHHHHHc

ccccEEEEEcccccccccccccccccccccccccccEEccccccccccEEEEEcccccEEEEEEcccccccccEEEEccccEEEEEEccccccccEEEEcccccEEEEEcccccccccEEEEcccccEEEEEEEcccccccEEEEEcccccEccccccccccccEEEEEEcccEEEEEEccccEcccEEEEEccccEEEEEcccccccccEEEEccccccEEcccccccccccccEcccccccccccccEccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccHHHHHHHEEcEEEEcccccccccHccHHcccccEEEEEccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHcccccccEEEEEEccccEEHHHHcHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccccEEEEEEEcccccccEEEEEEEccccccccccccccHHHcccccccccccccccEEccHHHHHHHHc

mqetvqlivppptqaqqhqhqhqhqhqhqhpkpnsrrvtptrdtgggvvvekilpngdlytgavsgnaphgvgkyvwsdrcmyegewrkgrasgkgkfswpsgatyeggfksgrmdgegtfvgvegdtyrgswsndrkhgygekryangdvyrgswrfnlmdgygkyawsdgnvyegewkngvifgkgtlswnngnryegcwdnglpkgkgvftwsnhenmknderdnfevmgarkrsssadparpriyiweldgeagditCDIVDKAEAASMLYknqfggppngigqfqkspcssadgevkkpghtiskghknYDLMLNLQLGIRHSVGKHASVMRELrqsdfepkekfwtrfppegskftpphqsmdfrwkdycPMVFRHLRELFAIDPADYMLAICGDdalrelsspgksgsffyltqDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFgvhcvkpvggqktRFIVMGNLFcseyrihrrfdlkgssygritdkpeeeidetttlkdldldfVFRLDRSWFQELIR

MQETVQLIVPPPTQAQQHQHQHQHqhqhqhpkpnsrrvtptrdtGGGVVVEKILPNGDLYTgavsgnaphgvgkYVWSDRCMYEGEWRkgrasgkgkfswpsgATYEGGFKSGRMDGEGTFVGvegdtyrgswsndrkhgygekryangdvyrGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGKGVFTWSNHENMKNDERDNFEVMgarkrsssadparprIYIWeldgeagdITCDIVDKAEAASMLYKNQFGGPPNGIGQFQKSPCSSADGEVKKPghtiskghknYDLMLNLQLGIRHSVGKHASVMRElrqsdfepkekfwtrfppegskftpphqsmdfRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRrfdlkgssygritdkpeeeidetttlkdldldfvFRLDRSWFQELIR

MQETVQLIVPPPTQAqqhqhqhqhqhqhqhPKPNSRRVTPTRDTGGGVVVEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGKGVFTWSNHENMKNDERDNFEVMGARKRSSSADPARPRIYIWELDGEAGDITCDIVDKAEAASMLYKNQFGGPPNGIGQFQKSPCSSADGEVKKPGHTISKGHKNYDLMLNLQLGIRHSVGKHASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPeeeidetttlkdldldfvfrldrSWFQELIR

*********************************************GGVVVEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFK****DGEGTFVGVEGDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGKGVFTWS******************************RIYIWELDGEAGDITCDIVDKAEAASMLYKNQF*********************************KNYDLMLNLQLGIRHSVGK*******************W****************MDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELS***KSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRI*********ETTTLKDLDLDFVFRLDRSWFQEL**

****VQ**********************QHPKPNSRRVTPTRDTGGGVVVEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGKGVFTWSNHENMKNDERDNFEVMGARKRSSSADPARPRIYIWELDGEAGDITCDIVDKAEAASMLYKNQFGGPPNGIGQFQKSPCSSADGEVKKPGHTISKGHKNYDLMLNLQLGIRHSVGKHA******RQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSY***************TLKDLDLDFVFRLDRSWFQELIR

MQETVQLIVP*******************************RDTGGGVVVEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEW**********FSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGKGVFTWSNHENMKNDERDNFEVMG*********PARPRIYIWELDGEAGDITCDIVDKAEAASMLYKNQFGGPPNGIGQFQKSPCSSADGEVKKPGHTISKGHKNYDLMLNLQLGIRHSVGKHASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIR

***TVQLIVPPPTQA*********QHQHQHPKPNSRRVTPTRDTGGGVVVEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGKGVFTWSNHENMKNDERDN*******K*****DPARPRIY*WEL*******T*****************************************KPGHTISKGHKNYDLMLNLQLGIRHSVGKHASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIR

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		538	2.2.26 [Sep-21-2011]
Q8L796		754	Phosphatidylinositol 4-ph	yes	no	0.927	0.661	0.703	0.0
Q56YP2		752	Phosphatidylinositol 4-ph	no	no	0.927	0.663	0.701	0.0
O48709		705	Phosphatidylinositol 4-ph	no	no	0.977	0.746	0.617	0.0
Q9M1K2		779	Phosphatidylinositol 4-ph	no	no	0.901	0.622	0.519	1e-159
Q9SLG9		772	Phosphatidylinositol 4-ph	no	no	0.907	0.632	0.514	1e-156
Q9SFB8		715	Phosphatidylinositol 4-ph	no	no	0.907	0.682	0.508	1e-148
Q6EX42		801	Phosphatidylinositol 4-ph	no	no	0.894	0.600	0.434	1e-127
Q8L850		815	Phosphatidylinositol 4-ph	no	no	0.931	0.614	0.430	1e-123
Q9SUI2		754	Phosphatidylinositol 4-ph	no	no	0.894	0.637	0.432	1e-119
Q8RY89		769	Phosphatidylinositol 4-ph	no	no	0.884	0.618	0.402	1e-107

>sp\|Q8L796\|PI5K2_ARATH Phosphatidylinositol 4-phosphate 5-kinase 2 OS=Arabidopsis thaliana GN=PIP5K2 PE=1 SV=2	Back alignment and function desciption

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/526 (70%), Positives = 424/526 (80%), Gaps = 27/526 (5%)

Query: 34  NSRRVTPTRDTGGGVVVEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRAS 93
            +RRVTPT      V VEK LPNGDLY G  SG  P+G GKY+W D CMYEGEW++G+AS
Sbjct: 59  TTRRVTPTPPP---VDVEKPLPNGDLYMGTFSGGFPNGSGKYLWKDGCMYEGEWKRGKAS 115

Query: 94  GKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYRGSWSNDRKHGYGEKRYANGDVYR 153
           GKGKFSWPSGATYEG FKSGRM+G GTFVGV+GDTYRGSW  DRK G+G+KRYANGD Y 
Sbjct: 116 GKGKFSWPSGATYEGEFKSGRMEGSGTFVGVDGDTYRGSWVADRKQGHGQKRYANGDYYE 175

Query: 154 GSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGKGVF 213
           G+WR NL DG G+Y W +GN Y GEW+NGVI GKG L+W NGNRYEG W+NG+PKG GVF
Sbjct: 176 GTWRRNLQDGRGRYVWMNGNQYTGEWRNGVICGKGVLAWPNGNRYEGQWENGVPKGSGVF 235

Query: 214 TWSN----------HENMKNDERDNFE----VMGARKRSS--------SADPARPRIYIW 251
           TW++            N+  +  D  E    ++  RKRSS        + +   PRI IW
Sbjct: 236 TWADGSSWIGSWNESSNLMRNFFDGIEKNELIVATRKRSSVDSGAGSLTGEKIFPRICIW 295

Query: 252 ELDGEAGDITCDIVDKAEAASMLYKNQFGGPPNGIGQFQKSPCSSADGEVKKPGHTISKG 311
           E DGEAGDITCDIVD  EA S++Y+++     +G  QF+K+PC  + GE KKPG TISKG
Sbjct: 296 ESDGEAGDITCDIVDNVEA-SVIYRDRISIDKDGFRQFRKNPCCFS-GEAKKPGETISKG 353

Query: 312 HKNYDLMLNLQLGIRHSVGKHASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFR 371
           HK YDLMLNLQ GIR+SVGKHASV+R+L+QSDF+P EKFWTRFPPEGSK TPPH S+DFR
Sbjct: 354 HKKYDLMLNLQHGIRYSVGKHASVVRDLKQSDFDPSEKFWTRFPPEGSKTTPPHLSVDFR 413

Query: 372 WKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVK 431
           WKDYCP+VFR LRELF +DPADYMLAICG+DALRELSSPGKSGSFFYLTQDDRFMIKTVK
Sbjct: 414 WKDYCPLVFRRLRELFTVDPADYMLAICGNDALRELSSPGKSGSFFYLTQDDRFMIKTVK 473

Query: 432 KSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHR 491
           KSEVKVL+RMLPSYY+HVCQY+NTLVT+F+GVHC+KPVGGQKTRFIVMGNLFCSEYRI R
Sbjct: 474 KSEVKVLLRMLPSYYKHVCQYENTLVTRFYGVHCIKPVGGQKTRFIVMGNLFCSEYRIQR 533

Query: 492 RFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELI 537
           RFDLKGSS+GR T KPE EIDETTTLKDLDL+F FRL R+W+QEL+
Sbjct: 534 RFDLKGSSHGRYTSKPEGEIDETTTLKDLDLNFAFRLQRNWYQELM 579

Possesses phosphatidylinositol kinase activity in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 6EC: 8

>sp\|Q56YP2\|PI5K1_ARATH Phosphatidylinositol 4-phosphate 5-kinase 1 OS=Arabidopsis thaliana GN=PIP5K1 PE=1 SV=1	Back alignment and function description

>sp\|O48709\|PI5K3_ARATH Phosphatidylinositol 4-phosphate 5-kinase 3 OS=Arabidopsis thaliana GN=PIP5K3 PE=4 SV=1	Back alignment and function description

>sp\|Q9M1K2\|PI5K4_ARATH Phosphatidylinositol 4-phosphate 5-kinase 4 OS=Arabidopsis thaliana GN=PIP5K4 PE=1 SV=1	Back alignment and function description

>sp\|Q9SLG9\|PI5K5_ARATH Phosphatidylinositol 4-phosphate 5-kinase 5 OS=Arabidopsis thaliana GN=PIP5K5 PE=2 SV=1	Back alignment and function description

>sp\|Q9SFB8\|PI5K6_ARATH Phosphatidylinositol 4-phosphate 5-kinase 6 OS=Arabidopsis thaliana GN=PIP5K6 PE=2 SV=1	Back alignment and function description

>sp\|Q6EX42\|PI5K1_ORYSJ Phosphatidylinositol 4-phosphate 5-kinase 1 OS=Oryza sativa subsp. japonica GN=PIPK1 PE=2 SV=2	Back alignment and function description

>sp\|Q8L850\|PI5K9_ARATH Phosphatidylinositol 4-phosphate 5-kinase 9 OS=Arabidopsis thaliana GN=PIP5K9 PE=1 SV=2	Back alignment and function description

>sp\|Q9SUI2\|PI5K7_ARATH Phosphatidylinositol 4-phosphate 5-kinase 7 OS=Arabidopsis thaliana GN=PIP5K7 PE=1 SV=1	Back alignment and function description

>sp\|Q8RY89\|PI5K8_ARATH Phosphatidylinositol 4-phosphate 5-kinase 8 OS=Arabidopsis thaliana GN=PIP5K8 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		538
255544417		711	phosphatidylinositol-4-phosphate 5-kinas	0.966	0.731	0.705	0.0
224084834		789	predicted protein [Populus trichocarpa]	0.970	0.661	0.667	0.0
302141871		813	unnamed protein product [Vitis vinifera]	0.907	0.600	0.739	0.0
356507422		720	PREDICTED: phosphatidylinositol-4-phosph	0.894	0.668	0.739	0.0
255545524		774	phosphatidylinositol-4-phosphate 5-kinas	0.936	0.651	0.699	0.0
224122698		741	predicted protein [Populus trichocarpa]	0.970	0.704	0.695	0.0
225459461		770	PREDICTED: phosphatidylinositol-4-phosph	0.985	0.688	0.657	0.0
224063146		733	predicted protein [Populus trichocarpa]	0.910	0.668	0.702	0.0
356527554		706	PREDICTED: phosphatidylinositol-4-phosph	0.968	0.737	0.693	0.0
15217451		754	phosphatidylinositol-4-phosphate 5-kinas	0.927	0.661	0.703	0.0

>gi\|255544417\|ref\|XP_002513270.1\| phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis] gi\|223547644\|gb\|EEF49138.1\| phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/556 (70%), Positives = 445/556 (80%), Gaps = 36/556 (6%)

Query: 1   MQETVQLIVPPPTQAQQHQHQHQHQHQHQHPKPNSRRVTPTRDTGGGVVVEKILPNGDLY 60
           MQET+  I  P +  +Q  + ++   Q      + RRVTPT      VV EK+LPNGD+Y
Sbjct: 1   MQETLLRISQPTSTDKQDNNNNKKNKQ-----TSCRRVTPTTSI---VVSEKLLPNGDIY 52

Query: 61  TGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGT 120
           TG +SG+ PHG GKY+WSD CMYEGEWRKG+A+G GKFSWPSGATYEG FK G+M+G+GT
Sbjct: 53  TGTLSGSVPHGKGKYLWSDGCMYEGEWRKGKANGNGKFSWPSGATYEGTFKDGKMNGQGT 112

Query: 121 FVGVEGDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWK 180
           F+G+EGD+YRG W +DRKHGYGEK Y NGDVY G WR NL DG GKY WS+GN Y GEWK
Sbjct: 113 FIGIEGDSYRGQWLSDRKHGYGEKCYGNGDVYEGWWRCNLQDGEGKYRWSNGNGYFGEWK 172

Query: 181 NGVIFGKGTLSWNNGNRYEGCWDNGLPKGKGVFTWSNHENMKNDERDNFEVMGARKRSSS 240
           NG+I G+G L W NGN+YEG W+NG+PKGKGVFT++N          N +  G+ KRSS 
Sbjct: 173 NGLIHGRGVLVWANGNKYEGYWENGVPKGKGVFTFAN----------NNKYEGSLKRSSC 222

Query: 241 ADP-ARPRIYIWELDGEAGDITCDIVDKAEAASMLY-----KNQFGGPPNG--------- 285
            D  + PRI IWELDGEAGDITCDIVD  EAAS++Y      +   G  NG         
Sbjct: 223 VDANSYPRICIWELDGEAGDITCDIVDNVEAASIMYYDSKDSDAEEGCCNGKESSNIAVV 282

Query: 286 IGQFQ---KSPCSSADGEVKKPGHTISKGHKNYDLMLNLQLGIRHSVGKHASVMRELRQS 342
           +   Q    SPCSSADG+VKKPG TISKGHKNYDLM+NLQLGIR+SVGKH  +MRELRQS
Sbjct: 283 VDNLQCQRSSPCSSADGDVKKPGQTISKGHKNYDLMINLQLGIRYSVGKHDLLMRELRQS 342

Query: 343 DFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDD 402
           DF+PKEKFWTRFP EGSK TPPHQS+DF+WKDYCPMVFRHLRELFAIDPADYM+AICG+D
Sbjct: 343 DFDPKEKFWTRFPLEGSKITPPHQSVDFKWKDYCPMVFRHLRELFAIDPADYMVAICGND 402

Query: 403 ALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFG 462
           ALRE SSPGKSGSFFYLTQDDRFMIKTV+KSEVKVLIRMLP+YYQHVCQYKN+L+TKFFG
Sbjct: 403 ALREFSSPGKSGSFFYLTQDDRFMIKTVRKSEVKVLIRMLPNYYQHVCQYKNSLITKFFG 462

Query: 463 VHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDL 522
           VHCVKPVGGQK RFIVMGNLFCSEYRIH+RFDLKGSSYGR TDK E EIDE TTLKDLDL
Sbjct: 463 VHCVKPVGGQKIRFIVMGNLFCSEYRIHKRFDLKGSSYGRATDKAEGEIDEMTTLKDLDL 522

Query: 523 DFVFRLDRSWFQELIR 538
           +FVFRL+RSW+QELIR
Sbjct: 523 NFVFRLERSWYQELIR 538

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224084834\|ref\|XP_002307416.1\| predicted protein [Populus trichocarpa] gi\|222856865\|gb\|EEE94412.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|302141871\|emb\|CBI19074.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356507422\|ref\|XP_003522466.1\| PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|255545524\|ref\|XP_002513822.1\| phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis] gi\|223546908\|gb\|EEF48405.1\| phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224122698\|ref\|XP_002330446.1\| predicted protein [Populus trichocarpa] gi\|222871858\|gb\|EEF08989.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225459461\|ref\|XP_002284379.1\| PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 1 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224063146\|ref\|XP_002301013.1\| predicted protein [Populus trichocarpa] gi\|222842739\|gb\|EEE80286.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356527554\|ref\|XP_003532374.1\| PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 1-like [Glycine max]	Back alignment and taxonomy information

>gi|15217451|ref|NP_177897.1| phosphatidylinositol-4-phosphate 5-kinase 2 [Arabidopsis thaliana] gi|78099093|sp|Q8L796.2|PI5K2_ARATH RecName: Full=Phosphatidylinositol 4-phosphate 5-kinase 2; Short=AtPIP5K2; AltName: Full=1-phosphatidylinositol 4-phosphate kinase 2; AltName: Full=Diphosphoinositide kinase 2; AltName: Full=PtdIns(4)P-5-kinase 2 gi|12323291|gb|AAG51623.1|AC012193_5 putative phosphatidylinositol-4-phosphate-5-kinase; 27989-31218 [Arabidopsis thaliana] gi|332197894|gb|AEE36015.1| phosphatidylinositol-4-phosphate 5-kinase 2 [Arabidopsis thaliana]

Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		538
TAIR\|locus:2066246		705	PIP5K3 "1-phosphatidylinositol	0.903	0.689	0.622	2.3e-174
TAIR\|locus:2203211		754	PIP5K2 "phosphatidylinositol-4	0.888	0.633	0.569	8.1e-147
TAIR\|locus:2077397		715	PIP5K6 "phosphatidylinositol-4	0.440	0.331	0.65	1.8e-146
TAIR\|locus:2201108		752	PIP5K1 "phosphatidylinositol-4	0.888	0.635	0.561	5.7e-146
TAIR\|locus:2085074		815	PIP5K9 "phosphatidyl inositol	0.384	0.253	0.668	2.7e-128
TAIR\|locus:2197454		754	AT1G10900 [Arabidopsis thalian	0.371	0.265	0.626	8.7e-115
TAIR\|locus:2080585		779	PIP5K4 "phosphatidyl inositol	0.871	0.602	0.448	1.7e-107
TAIR\|locus:2040327		772	PIP5K5 "phosphatidylinositol-	0.862	0.601	0.443	1.2e-104
CGD\|CAL0002340		721	MSS4 [Candida albicans (taxid:	0.366	0.273	0.490	6.6e-47
UNIPROTKB\|Q59L34		721	MSS4 "Putative uncharacterized	0.366	0.273	0.490	6.6e-47

TAIR\|locus:2066246 PIP5K3 "1-phosphatidylinositol-4-phosphate 5-kinase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1694 (601.4 bits), Expect = 2.3e-174, P = 2.3e-174
 Identities = 316/508 (62%), Positives = 380/508 (74%)

Query:    49 VVEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEG 108
             +VEK+L NGDLY G +S   PHG GKY+WSD CMYEGEW +G+ASGKG+FSWPSGATYEG
Sbjct:    47 IVEKVLKNGDLYNGGLSAGVPHGTGKYLWSDGCMYEGEWTRGKASGKGRFSWPSGATYEG 106

Query:   109 GFKSGRMDGEGTFVGVEGDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYA 168
              FK GRMDGEGTF+G++GDTYRG W   RKHGYGEKRYANGD Y+G+W+ NL DG G+Y 
Sbjct:   107 QFKDGRMDGEGTFIGIDGDTYRGHWLWGRKHGYGEKRYANGDGYQGNWKANLQDGNGRYV 166

Query:   169 WSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGKGVFTWSNHENMKN----- 223
             WSDGN Y GEWKNGVI GKG ++W NGNRY+G W+NG P GKGV +W   +   N     
Sbjct:   167 WSDGNEYVGEWKNGVISGKGKMTWANGNRYDGLWENGAPVGKGVLSWGEEKTSYNGWGRK 226

Query:   224 DERDNFEVMGARKRSS----SADPARPRIYIWELDGEAGDITCDIVDKA----EA-ASML 274
              ++ + E++   K SS    SA+   PRI I EL+ + G   CD V+ +    E+  S  
Sbjct:   227 SKKKDEEIVQNHKLSSVETLSANTNFPRICISELE-DTG--VCDHVEASPYTSESDTSGC 283

Query:   275 YKNQFGGPP-----NGIGQFQKSPCSSADGEVKKPGHTISKGHKNYDLMLNLQLGIRHSV 329
              + ++   P      G    Q+SP    +G+VKKPGHT++ GHKNYDLMLNLQLGIR+SV
Sbjct:   284 GEQEWARSPLLLESGGAMSVQQSPRWLDEGDVKKPGHTVTAGHKNYDLMLNLQLGIRYSV 343

Query:   330 GKHASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFRHLRELFAI 389
             GKHAS++RELR SDF+PK+K WTRFPPEGSK TPPH S +F+WKDYCP+VFRHLR+LFAI
Sbjct:   344 GKHASLLRELRHSDFDPKDKQWTRFPPEGSKSTPPHLSAEFKWKDYCPIVFRHLRDLFAI 403

Query:   390 DPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHV 449
             D ADYMLAICG+++LRE +SPGKSGS FYLTQD+R+MIKT+KKSE+KVL++MLP+YY+HV
Sbjct:   404 DQADYMLAICGNESLREFASPGKSGSAFYLTQDERYMIKTMKKSEIKVLLKMLPNYYEHV 463

Query:   450 CQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPXX 509
              +YKN+LVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIH+RFDLKGSS+GR  DK   
Sbjct:   464 SKYKNSLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHKRFDLKGSSHGRTIDKDEG 523

Query:   510 XXXXXXXXXXXXXXXXXXXXXSWFQELI 537
                                  SWFQ  I
Sbjct:   524 EIDETTTLKDLDLKYVFRLETSWFQAFI 551

GO:0005524 "ATP binding" evidence=IEA

GO:0016307 "phosphatidylinositol phosphate kinase activity" evidence=IEA

GO:0016308 "1-phosphatidylinositol-4-phosphate 5-kinase activity" evidence=IEA;ISS;IDA

GO:0046488 "phosphatidylinositol metabolic process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0048767 "root hair elongation" evidence=RCA;IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0048768 "root hair cell tip growth" evidence=IMP

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR\|locus:2203211 PIP5K2 "phosphatidylinositol-4-phosphate 5-kinase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2077397 PIP5K6 "phosphatidylinositol-4-phosphate 5-kinase 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2201108 PIP5K1 "phosphatidylinositol-4-phosphate 5-kinase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2085074 PIP5K9 "phosphatidyl inositol monophosphate 5 kinase" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2197454 AT1G10900 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2080585 PIP5K4 "phosphatidyl inositol monophosphate 5 kinase 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2040327 PIP5K5 "phosphatidylinositol- 4-phosphate 5-kinase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

CGD\|CAL0002340 MSS4 [Candida albicans (taxid:5476)]	Back alignment and assigned GO terms

UNIPROTKB\|Q59L34 MSS4 "Putative uncharacterized protein MSS4" [Candida albicans SC5314 (taxid:237561)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8L796	PI5K2_ARATH	2, ., 7, ., 1, ., 6, 8	0.7034	0.9275	0.6618	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.1.68	0.914
3rd Layer	2.7.1	0.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		538
PLN03185		765	PLN03185, PLN03185, phosphatidylinositol phosphate	1e-164
cd00139		313	cd00139, PIPKc, Phosphatidylinositol phosphate kin	1e-105
smart00330		342	smart00330, PIPKc, Phosphatidylinositol phosphate	5e-97
PLN03185		765	PLN03185, PLN03185, phosphatidylinositol phosphate	2e-72
pfam01504		255	pfam01504, PIP5K, Phosphatidylinositol-4-phosphate	6e-66
COG5253		612	COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-	5e-33
COG4642		139	COG4642, COG4642, Uncharacterized protein conserve	2e-18
COG4642		139	COG4642, COG4642, Uncharacterized protein conserve	7e-17
PLN03185		765	PLN03185, PLN03185, phosphatidylinositol phosphate	2e-16
COG4642		139	COG4642, COG4642, Uncharacterized protein conserve	9e-14
COG4642		139	COG4642, COG4642, Uncharacterized protein conserve	2e-08
COG4642		139	COG4642, COG4642, Uncharacterized protein conserve	6e-08
COG4642		139	COG4642, COG4642, Uncharacterized protein conserve	8e-08
COG4642		139	COG4642, COG4642, Uncharacterized protein conserve	2e-05
pfam02493		23	pfam02493, MORN, MORN repeat	6e-04
pfam02493		23	pfam02493, MORN, MORN repeat	0.001
pfam02493		23	pfam02493, MORN, MORN repeat	0.003
pfam02493		23	pfam02493, MORN, MORN repeat	0.003
smart00698		22	smart00698, MORN, Possible plasma membrane-binding	0.003
smart00698		22	smart00698, MORN, Possible plasma membrane-binding	0.003

>gnl\|CDD\|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional	Back alignment and domain information

 Score =  485 bits (1249), Expect = e-164
 Identities = 225/529 (42%), Positives = 293/529 (55%), Gaps = 55/529 (10%)

Query: 55  PNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGR 114
           P+G  Y G  SG   HG G Y  +D   Y+G WR     G G   +P+G  +EG +  G 
Sbjct: 52  PSGATYEGEFSGGYMHGSGTYTGTDGTTYKGRWRLNLKHGLGYQRYPNGDVFEGSWIQGL 111

Query: 115 MDGEGTFVGVEGDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNV 174
            +G G +    G+ Y G     +  G G   + +GD Y G W   +M G+G Y WSDG  
Sbjct: 112 QEGPGKYTWANGNVYLGDMKGGKMSGKGTLTWVSGDSYEGQWLDGMMHGFGVYTWSDGGC 171

Query: 175 YEGEWK------NGVIFGKGTLSWNNGNRYEGCWDNG--LPKGKGVFTWSNHENMKNDER 226
           Y G W        GV +  G+        Y         LP  +      +  N +   R
Sbjct: 172 YVGTWTRGLKDGKGVFYPAGSRVPAVQEFYLNALRKRGVLPDLRRQNQVLSSHNSEQLSR 231

Query: 227 DNFEVMGARKRSS--------------------SADPARPRIYIWELDGEAGDITCDIVD 266
                  + K S                     S + +  ++   +  G +  +  +  +
Sbjct: 232 GV----SSDKLSKGSLLPLEQSRNRNVSLERRWSLEVSIEKVIGHDYSGSSSAVLDEGSE 287

Query: 267 KAEAAS----------------MLYKNQFGGPPNGIGQFQKSPCSSADGEVKKPGHTISK 310
               A+                ++  N F        + QK        E+K+PG TI K
Sbjct: 288 VEYKANRPILEREYMQGVLISELVLNNSFSSTSRRAKRRQKKLVK----EIKRPGETIIK 343

Query: 311 GHKNYDLMLNLQLGIRHSVGKHASVMR-ELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMD 369
           GH++YDLML+LQLGIR++VGK   + R E+R SDF P+  FW  FP  GS+ TP HQS D
Sbjct: 344 GHRSYDLMLSLQLGIRYTVGKITPIQRREVRPSDFGPRASFWMNFPKAGSQLTPSHQSED 403

Query: 370 FRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKT 429
           F+WKDYCPMVFR+LRE+F ID ADYM++ICG+DALRELSSPGKSGS F+L+QDDRFMIKT
Sbjct: 404 FKWKDYCPMVFRNLREMFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKT 463

Query: 430 VKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRI 489
           ++KSEVKVL+RMLP Y+ HV  Y+NTL+TKFFG+H +KP  GQK RF+VMGN+FC+E RI
Sbjct: 464 LRKSEVKVLLRMLPDYHHHVKTYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRI 523

Query: 490 HRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVFRLDRSWFQELIR 538
           HRRFDLKGSS GR  DK   EIDE TTLKDLDL++ F L+ SW   L+R
Sbjct: 524 HRRFDLKGSSLGRSADKV--EIDENTTLKDLDLNYSFYLEPSWRDALLR 570

Length = 765

>gnl\|CDD\|238081 cd00139, PIPKc, Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate	Back alignment and domain information

>gnl\|CDD\|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases	Back alignment and domain information

>gnl\|CDD\|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional	Back alignment and domain information

>gnl\|CDD\|216538 pfam01504, PIP5K, Phosphatidylinositol-4-phosphate 5-Kinase	Back alignment and domain information

>gnl\|CDD\|227578 COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]	Back alignment and domain information

>gnl\|CDD\|226989 COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>gnl\|CDD\|226989 COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>gnl\|CDD\|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional	Back alignment and domain information

>gnl\|CDD\|226989 COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>gnl\|CDD\|226989 COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>gnl\|CDD\|226989 COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>gnl\|CDD\|226989 COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>gnl\|CDD\|226989 COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>gnl\|CDD\|202256 pfam02493, MORN, MORN repeat	Back alignment and domain information

>gnl\|CDD\|202256 pfam02493, MORN, MORN repeat	Back alignment and domain information

>gnl\|CDD\|202256 pfam02493, MORN, MORN repeat	Back alignment and domain information

>gnl\|CDD\|202256 pfam02493, MORN, MORN repeat	Back alignment and domain information

>gnl\|CDD\|197832 smart00698, MORN, Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases	Back alignment and domain information

>gnl\|CDD\|197832 smart00698, MORN, Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		538
PLN03185		765	phosphatidylinositol phosphate kinase; Provisional	100.0
KOG0229		420	consensus Phosphatidylinositol-4-phosphate 5-kinas	100.0
cd00139		313	PIPKc Phosphatidylinositol phosphate kinases (PIPK	100.0
smart00330		342	PIPKc Phosphatidylinositol phosphate kinases.	100.0
PLN03185		765	phosphatidylinositol phosphate kinase; Provisional	100.0
COG5253		612	MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Si	100.0
PF01504		252	PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase;	100.0
KOG0230		1598	consensus Phosphatidylinositol-4-phosphate 5-kinas	99.95
COG4642		139	Uncharacterized protein conserved in bacteria [Fun	99.8
COG4642		139	Uncharacterized protein conserved in bacteria [Fun	99.78
KOG0231		455	consensus Junctional membrane complex protein Junc	99.77
KOG0231		455	consensus Junctional membrane complex protein Junc	99.71
COG2849		230	Uncharacterized protein conserved in bacteria [Fun	98.03
COG2849		230	Uncharacterized protein conserved in bacteria [Fun	98.02
smart00698		26	MORN Possible plasma membrane-binding motif in jun	97.47
PF02493		23	MORN: MORN repeat; InterPro: IPR003409 The MORN (M	97.35
smart00698		26	MORN Possible plasma membrane-binding motif in jun	97.31
PF02493		23	MORN: MORN repeat; InterPro: IPR003409 The MORN (M	97.28

>PLN03185 phosphatidylinositol phosphate kinase; Provisional	Back alignment and domain information

Probab=100.00  E-value=3.9e-114  Score=957.53  Aligned_cols=485  Identities=55%  Similarity=1.003  Sum_probs=420.5

Q ss_pred             EEEcCCCCEEEEEEECCEEeeeEEEEEcCCcEEEEEEECCeEeceeEEEeCCCCeEEEEEeCCeeeeeeEEEeecCCEEE
Q 009288           51 EKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYR  130 (538)
Q Consensus        51 ~~~~~nG~~Y~G~~~~g~~~G~G~~~~~dG~~YeG~w~~G~~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~nG~~Y~  130 (538)
                      ++.++||++|+|+|.++++||.|++.|+||++|+|+|++|++||.|++.|++|.+|+|+|.+|++||.|++++++|.+|+
T Consensus         2 e~~~~nGd~Y~Ge~~~g~~hG~G~~~~~DG~~YeGew~~Gk~hG~G~~~~~nG~~YeGeF~nG~~hG~G~~~~~~G~~Ye   81 (765)
T PLN03185          2 ELVLSNGDFYSGSLLGNVPEGPGKYLWSDGCMYEGEWRRGMRHGNGKISWPSGATYEGEFSGGYMHGSGTYTGTDGTTYK   81 (765)
T ss_pred             eEEecCCCEEEEEEECCccccceEEEECCCCEEEEEEECCEeeCcEeEEeCCCCEEEEEEECCEEeceEEEEecCCCEEE
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeecceeeccceeeecCCCEEEEEEecceEeeeEEEEEcCCCEEEEEEeCCeEeeeEEEEecCCCEEEEEEECCeeeee
Q 009288          131 GSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGK  210 (538)
Q Consensus       131 G~~~~g~~~G~G~~~~~nG~~YeG~w~~g~~~G~G~~~~~nG~~Y~G~w~~G~~~G~G~~~~~nG~~yeG~w~~G~~~G~  210 (538)
                      |+|++|++||.|+++|+||++|+|+|++|+++|.|+|.|+||.+|+|+|++|++||.|+++|+||++|+|+|.+|++||.
T Consensus        82 G~w~~gkkhG~G~~~y~nG~vYeG~wk~G~~~G~G~y~~~nG~~Y~Gefk~Gk~~G~G~l~~~nG~~YeG~w~nG~~hG~  161 (765)
T PLN03185         82 GRWRLNLKHGLGYQRYPNGDVFEGSWIQGLQEGPGKYTWANGNVYLGDMKGGKMSGKGTLTWVSGDSYEGQWLDGMMHGF  161 (765)
T ss_pred             EEEeCCcccceeEEEEecchhhhhhhhcCceecceeeeccCCCeEEEEecCCEEecCEEEEEeCCCeEEEEEeCCcceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCCcccC-------CcccceEecCccccCCCC--CCCC------C-----------------------------
Q 009288          211 GVFTWSNHENMKN-------DERDNFEVMGARKRSSSA--DPAR------P-----------------------------  246 (538)
Q Consensus       211 G~~~~~dG~~y~~-------~~kg~~~~~g~~~~~~~~--~~~~------~-----------------------------  246 (538)
                      |+|+|+||.+|.+       +++|+|++.|...+....  ...+      +                             
T Consensus       162 G~y~~~DG~~Y~G~W~~G~~~G~G~~y~~G~~~p~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (765)
T PLN03185        162 GVYTWSDGGCYVGTWTRGLKDGKGVFYPAGSRVPAVQEFYLNALRKRGVLPDLRRQNQVLSSHNSEQLSRGVSSDKLSKG  241 (765)
T ss_pred             EEEEECCCCEEEEEeeCCceEeEEEEEECCCcccccchhhhhcccccccccchhhccccccccccccccccccccccccc
Confidence            9999999999943       456999998764221110  0000      0                             


Q ss_pred             ce---------ee-----eccCCCCCC-ccchhc---chhhHhhhhhc-------ccCCCCCCCCCcc-----------c
Q 009288          247 RI---------YI-----WELDGEAGD-ITCDIV---DKAEAASMLYK-------NQFGGPPNGIGQF-----------Q  290 (538)
Q Consensus       247 ~~---------~~-----~~~~~~~~~-~~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~~-----------~  290 (538)
                      ++         ..     |.++.+..+ ++.+.+   ..++. .+++.       ..++|+++||+..           .
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (765)
T PLN03185        242 SLLPLEQSRNRNVSLERRWSLEVSIEKVIGHDYSGSSSAVLD-EGSEVEYKANRPILEREYMQGVLISELVLNNSFSSTS  320 (765)
T ss_pred             ccccccccccccccccccccccCcccceeccccccccccccc-chhhccccccccccchhhhcceeeeeeecccccchhc
Confidence            00         00     110111111 111100   00000 00000       0124677787311           1


Q ss_pred             cCCCCCC---CCcccCCCcEEecCCCcHHHHHHHHHHHHhhhcCC-CcccccCCcccCCCceeeEeeCCCCCCCCCCCCc
Q 009288          291 KSPCSSA---DGEVKKPGHTISKGHKNYDLMLNLQLGIRHSVGKH-ASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQ  366 (538)
Q Consensus       291 ~~~~~~~---~~~~~~~g~~i~~gh~~~~l~~~~~~Gi~~~i~~~-~~~~~~l~~~df~~~~k~~~~f~~~~~~~~~~~~  366 (538)
                      ++++.+.   .++++++|++|++||++|+||++||||||+||+++ +.+.++|+++||++++|+++.||++|++.||+|+
T Consensus       321 ~~~~~~~~~~~~~~~~~g~~i~~gh~~~~l~~~~~~GIr~sv~~~~~~~~~~l~~~DF~~~~~~~~~fp~~gs~~tp~h~  400 (765)
T PLN03185        321 RRAKRRQKKLVKEIKRPGETIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRPSDFGPRASFWMNFPKAGSQLTPSHQ  400 (765)
T ss_pred             cccccccccchhhhcCCCcEEecCcCcHHHHHHHHHhHHHHhccccccCCccCChhhCcceEEEEEEcCcccCccCCCCc
Confidence            2332222   36789999999999999999999999999999999 5567799999999999999999999999999999


Q ss_pred             cCCeEEEEcCHHHHHHHHHHhCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHH
Q 009288          367 SMDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYY  446 (538)
Q Consensus       367 ~~~f~~k~y~P~~F~~lR~~~~i~~~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~  446 (538)
                      +.+|+||||||+|||+||++|||+++||+.|||++.+|+|++|+|||||+||+|+|+|||||||+++|+++|++|||.||
T Consensus       401 ~~~fkfkdY~P~vFr~LR~~fgId~~dyl~Sl~~~~~l~el~S~GKSGS~Fy~S~D~rFiIKTI~k~E~~~l~~iLp~Y~  480 (765)
T PLN03185        401 SEDFKWKDYCPMVFRNLREMFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRKSEVKVLLRMLPDYH  480 (765)
T ss_pred             cCceEEEEECHHHHHHHHHHhCCCHHHHHHhccCCccchhccCCCCcCCeEEEecCCcEEEEecCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeeeccCCCceeeEEEeeccCcCCccCCCccccCCCCcEeeCCCcccc
Q 009288          447 QHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVF  526 (538)
Q Consensus       447 ~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKD~d~~~~~  526 (538)
                      +||..||+|||+||||||+|++.+++++|||||+|||+++..||++||||||+++|.+++.  +.++.+||||+||+..|
T Consensus       481 ~hv~~n~~TLL~kf~Gl~~i~~~~g~k~~fvVM~NlF~~~~~I~~~yDLKGSt~~R~~~k~--~~~~~~tlKDlD~~~~~  558 (765)
T PLN03185        481 HHVKTYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSADKV--EIDENTTLKDLDLNYSF  558 (765)
T ss_pred             HHHhhCCCcchhhheEEEEEEeCCCcEEEEEEEecCCCCCCccceEEECCCCCCCCCCccc--cccCCCeeeecCcCceE
Confidence            9999999999999999999998888999999999999999999999999999999999763  45678999999999999


Q ss_pred             cCCHHHHHHHhC
Q 009288          527 RLDRSWFQELIR  538 (538)
Q Consensus       527 ~~~~~~~~~~~~  538 (538)
                      ++++.++++|++
T Consensus       559 ~l~~~~k~~l~~  570 (765)
T PLN03185        559 YLEPSWRDALLR  570 (765)
T ss_pred             eeCHHHHHHHHH
Confidence            999999998873

>KOG0229 consensus Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]	Back alignment and domain information

>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate	Back alignment and domain information

>smart00330 PIPKc Phosphatidylinositol phosphate kinases	Back alignment and domain information

>PLN03185 phosphatidylinositol phosphate kinase; Provisional	Back alignment and domain information

>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]	Back alignment and domain information

>PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in []	Back alignment and domain information

>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]	Back alignment and domain information

>COG4642 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>COG4642 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>KOG0231 consensus Junctional membrane complex protein Junctophilin and related MORN repeat proteins [General function prediction only]	Back alignment and domain information

>KOG0231 consensus Junctional membrane complex protein Junctophilin and related MORN repeat proteins [General function prediction only]	Back alignment and domain information

>COG2849 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>COG2849 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>smart00698 MORN Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases	Back alignment and domain information

>PF02493 MORN: MORN repeat; InterPro: IPR003409 The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins ()	Back alignment and domain information

>smart00698 MORN Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases	Back alignment and domain information

>PF02493 MORN: MORN repeat; InterPro: IPR003409 The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins ()	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		538
1bo1_A		416	Phosphatidylinositol Phosphate Kinase Type Ii Beta		3e-21
2ybx_A		394	Crystal Structure Of Human Phosphatidylinositol-5-P		4e-20
2gk9_A		392	Human Phosphatidylinositol-4-Phosphate 5-Kinase, Ty		4e-16

>pdb|1BO1|A Chain A, Phosphatidylinositol Phosphate Kinase Type Ii Beta Length = 416

Back alignment and structure

Iteration: 1

Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 9/185 (4%) Query: 321 LQLGIRHSVGK--HASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPM 378 L G+ H++ + + V L DF K +++ + F + F++K+YCPM Sbjct: 46 LMWGVNHTINELSNVPVPVMLMPDDF----KAYSKIKVDNHLFNKENLPSRFKFKEYCPM 101 Query: 379 VFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVL 438 VFR+LRE F ID DY ++ + S G+ G+ F T D RF+IKTV +V + Sbjct: 102 VFRNLRERFGIDDQDYQNSVTRSAPINS-DSQGRCGTRFLTTYDRRFVIKTVSSEDVAEM 160 Query: 439 IRMLPSYYQHVCQ-YKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKG 497 +L Y+Q + + + NTL+ +F G++ + V G +T +V N+F +HR++DLKG Sbjct: 161 HNILKKYHQFIVECHGNTLLPQFLGMYRLT-VDGVETYMVVTRNVFSHRLTVHRKYDLKG 219 Query: 498 SSYGR 502 S+ R Sbjct: 220 STVAR 224

PyMOL of 1bo1

>pdb|2YBX|A Chain A, Crystal Structure Of Human Phosphatidylinositol-5-Phosphate 4-Kinase Type-2 Alpha Length = 394

Back alignment and structure

>pdb|2GK9|A Chain A, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii, Gamma Length = 392

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		538
2ybx_A		394	Phosphatidylinositol-5-phosphate 4-kinase type-2;	1e-71
2gk9_A		392	Phosphatidylinositol-4-phosphate 5-kinase, type II	4e-67
1h3i_A		293	Histone H3 lysine 4 specific methyltransferase; 2.	2e-38
1h3i_A		293	Histone H3 lysine 4 specific methyltransferase; 2.	6e-38
1h3i_A		293	Histone H3 lysine 4 specific methyltransferase; 2.	6e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04

>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394	Back alignment and structure

 Score =  233 bits (594), Expect = 1e-71
 Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 14/244 (5%)

Query: 301 VKKPGHTISKGHKNYDLMLNLQLGIRHSVGKHASVM--RELRQSDFEPKEKFWTRFPPEG 358
           V      +        L+  L  G+ HS+ + + V     L   DF+   K       + 
Sbjct: 11  VDLGTENLYFQS-MDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKV----DN 65

Query: 359 SKFTPPHQSMDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFY 418
             F   +    F++K+YCPMVFR+LRE F ID  D+  ++          S  +SG+ F+
Sbjct: 66  HLFNKENMPSHFKFKEYCPMVFRNLRERFGIDDQDFQNSLTRSA-PLPNDSQARSGARFH 124

Query: 419 LTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQ-YKNTLVTKFFGVHCVKPVGGQKTRFI 477
            + D R++IKT+   +V  +  +L  Y+Q++ + +  TL+ +F G++ +  V G +   I
Sbjct: 125 TSYDKRYIIKTITSEDVAEMHNILKKYHQYIVECHGITLLPQFLGMYRLN-VDGVEIYVI 183

Query: 478 VMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLD---LDFVFRLDRSWFQ 534
           V  N+F     ++R++DLKGS+  R     +E+  E  TLKD D         +D +  +
Sbjct: 184 VTRNVFSHRLSVYRKYDLKGSTVAREA-SDKEKAKELPTLKDNDFINEGQKIYIDDNNKK 242

Query: 535 ELIR 538
             + 
Sbjct: 243 VFLE 246

PyMOL of 2ybx

>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392	Back alignment and structure

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Length = 293	Back alignment and structure

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Length = 293	Back alignment and structure

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Length = 293	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		538
2ybx_A		394	Phosphatidylinositol-5-phosphate 4-kinase type-2;	100.0
2gk9_A		392	Phosphatidylinositol-4-phosphate 5-kinase, type II	100.0
1h3i_A		293	Histone H3 lysine 4 specific methyltransferase; 2.	99.94
1h3i_A		293	Histone H3 lysine 4 specific methyltransferase; 2.	99.94
2f69_A		261	Histone-lysine N-methyltransferase, H3 lysine-4 sp	98.87
2f69_A		261	Histone-lysine N-methyltransferase, H3 lysine-4 sp	98.86
2aqx_A		289	Predicted: inositol 1,4,5-trisphosphate 3-kinase;	83.44

>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A	Back alignment and structure

Probab=100.00  E-value=1.1e-55  Score=464.11  Aligned_cols=225  Identities=30%  Similarity=0.449  Sum_probs=193.7

Q ss_pred             CCCcEEecCCCcHHHHHHHHHHHHhhhcCC--CcccccCCcccCCCceeeEee---CCCCCCCCCCCCccCCeEEEEcCH
Q 009288          303 KPGHTISKGHKNYDLMLNLQLGIRHSVGKH--ASVMRELRQSDFEPKEKFWTR---FPPEGSKFTPPHQSMDFRWKDYCP  377 (538)
Q Consensus       303 ~~g~~i~~gh~~~~l~~~~~~Gi~~~i~~~--~~~~~~l~~~df~~~~k~~~~---f~~~~~~~~~~~~~~~f~~k~y~P  377 (538)
                      -.|++++..+.++.||.+||||||+||+++  .+++.+|+++||++++|+++.   |+++   .+|    .+|+|++|||
T Consensus        12 ~~~~~~~~~r~~~~l~~~~~~Gi~~~v~~~~~~~~~~~L~~~df~~~~k~~~~~~~f~~~---~~p----~~f~~k~Y~P   84 (394)
T 2ybx_A           12 DLGTENLYFQSMDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKE---NMP----SHFKFKEYCP   84 (394)
T ss_dssp             -----CCCCCCSSHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGGCEEEEEEEEESSSTT---TSC----SEEEEEEESH
T ss_pred             CCCCcccccccchHHHHHHHHhHHHHHhhccCCCCccccChhHhhhheEEecccccCCcc---cCC----CCeEEEEECH
Confidence            457888999999999999999999999998  445667899999999999874   6655   344    4799999999


Q ss_pred             HHHHHHHHHhCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHHHhh-cCCCce
Q 009288          378 MVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVC-QYKNTL  456 (538)
Q Consensus       378 ~~F~~lR~~~~i~~~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~-~~~~tL  456 (538)
                      .+|++||++|||++++|+.|||++.++. +.|+|||||+||+|.|+|||||||+++|+++|+++||.||+||. +||+||
T Consensus        85 ~~F~~LR~~~~i~~~dy~~Sl~~~~~~~-~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~~~~TL  163 (394)
T 2ybx_A           85 MVFRNLRERFGIDDQDFQNSLTRSAPLP-NDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYHQYIVECHGITL  163 (394)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHHSSCCEE-CC-----CCCEEECTTSSEEEEEECHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             HHHHHHHHHhCCCHHHHHHHhcCCCccc-cCCCCCccCEEEEeCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhcCCCcC
Confidence            9999999999999999999999887754 78999999999999999999999999999999999999999995 699999


Q ss_pred             eEeeEeeEEEEecCCeEEEEEEEeeeccCCCceeeEEEeeccCcCCccCCCccccCCCCcEeeCCC---cccccCCHHHH
Q 009288          457 VTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDL---DFVFRLDRSWF  533 (538)
Q Consensus       457 L~k~~Gl~~i~~~~~~~~~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKD~d~---~~~~~~~~~~~  533 (538)
                      |+||||||+|++. ++++|||||+|||++...||++||||||+++|.+++++ ..+..+||||+||   ...+++.+.++
T Consensus       164 L~k~~Gly~v~~~-~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~~LkD~df~~~~~~i~l~~~~k  241 (394)
T 2ybx_A          164 LPQFLGMYRLNVD-GVEIYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDKE-KAKELPTLKDNDFINEGQKIYIDDNNK  241 (394)
T ss_dssp             SCCEEEEEEEEET-TEEEEEEEEECSSCSSSCCSEEEEECCSSSCCCCCHHH-HTSSSCEECHHHHHHTTCCCCCCHHHH
T ss_pred             hhhhcEEEEEEEC-CeEEEEEEEecCCCCCcceeeeeeecccccCCccCccc-cccCcceecccchHhcCCeEEECHHHH
Confidence            9999999999975 58999999999999988999999999999999997643 3456789999999   45799999998


Q ss_pred             HHHh
Q 009288          534 QELI  537 (538)
Q Consensus       534 ~~~~  537 (538)
                      +.|+
T Consensus       242 ~~l~  245 (394)
T 2ybx_A          242 KVFL  245 (394)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8886

PyMOL of 2ybx

>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens}	Back alignment and structure

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A	Back alignment and structure

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A	Back alignment and structure

>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*	Back alignment and structure

>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*	Back alignment and structure

>2aqx_A Predicted: inositol 1,4,5-trisphosphate 3-kinase; IP3K, ITPKB, IP3-3K, IP3-3KB, IP3, calmodu binding, transferase; HET: ATP; 2.50A {Mus musculus}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		538
d1bo1a_		383	d.143.1.2 (A:) Phosphatidylinositol phosphate kina	2e-77

>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: SAICAR synthase-like
superfamily: SAICAR synthase-like
family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  247 bits (631), Expect = 2e-77
 Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 13/231 (5%)

Query: 314 NYDLMLNLQLGIRHSVGKHASVM--RELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFR 371
           +  ++  L  G+ H++ + ++V     L   DF    K +++   +   F   +    F+
Sbjct: 6   SEPILSVLMWGVNHTINELSNVPVPVMLMPDDF----KAYSKIKVDNHLFNKENLPSRFK 61

Query: 372 WKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVK 431
           +K+YCPMVFR+LRE F ID  DY  ++          S G+ G+ F  T D RF+IKTV 
Sbjct: 62  FKEYCPMVFRNLRERFGIDDQDYQNSVTRSA-PINSDSQGRCGTRFLTTYDRRFVIKTVS 120

Query: 432 KSEVKVLIRMLPSYYQHVCQ-YKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIH 490
             +V  +  +L  Y+Q + + + NTL+ +F G++ +  V G +T  +V  N+F     +H
Sbjct: 121 SEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLT-VDGVETYMVVTRNVFSHRLTVH 179

Query: 491 RRFDLKGSSYGRITDKPEEEIDETTTLKDLDL---DFVFRLDRSWFQELIR 538
           R++DLKGS+  R     +E+  +  T KD D         +     +  + 
Sbjct: 180 RKYDLKGSTVAREA-SDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLE 229

PyMOL of d1bo1a_

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		538
d1bo1a_		383	Phosphatidylinositol phosphate kinase IIbeta, PIPK	100.0

>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: SAICAR synthase-like
superfamily: SAICAR synthase-like
family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-57  Score=472.97  Aligned_cols=217  Identities=30%  Similarity=0.520  Sum_probs=191.3

Q ss_pred             cHHHHHHHHHHHHhhhcCC--CcccccCCcccCCCceeeEeeCCCCCCCCCCCCccCCeEEEEcCHHHHHHHHHHhCCCh
Q 009288          314 NYDLMLNLQLGIRHSVGKH--ASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFRHLRELFAIDP  391 (538)
Q Consensus       314 ~~~l~~~~~~Gi~~~i~~~--~~~~~~l~~~df~~~~k~~~~f~~~~~~~~~~~~~~~f~~k~y~P~~F~~lR~~~~i~~  391 (538)
                      +.+||.+||||||+||+++  .+.++.|+|+||++..++.+    +|+..+|+|..++|+||||||.||++||++|||++
T Consensus         6 ~~~l~~~~~~Gi~~sv~~l~~~~~~~~L~~~dF~~~~k~~~----~~~~~~~~~~~~~fkfk~Y~P~vF~~lR~~fgi~~   81 (383)
T d1bo1a_           6 SEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKV----DNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDD   81 (383)
T ss_dssp             SSHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGTCEEEEEE----ECBSSSCSSSCSEEEEEEECHHHHHHHHHHTTCCH
T ss_pred             chHHHHHHHHhHHHHHHhhcCCCcchhcCcccceeeEEEec----CCCCCCcCCCCCCeEEEEeCHHHHHHHHHHcCCCH
Confidence            4799999999999999998  34556699999999887653    57778888888999999999999999999999999


Q ss_pred             HHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHHHhh-cCCCceeEeeEeeEEEEecC
Q 009288          392 ADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVC-QYKNTLVTKFFGVHCVKPVG  470 (538)
Q Consensus       392 ~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~-~~~~tLL~k~~Gl~~i~~~~  470 (538)
                      +||+.|||++..+ +..|+|||||+||+|+|+|||||||+++|+++|+++||.||+||. +||+||||||||||+|++ +
T Consensus        82 ~dy~~Sl~~~~~~-~~~s~GkSGs~F~~t~D~rfiiKti~~~E~~~l~~~l~~Y~~h~~~~n~~TLL~k~~Gly~i~~-~  159 (383)
T d1bo1a_          82 QDYQNSVTRSAPI-NSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTV-D  159 (383)
T ss_dssp             HHHHHHHHSSCCE-ECCCC----CCEEECTTSSEEEECCCHHHHHHHHHHHHHHHHHHHTTTTCCSSCCEEEEEEEEE-T
T ss_pred             HHHHHHhCCCccc-cccccCCcCCeEEEecCCcEEEEEeCHHHHHHHHHHHHHHHHHHHhcCCCcCHHhhheeeEEEe-C
Confidence            9999999987655 457899999999999999999999999999999999999999995 599999999999999996 4


Q ss_pred             CeEEEEEEEeeeccCCCceeeEEEeeccCcCCccCCCccccCCCCcEeeCCC---cccccCCHHHHHHHh
Q 009288          471 GQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDL---DFVFRLDRSWFQELI  537 (538)
Q Consensus       471 ~~~~~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKD~d~---~~~~~~~~~~~~~~~  537 (538)
                      +.++|||||+|||++...||++||||||+++|.+++.+ ..++.+||||+||   +..+++.+..++.|+
T Consensus       160 ~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~~lKD~df~~~~~~i~l~~~~k~~l~  228 (383)
T d1bo1a_         160 GVETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKE-KAKDLPTFKDNDFLNEGQKLHVGEESKKNFL  228 (383)
T ss_dssp             TEEEEEEEEECSSCSSSCCSEEEEECCCSSSSCSCSGG-GSSSCCEECHHHHHHTTCCCCCCSSHHHHHH
T ss_pred             CceEEEEEEeccccCCcccceeEeccCcccccCcCccc-ccccchhhhhHHHHhccCCeeeCHHHHHHHH
Confidence            59999999999999999999999999999999997754 4467899999998   556888888887775

PyMOL of d1bo1a_