Citrus Sinensis ID: 009392

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-----
MDSWVRLLLLVACLFPALVECRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXXXXXAQIIQEYGLCIAIWKYTQHGD
cHHHHHHHHHHHHHHcccccccEEEEEEEEEEEEcccccccccEEEEcccccccEEEEEEccEEEEEEEEcccccEEEEEcccccccccccccccccccccccccccEEEEEEEcccccEEEEccccccccccccEEEEEEcccccccccccccccEEEEEcccccccHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEcccEEEEEEEEEcccccEEEEEcccEEEEEEEccEEcccEEEcEEEEccccEEEEEEEEcccccccEEEEEEccccccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccEEEEEEccccccccccHHHHHHHccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEEccccccccccccccccccEEEEEEcccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccEEEEEEEEEEccc
cHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEcccEEccccccEEEEcccccccEEEEEcccEEEEEEEEcccccEcEEEEcccccccHHHcccEcccEccEccccEEEEEEccccccEEEEEEEccHHHHHHHcccEEEEcccccccccccccccEEEEEEccccccHHHHHHHHHHccccccccccEEEcccccccccccccccEEEEEcccHHHHHHHHHHHHcHHHHHHHccccEEEEEEEEEEEccccEEEEEEcccccEEEEEEcccccccEEEEEEEcccccccccccEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccEEEEEEEcccccccccccccccEEEEEEcccEEccccHHHHHHHHccccccccccccccccccEcccccccccccccccEEEEEEcccEEEEEEEcccEEEcccccEEEcccEEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccEEEEEEEccccc
MDSWVRLLLLVACLFPALVECRVRHYKFNVvmknstklcsskpivtvnrkfpgptlyarehDTVLVKVVNHVKYNVTIHWHGVRqlrtgwadgpayitqcpiqsghsyvynftitgqRGTLLWHAHILWLRATVHGAIvilpkrgvpypfpkphKEVVVVLAEWWKSDTEAVINQALqsglapnvsdshtingqpgpisscssqggftlpvdsgkTYMLRIINAALNEELFFKIAGHKLTVVEVDatyvkpfktdniviapgqttnVLLSADKTSGKYLvaaspfmdapiavdnVTATATLHYsgtlassattltstppkngtAIANKFIDSLRslnskkypakvpqtvdhnllftvglgvnpcpsckagngsrvVASINNVTFVMPTIALLQAHFFNisgvfttdfpgnpphtynftgtpknlqtsngtkAYRLAYNSTVQLILQdtgiiapenhpvhlhgfnffavgkglgnfnpkkdpkkfnlvdpverntigvpsggWVAIRXXXXXXXXAQIIQEYGLCIAIWKYTQHGD
MDSWVRLLLLVACLFPALVECRVRHYKFnvvmknstklcsskpivtvnrkfpgptlyAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKrgvpypfpKPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQpgpisscssqgGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFktdniviapgqtTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLassattltstppknGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKfnlvdpverntigvpsggwVAIRXXXXXXXXAQIIQEYGLCIAIWKYTQHGD
MDSWVRllllvaclfpalvECRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGtlassattltstPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGnfnpkkdpkkfnLVDPVERNTIGVPSGGWVAIrxxxxxxxxAQIIQEYGLCIAIWKYTQHGD
***WVRLLLLVACLFPALVECRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQAL****************************GFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLA***************AIANKFIDSLRSLN*KKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXXXXXAQIIQEYGLCIAIWKYT****
*DSWVRLLLLVACLFPALVECRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGT**********TPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIR********AQIIQEYGLCIAIWKY*****
MDSWVRLLLLVACLFPALVECRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXXXXXAQIIQEYGLCIAIWKYTQHGD
MDSWVRLLLLVACLFPALVECRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXXXXXAQIIQEYGLCIAIWKYTQ***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDSWVRLLLLVACLFPALVECRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXXXXXAQIIQEYGLCIAIWKYTQHGD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query535 2.2.26 [Sep-21-2011]
O80434558 Laccase-4 OS=Arabidopsis yes no 0.938 0.899 0.757 0.0
Q0IQU1564 Laccase-22 OS=Oryza sativ yes no 0.934 0.886 0.716 0.0
Q6ID18558 Laccase-10 OS=Arabidopsis no no 0.938 0.899 0.718 0.0
Q1PDH6566 Laccase-16 OS=Arabidopsis no no 0.932 0.881 0.690 0.0
Q8VZA1557 Laccase-11 OS=Arabidopsis no no 0.925 0.888 0.587 1e-179
Q8RYM9562 Laccase-2 OS=Oryza sativa yes no 0.900 0.857 0.596 1e-177
Q5N9X2579 Laccase-4 OS=Oryza sativa yes no 0.902 0.834 0.58 1e-168
Q0DHL2574 Laccase-12/13 OS=Oryza sa no no 0.942 0.878 0.575 1e-167
Q9FJD5577 Laccase-17 OS=Arabidopsis no no 0.934 0.866 0.552 1e-163
O81081573 Laccase-2 OS=Arabidopsis no no 0.945 0.883 0.540 1e-160
>sp|O80434|LAC4_ARATH Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2 Back     alignment and function desciption
 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/504 (75%), Positives = 436/504 (86%), Gaps = 2/504 (0%)

Query: 4   WVRLLLLVACLFPALVECRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDT 63
           W   L+    +FPA  E  VRHYKFNVVMKN T+LCSSKP VTVN ++PGPT+YARE DT
Sbjct: 7   WFLFLVSFFSVFPAPSESMVRHYKFNVVMKNVTRLCSSKPTVTVNGRYPGPTIYAREDDT 66

Query: 64  VLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLW 123
           +L+KVVNHVKYNV+IHWHGVRQ+RTGWADGPAYITQCPIQ G  Y YN+T+TGQRGTL W
Sbjct: 67  LLIKVVNHVKYNVSIHWHGVRQVRTGWADGPAYITQCPIQPGQVYTYNYTLTGQRGTLWW 126

Query: 124 HAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAP 183
           HAHILWLRATV+GA+VILPKRGVPYPFPKP  E V+VL EWWKSDTE +IN+AL+SGLAP
Sbjct: 127 HAHILWLRATVYGALVILPKRGVPYPFPKPDNEKVIVLGEWWKSDTENIINEALKSGLAP 186

Query: 184 NVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVE 243
           NVSDSH ING PGP+ +C SQG + L V++GKTY+LR++NAALNEELFFK+AGH  TVVE
Sbjct: 187 NVSDSHMINGHPGPVRNCPSQG-YKLSVENGKTYLLRLVNAALNEELFFKVAGHIFTVVE 245

Query: 244 VDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHY 303
           VDA YVKPFKTD ++IAPGQTTNVLL+A K++GKYLV ASPFMDAPIAVDNVTATAT+HY
Sbjct: 246 VDAVYVKPFKTDTVLIAPGQTTNVLLTASKSAGKYLVTASPFMDAPIAVDNVTATATVHY 305

Query: 304 SGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNP 363
           SGTL+SS T LT  PP+N T+IAN F +SLRSLNSKKYPA VP T+DH+L FTVGLG+N 
Sbjct: 306 SGTLSSSPTILTLPPPQNATSIANNFTNSLRSLNSKKYPALVPTTIDHHLFFTVGLGLNA 365

Query: 364 CPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFT-GTPK 422
           CP+CKAGNGSRVVASINNVTF+MP  ALL AH+FN SGVFTTDFP NPPH +N++ G+  
Sbjct: 366 CPTCKAGNGSRVVASINNVTFIMPKTALLPAHYFNTSGVFTTDFPKNPPHVFNYSGGSVT 425

Query: 423 NLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPK 482
           N+ T  GT+ Y+L YN+TVQL+LQDTG+IAPENHPVHLHGFNFF VG+GLGNFN  KDPK
Sbjct: 426 NMATETGTRLYKLPYNATVQLVLQDTGVIAPENHPVHLHGFNFFEVGRGLGNFNSTKDPK 485

Query: 483 KFNLVDPVERNTIGVPSGGWVAIR 506
            FNLVDPVERNTIGVPSGGWV IR
Sbjct: 486 NFNLVDPVERNTIGVPSGGWVVIR 509
Lignin degradation and detoxification of lignin-derived products (By similarity). Required for secondary xylem cell wall lignification.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: 2
>sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 Back     alignment and function description
>sp|Q6ID18|LAC10_ARATH Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 SV=1 Back     alignment and function description
>sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2 Back     alignment and function description
>sp|Q8VZA1|LAC11_ARATH Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1 Back     alignment and function description
>sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1 Back     alignment and function description
>sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1 Back     alignment and function description
>sp|Q0DHL2|LAC12_ORYSJ Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1 Back     alignment and function description
>sp|O81081|LAC2_ARATH Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query535
224139024557 laccase 1a [Populus trichocarpa] gi|2228 0.942 0.904 0.847 0.0
224139028557 laccase 1b [Populus trichocarpa] gi|2228 0.942 0.904 0.841 0.0
224087702550 laccase 1d [Populus trichocarpa] gi|2228 0.934 0.909 0.842 0.0
224087694560 laccase 1c [Populus trichocarpa] gi|2228 0.940 0.898 0.839 0.0
1685087557 diphenol oxidase [Nicotiana tabacum] 0.945 0.908 0.812 0.0
255558804556 laccase, putative [Ricinus communis] gi| 0.936 0.901 0.827 0.0
225440626556 PREDICTED: laccase-4 [Vitis vinifera] gi 0.942 0.906 0.813 0.0
255586507556 laccase, putative [Ricinus communis] gi| 0.945 0.910 0.788 0.0
449460379556 PREDICTED: laccase-4-like [Cucumis sativ 0.945 0.910 0.808 0.0
224106309556 predicted protein [Populus trichocarpa] 0.942 0.906 0.802 0.0
>gi|224139024|ref|XP_002322961.1| laccase 1a [Populus trichocarpa] gi|222867591|gb|EEF04722.1| laccase 1a [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  900 bits (2325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/505 (84%), Positives = 469/505 (92%), Gaps = 1/505 (0%)

Query: 3   SWVRLLLLVACLFPALVECRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHD 62
           S  R +LL  CLFPA+VECR+RHYKFNVVMKN+T+LCSSKPIVTVN  FPGPTLYARE D
Sbjct: 4   SCFRFMLLAVCLFPAVVECRIRHYKFNVVMKNTTRLCSSKPIVTVNGLFPGPTLYAREDD 63

Query: 63  TVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLL 122
           TVLVKVVN VKYN++IHWHG+RQLRTGWADGPAYITQCPIQ G SYVYNFTITGQRGTLL
Sbjct: 64  TVLVKVVNRVKYNLSIHWHGIRQLRTGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLL 123

Query: 123 WHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLA 182
           WHAHILWLRATVHGAIV+LPK GVPYPFP PHKEVVVVLAEWWKSDTEAVIN+AL+SGLA
Sbjct: 124 WHAHILWLRATVHGAIVVLPKLGVPYPFPAPHKEVVVVLAEWWKSDTEAVINEALKSGLA 183

Query: 183 PNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVV 242
           PNVSD+HTING PG +S+CSSQGGFTLPV SGKTYMLR+INAALNEELFFKIAGHKLTVV
Sbjct: 184 PNVSDAHTINGHPGAVSTCSSQGGFTLPVQSGKTYMLRLINAALNEELFFKIAGHKLTVV 243

Query: 243 EVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLH 302
           EVDATYVKPFKTD ++IAPGQTTNVL++ +K +GKYLVAASPFMDAPIAVDN+TATATLH
Sbjct: 244 EVDATYVKPFKTDTVLIAPGQTTNVLVTTNKNTGKYLVAASPFMDAPIAVDNMTATATLH 303

Query: 303 YSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVN 362
           YSG L++S TTLT  PPKN TAIAN+F +SLRSLNSK +PAKVP TVDH+L FTVGLG+N
Sbjct: 304 YSGALSNSPTTLTIPPPKNATAIANQFTNSLRSLNSKTFPAKVPLTVDHSLFFTVGLGIN 363

Query: 363 PCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGT-P 421
           PCP+CKAGNGSRVVASINNVTFVMPT ALLQAHFFNISGVFTTDFP  PPH +N+TGT P
Sbjct: 364 PCPTCKAGNGSRVVASINNVTFVMPTTALLQAHFFNISGVFTTDFPAKPPHVFNYTGTPP 423

Query: 422 KNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDP 481
            NLQT++GTKAYRL YNSTVQL++QDTGII+PENHP+HLHGFNFFAVG+G+GN+NPK DP
Sbjct: 424 TNLQTTSGTKAYRLPYNSTVQLVMQDTGIISPENHPIHLHGFNFFAVGRGVGNYNPKTDP 483

Query: 482 KKFNLVDPVERNTIGVPSGGWVAIR 506
           KKFNLVDPVERNTIGVPSGGWVAIR
Sbjct: 484 KKFNLVDPVERNTIGVPSGGWVAIR 508

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224139028|ref|XP_002322962.1| laccase 1b [Populus trichocarpa] gi|222867592|gb|EEF04723.1| laccase 1b [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224087702|ref|XP_002308209.1| laccase 1d [Populus trichocarpa] gi|222854185|gb|EEE91732.1| laccase 1d [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224087694|ref|XP_002308208.1| laccase 1c [Populus trichocarpa] gi|222854184|gb|EEE91731.1| laccase 1c [Populus trichocarpa] Back     alignment and taxonomy information
>gi|1685087|gb|AAC49536.1| diphenol oxidase [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|255558804|ref|XP_002520425.1| laccase, putative [Ricinus communis] gi|223540267|gb|EEF41838.1| laccase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225440626|ref|XP_002278638.1| PREDICTED: laccase-4 [Vitis vinifera] gi|297740241|emb|CBI30423.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255586507|ref|XP_002533894.1| laccase, putative [Ricinus communis] gi|223526158|gb|EEF28494.1| laccase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449460379|ref|XP_004147923.1| PREDICTED: laccase-4-like [Cucumis sativus] gi|449516581|ref|XP_004165325.1| PREDICTED: laccase-4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224106309|ref|XP_002314124.1| predicted protein [Populus trichocarpa] gi|222850532|gb|EEE88079.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query535
TAIR|locus:2042842558 IRX12 "IRREGULAR XYLEM 12" [Ar 0.906 0.869 0.739 1.4e-204
TAIR|locus:2150139558 LAC10 "laccase 10" [Arabidopsi 0.902 0.865 0.701 2.5e-193
TAIR|locus:2154518566 LAC16 "laccase 16" [Arabidopsi 0.897 0.848 0.678 2.3e-181
TAIR|locus:2143563557 LAC11 "laccase 11" [Arabidopsi 0.904 0.868 0.567 7.5e-160
TAIR|locus:2066117573 LAC2 "laccase 2" [Arabidopsis 0.900 0.841 0.528 7.8e-142
TAIR|locus:2194110581 LAC1 "laccase 1" [Arabidopsis 0.635 0.585 0.477 8.7e-132
TAIR|locus:2153469565 LAC12 "laccase 12" [Arabidopsi 0.895 0.847 0.487 6.6e-129
TAIR|locus:2060879570 LAC3 "laccase 3" [Arabidopsis 0.889 0.835 0.476 2.1e-123
TAIR|locus:2182895569 LAC13 "laccase 13" [Arabidopsi 0.891 0.838 0.484 6.5e-122
TAIR|locus:2039944569 LAC6 "laccase 6" [Arabidopsis 0.889 0.836 0.437 1.3e-116
TAIR|locus:2042842 IRX12 "IRREGULAR XYLEM 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1979 (701.7 bits), Expect = 1.4e-204, P = 1.4e-204
 Identities = 360/487 (73%), Positives = 411/487 (84%)

Query:    20 ECRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIH 79
             E  VRHYKFNVVMKN T+LCSSKP VTVN ++PGPT+YARE DT+L+KVVNHVKYNV+IH
Sbjct:    23 ESMVRHYKFNVVMKNVTRLCSSKPTVTVNGRYPGPTIYAREDDTLLIKVVNHVKYNVSIH 82

Query:    80 WHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIV 139
             WHGVRQ+RTGWADGPAYITQCPIQ G  Y YN+T+TGQRGTL WHAHILWLRATV+GA+V
Sbjct:    83 WHGVRQVRTGWADGPAYITQCPIQPGQVYTYNYTLTGQRGTLWWHAHILWLRATVYGALV 142

Query:   140 ILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPIS 199
             ILPKRGVPYPFPKP  E V+VL EWWKSDTE +IN+AL+SGLAPNVSDSH ING PGP+ 
Sbjct:   143 ILPKRGVPYPFPKPDNEKVIVLGEWWKSDTENIINEALKSGLAPNVSDSHMINGHPGPVR 202

Query:   200 SCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVI 259
             +C SQG + L V++GKTY+LR++NAALNEELFFK+AGH  TVVEVDA YVKPFKTD ++I
Sbjct:   203 NCPSQG-YKLSVENGKTYLLRLVNAALNEELFFKVAGHIFTVVEVDAVYVKPFKTDTVLI 261

Query:   260 APGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGXXXXXXXXXXXXPP 319
             APGQTTNVLL+A K++GKYLV ASPFMDAPIAVDNVTATAT+HYSG            PP
Sbjct:   262 APGQTTNVLLTASKSAGKYLVTASPFMDAPIAVDNVTATATVHYSGTLSSSPTILTLPPP 321

Query:   320 KNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASI 379
             +N T+IAN F +SLRSLNSKKYPA VP T+DH+L FTVGLG+N CP+CKAGNGSRVVASI
Sbjct:   322 QNATSIANNFTNSLRSLNSKKYPALVPTTIDHHLFFTVGLGLNACPTCKAGNGSRVVASI 381

Query:   380 NNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTG-TPKNLQTSNGTKAYRLAYN 438
             NNVTF+MP  ALL AH+FN SGVFTTDFP NPPH +N++G +  N+ T  GT+ Y+L YN
Sbjct:   382 NNVTFIMPKTALLPAHYFNTSGVFTTDFPKNPPHVFNYSGGSVTNMATETGTRLYKLPYN 441

Query:   439 STVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGXXXXXXXXXXXXLVDPVERNTIGVP 498
             +TVQL+LQDTG+IAPENHPVHLHGFNFF VG+GLG            LVDPVERNTIGVP
Sbjct:   442 ATVQLVLQDTGVIAPENHPVHLHGFNFFEVGRGLGNFNSTKDPKNFNLVDPVERNTIGVP 501

Query:   499 SGGWVAI 505
             SGGWV I
Sbjct:   502 SGGWVVI 508
GO:0005507 "copper ion binding" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA;IMP
GO:0046274 "lignin catabolic process" evidence=IEA
GO:0048046 "apoplast" evidence=IEA
GO:0052716 "hydroquinone:oxygen oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009834 "secondary cell wall biogenesis" evidence=IMP
GO:0009809 "lignin biosynthetic process" evidence=IMP
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2150139 LAC10 "laccase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154518 LAC16 "laccase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143563 LAC11 "laccase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2066117 LAC2 "laccase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194110 LAC1 "laccase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153469 LAC12 "laccase 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060879 LAC3 "laccase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182895 LAC13 "laccase 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2039944 LAC6 "laccase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q0IQU1LAC22_ORYSJ1, ., 1, 0, ., 3, ., 20.71650.93450.8865yesno
Q8RYM9LAC2_ORYSJ1, ., 1, 0, ., 3, ., 20.59630.90090.8576yesno
O80434LAC4_ARATH1, ., 1, 0, ., 3, ., 20.75790.93830.8996yesno
Q5N9X2LAC4_ORYSJ1, ., 1, 0, ., 3, ., 20.580.90280.8341yesno
Q6ID18LAC10_ARATH1, ., 1, 0, ., 3, ., 20.71880.93830.8996nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.10.30.976
3rd Layer1.10.3.20.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
lac1
SubName- Full=Laccase; EC=1.10.3.2; Flags- Fragment; (557 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XVIII.3152.1
cellulose synthase (EC-2.4.1.12) (1041 aa)
      • 0.510
gw1.XV.2559.1
iron superoxide dismutase (EC-1.15.1.1); Destroys radicals which are normally produced within t [...] (223 aa)
      • 0.510
gw1.V.3253.1
iron superoxide dismutase (EC-1.15.1.1); Destroys radicals which are normally produced within t [...] (223 aa)
      • 0.510
grail3.0095006301
RecName- Full=Superoxide dismutase; EC=1.15.1.1;; Destroys radicals which are normally produced [...] (230 aa)
      • 0.510
fgenesh4_pg.C_LG_VI001789
cellulose synthase (EC-2.4.1.12) (1075 aa)
      • 0.510
eugene3.00040363
cellulose synthase (EC-2.4.1.12) (1015 aa)
      • 0.510
eugene3.00020623
cellulose synthase (EC-2.4.1.12) (1093 aa)
      • 0.510
eugene3.00002636
cellulose synthase (EC-2.4.1.12) (1043 aa)
      • 0.510
estExt_fgenesh4_pm.C_LG_XVIII0125
cellulose synthase (EC-2.4.1.12) (1084 aa)
      • 0.510
estExt_Genewise1_v1.C_LG_XIII3158
manganese superoxide dismutase (EC-1.15.1.1); Destroys radicals which are normally produced wit [...] (226 aa)
      • 0.510

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query535
TIGR03389539 TIGR03389, laccase, laccase, plant 0.0
TIGR03388541 TIGR03388, ascorbase, L-ascorbate oxidase, plant t 1e-83
PLN02604566 PLN02604, PLN02604, oxidoreductase 3e-79
PLN02191574 PLN02191, PLN02191, L-ascorbate oxidase 2e-58
pfam07732119 pfam07732, Cu-oxidase_3, Multicopper oxidase 6e-49
PLN02835539 PLN02835, PLN02835, oxidoreductase 2e-48
pfam00394146 pfam00394, Cu-oxidase, Multicopper oxidase 1e-45
PLN02991543 PLN02991, PLN02991, oxidoreductase 1e-45
PLN02354552 PLN02354, PLN02354, copper ion binding / oxidoredu 2e-45
PLN02168545 PLN02168, PLN02168, copper ion binding / pectinest 3e-44
PLN00044596 PLN00044, PLN00044, multi-copper oxidase-related p 1e-43
TIGR03390538 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu 7e-43
PLN02792536 PLN02792, PLN02792, oxidoreductase 5e-40
COG2132451 COG2132, SufI, Putative multicopper oxidases [Seco 1e-25
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 5e-23
pfam07731135 pfam07731, Cu-oxidase_2, Multicopper oxidase 9e-20
PRK10965523 PRK10965, PRK10965, multicopper oxidase; Provision 5e-04
>gnl|CDD|234194 TIGR03389, laccase, laccase, plant Back     alignment and domain information 
 Score =  864 bits (2235), Expect = 0.0
 Identities = 340/490 (69%), Positives = 394/490 (80%), Gaps = 4/490 (0%)

Query: 21  CRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHW 80
             VRHY F+V  KN T+LCS+K I+TVN KFPGPTLYARE DTV+V V N+V+YNVTIHW
Sbjct: 1   AEVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHW 60

Query: 81  HGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVI 140
           HGVRQLR GWADGPAYITQCPIQ G SYVYNFTITGQRGTL WHAHI WLRATV+GAIVI
Sbjct: 61  HGVRQLRNGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLWWHAHISWLRATVYGAIVI 120

Query: 141 LPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISS 200
           LPK GVPYPFPKP +EV ++L EWW +D EAVINQA Q+G APNVSD++TING PGP+ +
Sbjct: 121 LPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYN 180

Query: 201 CSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIA 260
           CSS+  F L V+ GKTY+LRIINAALN+ELFF IA H LTVVEVDATY KPFKT  IVI 
Sbjct: 181 CSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIG 240

Query: 261 PGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPK 320
           PGQTTNVLL+AD++ G+Y +AA P+MDAP A DN T TA L Y GT  S+   L + P  
Sbjct: 241 PGQTTNVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPAY 300

Query: 321 NGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCP--SCKAGNGSRVVAS 378
           N TA A  F + LRSLNS +YPA VP T+D  L FT+GLG++PCP  +C+  NG+R  AS
Sbjct: 301 NDTAAATNFSNKLRSLNSAQYPANVPVTIDRRLFFTIGLGLDPCPNNTCQGPNGTRFAAS 360

Query: 379 INNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGT--PKNLQTSNGTKAYRLA 436
           +NN++FVMPT ALLQAH+F ISGVFTTDFP NPP  +N+TGT  P NL T+NGTK  RL 
Sbjct: 361 MNNISFVMPTTALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLPNNLFTTNGTKVVRLK 420

Query: 437 YNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIG 496
           +NSTV+L+LQDT I+  ENHP+HLHG+NFF VG G GNF+PKKDP KFNLVDP ERNT+G
Sbjct: 421 FNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVDPPERNTVG 480

Query: 497 VPSGGWVAIR 506
           VP+GGW AIR
Sbjct: 481 VPTGGWAAIR 490

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539
>gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type Back     alignment and domain information
>gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase Back     alignment and domain information
>gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase Back     alignment and domain information
>gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase Back     alignment and domain information
>gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase Back     alignment and domain information
>gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase Back     alignment and domain information
>gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase Back     alignment and domain information
>gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type Back     alignment and domain information
>gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase Back     alignment and domain information
>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information
>gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|236810 PRK10965, PRK10965, multicopper oxidase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 535
TIGR03389539 laccase laccase, plant. Members of this protein fa 100.0
PLN00044596 multi-copper oxidase-related protein; Provisional 100.0
PLN02991543 oxidoreductase 100.0
PLN02354552 copper ion binding / oxidoreductase 100.0
PLN02792536 oxidoreductase 100.0
PLN02168545 copper ion binding / pectinesterase 100.0
PLN02835539 oxidoreductase 100.0
KOG1263563 consensus Multicopper oxidases [Secondary metaboli 100.0
PLN02191574 L-ascorbate oxidase 100.0
PLN02604566 oxidoreductase 100.0
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 100.0
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 100.0
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 100.0
PRK10965523 multicopper oxidase; Provisional 100.0
PRK10883471 FtsI repressor; Provisional 100.0
COG2132451 SufI Putative multicopper oxidases [Secondary meta 100.0
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 100.0
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 100.0
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 99.96
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 99.91
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 99.77
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 99.67
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 99.56
PRK10965523 multicopper oxidase; Provisional 99.45
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 99.44
PLN02835539 oxidoreductase 99.41
TIGR03389539 laccase laccase, plant. Members of this protein fa 99.36
PRK10883471 FtsI repressor; Provisional 99.33
COG2132451 SufI Putative multicopper oxidases [Secondary meta 99.22
PLN02168545 copper ion binding / pectinesterase 99.14
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 99.14
PLN02991543 oxidoreductase 99.1
PLN02354552 copper ion binding / oxidoreductase 99.1
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 99.1
PLN02604566 oxidoreductase 99.07
PLN02792536 oxidoreductase 99.04
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 98.91
PLN02191574 L-ascorbate oxidase 98.89
PLN00044596 multi-copper oxidase-related protein; Provisional 98.75
PRK02710119 plastocyanin; Provisional 98.74
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 98.36
KOG1263563 consensus Multicopper oxidases [Secondary metaboli 98.35
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 98.17
TIGR0265783 amicyanin amicyanin. Members of this family are am 98.06
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 97.97
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 97.93
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 97.86
PRK02888635 nitrous-oxide reductase; Validated 97.85
TIGR03094195 sulfo_cyanin sulfocyanin. Members of this family a 97.67
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 97.6
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 97.5
COG3794128 PetE Plastocyanin [Energy production and conversio 97.47
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 97.33
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 97.2
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 97.08
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 96.6
COG4454158 Uncharacterized copper-binding protein [Inorganic 96.19
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 95.8
PRK10378375 inactive ferrous ion transporter periplasmic prote 94.58
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 94.48
COG4454158 Uncharacterized copper-binding protein [Inorganic 94.34
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 93.75
PRK02888635 nitrous-oxide reductase; Validated 93.11
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 92.86
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 92.58
TIGR02695125 azurin azurin. Azurin is a blue copper-binding pro 91.98
PRK02710119 plastocyanin; Provisional 88.79
PF1269082 BsuPI: Intracellular proteinase inhibitor; InterPr 88.58
TIGR02695125 azurin azurin. Azurin is a blue copper-binding pro 85.85
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 84.81
PF1269082 BsuPI: Intracellular proteinase inhibitor; InterPr 84.29
TIGR0265783 amicyanin amicyanin. Members of this family are am 84.03
COG1622247 CyoA Heme/copper-type cytochrome/quinol oxidases, 82.21
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 81.35
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 80.38
>TIGR03389 laccase laccase, plant Back     alignment and domain information 
Probab=100.00  E-value=9.5e-107  Score=867.40  Aligned_cols=508  Identities=67%  Similarity=1.138  Sum_probs=420.7

Q ss_pred             ceeEEEEEEEEEEeeeccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccC
Q 009392           21 CRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQC  100 (535)
Q Consensus        21 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~  100 (535)
                      |++|+|+|+|+++.+++||+++.+++|||++|||+|++++||+|+|+|+|+|+++|+|||||++|.+++|+||+|++|||
T Consensus         1 ~~~r~y~~~it~~~~~pdG~~~~~~~~NG~~PGP~i~~~~GD~v~v~v~N~l~~~tsiHwHGl~q~~~~~~DGv~~vTq~   80 (539)
T TIGR03389         1 AEVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQLRNGWADGPAYITQC   80 (539)
T ss_pred             CceEEEEEEEEEEEeccCCcEeEEEEECCcccCCEEEEEcCCEEEEEEEeCCCCCeeEecCCCCCCCCCCCCCCcccccC
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCeEEEEEEeCCCCcceeEecChhhhhcccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHHHHHHHHhCC
Q 009392          101 PIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSG  180 (535)
Q Consensus       101 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g  180 (535)
                      ||+||++|+|+|++.+++||||||||.+.+++||+|+|||+++.+..+++...++|++|+++||++.....++......|
T Consensus        81 pI~PG~s~~Y~f~~~~~~GT~WYHsH~~~~~~Gl~G~lIV~~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~  160 (539)
T TIGR03389        81 PIQPGQSYVYNFTITGQRGTLWWHAHISWLRATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTG  160 (539)
T ss_pred             CcCCCCeEEEEEEecCCCeeEEEecCchhhhccceEEEEEcCCCCCCCCCCCCCceEEEEecccccCCHHHHHHHHHhcC
Confidence            99999999999998569999999999988889999999999987766666677899999999999998888777666666


Q ss_pred             CCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeC
Q 009392          181 LAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIA  260 (535)
Q Consensus       181 ~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~  260 (535)
                      ..+.++++++|||+.++.++|+....+.++|++||+|||||||+|....+.|+|+||+|+|||+||.+++|+.++++.|+
T Consensus       161 ~~~~~~d~~liNG~~~~~~~~~~~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa~DG~~~~P~~~~~l~i~  240 (539)
T TIGR03389       161 GAPNVSDAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIG  240 (539)
T ss_pred             CCCCccceEEECCCcCCCCCCCCCCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEEEeCCcccCceEeCeEEec
Confidence            55667899999999887788987777899999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCC
Q 009392          261 PGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKK  340 (535)
Q Consensus       261 pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~  340 (535)
                      +||||||+|++++++|+||||+.+..++...+.+....|||+|.++.....+..+..+..++......+...++++..+.
T Consensus       241 ~GqRydVlv~a~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~  320 (539)
T TIGR03389       241 PGQTTNVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPAYNDTAAATNFSNKLRSLNSAQ  320 (539)
T ss_pred             CCCEEEEEEECCCCCceEEEEEeccccCccCCCCcceEEEEEECCCCCCCCCCCCCCCCCCchhhhhHHHhhcccccccC
Confidence            99999999999988899999998765443333456789999999865533232222333333322212222344444344


Q ss_pred             CCCCCCCccceEEEEEeecCcCCCC--CccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCC
Q 009392          341 YPAKVPQTVDHNLLFTVGLGVNPCP--SCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFT  418 (535)
Q Consensus       341 ~p~~~p~~~~~~~~l~~~~~~~~~~--~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~  418 (535)
                      +|..+|..+++++.+.+.++.....  .+...++..+.|++|+++|..|++|+|.+.+.++++.+..++++.+|++|++.
T Consensus       321 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~in~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~  400 (539)
T TIGR03389       321 YPANVPVTIDRRLFFTIGLGLDPCPNNTCQGPNGTRFAASMNNISFVMPTTALLQAHYFGISGVFTTDFPANPPTKFNYT  400 (539)
T ss_pred             CCCCCCCCCCeEEEEEeecccccCcccccccCCCcEEEEEECCcccCCCCcchhhhhhcccCCccccCCccCCCccccCC
Confidence            4444555567777766654432110  01122455788999999999899898888777666777777888888888776


Q ss_pred             CCC--CCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEE
Q 009392          419 GTP--KNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIG  496 (535)
Q Consensus       419 ~~~--~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~  496 (535)
                      +.+  .++..+.+++++.++.|++|||+|+|.+.+....||||||||+||||++|.|.|++.+....+|+.||++|||+.
T Consensus       401 ~~~~~~~~~~~~~~~v~~~~~~~~V~ivi~n~~~~~~~~HP~HLHGh~F~Vlg~g~g~~~~~~~~~~~nl~nP~rRDTv~  480 (539)
T TIGR03389       401 GTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVDPPERNTVG  480 (539)
T ss_pred             CCCcccccccccCceEEEecCCCEEEEEEecCCcCCCCCCcEeEcCCceEEEEeccCCCCcccCccccccCCCCeeeeEE
Confidence            652  233345578899999999999999997533455899999999999999999999876555578999999999999


Q ss_pred             eCCCCEEEECCCCCCCCCCeeeec------cCceeeee
Q 009392          497 VPSGGWVAIRXXXXXXXXAQIIQE------YGLCIAIW  528 (535)
Q Consensus       497 vp~~g~~virf~adnPG~w~~HCH------~gm~~~~~  528 (535)
                      ||++||++|||++||||+|+||||      .||+..|.
T Consensus       481 vp~~g~vvirf~adNPG~W~~HCHi~~H~~~Gm~~~~~  518 (539)
T TIGR03389       481 VPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFL  518 (539)
T ss_pred             cCCCceEEEEEecCCCeEEEEEecccchhhhcceEEEE
Confidence            999999999999999999999999      67777653

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>TIGR03389 laccase laccase, plant Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>TIGR03094 sulfo_cyanin sulfocyanin Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>TIGR02695 azurin azurin Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo Back     alignment and domain information
>TIGR02695 azurin azurin Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query535
1aoz_A552 Refined Crystal Structure Of Ascorbate Oxidase At 1 1e-44
1gyc_A499 Crystal Structure Determination At Room Temperature 9e-32
2hrg_A496 Crystal Structure Of Blue Laccase From Trametes Tro 1e-31
3kw7_A502 Crystal Structure Of Lacb From Trametes Sp. Ah28-2 2e-30
2qt6_A498 Crystal Structure Determination Of A Blue Laccase F 9e-30
3fpx_A499 Native Fungus Laccase From Trametes Hirsuta Length 2e-29
3pxl_A499 Type-2 Cu-Depleted Fungus Laccase From Trametes Hir 2e-29
4a2f_A497 Coriolopsis Gallica Laccase Collected At 12.65 Kev 2e-29
4a2d_A496 Coriolopsis Gallica Laccase T2 Copper Depleted At P 2e-29
2h5u_A499 Crystal Structure Of Laccase From Cerrena Maxima At 9e-29
2hzh_A499 Crystal Structure Of Laccase From Coriolus Zonatus 1e-28
3div_A499 Crystal Structure Of Laccase From Cerrena Maxima At 1e-28
1kya_A499 Active Laccase From Trametes Versicolor Complexed W 6e-28
3t6v_A495 Crystal Structure Of Laccase From Steccherinum Ochr 5e-27
1v10_A521 Structure Of Rigidoporus Lignosus Laccase From Hemi 1e-26
2xyb_A497 Crystal Structure Of A Fully Functional Laccase Fro 7e-26
1hfu_A503 Type-2 Cu-Depleted Laccase From Coprinus Cinereus A 1e-25
1a65_A504 Type-2 Cu-depleted Laccase From Coprinus Cinereus L 1e-25
1zpu_A534 Crystal Structure Of Fet3p, A Multicopper Oxidase T 2e-24
3sqr_A580 Crystal Structure Of Laccase From Botrytis Aclada A 4e-24
3v9e_A580 Structure Of The L513m Mutant Of The Laccase From B 5e-24
3pps_A604 Crystal Structure Of An Ascomycete Fungal Laccase F 8e-20
3g5w_A318 Crystal Structure Of Blue Copper Oxidase From Nitro 4e-15
1gw0_A559 Crystal Structure Of Laccase From Melanocarpus Albo 1e-14
3dkh_A559 L559a Mutant Of Melanocarpus Albomyces Laccase Leng 2e-14
2q9o_A559 Near-Atomic Resolution Structure Of A Melanocarpus 2e-14
2xu9_A439 Crystal Structure Of Laccase From Thermus Thermophi 2e-12
3gdc_A288 Crystal Structure Of Multicopper Oxidase Length = 2 6e-08
3zx1_A481 Multicopper Oxidase From Campylobacter Jejuni: A Me 1e-06
3aw5_A448 Structure Of A Multicopper Oxidase From The Hyperth 4e-05
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 Back     alignment and structure 
Iteration: 1

 Score =  177 bits (449), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 229/519 (44%), Gaps = 60/519 (11%)
Query: 22  RVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYN-VTIHW 80
           ++RHYK+ V        C+   ++ +N +FPGPT+ A   D+V+V++ N +    V IHW
Sbjct: 2   QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHW 61
Query: 81  HGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIV 139
           HG+ Q  T WADG A I+QC I  G ++ YNFT+    GT  +H H+   R A ++G+++
Sbjct: 62  HGILQRGTPWADGTASISQCAINPGETFFYNFTVDNP-GTFFYHGHLGMQRSAGLYGSLI 120
Query: 140 ILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAP---------------- 183
           + P +G   PF     E+ ++L++WW    +++  Q +     P                
Sbjct: 121 VDPPQGKKEPF-HYDGEINLLLSDWWH---QSIHKQEVGLSSKPIRWIGEPQTILLNGRG 176
Query: 184 ----NVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKL 239
               +++  +  N +P  +    S   +   V   KTY +RI +      L F I  H+L
Sbjct: 177 QFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236
Query: 240 TVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKT-SGKYLVAASPFMDAPIAVDNVTAT 298
            VVE D  YV+PF T +I I  G++ +VL++ D+  S  Y V+       P     +T  
Sbjct: 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLL 296
Query: 299 ATLHYSGXXXXXXXXXXXXPPKNGTAIANKFIDSLR-------SLNSKKYPAKVPQTVDH 351
             L  S             PP+  T   + F  S         ++ S K P K  + +  
Sbjct: 297 NYLPNS-----VSKLPTSPPPQ--TPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRI-- 347
Query: 352 NLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNP 411
             L      +N            V  +IN+V+  +P    L A  +N+   F  + P   
Sbjct: 348 -FLLNTQNVIN----------GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEV 396
Query: 412 -PHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAP---ENHPVHLHGFNFFA 467
            P  Y+    P N +T  G   Y+      V +ILQ+  ++     E HP HLHG +F+ 
Sbjct: 397 FPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWV 456
Query: 468 VGKGLGXXXXXXXXXXXXLVDPVERNTIGVPSGGWVAIR 506
           +G G G            L +P  RNT+ +   GW AIR
Sbjct: 457 LGYGDG-KFSAEEESSLNLKNPPLRNTVVIFPYGWTAIR 494
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 Back     alignment and structure
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 Back     alignment and structure
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 Back     alignment and structure
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 Back     alignment and structure
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 Back     alignment and structure
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 Back     alignment and structure
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 Back     alignment and structure
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 Back     alignment and structure
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 Back     alignment and structure
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 Back     alignment and structure
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 Back     alignment and structure
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 Back     alignment and structure
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 Back     alignment and structure
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 Back     alignment and structure
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 Back     alignment and structure
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 Back     alignment and structure
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 Back     alignment and structure
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 Back     alignment and structure
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 Back     alignment and structure
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas Europaea Length = 318 Back     alignment and structure
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 Back     alignment and structure
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 Back     alignment and structure
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase Length = 288 Back     alignment and structure
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A Metallo-Oxidase Length = 481 Back     alignment and structure
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The Hyperthermophilic Archaeon Pyrobaculum Aerophilum Length = 448 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query535
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 0.0
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 0.0
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 1e-172
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 1e-171
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 1e-170
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 1e-169
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 1e-166
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 1e-163
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 1e-108
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 5e-98
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 9e-57
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 7e-48
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 5e-39
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 4e-37
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 1e-32
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 1e-30
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 1e-29
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 4e-26
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 2e-28
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 4e-27
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 6e-27
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 1e-26
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 9e-16
2zoo_A442 Probable nitrite reductase; electron transfer, ele 3e-26
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 9e-26
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 4e-24
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 3e-22
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 4e-22
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 1e-04
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 3e-21
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 1e-20
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 4e-16
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 1e-15
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 1e-12
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 3e-12
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 8e-07
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 Back     alignment and structure
 Score =  570 bits (1470), Expect = 0.0
 Identities = 141/511 (27%), Positives = 224/511 (43%), Gaps = 44/511 (8%)

Query: 22  RVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHW 80
           ++RHYK+ V        C+   ++ +N +FPGPT+ A   D+V+V++ N +    V IHW
Sbjct: 2   QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHW 61

Query: 81  HGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIV 139
           HG+ Q  T WADG A I+QC I  G ++ YNFT+    GT  +H H+   R A ++G+++
Sbjct: 62  HGILQRGTPWADGTASISQCAINPGETFFYNFTVD-NPGTFFYHGHLGMQRSAGLYGSLI 120

Query: 140 ILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGL-APNVSDSHTING----- 193
           + P +G   PF     E+ ++L++WW               +       +  +NG     
Sbjct: 121 VDPPQGKKEPFH-YDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFD 179

Query: 194 -----------QPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVV 242
                      +P  +    S   +   V   KTY +RI +      L F I  H+L VV
Sbjct: 180 CSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239

Query: 243 EVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGK-YLVAASPFMDAPIAVDNVTATATL 301
           E D  YV+PF T +I I  G++ +VL++ D+   + Y V+       P   +       L
Sbjct: 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHP---NTPPGLTLL 296

Query: 302 HYSGTLASSATT--LTSTPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGL 359
           +Y     S   T     TP  +    +  F   + +      P   P   +  +      
Sbjct: 297 NYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKP---PVKFNRRIFLLNTQ 353

Query: 360 GVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNP-PHTYNFT 418
            V             V  +IN+V+  +P    L A  +N+   F  + P    P  Y+  
Sbjct: 354 NV---------INGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDID 404

Query: 419 GTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAP---ENHPVHLHGFNFFAVGKGLGNF 475
             P N +T  G   Y+      V +ILQ+  ++     E HP HLHG +F+ +G G G F
Sbjct: 405 TPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKF 464

Query: 476 NPKKDPKKFNLVDPVERNTIGVPSGGWVAIR 506
           +  ++    NL +P  RNT+ +   GW AIR
Sbjct: 465 SA-EEESSLNLKNPPLRNTVVIFPYGWTAIR 494
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Length = 770 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query535
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 100.0
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 100.0
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 100.0
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 100.0
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 100.0
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 100.0
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 100.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 100.0
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 100.0
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 100.0
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 100.0
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 100.0
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 100.0
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 100.0
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 100.0
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 100.0
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 100.0
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 100.0
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 100.0
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 100.0
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 100.0
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 100.0
2zoo_A442 Probable nitrite reductase; electron transfer, ele 100.0
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 100.0
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 100.0
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 100.0
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 100.0
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 100.0
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 100.0
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 100.0
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 100.0
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 100.0
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 100.0
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 99.93
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.92
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 99.92
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 99.91
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 99.89
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 99.88
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 99.87
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 99.8
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 99.8
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 99.76
1sdd_B 647 Coagulation factor V; copper-binding protein, cofa 99.76
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 99.75
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 99.75
2r7e_B 770 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.73
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 99.69
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 99.68
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 99.67
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 99.66
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 99.63
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 99.63
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 99.6
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 99.59
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 99.57
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 99.57
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 99.55
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 99.55
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 99.53
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 99.52
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 99.49
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 99.46
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 99.45
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 99.43
2cal_A154 Rusticyanin; iron respiratory electron transport c 99.42
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 99.33
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 99.27
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 99.19
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 99.17
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 98.95
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 98.9
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 98.74
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 98.73
3c75_A132 Amicyanin; copper proteins, electron transfer comp 98.64
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.61
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.52
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 98.52
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 98.48
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 98.47
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.44
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 98.42
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.41
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 98.38
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 98.37
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 98.36
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.35
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 98.23
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 98.2
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 98.2
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 98.17
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 98.16
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 98.14
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 98.02
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 98.0
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 97.98
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 97.94
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 97.93
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 97.83
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 97.59
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 97.51
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 97.46
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 97.46
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 97.45
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 97.22
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 97.1
2cal_A154 Rusticyanin; iron respiratory electron transport c 97.05
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 96.97
1byp_A99 Protein (plastocyanin); electron transfer, photosy 96.77
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 96.52
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 96.5
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 96.47
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 96.3
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 96.13
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 96.12
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 96.03
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 95.98
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 95.98
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 95.87
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 95.87
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 95.74
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 94.6
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 93.8
3c75_A132 Amicyanin; copper proteins, electron transfer comp 93.21
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 93.06
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 92.89
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 92.23
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 91.35
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 88.62
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 88.24
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 87.46
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 87.41
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 87.34
3isy_A120 Bsupi, intracellular proteinase inhibitor; intrace 87.0
1cyx_A205 CYOA; electron transport; 2.30A {Escherichia coli} 80.46
3isy_A120 Bsupi, intracellular proteinase inhibitor; intrace 80.4
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
Probab=100.00  E-value=3.9e-98  Score=808.57  Aligned_cols=487  Identities=29%  Similarity=0.507  Sum_probs=391.6

Q ss_pred             ceeEEEEEEEEEEeeeccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCC-CCceEEeCCcccCCCCCCCCCCCccc
Q 009392           21 CRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTGWADGPAYITQ   99 (535)
Q Consensus        21 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~~~~~~~~~DGvp~~tq   99 (535)
                      +++|+|+|+|++..+++||.++.+|+|||++|||+|||++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++||
T Consensus         1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq   80 (552)
T 1aoz_A            1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ   80 (552)
T ss_dssp             CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred             CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence            37899999999999999999999999999999999999999999999999998 99999999999999999999999999


Q ss_pred             CcCCCCCeEEEEEEeCCCCcceeEecChhhhh-cccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHHHHHHHHh
Q 009392          100 CPIQSGHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQ  178 (535)
Q Consensus       100 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~  178 (535)
                      |+|+||++|+|+|++ +++||||||||...|+ +||+|+|||++++....++ ..++|++|+++||++.+..+++.....
T Consensus        81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~  158 (552)
T 1aoz_A           81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS  158 (552)
T ss_dssp             CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred             CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence            999999999999999 8999999999999988 9999999999987654455 346899999999999988776644322


Q ss_pred             CC-CCCCCCceEEEcCccCCCCCC-------------CCC-----CceeEEEeCCCEEEEEEEEcCCCceEEEEEcCcee
Q 009392          179 SG-LAPNVSDSHTINGQPGPISSC-------------SSQ-----GGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKL  239 (535)
Q Consensus       179 ~g-~~~~~~~~~liNG~~~~~~~~-------------~~~-----~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~  239 (535)
                      .. .....+++++|||+..  ++|             +..     ..+.++|++|++|||||||+|..+.+.|+|+||+|
T Consensus       159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~  236 (552)
T 1aoz_A          159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL  236 (552)
T ss_dssp             SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred             ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence            11 1112468999999974  333             321     22489999999999999999999999999999999


Q ss_pred             EEEEeCCcccceeEeceEEeCCCceEEEEEEe-CCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCC--CCCCCC
Q 009392          240 TVVEVDATYVKPFKTDNIVIAPGQTTNVLLSA-DKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASS--ATTLTS  316 (535)
Q Consensus       240 ~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~-~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~--~~~~~~  316 (535)
                      +|||+||.+++|+.++++.|+|||||||+|++ ++++|+|||++.... +.  .+.....|+|+|.++....  .+..+.
T Consensus       237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~--~~~~~~~ail~y~~~~~~~~p~~~~p~  313 (552)
T 1aoz_A          237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH--PNTPPGLTLLNYLPNSVSKLPTSPPPQ  313 (552)
T ss_dssp             EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC--CCSCCEEEEEEETTSCTTSCCSSCCCC
T ss_pred             EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC--CCCccEEEEEEECCCCCCCCCCCCCCC
Confidence            99999999999999999999999999999999 555799999998753 21  2345789999999866421  112233


Q ss_pred             CCCCCCcccccccccccccccCCCCCCCCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhh
Q 009392          317 TPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHF  396 (535)
Q Consensus       317 ~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~  396 (535)
                      .|.+++......  ..++.+..+. +...|..+++++.+.++.+..        + ....|+|||++|..|+.|+|.+.+
T Consensus       314 ~p~~~~~~~~~~--~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~--------~-~~~~w~iNg~s~~~p~~P~L~~~~  381 (552)
T 1aoz_A          314 TPAWDDFDRSKN--FTYRITAAMG-SPKPPVKFNRRIFLLNTQNVI--------N-GYVKWAINDVSLALPPTPYLGAMK  381 (552)
T ss_dssp             CCCTTCHHHHHH--HHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE--------T-TEEEEEETTEEECCCSSCHHHHHH
T ss_pred             CCcccccccccc--ccccccccCC-CCCCCCCCcEEEEEEEeeccC--------C-CeEEEEECCCccCCCCCCHHHHHh
Confidence            444443322111  1233333222 223455678888877654321        2 256799999999999889999888


Q ss_pred             cccCCccccCCCCCCC-ccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCC---CCCCCeeecCCCeEEEeecC
Q 009392          397 FNISGVFTTDFPGNPP-HTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIA---PENHPVHLHGFNFFAVGKGL  472 (535)
Q Consensus       397 ~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~---~~~HP~HlHG~~F~Vl~~g~  472 (535)
                      .+++|++..+++..++ ..|+....+.+...+.++.++.++.|++|||+|+|.+.+.   ...||||||||+||||++|.
T Consensus       382 ~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~  461 (552)
T 1aoz_A          382 YNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD  461 (552)
T ss_dssp             TTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEE
T ss_pred             hcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEeccc
Confidence            8877877766654332 1244332222223456778899999999999999976443   56799999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCCCCCCeeeec------cCceeee
Q 009392          473 GNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXXXXXAQIIQE------YGLCIAI  527 (535)
Q Consensus       473 g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adnPG~w~~HCH------~gm~~~~  527 (535)
                      |.|++ .+...+|+.+|+|||||.||++||++|||++||||.|+||||      .|||..|
T Consensus       462 G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~  521 (552)
T 1aoz_A          462 GKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF  521 (552)
T ss_dssp             SSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEE
T ss_pred             CccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEE
Confidence            99987 445678999999999999999999999999999999999999      8999887
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} Back     alignment and structure
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A Back     alignment and structure
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 535
d1v10a2168 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus 3e-37
d1aoza2209 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C 9e-34
d1hfua2172 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr 1e-33
d1gyca2170 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, 1e-33
d2q9oa2181 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce 3e-33
d1aoza1129 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc 6e-30
d1aoza3214 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C 2e-28
d1gyca1130 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la 3e-28
d1hfua1131 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin 4e-28
d1v10a1136 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T 8e-28
d2q9oa1162 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces 2e-22
d1gska2174 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba 5e-21
d2j5wa1192 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie 4e-20
d1oe2a1159 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige 4e-19
d1kv7a1140 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch 7e-18
d1kv7a2165 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc 9e-18
d2j5wa3207 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap 4e-17
d1sdda1180 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t 1e-16
d1kbva1151 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser 6e-16
d2bw4a1157 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige 1e-14
d1mzya1153 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba 4e-14
d1e30a_153 b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan 9e-14
d2j5wa4179 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap 9e-14
d1gska1181 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci 2e-13
d1gyca3199 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, 3e-11
d1hfua3200 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr 6e-10
d2q9oa3216 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce 1e-09
d1v10a3190 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus 7e-09
d1sddb2139 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B 2e-08
d1gska3154 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba 5e-08
d2j5wa5149 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa 1e-07
d1sdda2116 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos 6e-07
d2j5wa2145 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap 3e-06
d1fwxa1132 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-ter 7e-05
d1kcwa2146 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap 8e-05
d1sddb167 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (B 0.002
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 Back     information, alignment and structure

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Rigidoporus lignosus [TaxId: 219653]

 Score =  132 bits (334), Expect = 3e-37
 Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 4/164 (2%)

Query: 156 EVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGK 215
             V+ +A+W+ S +  +         AP   D+  ING     ++ S+     + V SGK
Sbjct: 7   STVITIADWYHSLSTVLFPNP---NKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGK 63

Query: 216 TYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTS 275
            Y  RI++ +      F I GH++TV+EVD    +P   D++ I  GQ  +V++ A++  
Sbjct: 64  RYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAV 123

Query: 276 GKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPP 319
           G Y + A+P  +          +A   Y G   +  TT  ++  
Sbjct: 124 GNYWIRANP-SNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGT 166
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Length = 132 Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 67 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query535
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 100.0
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 100.0
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 100.0
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 100.0
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.98
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.97
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.97
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.97
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.97
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.96
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.96
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.96
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.96
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.96
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.95
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.95
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.95
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.94
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.92
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.92
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.89
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.88
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.86
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.86
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.86
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 99.85
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.82
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.74
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.69
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.68
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.67
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.66
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.66
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.65
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.63
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.62
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 99.57
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.56
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.56
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 99.54
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.5
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.36
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.32
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.2
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.19
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.18
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 99.15
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.02
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.01
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 98.96
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 98.81
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 98.73
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 98.62
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 98.59
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 98.58
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 98.57
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 98.55
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 98.41
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.4
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 98.37
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 98.36
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.3
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 98.29
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.25
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 98.24
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 98.23
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 98.2
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 98.16
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 98.16
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 98.12
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 98.12
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 98.1
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 98.09
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 98.06
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 98.05
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.04
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.03
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.01
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 97.99
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 97.98
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 97.98
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 97.89
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 97.88
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 97.87
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 97.84
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 97.83
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 97.83
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 97.81
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 97.8
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 97.78
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 97.77
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 97.76
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 97.71
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 97.69
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 97.5
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 97.37
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 97.35
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 97.22
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 97.14
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 97.14
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 97.07
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 96.85
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 96.84
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 96.75
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 96.32
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 96.31
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 95.99
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 95.92
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 95.76
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 95.31
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 94.0
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 91.17
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 90.85
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 90.79
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 88.7
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 88.21
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 88.15
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 87.45
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 87.16
d1cyxa_158 Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 86.4
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 85.19
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 82.52
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 80.52
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Rigidoporus lignosus [TaxId: 219653]

Probab=100.00  E-value=4.8e-40  Score=283.48  Aligned_cols=125  Identities=27%  Similarity=0.501  Sum_probs=117.8

Q ss_pred             eeEEEEEEEEEEeeeccCC-ceeEEEECCCCCCcEEEEecCCEEEEEEEECCC-----CCceEEeCCcccCCCCCCCCCC
Q 009392           22 RVRHYKFNVVMKNSTKLCS-SKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-----YNVTIHWHGVRQLRTGWADGPA   95 (535)
Q Consensus        22 ~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-----~~t~iH~HG~~~~~~~~~DGvp   95 (535)
                      ++++|+|++++..+++||. .+.+++|||++|||+|++++||+|+|+|+|+++     ++|||||||+++.+.+++||++
T Consensus         1 a~v~~~l~~~~~~~~pdG~~~~~~~~~nG~~PGP~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~   80 (136)
T d1v10a1           1 ATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA   80 (136)
T ss_dssp             CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCB
T ss_pred             CEEEEEEEEEEEEECCCCcceeEEEEECCCccCCeEEEECCcEEEEEEEeCCCCcccCcceeEEecccccccccccCCCC
Confidence            4789999999999999995 688999999999999999999999999999975     7899999999999999999999


Q ss_pred             CcccCcCCCCCeEEEEEEeCCCCcceeEecChhhhh-cccEEEEEEeCCCCC
Q 009392           96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIVILPKRGV  146 (535)
Q Consensus        96 ~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~iiV~~~~~~  146 (535)
                      +++||+|.||++|+|+|++++++||||||||.+.|. +||+|+|||+++++.
T Consensus        81 ~~t~~~I~PG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~GL~G~liV~~~~dp  132 (136)
T d1v10a1          81 FVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDP  132 (136)
T ss_dssp             TTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCT
T ss_pred             ccccceECCCCeEEEEEECCCCccceEEecCchhHHhCCCEEEEEECCCccc
Confidence            999999999999999999967899999999999998 999999999988664
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure