Citrus Sinensis ID: 009420

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-----
MGQYSFIVLLFQLILCSHRIVTDAAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANLRPTIVLPESQFTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGYEIVVNSPGSGNLAPSGYYLLFVVHQDVPSEGIWVHVQ
cccEEHHHHHHHHHHcccccccccccccEEEccccccccEEEEEEccccEEEEEEEccccccccccccccccccccccEEEEEEcccccEEEccccccccccccEEcccccEEEEcccccccccEEEEEcccccccccEEccccccccccccEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccEEEEEccccEEEEEcccEEEEEEcccEEEEEcccccccccccccccccEEEcccccccccccccEEEEEEcccccccccccccEEEEEccccEEEEEccccccEEEcccccccEEEEEEEcccccEEEEEcccccccccccccccccccEEEcccccccccEEEccccccccccEEEEEEEcccEEEEEcccccccccccccccccccEEEEEEcccccccccccccEEEcccccEEEccccEEEEEEEEcccccccEEEEEEEccccccccccccccEEEEcccEEEEEccccEEEEEEccccccccccccEEEEEEccccccccEEEEEc
cccHHHHHHHHHHHHcccccccccccccEEEEcccccccHEEEEEccccEEEEEEcccccccccccccccccccccEEEEEEEccccccEEEcccccccccccccEccccEEEEEcccccccEEEEEEccccccccccEEcccccccccccccEEcccccEEEEEcccccccEEcccccccccccccHHHHccccccccccccEEEEcccccEEEEEcccEEEEEccccEEEEEccccccccccccccccccEEcccccccccccccEEEEEccccccccccccccccccccccccccEccccccccEEcccccccccccEEEcccccEEEEEccccccccccccccccccEEEEcccccccccEEEcccccccccccEEEEEcccccEEEEEccccccccccccccccEEEEEEEccccccccccccccEEEEcccccEEEcccEEEEEEEEccccccccEEEEEEccccEEcEcccccEEEEEEEcccEccccccEEEEEEccccccccccccEEEEEEEccccccEEEEEEc
MGQYSFIVLLFQLILCSHRIVTDAAGGGWQLLQKSIGISSMHMQLLNNdrvvmfdrsdfgpsnlslppgkclktdctahsVEYSVLtnefrplfvqsnvwcssgavrpdgvliqtggfndgekkirsfvpcndescdwkeidglgarrwyatdhilpdgriiiiggrrqfnyefypkngapnvyslpflvqtndprvennlypfvflnvdgflfIFANNRAILFdyvnnkvvkqypaipggdprsypssgsavllplknllapsVAAEVLVcggapkgayEQAEKGVFVAALNTCarikitdptptwvletmpqprvmgdmtllpngnvllingagkgtagwelgrdpvlapvvyrpdnipgsrfdlqnpstiprmyHSTAVLLRdgrvlvggsnphayynftgvlfptelsleafspyyldapfanlrptivlpesqftlKYKQKFRVRfsasgpvalNKVTVTMVapsfnthsfsmNQRLLVLASDTVTKLGNSGYEIVvnspgsgnlapsGYYLLFVVHqdvpsegiwvhvq
MGQYSFIVLLFQLILCSHRIVTDAAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIqtggfndgekkirsfvpcndescDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCArikitdptptwvLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRpdnipgsrfdlqnpstiPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANLRPTIVLPESQFTLKYKQKFRVRFsasgpvalNKVTVTMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGYEIVVNSPGSGNLAPSGYYLLFVVHQDVPSEGIWVHVQ
MGQYSFIVLLFQLILCSHRIVTDAAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDgriiiiggrrQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANLRPTIVLPESQFTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGYEIVVNSPGSGNLAPSGYYLLFVVHQDVPSEGIWVHVQ
***YSFIVLLFQLILCSHRIVTDAAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIP***********SAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANLRPTIVLPESQFTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGYEIVVNSPGSGNLAPSGYYLLFVVHQDVPSEGIWVH**
**QYSFIVLLFQLILCSHRIVTDAAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANLRPTIVLPESQFTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGYEIVVNSPGSGNLAPSGYYLLFVVHQDVPSEGIWVHVQ
MGQYSFIVLLFQLILCSHRIVTDAAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANLRPTIVLPESQFTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGYEIVVNSPGSGNLAPSGYYLLFVVHQDVPSEGIWVHVQ
*GQYSFIVLLFQLILCSHRIVTDAAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANLRPTIVLPESQFTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGYEIVVNSPGSGNLAPSGYYLLFVVHQDVPSEGIWVHVQ
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGQYSFIVLLFQLILCSHRIVTDAAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANLRPTIVLPESQFTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGYEIVVNSPGSGNLAPSGYYLLFVVHQDVPSEGIWVHVQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query535 2.2.26 [Sep-21-2011]
I1S2N3680 Galactose oxidase OS=Gibb no no 0.732 0.576 0.255 2e-16
P0CS93680 Galactose oxidase OS=Gibb no no 0.732 0.576 0.255 2e-16
>sp|I1S2N3|GAOA_GIBZE Galactose oxidase OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=GAOA PE=3 SV=1 Back     alignment and function desciption
 Score = 87.8 bits (216), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 183/450 (40%), Gaps = 58/450 (12%)

Query: 95  VQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCD-WKEIDGLGARRWYATD 153
            + +++C   ++  +G ++ TGG ND +K         D S D W     +   R Y + 
Sbjct: 263 TKHDMFCPGISMDGNGQIVVTGG-NDAKK-----TSLYDSSSDSWIPGPDMQVARGYQSS 316

Query: 154 HILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFL 213
             + DGR+  IGG   ++   + KNG   VYS      T+ P  + N      L  D   
Sbjct: 317 ATMSDGRVFTIGG--SWSGGVFEKNG--EVYSPSSKTWTSLPNAKVN----PMLTADKQG 368

Query: 214 FIFANNRAILFDYVNNKVVKQYPAIP--------GGDPRS----YPSSGSAVLLPLKN-L 260
              ++N A LF +    V +  P+           GD +S      + G A      N +
Sbjct: 369 LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAV 428

Query: 261 LAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGD 320
           +  +V  ++L  GG+P      A     +  L        T P   +    +   R    
Sbjct: 429 MYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG----TSPNTVFASNGLYFARTFHT 484

Query: 321 MTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHST 380
             +LP+G+  +  G  +G    +    PV  P +Y P+      F  QNP++I R+YHS 
Sbjct: 485 SVVLPDGSTFITGGQRRGIPFED--STPVFTPEIYVPEQ---DTFYKQNPNSIVRVYHSI 539

Query: 381 AVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANL--RPTIVLPESQ 438
           ++LL DGRV  GG          G         + F+P YL     NL  RP I    +Q
Sbjct: 540 SLLLPDGRVFNGGG------GLCGDCTTNHFDAQIFTPNYLYNSNGNLATRPKITRTSTQ 593

Query: 439 FTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGY 498
                  K   R + S   ++ K ++     +  TH+ + +QR + L   T+T  G + Y
Sbjct: 594 -----SVKVGGRITISTDSSITKASLIRYGTA--THTVNTDQRRIPL---TLTNNGGNSY 643

Query: 499 EIVVNSPGSGNLAPSGYYLLFVVHQ-DVPS 527
              V  P    +A  GY++LFV++   VPS
Sbjct: 644 SFQV--PSDSGVALPGYWMLFVMNSAGVPS 671
Catalyzes the sterospecific oxidation of primary alcohols to the corresponding aldehydes. The biologically relevant substrate of the enzyme is not known as the enzyme exhibits broad substrate specificity from small alcohols through sugars to oligo- and polysaccharides (By similarity).
Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)
EC: 1EC: .EC: 1EC: .EC: 3EC: .EC: 9
>sp|P0CS93|GAOA_GIBZA Galactose oxidase OS=Gibberella zeae GN=GAOA PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query535
357966935545 galactose oxidase [Ziziphus jujuba] 0.958 0.941 0.733 0.0
224066014523 predicted protein [Populus trichocarpa] 0.955 0.977 0.728 0.0
255538846547 Galactose oxidase precursor, putative [R 0.962 0.941 0.712 0.0
356518193558 PREDICTED: galactose oxidase-like [Glyci 0.951 0.912 0.683 0.0
225458077553 PREDICTED: galactose oxidase-like [Vitis 0.985 0.952 0.675 0.0
449460271548 PREDICTED: galactose oxidase-like [Cucum 0.988 0.965 0.654 0.0
356509640530 PREDICTED: galactose oxidase-like [Glyci 0.943 0.952 0.672 0.0
357438207543 Galactose oxidase [Medicago truncatula] 0.947 0.933 0.675 0.0
449514647561 PREDICTED: galactose oxidase-like [Cucum 0.986 0.941 0.642 0.0
449469909561 PREDICTED: galactose oxidase-like [Cucum 0.986 0.941 0.642 0.0
>gi|357966935|gb|AET97563.1| galactose oxidase [Ziziphus jujuba] Back     alignment and taxonomy information
 Score =  800 bits (2065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/525 (73%), Positives = 435/525 (82%), Gaps = 12/525 (2%)

Query: 20  IVTDAAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKC-------- 71
           +  DAAGG WQLLQKSIGIS+MHMQLLNNDRVV+FDR+DFGPSNLSLP GKC        
Sbjct: 22  LFADAAGGQWQLLQKSIGISAMHMQLLNNDRVVIFDRTDFGPSNLSLPAGKCRNDPNDTV 81

Query: 72  LKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPC 131
           L  DCTAHS EY V TN FRPL VQ++VWCSSG V PDG LIQTGG+NDGE+++R + PC
Sbjct: 82  LTVDCTAHSAEYDVATNTFRPLTVQTDVWCSSGCVTPDGRLIQTGGYNDGERRVRIYKPC 141

Query: 132 NDESCDWKEID-GLGARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNG-APNVYSLPFL 189
               CDW+EI+ GL ARRWYAT+HILPDGR IIIGGRRQFNYEFYPK   A NVYSLPFL
Sbjct: 142 T--GCDWQEIELGLAARRWYATNHILPDGRQIIIGGRRQFNYEFYPKTASASNVYSLPFL 199

Query: 190 VQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRSYPSS 249
           VQTNDP++ENNLYPFVFLN DG LF+FANNRAIL DYV NKV+K YP IPGGDPRSYPS+
Sbjct: 200 VQTNDPKIENNLYPFVFLNTDGNLFVFANNRAILLDYVKNKVLKTYPEIPGGDPRSYPST 259

Query: 250 GSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVL 309
           GSAVLLPL+NL A  + AEVLVCGGAPKG+Y +A K  F+ AL TCARIKITDP P WV+
Sbjct: 260 GSAVLLPLENLKANFIEAEVLVCGGAPKGSYTEAIKRNFIGALKTCARIKITDPNPQWVV 319

Query: 310 ETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQN 369
           ETMP  RVMGDMTLLPNGNVL+ING   GTAGWELGR+PVL PV+Y+P+N  GSRF+ QN
Sbjct: 320 ETMPTARVMGDMTLLPNGNVLIINGGAAGTAGWELGRNPVLNPVIYKPNNAVGSRFESQN 379

Query: 370 PSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANLR 429
           PS+IPRMYHSTA+LLRDGRVLVGGSNPH YYNFTGV+FPT+LSLEAFSP YL+A F+NLR
Sbjct: 380 PSSIPRMYHSTAILLRDGRVLVGGSNPHVYYNFTGVIFPTDLSLEAFSPSYLEAQFSNLR 439

Query: 430 PTIVLPESQFTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTHSFSMNQRLLVLASDT 489
           P IV P SQ  L Y QK  VRF+ +G VA   V+VTMV+PSF THSFSMNQRLLVL +++
Sbjct: 440 PRIVSPTSQTKLAYAQKLAVRFTVTGTVATKLVSVTMVSPSFTTHSFSMNQRLLVLGAES 499

Query: 490 VTKLGNSGYEIVVNSPGSGNLAPSGYYLLFVVHQDVPSEGIWVHV 534
           V  LG + YE+ V +P SGNLAPSGYYLLFVVHQ++PS GIWV +
Sbjct: 500 VRNLGKTTYEVQVTTPSSGNLAPSGYYLLFVVHQEIPSLGIWVQI 544

Source: Ziziphus jujuba

Species: Ziziphus jujuba

Genus: Ziziphus

Family: Rhamnaceae

Order: Rosales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224066014|ref|XP_002301997.1| predicted protein [Populus trichocarpa] gi|222843723|gb|EEE81270.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255538846|ref|XP_002510488.1| Galactose oxidase precursor, putative [Ricinus communis] gi|223551189|gb|EEF52675.1| Galactose oxidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356518193|ref|XP_003527766.1| PREDICTED: galactose oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|225458077|ref|XP_002280559.1| PREDICTED: galactose oxidase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449460271|ref|XP_004147869.1| PREDICTED: galactose oxidase-like [Cucumis sativus] gi|449527693|ref|XP_004170844.1| PREDICTED: galactose oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356509640|ref|XP_003523554.1| PREDICTED: galactose oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|357438207|ref|XP_003589379.1| Galactose oxidase [Medicago truncatula] gi|355478427|gb|AES59630.1| Galactose oxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449514647|ref|XP_004164439.1| PREDICTED: galactose oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449469909|ref|XP_004152661.1| PREDICTED: galactose oxidase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query535
TAIR|locus:2035408548 AT1G19900 "AT1G19900" [Arabido 0.988 0.965 0.619 1.3e-180
TAIR|locus:2005664547 AT1G75620 "AT1G75620" [Arabido 0.966 0.945 0.638 2.1e-180
TAIR|locus:2076696547 AT3G57620 "AT3G57620" [Arabido 0.928 0.908 0.516 6.8e-143
TAIR|locus:2180791594 AT5G19580 "AT5G19580" [Arabido 0.940 0.846 0.450 2.7e-116
TAIR|locus:2019564615 GLOX1 "AT1G67290" [Arabidopsis 0.936 0.814 0.460 1.7e-114
TAIR|locus:2084480545 AT3G53950 "AT3G53950" [Arabido 0.960 0.943 0.433 1e-107
TAIR|locus:2035408 AT1G19900 "AT1G19900" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1753 (622.1 bits), Expect = 1.3e-180, P = 1.3e-180
 Identities = 336/542 (61%), Positives = 402/542 (74%)

Query:     4 YSFIVLLFQLILCSHRIVTDAAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSN 63
             Y+  +   Q +L  H  V+ AA G W+ +  ++GIS+MHMQLL+NDRVVM+DR++FGPSN
Sbjct:    10 YALFLTTLQFLLTHH--VSSAARGLWKYIAPNVGISAMHMQLLHNDRVVMYDRTNFGPSN 67

Query:    64 LSLPPGKCL--------KTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQT 115
             +SLP G C         K DCTAHS+EY V TN  RPL VQSN WCSSG+VRPDGVL+QT
Sbjct:    68 ISLPNGNCRDNPQDAVSKIDCTAHSIEYDVATNTIRPLTVQSNTWCSSGSVRPDGVLVQT 127

Query:   116 GGFNDGEKKIRSFVPCNDESCDWKEID-GLGARRWYATDHILPDXXXXXXXXXXQFNYEF 174
             GG  DGE K R+F PCN+  CDW E++ GL  RRWYA++HILPD          QFNYEF
Sbjct:   128 GGDRDGELKTRTFSPCNNNQCDWVEMNNGLKKRRWYASNHILPDGKQIVMGGQGQFNYEF 187

Query:   175 YPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQ 234
             +PK   PNV +LPFL +T+D   ENNLYPFVF+N DG LF+FANNRAIL DYV N VVK 
Sbjct:   188 FPKTTNPNVVALPFLAETHDQGQENNLYPFVFMNTDGNLFMFANNRAILLDYVKNTVVKT 247

Query:   235 YPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNT 294
             +PAIPGGDPR+YPS+GSAVLLPLKNL A +V  EVLVCGGAPKG+Y  A K  FV AL+T
Sbjct:   248 FPAIPGGDPRNYPSTGSAVLLPLKNLEADNVETEVLVCGGAPKGSYNLARKKTFVKALDT 307

Query:   295 CARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVV 354
             CARIKI D  P W +E MP  RVMGDM  LPNG+VLLING   GTA WELGR PVLAP +
Sbjct:   308 CARIKINDAKPEWAVEKMPHARVMGDMIPLPNGDVLLINGGSFGTAAWELGRTPVLAPDL 367

Query:   355 YRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLE 414
             Y P+N  GSRF+   P+TIPRMYHS A+LLRDGRVLVGGSNPHA+YN+TGVLFPTELSLE
Sbjct:   368 YHPENPVGSRFESLRPTTIPRMYHSAAILLRDGRVLVGGSNPHAFYNYTGVLFPTELSLE 427

Query:   415 AFSPYYLDAPFANLRPTIVLPESQFTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTH 474
             AFSP YL   F+NLRP I+ PE Q  +KY    +++FS +G V      VTMV P+F TH
Sbjct:   428 AFSPVYLQREFSNLRPKIISPEPQSMIKYGTNLKLKFSVTGEVT-TPAKVTMVFPTFTTH 486

Query:   475 SFSMNQRLLVLASDTVTKLGNSG-YEIVVNSPGSGNLAPSGYYLLFVVHQDVPSEGIWVH 533
             SF+MNQR+LVL +   T+ G S  YE+ V +P S N+A  GYY++FVV+QD+PSEG+WV 
Sbjct:   487 SFAMNQRVLVLDNVKFTRKGKSPMYEVQVRTPRSANIAWPGYYMIFVVNQDIPSEGVWVK 546

Query:   534 VQ 535
             ++
Sbjct:   547 LE 548
GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2005664 AT1G75620 "AT1G75620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076696 AT3G57620 "AT3G57620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180791 AT5G19580 "AT5G19580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019564 GLOX1 "AT1G67290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084480 AT3G53950 "AT3G53950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.II.1699.1
hypothetical protein (523 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query535
pfam07250243 pfam07250, Glyoxal_oxid_N, Glyoxal oxidase N-termi 1e-126
cd02851103 cd02851, E_set_GO_C, C-terminal Early set domain a 2e-27
pfam0911897 pfam09118, DUF1929, Domain of unknown function (DU 6e-26
>gnl|CDD|219349 pfam07250, Glyoxal_oxid_N, Glyoxal oxidase N-terminus Back     alignment and domain information 
 Score =  368 bits (947), Expect = e-126
 Identities = 154/245 (62%), Positives = 185/245 (75%), Gaps = 13/245 (5%)

Query: 41  MHMQLLNNDRVVMFDRSDFGPSNLSLPPGKC--------LKTDCTAHSVEYSVLTNEFRP 92
           MHMQLL+N++V+MFDR++FGPSN+SLPPG+C        LK DC+AHSV Y V TN  RP
Sbjct: 1   MHMQLLHNNKVIMFDRTNFGPSNISLPPGRCRPDPGDAPLKIDCSAHSVLYDVATNTIRP 60

Query: 93  LFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCN-DESCDWKEI-DGLGARRWY 150
           L VQ++ WCSSGA+  DG L+QTGG  DGE+K+R F PC+ +++CDW E    L ARRWY
Sbjct: 61  LTVQTDTWCSSGALLSDGTLVQTGGDGDGERKVRYFSPCDSNDTCDWIEFPATLAARRWY 120

Query: 151 ATDHILPDGRIIIIGGRRQFNYEFYPKNG-APNVYSLPFLVQTNDPRVENNLYPFVFLNV 209
           AT+ ILPDG  IIIGGRR FNYEF+PK G  P   +L FL +T D   ENNLYPFVFL  
Sbjct: 121 ATNQILPDGSFIIIGGRRAFNYEFFPKKGQNPRASALRFLRETEDS-QENNLYPFVFLLP 179

Query: 210 DGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEV 269
           DG LFIFANNR+ILFDY  N VVK++P IPGG PR+YPSSGS+VLLPL +    ++ AEV
Sbjct: 180 DGNLFIFANNRSILFDYRKNTVVKEFPQIPGG-PRNYPSSGSSVLLPLDDRNPDNLTAEV 238

Query: 270 LVCGG 274
           LVCGG
Sbjct: 239 LVCGG 243

This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. Length = 243
>gnl|CDD|199882 cd02851, E_set_GO_C, C-terminal Early set domain associated with the catalytic domain of galactose oxidase Back     alignment and domain information
>gnl|CDD|220118 pfam09118, DUF1929, Domain of unknown function (DUF1929) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 535
PF07250243 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP 100.0
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
PHA02713557 hypothetical protein; Provisional 100.0
PHA02713557 hypothetical protein; Provisional 100.0
cd02851101 Galactose_oxidase_C_term Galactose oxidase C-termi 100.0
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 100.0
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 100.0
PF0911898 DUF1929: Domain of unknown function (DUF1929); Int 100.0
PLN02153341 epithiospecifier protein 100.0
PHA02790480 Kelch-like protein; Provisional 99.97
PHA02790480 Kelch-like protein; Provisional 99.97
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.97
PLN02193470 nitrile-specifier protein 99.96
PHA03098534 kelch-like protein; Provisional 99.96
PHA03098534 kelch-like protein; Provisional 99.96
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.95
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.94
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 99.94
PLN02193470 nitrile-specifier protein 99.94
PLN02153341 epithiospecifier protein 99.94
KOG4693392 consensus Uncharacterized conserved protein, conta 99.81
KOG4693392 consensus Uncharacterized conserved protein, conta 99.78
KOG0379482 consensus Kelch repeat-containing proteins [Genera 99.68
KOG0379482 consensus Kelch repeat-containing proteins [Genera 99.5
KOG1230521 consensus Protein containing repeated kelch motifs 99.36
KOG1230521 consensus Protein containing repeated kelch motifs 99.31
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 99.29
COG3055381 Uncharacterized protein conserved in bacteria [Fun 99.26
COG3055381 Uncharacterized protein conserved in bacteria [Fun 99.24
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 99.2
PF07250243 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP 99.18
PF1396450 Kelch_6: Kelch motif 98.87
PF1396450 Kelch_6: Kelch motif 98.55
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 98.45
smart0061247 Kelch Kelch domain. 98.44
smart0061247 Kelch Kelch domain. 98.3
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 98.15
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 98.12
PF1341549 Kelch_3: Galactose oxidase, central domain 98.08
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 98.04
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 97.98
PF1341549 Kelch_3: Galactose oxidase, central domain 97.92
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 97.57
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 97.56
PRK13684334 Ycf48-like protein; Provisional 97.45
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 97.17
PLN02772 398 guanylate kinase 97.14
PLN02772398 guanylate kinase 96.94
KOG0286343 consensus G-protein beta subunit [General function 96.65
PRK11028330 6-phosphogluconolactonase; Provisional 96.65
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 96.46
COG4257353 Vgb Streptogramin lyase [Defense mechanisms] 96.42
TIGR03866300 PQQ_ABC_repeats PQQ-dependent catabolism-associate 96.38
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 96.29
TIGR03866300 PQQ_ABC_repeats PQQ-dependent catabolism-associate 95.94
PF1385442 Kelch_5: Kelch motif 95.79
cd00200289 WD40 WD40 domain, found in a number of eukaryotic 95.67
PF1385442 Kelch_5: Kelch motif 95.45
PRK11028330 6-phosphogluconolactonase; Provisional 95.22
KOG2437723 consensus Muskelin [Signal transduction mechanisms 95.19
COG4257353 Vgb Streptogramin lyase [Defense mechanisms] 95.15
KOG0315311 consensus G-protein beta subunit-like protein (con 95.13
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 94.67
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 94.48
KOG0310487 consensus Conserved WD40 repeat-containing protein 94.45
PF08450246 SGL: SMP-30/Gluconolaconase/LRE-like region; Inter 94.27
PF14870302 PSII_BNR: Photosynthesis system II assembly factor 94.19
KOG0310487 consensus Conserved WD40 repeat-containing protein 93.6
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 93.08
KOG0315311 consensus G-protein beta subunit-like protein (con 92.41
KOG2437723 consensus Muskelin [Signal transduction mechanisms 92.28
KOG0278334 consensus Serine/threonine kinase receptor-associa 92.09
PTZ00421493 coronin; Provisional 91.6
PF08450246 SGL: SMP-30/Gluconolaconase/LRE-like region; Inter 90.8
PF07893342 DUF1668: Protein of unknown function (DUF1668); In 90.67
PLN00181793 protein SPA1-RELATED; Provisional 90.48
PRK13684334 Ycf48-like protein; Provisional 90.41
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 88.91
PF03089337 RAG2: Recombination activating protein 2; InterPro 88.52
PTZ00421493 coronin; Provisional 87.99
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 87.87
PF07893342 DUF1668: Protein of unknown function (DUF1668); In 87.36
PF14870302 PSII_BNR: Photosynthesis system II assembly factor 87.29
PTZ00420568 coronin; Provisional 86.57
KOG0266456 consensus WD40 repeat-containing protein [General 85.61
COG5184476 ATS1 Alpha-tubulin suppressor and related RCC1 dom 85.53
PTZ00420568 coronin; Provisional 85.22
KOG0291 893 consensus WD40-repeat-containing subunit of the 18 85.19
PLN00033398 photosystem II stability/assembly factor; Provisio 84.75
cd00200289 WD40 WD40 domain, found in a number of eukaryotic 84.28
KOG0278334 consensus Serine/threonine kinase receptor-associa 83.95
KOG0296399 consensus Angio-associated migratory cell protein 83.54
PF13088275 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 82.31
PLN00181793 protein SPA1-RELATED; Provisional 82.02
PRK01742429 tolB translocation protein TolB; Provisional 81.83
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 80.65
KOG0279315 consensus G protein beta subunit-like protein [Sig 80.16
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes Back     alignment and domain information 
Probab=100.00  E-value=6.5e-44  Score=344.99  Aligned_cols=232  Identities=58%  Similarity=1.074  Sum_probs=207.5

Q ss_pred             eEEEEeeCCeEEEEecCCCCCCCCCCCCCcc--------ccCCCCceeEEEECCCCCEEECccccccccccceecCCCcE
Q 009420           41 MHMQLLNNDRVVMFDRSDFGPSNLSLPPGKC--------LKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVL  112 (535)
Q Consensus        41 ~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~--------~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l  112 (535)
                      ||+++++++||+++++.+.|++++.+|+|+|        .+.||.+++.+|||.|++++++...++.||+++++|+||++
T Consensus         1 mh~~~~~~~~v~~~d~t~~g~s~~~~~~~~c~~~~~~~~~~~d~~a~s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~l   80 (243)
T PF07250_consen    1 MHMALLHNNKVIMFDRTNFGPSNISLPDGRCRDNPEDNALKFDGPAHSVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRL   80 (243)
T ss_pred             CeEeEccCCEEEEEeCCCcccccccCCCCccccCccccccccCceEEEEEEecCCCcEEeccCCCCCcccCcCCCCCCCE
Confidence            6999999999999999999999999999999        55789999999999999999999999999999999999999


Q ss_pred             EEEcCCCCCCCeEEEEcCCC-CCCCCceecC-CCCcccccceEEEecCCcEEEEcCccCCeeEEEeCCC-CCCeeeeccc
Q 009420          113 IQTGGFNDGEKKIRSFVPCN-DESCDWKEID-GLGARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNG-APNVYSLPFL  189 (535)
Q Consensus       113 ~v~GG~~~g~~~v~~ydp~~-~~~~~W~~~~-~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~-~~~w~~~~~l  189 (535)
                      +++||+.+|.+.++.|+|++ +++++|.+.+ .|..+|||+++++|+||+|+|+||+..+++|+||+.. ......+++|
T Consensus        81 l~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l  160 (243)
T PF07250_consen   81 LQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFL  160 (243)
T ss_pred             EEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCCCCEEEEeCcCCCcccccCCccCCCCceeeecc
Confidence            99999998999999999984 3458999987 6999999999999999999999999999999997642 2334455666


Q ss_pred             cccCCccccCCCcceEEEeeCCcEEEEecCeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEE
Q 009420          190 VQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEV  269 (535)
Q Consensus       190 ~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkI  269 (535)
                      ..+.+ ..+.++||+++++|||+||+++++.+++||++++++.+.+|.||++ .|.||.+|++|||||.-...+++..+|
T Consensus       161 ~~~~~-~~~~nlYP~~~llPdG~lFi~an~~s~i~d~~~n~v~~~lP~lPg~-~R~YP~sgssvmLPl~~~~~~~~~~ev  238 (243)
T PF07250_consen  161 SQTSD-TLPNNLYPFVHLLPDGNLFIFANRGSIIYDYKTNTVVRTLPDLPGG-PRNYPASGSSVMLPLTDTPPNNYTAEV  238 (243)
T ss_pred             hhhhc-cCccccCceEEEcCCCCEEEEEcCCcEEEeCCCCeEEeeCCCCCCC-ceecCCCcceEEecCccCCCCCCCeEE
Confidence            55544 2678999999999999999999999999999999987789999998 899999999999999212367889999


Q ss_pred             EEEcC
Q 009420          270 LVCGG  274 (535)
Q Consensus       270 yv~GG  274 (535)
                      +||||
T Consensus       239 lvCGG  243 (243)
T PF07250_consen  239 LVCGG  243 (243)
T ss_pred             EEeCC
Confidence            99998

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>cd02851 Galactose_oxidase_C_term Galactose oxidase C-terminus domain Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PF09118 DUF1929: Domain of unknown function (DUF1929); InterPro: IPR015202 This domain adopts a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>PRK13684 Ycf48-like protein; Provisional Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>KOG0286 consensus G-protein beta subunit [General function prediction only] Back     alignment and domain information
>PRK11028 6-phosphogluconolactonase; Provisional Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>COG4257 Vgb Streptogramin lyase [Defense mechanisms] Back     alignment and domain information
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein Back     alignment and domain information
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>PRK11028 6-phosphogluconolactonase; Provisional Back     alignment and domain information
>KOG2437 consensus Muskelin [Signal transduction mechanisms] Back     alignment and domain information
>COG4257 Vgb Streptogramin lyase [Defense mechanisms] Back     alignment and domain information
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] Back     alignment and domain information
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species Back     alignment and domain information
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A Back     alignment and domain information
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] Back     alignment and domain information
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] Back     alignment and domain information
>KOG2437 consensus Muskelin [Signal transduction mechanisms] Back     alignment and domain information
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] Back     alignment and domain information
>PTZ00421 coronin; Provisional Back     alignment and domain information
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species Back     alignment and domain information
>PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function Back     alignment and domain information
>PLN00181 protein SPA1-RELATED; Provisional Back     alignment and domain information
>PRK13684 Ycf48-like protein; Provisional Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination Back     alignment and domain information
>PTZ00421 coronin; Provisional Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function Back     alignment and domain information
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A Back     alignment and domain information
>PTZ00420 coronin; Provisional Back     alignment and domain information
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only] Back     alignment and domain information
>COG5184 ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] Back     alignment and domain information
>PTZ00420 coronin; Provisional Back     alignment and domain information
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] Back     alignment and domain information
>PLN00033 photosystem II stability/assembly factor; Provisional Back     alignment and domain information
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto Back     alignment and domain information
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] Back     alignment and domain information
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] Back     alignment and domain information
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A Back     alignment and domain information
>PLN00181 protein SPA1-RELATED; Provisional Back     alignment and domain information
>PRK01742 tolB translocation protein TolB; Provisional Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query535
2wq8_A661 Glycan Labelling Using Engineered Variants Of Galac 2e-13
2eic_A639 Crystal Structure Of Galactose Oxidase Mutant W290f 2e-13
1t2x_A639 Glactose Oxidase C383s Mutant Identified By Directe 6e-13
2eie_A639 Crystal Structure Of Galactose Oxidase Complexed Wi 7e-13
2eib_A639 Crystal Structure Of Galactose Oxidase, W290h Mutan 1e-12
2eid_A639 Galactose Oxidase W290g Mutant Length = 639 1e-12
1k3i_A656 Crystal Structure Of The Precursor Of Galactose Oxi 1e-12
>pdb|2WQ8|A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution Length = 661 Back     alignment and structure 
Iteration: 1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 177/450 (39%), Gaps = 58/450 (12%)
Query: 95  VQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCD-WKEIDGLGARRWYATD 153
            + +++C   ++  +G ++ TGG ND +K         D S D W     +   R Y + 
Sbjct: 244 TKHDMFCPGISMDGNGQIVVTGG-NDAKK-----TSLYDSSSDSWIPGPDMQVARGYQSS 297
Query: 154 HILPDXXXXXXXXXXQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFL 213
             + D           F+   + KNG   VYS      T+ P  + N      L  D   
Sbjct: 298 ATMSDGRVFTIGG--SFSGGVFEKNG--EVYSPSSKTWTSLPNAKVN----PMLTADKQG 349
Query: 214 FIFANNRAILFDYVNNKVVKQYPAIP--------GGDPRS----YPSSGSAVLLPLKN-L 260
              ++N A LF +    V +  P+           GD +S      + G A      N +
Sbjct: 350 LYKSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAV 409
Query: 261 LAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGD 320
           +  +V  ++L  GG+P      A     +  L        T P   +    +   R    
Sbjct: 410 MYDAVKGKILTFGGSPDYTDSDATTNAHIITLGEPG----TSPNTVFASNGLYFARTFHT 465
Query: 321 MTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHST 380
             +LP+G+  +  G  +G    +    PV  P +Y P+      F  QNP++I R YHS 
Sbjct: 466 SVVLPDGSTFITGGQRRGIIFED--STPVFTPEIYVPEQ---DTFYKQNPNSIVRAYHSI 520
Query: 381 AVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANL--RPTIVLPESQ 438
           ++LL DGRV  GG          G         + F+P YL     NL  RP I    +Q
Sbjct: 521 SLLLPDGRVFNGGG------GLCGDCTTNHFDAQIFTPNYLYDSNGNLATRPKITRTSTQ 574
Query: 439 FTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGY 498
                  K   R + S   +++K ++     +  TH+ + +QR + L   T+T  G + Y
Sbjct: 575 -----SVKVGGRITISTDSSISKASLIRYGTA--THTVNTDQRRIPL---TLTNNGGNSY 624
Query: 499 EIVVNSPGSGNLAPSGYYLLFVVHQ-DVPS 527
              V  P    +A  GY++LFV++   VPS
Sbjct: 625 SFQV--PSDSGVALPGYWMLFVMNSAGVPS 652
>pdb|2EIC|A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f Length = 639 Back     alignment and structure
>pdb|1T2X|A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution Length = 639 Back     alignment and structure
>pdb|2EIE|A Chain A, Crystal Structure Of Galactose Oxidase Complexed With Azide Length = 639 Back     alignment and structure
>pdb|2EIB|A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant Length = 639 Back     alignment and structure
>pdb|2EID|A Chain A, Galactose Oxidase W290g Mutant Length = 639 Back     alignment and structure
>pdb|1K3I|A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase Length = 656 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query535
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 1e-96
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 2e-06
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 3e-05
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Length = 656 Back     alignment and structure
 Score =  306 bits (784), Expect = 1e-96
 Identities = 99/472 (20%), Positives = 176/472 (37%), Gaps = 50/472 (10%)

Query: 76  CTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDES 135
            T+     + + ++      + +++C   ++  +G ++ TGG     KK   +   +   
Sbjct: 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN--DAKKTSLYDSSS--- 274

Query: 136 CDWKEIDGLGARRWYATDHILPDGRIIIIGGRR-----QFNYEFYPK-----NGAPNVYS 185
             W     +   R Y +   + DGR+  IGG       + N E Y          PN   
Sbjct: 275 DSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKV 334

Query: 186 LPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRS 245
            P L         ++ + ++F    G +F    + A+ + Y +     +       +   
Sbjct: 335 NPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGV 394

Query: 246 YPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTP 305
            P       +    ++  +V  ++L  GG+P      A     +  L        T P  
Sbjct: 395 AP-----DAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG----TSPNT 445

Query: 306 TWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRF 365
            +    +   R      +LP+G+  +  G  +G         PV  P +Y P+      F
Sbjct: 446 VFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE--DSTPVFTPEIYVPE---QDTF 500

Query: 366 DLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPF 425
             QNP++I R+YHS ++LL DGRV  GG                    + F+P YL    
Sbjct: 501 YKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDC------TTNHFDAQIFTPNYLYNSN 554

Query: 426 ANL--RPTIVLPESQFTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTHSFSMNQRLL 483
            NL  RP I    +Q ++K   +  +   +S          +++     TH+ + +QR +
Sbjct: 555 GNLATRPKITRTSTQ-SVKVGGRITISTDSS------ISKASLIRYGTATHTVNTDQRRI 607

Query: 484 VLASDTVTKLGNSGYEIVVNSPGSGNLAPSGYYLLFVVHQD-VPSEGIWVHV 534
            L   T+T   N G       P    +A  GY++LFV++   VPS    + V
Sbjct: 608 PL---TLT--NNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRV 654
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query535
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 100.0
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 100.0
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 100.0
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 100.0
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 100.0
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 100.0
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 100.0
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 100.0
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 100.0
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 100.0
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 100.0
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.98
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 99.98
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 99.96
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 99.96
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 99.96
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 99.95
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 99.91
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 98.35
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 98.14
4ery_A312 WD repeat-containing protein 5; WD40, WIN motif, b 98.11
3ow8_A321 WD repeat-containing protein 61; structural genomi 98.01
1got_B340 GT-beta; complex (GTP-binding/transducer), G prote 97.91
1k8k_C372 P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- 97.9
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 97.81
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 97.77
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 97.73
1gxr_A337 ESG1, transducin-like enhancer protein 1; transcri 97.73
2hes_X330 YDR267CP; beta-propeller, WD40 repeat, biosyntheti 97.7
2pbi_B354 Guanine nucleotide-binding protein subunit beta 5; 97.69
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 97.68
2ynn_A304 Coatomer subunit beta'; protein transport, peptide 97.67
3zwl_B369 Eukaryotic translation initiation factor 3 subuni; 97.64
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 97.63
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 97.63
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 97.63
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 97.62
1rwi_B270 Serine/threonine-protein kinase PKND; beta propell 97.62
3vl1_A420 26S proteasome regulatory subunit RPN14; beta-prop 97.6
1vyh_C410 Platelet-activating factor acetylhydrolase IB alph 97.58
1gxr_A337 ESG1, transducin-like enhancer protein 1; transcri 97.57
2qc5_A300 Streptogramin B lactonase; beta propeller, lyase; 97.56
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 97.56
4aez_A401 CDC20, WD repeat-containing protein SLP1; cell cyc 97.51
3vl1_A420 26S proteasome regulatory subunit RPN14; beta-prop 97.49
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 97.46
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 97.44
1got_B340 GT-beta; complex (GTP-binding/transducer), G prote 97.44
4e54_B435 DNA damage-binding protein 2; beta barrel, double 97.43
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 97.43
3jrp_A379 Fusion protein of protein transport protein SEC13 97.38
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 97.38
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 97.35
3dwl_C377 Actin-related protein 2/3 complex subunit 1; prope 97.34
2aq5_A402 Coronin-1A; WD40 repeat, 7-bladed beta-propeller, 97.24
3mkq_A 814 Coatomer beta'-subunit; beta-propeller, alpha-sole 97.21
3ei3_B383 DNA damage-binding protein 2; UV-damage, DDB, nucl 97.21
3ow8_A321 WD repeat-containing protein 61; structural genomi 97.2
3iz6_a380 40S ribosomal protein RACK1 (RACK1); eukaryotic ri 97.2
2pbi_B354 Guanine nucleotide-binding protein subunit beta 5; 97.17
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 97.17
2ymu_A577 WD-40 repeat protein; unknown function, two domain 97.15
3odt_A313 Protein DOA1; ubiquitin, nuclear protein; HET: MSE 97.15
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 97.15
4g56_B357 MGC81050 protein; protein arginine methyltransfera 97.13
1pgu_A 615 Actin interacting protein 1; WD repeat, seven-blad 97.11
3jro_A 753 Fusion protein of protein transport protein SEC13 97.11
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 97.1
1erj_A393 Transcriptional repressor TUP1; beta-propeller, tr 97.06
1r5m_A425 SIR4-interacting protein SIF2; transcription corep 97.06
4gga_A420 P55CDC, cell division cycle protein 20 homolog; ce 97.06
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 97.05
2pm7_B297 Protein transport protein SEC13, protein transport 97.05
2ovr_B445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 97.05
1p22_A435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 97.01
1nir_A543 Nitrite reductase; hemoprotein, denitrification, d 96.99
1nr0_A611 Actin interacting protein 1; beta propeller, WD40 96.99
2ymu_A577 WD-40 repeat protein; unknown function, two domain 96.98
3v7d_B464 Cell division control protein 4; WD 40 domain, pho 96.95
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 96.94
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 96.93
3sfz_A1249 APAF-1, apoptotic peptidase activating factor 1; a 96.93
1r5m_A425 SIR4-interacting protein SIF2; transcription corep 96.91
3i2n_A357 WD repeat-containing protein 92; WD40 repeats, str 96.91
3mmy_A368 MRNA export factor; mRNA export, nuclear protein; 96.84
3v7d_B464 Cell division control protein 4; WD 40 domain, pho 96.82
3sfz_A 1249 APAF-1, apoptotic peptidase activating factor 1; a 96.82
1k8k_C372 P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- 96.81
1nr0_A 611 Actin interacting protein 1; beta propeller, WD40 96.77
4ggc_A318 P55CDC, cell division cycle protein 20 homolog; ce 96.77
2ynn_A304 Coatomer subunit beta'; protein transport, peptide 96.75
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 96.75
3v9f_A781 Two-component system sensor histidine kinase/RESP 96.72
2ojh_A297 Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 96.7
3fvz_A329 Peptidyl-glycine alpha-amidating monooxygenase; be 96.7
2ovr_B445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 96.68
2xbg_A327 YCF48-like protein; photosynthesis, photosystem II 96.68
2pm9_A416 Protein WEB1, protein transport protein SEC31; bet 96.67
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 96.65
4h5i_A365 Guanine nucleotide-exchange factor SEC12; copii ve 96.63
3dm0_A694 Maltose-binding periplasmic protein fused with RAC 96.63
4gqb_B344 Methylosome protein 50; TIM barrel, beta-propeller 96.62
3frx_A319 Guanine nucleotide-binding protein subunit beta- l 96.61
1sq9_A397 Antiviral protein SKI8; WD repeat, beta-transducin 96.6
4a2l_A795 BT_4663, two-component system sensor histidine kin 96.59
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 96.58
3iz6_a380 40S ribosomal protein RACK1 (RACK1); eukaryotic ri 96.58
3lrv_A343 PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu 96.55
4aez_A401 CDC20, WD repeat-containing protein SLP1; cell cyc 96.54
3bg1_A316 Protein SEC13 homolog; NPC, transport, WD repeat, 96.49
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 96.49
2xbg_A327 YCF48-like protein; photosynthesis, photosystem II 96.37
3mkq_A 814 Coatomer beta'-subunit; beta-propeller, alpha-sole 96.36
3k26_A366 Polycomb protein EED; WD40, structural genomics, N 96.33
2pm7_B297 Protein transport protein SEC13, protein transport 96.3
3zwl_B369 Eukaryotic translation initiation factor 3 subuni; 96.24
1vyh_C410 Platelet-activating factor acetylhydrolase IB alph 96.2
2pm9_A416 Protein WEB1, protein transport protein SEC31; bet 96.15
2xzm_R343 RACK1; ribosome, translation; 3.93A {Tetrahymena t 96.14
4a11_B408 DNA excision repair protein ERCC-8; DNA binding pr 96.13
1nir_A543 Nitrite reductase; hemoprotein, denitrification, d 96.05
4ery_A312 WD repeat-containing protein 5; WD40, WIN motif, b 96.03
3jrp_A379 Fusion protein of protein transport protein SEC13 96.0
3k26_A366 Polycomb protein EED; WD40, structural genomics, N 95.91
3mbr_X243 Glutamine cyclotransferase; beta-propeller; 1.44A 95.85
4aow_A340 Guanine nucleotide-binding protein subunit beta-2; 95.83
1yfq_A342 Cell cycle arrest protein BUB3; WD repeat WD40 rep 95.83
3nol_A262 Glutamine cyclotransferase; beta-propeller, glutam 95.79
1sq9_A397 Antiviral protein SKI8; WD repeat, beta-transducin 95.77
3dwl_C377 Actin-related protein 2/3 complex subunit 1; prope 95.72
4e54_B435 DNA damage-binding protein 2; beta barrel, double 95.71
3dw8_B447 Serine/threonine-protein phosphatase 2A 55 kDa RE 95.66
1pby_B337 Quinohemoprotein amine dehydrogenase 40 kDa subuni 95.57
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 95.54
3dm0_A694 Maltose-binding periplasmic protein fused with RAC 95.48
1pgu_A615 Actin interacting protein 1; WD repeat, seven-blad 95.44
3bg1_A316 Protein SEC13 homolog; NPC, transport, WD repeat, 95.4
4d9s_A406 UVB-resistance protein UVR8; UV resistance, UV-B p 95.34
4g56_B357 MGC81050 protein; protein arginine methyltransfera 95.25
3f3f_A351 Nucleoporin SEH1; structural protein, protein comp 95.14
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 95.13
4gga_A420 P55CDC, cell division cycle protein 20 homolog; ce 95.09
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 95.06
3mbr_X243 Glutamine cyclotransferase; beta-propeller; 1.44A 95.03
3i2n_A357 WD repeat-containing protein 92; WD40 repeats, str 95.0
1erj_A393 Transcriptional repressor TUP1; beta-propeller, tr 94.96
3odt_A313 Protein DOA1; ubiquitin, nuclear protein; HET: MSE 94.9
1p22_A435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 94.81
3e5z_A296 Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco 94.81
1jmx_B349 Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 94.72
4a11_B408 DNA excision repair protein ERCC-8; DNA binding pr 94.65
1rwi_B270 Serine/threonine-protein kinase PKND; beta propell 94.56
1jof_A365 Carboxy-CIS,CIS-muconate cyclase; beta-propeller, 94.42
1jmx_B349 Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 94.41
1pjx_A314 Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries 94.33
3jro_A 753 Fusion protein of protein transport protein SEC13 94.28
3lrv_A343 PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu 94.27
3ei3_B383 DNA damage-binding protein 2; UV-damage, DDB, nucl 94.25
3gre_A437 Serine/threonine-protein kinase VPS15; seven-blade 94.02
3fvz_A329 Peptidyl-glycine alpha-amidating monooxygenase; be 93.8
3hrp_A409 Uncharacterized protein; NP_812590.1, structural g 93.69
2ecf_A 741 Dipeptidyl peptidase IV; prolyl oligopeptidase fam 93.56
2bkl_A695 Prolyl endopeptidase; mechanistic study, celiac sp 93.48
4h5i_A365 Guanine nucleotide-exchange factor SEC12; copii ve 93.45
3nol_A262 Glutamine cyclotransferase; beta-propeller, glutam 93.39
2qc5_A300 Streptogramin B lactonase; beta propeller, lyase; 93.26
1pjx_A314 Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries 93.24
4gqb_B344 Methylosome protein 50; TIM barrel, beta-propeller 93.17
3vu4_A355 KMHSV2; beta-propeller fold, protein transport; 2. 93.03
2xzm_R343 RACK1; ribosome, translation; 3.93A {Tetrahymena t 93.02
2aq5_A402 Coronin-1A; WD40 repeat, 7-bladed beta-propeller, 93.0
2hes_X330 YDR267CP; beta-propeller, WD40 repeat, biosyntheti 92.88
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 92.69
2p4o_A306 Hypothetical protein; putative lactonase, structur 92.67
3nok_A268 Glutaminyl cyclase; beta-propeller, cyclotransfera 92.64
3e5z_A296 Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco 92.56
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 92.38
3nok_A268 Glutaminyl cyclase; beta-propeller, cyclotransfera 91.82
2xyi_A430 Probable histone-binding protein CAF1; transcripti 91.8
2vdu_B450 TRNA (guanine-N(7)-)-methyltransferase- associated 91.31
4aow_A340 Guanine nucleotide-binding protein subunit beta-2; 91.08
2ecf_A 741 Dipeptidyl peptidase IV; prolyl oligopeptidase fam 91.02
1yfq_A342 Cell cycle arrest protein BUB3; WD repeat WD40 rep 90.64
3g4e_A297 Regucalcin; six bladed beta-propeller, gluconolcat 90.53
3mmy_A368 MRNA export factor; mRNA export, nuclear protein; 90.48
3sjl_D386 Methylamine dehydrogenase heavy chain; MAUG, C-hem 90.32
1qks_A567 Cytochrome CD1 nitrite reductase; enzyme, oxidored 89.96
3v9f_A781 Two-component system sensor histidine kinase/RESP 89.32
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 89.23
2fp8_A322 Strictosidine synthase; six bladed beta propeller 88.73
1pby_B337 Quinohemoprotein amine dehydrogenase 40 kDa subuni 88.27
3vu4_A355 KMHSV2; beta-propeller fold, protein transport; 2. 87.28
3o4h_A 582 Acylamino-acid-releasing enzyme; alpha/beta hydrol 87.14
3dr2_A305 Exported gluconolactonase; gluconolactonase SMP-30 87.14
4ggc_A318 P55CDC, cell division cycle protein 20 homolog; ce 87.09
3g4e_A297 Regucalcin; six bladed beta-propeller, gluconolcat 86.98
2p9w_A334 MAL S 1 allergenic protein; beta propeller; 1.35A 85.54
2vdu_B450 TRNA (guanine-N(7)-)-methyltransferase- associated 85.44
3pe7_A388 Oligogalacturonate lyase; seven-bladed beta-propel 85.24
3frx_A319 Guanine nucleotide-binding protein subunit beta- l 84.62
1tl2_A236 L10, protein (tachylectin-2); animal lectin, horse 83.76
2oaj_A 902 Protein SNI1; WD40 repeat, beta propeller, endocyt 81.47
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
Probab=100.00  E-value=3e-74  Score=643.95  Aligned_cols=447  Identities=23%  Similarity=0.351  Sum_probs=349.1

Q ss_pred             cccCCCceEEcccCCCcceeEEEEee-CCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc---c
Q 009420           22 TDAAGGGWQLLQKSIGISSMHMQLLN-NDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ---S   97 (535)
Q Consensus        22 ~~~~~g~W~~l~~~~~~~~~~~~~~~-~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~---~   97 (535)
                      -++..++|+.+.+++. +..|+++++ +||||++||.+..  ...   +   .......+.+|||.+++|++++.+   +
T Consensus       171 ~dp~~~~W~~~~~~P~-~~~~~av~~~~g~l~v~GG~~~~--~~~---~---~~~~~~~~~~yd~~t~~w~~~~~~~~~~  241 (656)
T 1k3i_A          171 PQPGLGRWGPTIDLPI-VPAAAAIEPTSGRVLMWSSYRND--AFG---G---SPGGITLTSSWDPSTGIVSDRTVTVTKH  241 (656)
T ss_dssp             CCTTSCEEEEEEECSS-CCSEEEEETTTTEEEEEEECCCT--TTC---S---CCCSEEEEEEECTTTCCBCCCEEEECSC
T ss_pred             CCCCCCeeeeeccCCC-CceeEEEEecCCEEEEEeccccc--ccc---c---CCCCeEEEEEEeCCCCcEEeCcccCCCC
Confidence            4678899999988764 566777777 9999999997521  110   0   000234689999999999998754   5


Q ss_pred             ccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCc-cC----Cee
Q 009420           98 NVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGR-RQ----FNY  172 (535)
Q Consensus        98 ~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~-~~----~~~  172 (535)
                      ..+|++++++.||+||++||...  .++++|||.   +++|+++++|+.+||+|+++++.||+|||+||. +.    .++
T Consensus       242 ~~~~~~~~~~~~g~lyv~GG~~~--~~v~~yd~~---t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~  316 (656)
T 1k3i_A          242 DMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSS---SDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNG  316 (656)
T ss_dssp             CCSSCEEEECTTSCEEEECSSST--TCEEEEEGG---GTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCE
T ss_pred             CCccccccCCCCCCEEEeCCCCC--CceEEecCc---CCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccc
Confidence            67888888888999999999754  479999999   899999999999999999999989999999995 32    468


Q ss_pred             EEE-eCCCCCCeeeec------cccccCCccccCCCcceEEEeeCCcEEEEec-----------CeEEEEECCCCeEEEe
Q 009420          173 EFY-PKNGAPNVYSLP------FLVQTNDPRVENNLYPFVFLNVDGFLFIFAN-----------NRAILFDYVNNKVVKQ  234 (535)
Q Consensus       173 E~y-P~~~~~~w~~~~------~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg-----------~~~~~yDp~t~~W~~~  234 (535)
                      |+| |.++  +|..++      ++...         . +..+..+++||++|+           ..+++||+++++|...
T Consensus       317 e~yd~~t~--~W~~~~~~~~~p~~~~~---------~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~  384 (656)
T 1k3i_A          317 EVYSPSSK--TWTSLPNAKVNPMLTAD---------K-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKS  384 (656)
T ss_dssp             EEEETTTT--EEEEETTSCSGGGCCCC---------T-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEE
T ss_pred             eEeCCCCC--cceeCCCcccccccccc---------c-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeec
Confidence            999 7764  787642      22110         0 112235788888875           3478999999999853


Q ss_pred             cCCCCCCC-CCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCC---ceEEEEecCCCCCeeee
Q 009420          235 YPAIPGGD-PRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALN---TCARIKITDPTPTWVLE  310 (535)
Q Consensus       235 ~p~~p~~~-~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~---s~e~~d~~~~~~~W~~~  310 (535)
                      ....+... ....+..++++|++.       .+++||++||.+....        ..+++   ++++||+..  ++|+..
T Consensus       385 ~~~~~~~~~~~~~~~~~~av~~~~-------~~~~i~v~GG~~~~~~--------~~~~~~~~~v~~yd~~~--~~W~~~  447 (656)
T 1k3i_A          385 AGKRQSNRGVAPDAMCGNAVMYDA-------VKGKILTFGGSPDYQD--------SDATTNAHIITLGEPGT--SPNTVF  447 (656)
T ss_dssp             EEECEETTEECCCCBTCEEEEEET-------TTTEEEEECCBSSSSS--------SBCCCCEEEEECCSTTS--CCEEEE
T ss_pred             CCccccccccCCCCCCCceEeccC-------CCCeEEEEeCCCCCCC--------CCcCCcceEEEcCCCCC--CCeeEE
Confidence            32111100 000123467777663       4899999999742110        02344   566777764  789874


Q ss_pred             ---cCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCC
Q 009420          311 ---TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDG  387 (535)
Q Consensus       311 ---~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG  387 (535)
                         +|+.+|.++++++++||+|||+||...+. +|. +.+++.++|+|||+++   +|+.+++|+.+|.+|+++++++||
T Consensus       448 ~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ydp~t~---~W~~~~~~~~~R~~hs~a~ll~dg  522 (656)
T 1k3i_A          448 ASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEIYVPEQD---TFYKQNPNSIVRVYHSISLLLPDG  522 (656)
T ss_dssp             CTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEEEEGGGT---EEEECCCCSSCCCTTEEEEECTTS
T ss_pred             ccCCCCCCcccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEEEcCCCC---ceeecCCCCCccccccHhhcCCCc
Confidence               89999999999999999999999976432 222 3456778999999999   999999999999999999999999


Q ss_pred             cEEEecCCCCccccccCCCCCceeeEEEEcCCCCCCC--CCCCCCceec-CCCccccccCCeEEEEEEecCccccceEEE
Q 009420          388 RVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAP--FANLRPTIVL-PESQFTLKYKQKFRVRFSASGPVALNKVTV  464 (535)
Q Consensus       388 ~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppyl~~~--~~~~RP~i~~-~p~~~~~~~g~~~~v~~~~~~~~~~~~~~~  464 (535)
                      +|||+||+.+..+.      ++++++|+|+||||+++  ..+.||+|++ +|++  +.||++|+|+++.      .+.+|
T Consensus       523 ~v~v~GG~~~~~~~------~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~~~~--~~~g~~~~~~~~~------~~~~~  588 (656)
T 1k3i_A          523 RVFNGGGGLCGDCT------TNHFDAQIFTPNYLYNSNGNLATRPKITRTSTQS--VKVGGRITISTDS------SISKA  588 (656)
T ss_dssp             CEEEEECCCCTTCS------CCCCEEEEEECGGGBCTTSSBCCCCCEEEESCSE--EETTCEEEEEESS------CCSEE
T ss_pred             EEEecCCCCCCCCC------CCeeEEEEEeChhhccCCCCcCCCCcccccCCce--ecCCCEEEEEEec------cceEE
Confidence            99999998776432      35889999999999863  5567999999 5888  9999999999862      35689


Q ss_pred             EEEecCCccccCCCCcceEEeeeeeeeecCCcceEEEEEcCCCCCcCCCcceEEEEEc-CCcCCccEEEEeC
Q 009420          465 TMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGYEIVVNSPGSGNLAPSGYYLLFVVH-QDVPSEGIWVHVQ  535 (535)
Q Consensus       465 ~l~~~~~~TH~~~~~qR~v~L~~~~~~~~g~~~~~~~~~~P~~~~~~ppG~ymlf~~~-~gvPS~a~~v~i~  535 (535)
                      +|+|++|+||++||+||+|+|+++.   .|  .++++|++|||++|||||||||||++ +||||+|+||+|+
T Consensus       589 ~l~~~~~~th~~~~~qr~~~l~~~~---~~--~~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps~~~~v~~~  655 (656)
T 1k3i_A          589 SLIRYGTATHTVNTDQRRIPLTLTN---NG--GNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRVT  655 (656)
T ss_dssp             EEEECCEEETTBCSSCCEEECCEEE---EE--TTEEEEECCSCTTTSCSEEEEEEEECTTSCBCCCEEEEEE
T ss_pred             EEEecCccccCcCCCCcEEecceEe---cC--CCEEEEECCCCCCcCCCcCeEEEEECCCCcccccEEEEEe
Confidence            9999999999999999999999985   23  24889999999999999999999996 9999999999984
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... Back     alignment and structure
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Back     alignment and structure
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Back     alignment and structure
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Back     alignment and structure
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Back     alignment and structure
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A Back     alignment and structure
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A Back     alignment and structure
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Back     alignment and structure
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Back     alignment and structure
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Back     alignment and structure
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Back     alignment and structure
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Back     alignment and structure
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Back     alignment and structure
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A Back     alignment and structure
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Back     alignment and structure
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Back     alignment and structure
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Back     alignment and structure
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} Back     alignment and structure
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} Back     alignment and structure
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Back     alignment and structure
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Back     alignment and structure
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Back     alignment and structure
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Back     alignment and structure
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Back     alignment and structure
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Back     alignment and structure
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Back     alignment and structure
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Back     alignment and structure
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Back     alignment and structure
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Back     alignment and structure
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Back     alignment and structure
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} Back     alignment and structure
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} Back     alignment and structure
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Back     alignment and structure
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} Back     alignment and structure
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A Back     alignment and structure
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Back     alignment and structure
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} Back     alignment and structure
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Back     alignment and structure
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Back     alignment and structure
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Back     alignment and structure
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Back     alignment and structure
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} Back     alignment and structure
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A Back     alignment and structure
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Back     alignment and structure
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Back     alignment and structure
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Back     alignment and structure
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Back     alignment and structure
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... Back     alignment and structure
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Back     alignment and structure
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} Back     alignment and structure
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Back     alignment and structure
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Back     alignment and structure
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A Back     alignment and structure
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Back     alignment and structure
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Back     alignment and structure
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Back     alignment and structure
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Back     alignment and structure
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Back     alignment and structure
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Back     alignment and structure
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Back     alignment and structure
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} Back     alignment and structure
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} Back     alignment and structure
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Back     alignment and structure
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Back     alignment and structure
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Back     alignment and structure
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} Back     alignment and structure
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* Back     alignment and structure
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Back     alignment and structure
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A Back     alignment and structure
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 Back     alignment and structure
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* Back     alignment and structure
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... Back     alignment and structure
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Back     alignment and structure
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* Back     alignment and structure
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Back     alignment and structure
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} Back     alignment and structure
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A Back     alignment and structure
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A Back     alignment and structure
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Back     alignment and structure
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... Back     alignment and structure
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} Back     alignment and structure
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Back     alignment and structure
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Back     alignment and structure
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Back     alignment and structure
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 Back     alignment and structure
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} Back     alignment and structure
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} Back     alignment and structure
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Back     alignment and structure
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Back     alignment and structure
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Back     alignment and structure
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Back     alignment and structure
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B Back     alignment and structure
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Back     alignment and structure
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... Back     alignment and structure
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* Back     alignment and structure
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* Back     alignment and structure
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* Back     alignment and structure
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Back     alignment and structure
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A Back     alignment and structure
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} Back     alignment and structure
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} Back     alignment and structure
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B Back     alignment and structure
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} Back     alignment and structure
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} Back     alignment and structure
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Back     alignment and structure
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* Back     alignment and structure
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 535
d1k3ia3387 b.69.1.1 (A:151-537) Galactose oxidase, central do 5e-32
d1k3ia1102 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal 1e-23
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 Back     information, alignment and structure

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

 Score =  124 bits (312), Expect = 5e-32
 Identities = 73/413 (17%), Positives = 131/413 (31%), Gaps = 50/413 (12%)

Query: 24  AAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEY 83
              G W        + +       + RV+M+          S              +  +
Sbjct: 6   PGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGS--------PGGITLTSSW 57

Query: 84  SVLTNEFR---PLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKE 140
              T           + +++C   ++  +G ++ TGG +      +     +  S  W  
Sbjct: 58  DPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSDSWIP 112

Query: 141 IDGLGARRWYATDHILPDGRIIIIGGRRQFN------YEFYPKNGA----PNVYSLPFLV 190
              +   R Y +   + DGR+  IGG             + P +      PN    P L 
Sbjct: 113 GPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLT 172

Query: 191 QTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRSYPS-- 248
                   ++ + ++F    G +F    + A+ + Y +     +       +    P   
Sbjct: 173 ADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAM 232

Query: 249 SGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWV 308
            G+AV+                       G+ +  +      A         T P   + 
Sbjct: 233 CGNAVMYDAVK-----------GKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA 281

Query: 309 LETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQ 368
              +   R      +LP+G+  +  G  +G         PV  P +Y P+      F  Q
Sbjct: 282 SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE--DSTPVFTPEIYVPEQ---DTFYKQ 336

Query: 369 NPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYL 421
           NP++I R+YHS ++LL DGRV  GG          G         + F+P YL
Sbjct: 337 NPNSIVRVYHSISLLLPDGRVFNGGGGLC------GDCTTNHFDAQIFTPNYL 383
>d1k3ia1 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 102 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query535
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 100.0
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 100.0
d1k3ia1102 Galactose oxidase, C-terminal domain {Fungi (Fusar 100.0
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 99.96
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 99.95
d1nr0a2299 Actin interacting protein 1 {Nematode (Caenorhabdi 98.01
d1nr0a1311 Actin interacting protein 1 {Nematode (Caenorhabdi 97.75
d1tbga_340 beta1-subunit of the signal-transducing G protein 97.51
d1nr0a1311 Actin interacting protein 1 {Nematode (Caenorhabdi 97.44
d1l0qa2301 Surface layer protein {Archaeon Methanosarcina maz 97.33
d1gxra_337 Groucho/tle1, C-terminal domain {Human (Homo sapie 97.29
d1k8kc_371 Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur 97.18
d1jmxb_346 Quinohemoprotein amine dehydrogenase B chain {Pseu 97.08
d1l0qa2301 Surface layer protein {Archaeon Methanosarcina maz 97.01
d1k8kc_371 Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur 96.74
d1nr0a2299 Actin interacting protein 1 {Nematode (Caenorhabdi 96.73
d1gxra_337 Groucho/tle1, C-terminal domain {Human (Homo sapie 96.52
d1vyhc1317 Platelet-activating factor acetylhydrolase IB subu 96.44
d1erja_388 Tup1, C-terminal domain {Baker's yeast (Saccharomy 96.41
d2p4oa1302 Hypothetical protein All0351 homologue {Nostoc pun 96.38
d1rwia_260 Serine/threonine-protein kinase PknD {Mycobacteriu 96.0
d1rwia_260 Serine/threonine-protein kinase PknD {Mycobacteriu 95.96
d1pbyb_337 Quinohemoprotein amine dehydrogenase B chain {Para 95.94
d1q7fa_279 Brain tumor cg10719-pa {Fruit fly (Drosophila mela 95.46
d1ri6a_333 Putative isomerase YbhE {Escherichia coli [TaxId: 95.4
d1pjxa_314 Diisopropylfluorophosphatase (phosphotriesterase, 95.06
d1q7fa_279 Brain tumor cg10719-pa {Fruit fly (Drosophila mela 94.99
d1erja_388 Tup1, C-terminal domain {Baker's yeast (Saccharomy 94.77
d2ovrb2342 F-box/WD repeat-containing protein 7, FBXW7 {Human 94.76
d1k32a3360 Tricorn protease domain 2 {Archaeon Thermoplasma a 93.77
d1nexb2355 Cdc4 propeller domain {Baker's yeast (Saccharomyce 93.58
d1pgua1325 Actin interacting protein 1 {Baker's yeast (Saccha 92.92
d1yfqa_342 Cell cycle arrest protein BUB3 {Baker's yeast (Sac 92.85
d1k32a3360 Tricorn protease domain 2 {Archaeon Thermoplasma a 92.62
d1tbga_340 beta1-subunit of the signal-transducing G protein 92.43
d1qksa2432 C-terminal (heme d1) domain of cytochrome cd1-nitr 92.1
d1qksa2432 C-terminal (heme d1) domain of cytochrome cd1-nitr 90.96
d2ovrb2342 F-box/WD repeat-containing protein 7, FBXW7 {Human 90.8
d2p4oa1302 Hypothetical protein All0351 homologue {Nostoc pun 90.36
d1mdah_368 Methylamine dehydrogenase, H-chain {Paracoccus den 89.86
d2dg1a1319 Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 89.77
d1jmxb_346 Quinohemoprotein amine dehydrogenase B chain {Pseu 89.76
d1p22a2293 F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom 89.74
d1ri6a_333 Putative isomerase YbhE {Escherichia coli [TaxId: 88.69
d1vyhc1317 Platelet-activating factor acetylhydrolase IB subu 88.47
d1nexb2355 Cdc4 propeller domain {Baker's yeast (Saccharomyce 87.25
d2dg1a1319 Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 85.15
d2ghsa1295 Regucalcin {Agrobacterium tumefaciens [TaxId: 358] 83.66
d1mdah_368 Methylamine dehydrogenase, H-chain {Paracoccus den 82.0
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=100.00  E-value=3.1e-49  Score=407.72  Aligned_cols=361  Identities=23%  Similarity=0.343  Sum_probs=267.3

Q ss_pred             cccCCCceEEcccCCCcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcc---ccc
Q 009420           22 TDAAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFV---QSN   98 (535)
Q Consensus        22 ~~~~~g~W~~l~~~~~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~---~~~   98 (535)
                      +++..|+|+...+++..+..++++..+||||++||...  ....-..+      ....+++|||++++|++++.   .+.
T Consensus         4 ~~p~~g~W~~~~~~p~~~~~~a~~~~~gkv~v~GG~~~--~~~~~~~~------~~~~~~~yd~~t~~w~~~~~~~~~~~   75 (387)
T d1k3ia3           4 PQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRN--DAFGGSPG------GITLTSSWDPSTGIVSDRTVTVTKHD   75 (387)
T ss_dssp             CCTTSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCC--TTTCSCCC------SEEEEEEECTTTCCBCCCEEEECSCC
T ss_pred             CCCCCCccCCcCCCCccccEEEEEeeCCEEEEEEeecC--cccCCCCC------ceeEEEEEECCCCcEeecCCCCCCcc
Confidence            45778999998887755554555556999999999742  11110011      24568899999999998753   357


Q ss_pred             cccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccC-----CeeE
Q 009420           99 VWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQ-----FNYE  173 (535)
Q Consensus        99 ~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~-----~~~E  173 (535)
                      ++|++++++.||+||++||..  .+++++|||.   +++|+++++|+.+||+|+++++.||+||++||...     .++|
T Consensus        76 ~~~~~~~~~~~g~i~v~Gg~~--~~~~~~yd~~---~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~  150 (387)
T d1k3ia3          76 MFCPGISMDGNGQIVVTGGND--AKKTSLYDSS---SDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGE  150 (387)
T ss_dssp             CSSCEEEECTTSCEEEECSSS--TTCEEEEEGG---GTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEE
T ss_pred             cceeEEEEecCCcEEEeecCC--CcceeEecCc---cCcccccccccccccccceeeecCCceeeeccccccccccceee
Confidence            799999999999999999974  4789999999   99999999999999999999999999999999753     3689


Q ss_pred             EE-eCCCCCCeeeecccccc----CCc--cccCCCcceEEEeeCCcEEEEecC--eEEEEECCCCeEEEecCCCCCCCC-
Q 009420          174 FY-PKNGAPNVYSLPFLVQT----NDP--RVENNLYPFVFLNVDGFLFIFANN--RAILFDYVNNKVVKQYPAIPGGDP-  243 (535)
Q Consensus       174 ~y-P~~~~~~w~~~~~l~~~----~~~--~~~~~~yp~~~~~~dG~ifv~gg~--~~~~yDp~t~~W~~~~p~~p~~~~-  243 (535)
                      +| |.++  +|..++.+...    ...  ....+.|+..+...+|++|+.|+.  ..+.||+.++.|.. .+.++.... 
T Consensus       151 ~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  227 (387)
T d1k3ia3         151 VYSPSSK--TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKS-AGKRQSNRGV  227 (387)
T ss_dssp             EEETTTT--EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEE-EEECEETTEE
T ss_pred             eecCCCC--ceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEee-ccccccCccc
Confidence            99 7765  88765422110    000  012345788899999999999985  46789999999984 544432100 


Q ss_pred             CCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCC---CCCeeee-cCCCCceec
Q 009420          244 RSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDP---TPTWVLE-TMPQPRVMG  319 (535)
Q Consensus       244 R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~---~~~W~~~-~m~~~R~~~  319 (535)
                      ......+.+++++.       .++|||++||.......        ......+.++....   ..+|+.. +|+.+|.++
T Consensus       228 ~~~~~~~~~~~~~~-------~~g~v~v~GG~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  292 (387)
T d1k3ia3         228 APDAMCGNAVMYDA-------VKGKILTFGGSPDYQDS--------DATTNAHIITLGEPGTSPNTVFASNGLYFARTFH  292 (387)
T ss_dssp             CCCCBTCEEEEEET-------TTTEEEEECCBSSSSSS--------BCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSC
T ss_pred             CcccccccEEEeec-------cCCceEEEEeccCCCCC--------cccceeecccccccccCCCceeeccccccccccc
Confidence            01111355666553       48999999997532211        12233344443332   2356665 999999999


Q ss_pred             eeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCCCcc
Q 009420          320 DMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAY  399 (535)
Q Consensus       320 ~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~~~~  399 (535)
                      ++++++||+|||+||...+...  ....+++++|+|||+++   +|+.+++|+++|.+||+++|++||+|||+||+.+..
T Consensus       293 ~~~~~~dg~i~v~GG~~~~~~~--~~~~~~~~ve~Ydp~~~---~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~~~~~  367 (387)
T d1k3ia3         293 TSVVLPDGSTFITGGQRRGIPF--EDSTPVFTPEIYVPEQD---TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGD  367 (387)
T ss_dssp             EEEECTTSCEEEECCBSBCCTT--CCCSBCCCCEEEEGGGT---EEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTT
T ss_pred             eeeeccCCeEEEECCcccCccC--CCCcEeceEEEEECCCC---eEEECCCCCCcccceEEEEECCCCEEEEEeCCCcCC
Confidence            9999999999999998643321  23456778999999999   999999999999999999999999999999986653


Q ss_pred             ccccCCCCCceeeEEEEcCCCCCCC
Q 009420          400 YNFTGVLFPTELSLEAFSPYYLDAP  424 (535)
Q Consensus       400 ~~~~~~~~~~~~~vE~y~Ppyl~~~  424 (535)
                      .      ..++.++|+|+|||||++
T Consensus       368 ~------~~~~~~~e~y~Ppyl~~~  386 (387)
T d1k3ia3         368 C------TTNHFDAQIFTPNYLYNS  386 (387)
T ss_dssp             C------SCCCCEEEEEECGGGBCT
T ss_pred             C------CcccceEEEEcchhccCC
Confidence            2      235789999999999864
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia1 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Back     information, alignment and structure
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Back     information, alignment and structure
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Back     information, alignment and structure
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} Back     information, alignment and structure
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Back     information, alignment and structure
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure