Citrus Sinensis ID: 009443

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530----
MFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI
ccccEEEccccccccccccccccEEEEEEcccccHHHHHHHHccccccEEEEEccccccccccccccccHHHHHHHcccccccEEEEcccccccccHHHHHHHHHHccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccHHcccccccccccccccccccHHHHHHHHHcccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEcccccccccccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHEEcc
cccccccccccccccccccccccEEEEEEccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEEccccccccccEEEcccHHEEHEHEcccccccccccccccccccccHHHHccccHHHHcccccccccHHHHHHHHHHHHcccccccccccccccEEEcccccHEEEHHHHHccccEEEEEccccHHHcccccccHHHHHHHHHHHHHccEEEEEcccccEEEccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccEEEEcHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccHHHHHEEEEHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHc
MFEEQVMKAVedgeygnsrnhSTIIEIIqdtsgenetiRQADLVEMPLLVYvsrekspehlhhfkGGALNVLLRVSgvisnspyilgldcdmycndptsarqamcfhldpktssslafvqfpqkfhnfnehdiydgslrsgyrlqwpgmdglkgpfltgtghyirreslygnfkhkgidlaelkdtfgesNLFIKSLHQSYehknvngenlSNVLQQETEVLASCSYEhqtkwgeevgFSYQSVSEDFFTGFILHckgwtstyldpsrpqflgtsttnLNDVLIQGTRWASGLIDVSisrfcpllygpsrMSLLLSMCygemslfpllyclplwcfatlpqlcllngiplypevsspffmVFSFIFLSAICKHLQEVIStggsvytwrnEQRIWMIKSVTSHFYGSMDAIMKLLGLrkasflptnkvldneqvkryemgqfdfqtssvFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIvrkdkgrispsaiLLSSVFFVTFLFFGSIILI
MFEEQVMKAVedgeygnsrnhSTIIEIiqdtsgenETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI
MFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAillssvffvtflffgsiiLI
**********************TIIEIIQD*****ETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIIL*
**EEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEH*N*NGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFL************RYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI
MFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI
***EQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI
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MFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query534 2.2.26 [Sep-21-2011]
Q651X7737 Cellulose synthase-like p yes no 0.917 0.664 0.369 8e-98
Q651X6728 Cellulose synthase-like p no no 0.923 0.677 0.374 1e-97
Q8VYR4722 Cellulose synthase-like p yes no 0.900 0.666 0.376 4e-97
Q570S7760 Cellulose synthase-like p no no 0.891 0.626 0.369 8e-94
Q0WVN5751 Cellulose synthase-like p no no 0.919 0.653 0.364 1e-93
Q0DXZ1745 Cellulose synthase-like p no no 0.910 0.652 0.351 2e-92
Q8VZK9729 Cellulose synthase-like p no no 0.883 0.647 0.353 9e-88
Q8LPK5985 Cellulose synthase A cata no no 0.919 0.498 0.327 1e-82
Q69P511055 Cellulose synthase A cata no no 0.956 0.484 0.311 1e-80
A2Z1C81055 Cellulose synthase A cata N/A no 0.956 0.484 0.311 1e-80
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function desciption
 Score =  358 bits (918), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 192/519 (36%), Positives = 296/519 (57%), Gaps = 29/519 (5%)

Query: 19  RNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGV 78
           +NH  I++I+ D  G+N      D   +P +VYV+REK P++ H+FK GALN L+RVS V
Sbjct: 243 KNHQPIVQILID--GKNRNAIDDDRNVLPTMVYVAREKRPQYHHNFKAGALNALIRVSSV 300

Query: 79  ISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSL 138
           IS+SP IL +DCDMY N+  S R A+CF LD +    + FVQ+PQ F+N  ++DIY  S 
Sbjct: 301 ISDSPVILNVDCDMYSNNSDSIRDALCFFLDEEMGQKIGFVQYPQIFNNMTQNDIYGNSF 360

Query: 139 RSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLH 198
              Y ++  G+D + G    GTG + RRE L G                    +F K   
Sbjct: 361 NVSYHVEMCGLDSVGGCLYIGTGCFHRREILCG-------------------RIFSKDYK 401

Query: 199 QSYEH--KNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHC 256
           +++    K    EN+ N ++++   L +C+YEH+T+WG ++G  Y   +ED  TG  +HC
Sbjct: 402 ENWNRGIKERGKENI-NEIEEKATSLVTCTYEHRTQWGNDIGVKYGFPAEDIITGLAIHC 460

Query: 257 KGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLS 316
           +GW S +++P R  FLG + + L   ++Q  RW+ G + + +S++C  L+G  ++ L L 
Sbjct: 461 RGWESAFINPKRAAFLGLAPSTLAQNILQHKRWSEGNLTIFLSKYCSFLFGHGKIKLQLQ 520

Query: 317 MCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQE 376
           M Y    L+     LP   +  +P L L+ G PL+P++ SP+   F ++F       L E
Sbjct: 521 MGYCICGLWA-ANSLPTLYYVVIPSLGLVKGTPLFPQIMSPWATPFIYVFCVKTLYGLYE 579

Query: 377 VISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRY 436
            + +G ++  W N QR+WM+KS+TS+ YG +D I K +G+ K SF  T KV  +++ KRY
Sbjct: 580 ALLSGDTLKGWWNGQRMWMVKSITSYLYGFIDTIRKCVGMSKMSFEVTAKVSGHDEAKRY 639

Query: 437 EMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIA-VGN--WDKLFAQVLLSLYILII 493
           E    +F +SS   V + ++ +LN   LV G+ +++A V N  W+    Q +L   I+II
Sbjct: 640 EQEILEFGSSSPEYVIIATVALLNFVCLVGGLSQIMAGVWNMPWNVFLPQAILCGMIVII 699

Query: 494 NFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSII 532
           N  I E M +RKD GRI P+A+ L+S+ FV   F   I+
Sbjct: 700 NMPIYEAMFLRKDNGRI-PTAVTLASIGFVMLAFLVPIV 737
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function description
>sp|Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1 Back     alignment and function description
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function description
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZK9|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1 Back     alignment and function description
>sp|Q8LPK5|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1 Back     alignment and function description
>sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 Back     alignment and function description
>sp|A2Z1C8|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query534
359477703 733 PREDICTED: cellulose synthase-like prote 0.977 0.712 0.601 0.0
224111028 857 predicted protein [Populus trichocarpa] 0.947 0.590 0.619 0.0
297737188 822 unnamed protein product [Vitis vinifera] 0.923 0.599 0.614 0.0
356548660 736 PREDICTED: cellulose synthase-like prote 0.962 0.698 0.597 0.0
429326514 723 cellulose synthase-like protein [Populus 0.966 0.713 0.583 0.0
224111026 723 predicted protein [Populus trichocarpa] 0.966 0.713 0.582 0.0
255576870 762 cellulose synthase, putative [Ricinus co 0.941 0.660 0.597 1e-179
356535446 740 PREDICTED: cellulose synthase-like prote 0.964 0.695 0.574 1e-175
255576868 711 cellulose synthase, putative [Ricinus co 0.917 0.689 0.567 1e-173
296083587 762 unnamed protein product [Vitis vinifera] 0.992 0.695 0.579 1e-172
>gi|359477703|ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/537 (60%), Positives = 400/537 (74%), Gaps = 15/537 (2%)

Query: 1   MFEEQVMKAVEDGEYGN---SRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKS 57
           +F E+VM+A E+G  G+   S +H +IIE+I            A+  EMP+LVYVSREK 
Sbjct: 208 LFRERVMRATENGGIGDKSISGDHPSIIEVIG-----------AEEAEMPILVYVSREKR 256

Query: 58  PEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLA 117
           P H HHFK GALNVLLRVS +ISNSPYIL LDCDMYCNDP S RQAMC HLDP  S SLA
Sbjct: 257 PSHPHHFKAGALNVLLRVSSMISNSPYILVLDCDMYCNDPASVRQAMCCHLDPILSPSLA 316

Query: 118 FVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKG 177
           FVQFPQ+FHN + +DIYD  +RS +   W GMDGL GP L+GTG Y++R +LYG      
Sbjct: 317 FVQFPQRFHNISSNDIYDSQMRSAFSTLWEGMDGLDGPVLSGTGFYMKRVALYGTSIQGD 376

Query: 178 IDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV 237
             L EL+ TFG S+ FIKSL   Y     NG +  +V+ +E  +LASC +E+QTKWGEEV
Sbjct: 377 TSLTELRQTFGYSDEFIKSLSPKYLPNISNGGDSVSVILKEARLLASCQFENQTKWGEEV 436

Query: 238 GFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVS 297
           G  Y SVSED  TG+ LHCKGWTS +  PSRPQF+G+S TNLND+L+QGTRW+SGL+DV 
Sbjct: 437 GVLYHSVSEDVVTGYTLHCKGWTSVFCVPSRPQFVGSSVTNLNDLLVQGTRWSSGLVDVG 496

Query: 298 ISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSP 357
           IS+FCP +YGP + S L ++CY E+S FP  Y LP+WCF T+PQLCL +G+PLYPEVS+ 
Sbjct: 497 ISKFCPFIYGPLKTSFLENICYSELSFFP-FYFLPVWCFGTIPQLCLFHGVPLYPEVSNS 555

Query: 358 FFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLR 417
           FF VF FIFLSA  KHL EVI  GGS+ TW NEQRIWMIKSVTSH YGS+DAIMK + +R
Sbjct: 556 FFGVFPFIFLSACSKHLLEVILAGGSIQTWSNEQRIWMIKSVTSHLYGSLDAIMKRISMR 615

Query: 418 KASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNW 477
           KASFLPTNKV+D++ VK Y+MG+FDF+ S+  L  MV+L++LN+ A + G+ R I  GNW
Sbjct: 616 KASFLPTNKVVDSDHVKLYQMGKFDFRISTTVLASMVTLVVLNMVAFMAGLARAIVFGNW 675

Query: 478 DKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI 534
           +K+  QVLLSLYILI+++ ++EGMI+RKDKGRI  S  LLS VF + FL  GS++L+
Sbjct: 676 EKMLIQVLLSLYILIMSYPVIEGMILRKDKGRIPYSVTLLSIVFAMVFLTLGSVVLL 732

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224111028|ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297737188|emb|CBI26389.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356548660|ref|XP_003542718.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|429326514|gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa] Back     alignment and taxonomy information
>gi|224111026|ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|222864761|gb|EEF01892.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255576870|ref|XP_002529321.1| cellulose synthase, putative [Ricinus communis] gi|223531245|gb|EEF33090.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356535446|ref|XP_003536256.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|255576868|ref|XP_002529320.1| cellulose synthase, putative [Ricinus communis] gi|223531244|gb|EEF33089.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296083587|emb|CBI23576.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query534
TAIR|locus:2124167985 IRX1 "IRREGULAR XYLEM 1" [Arab 0.599 0.324 0.339 1.8e-80
TAIR|locus:21363081084 CESA2 "cellulose synthase A2" 0.589 0.290 0.325 6.4e-78
TAIR|locus:20525761088 CESA9 "cellulose synthase A9" 0.589 0.289 0.328 1.7e-77
TAIR|locus:21760901084 CESA6 "cellulose synthase 6" [ 0.593 0.292 0.318 5e-77
TAIR|locus:21789351026 IRX3 "IRREGULAR XYLEM 3" [Arab 0.612 0.318 0.307 1.4e-76
TAIR|locus:21781931069 CESA5 "cellulose synthase 5" [ 0.604 0.302 0.313 3.2e-76
TAIR|locus:21724571049 CESA4 "cellulose synthase A4" 0.586 0.298 0.325 2.2e-75
TAIR|locus:21567891065 CEV1 "CONSTITUTIVE EXPRESSION 0.591 0.296 0.321 1.1e-73
TAIR|locus:21277761081 CESA1 "cellulose synthase 1" [ 0.584 0.288 0.312 4.9e-73
TAIR|locus:20400801065 CESA10 "cellulose synthase 10" 0.593 0.297 0.306 4.3e-72
TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 503 (182.1 bits), Expect = 1.8e-80, Sum P(2) = 1.8e-80
 Identities = 114/336 (33%), Positives = 187/336 (55%)

Query:   178 IDLAELKDTFGESNLFIKSLHQSYEHKNV-NGENLSNVLQQETEVLASCSYEHQTKWGEE 236
             I     + TFG S +FI+S     E+  V +  N S ++++   V+ SC YE +T+WG+E
Sbjct:   616 ISQTSFEKTFGLSTVFIESTLM--ENGGVPDSVNPSTLIKEAIHVI-SCGYEEKTEWGKE 672

Query:   237 VGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDV 296
             +G+ Y S++ED  TGF +HC+GW S Y  P RP F G++  NL+D L Q  RWA G +++
Sbjct:   673 IGWIYGSITEDILTGFKMHCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEI 732

Query:   297 SISRFCPLLYGPS--RMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEV 354
              +SR CPL YG S  R+ LL  + Y    ++P    LPL  + TLP +CLL G  + P +
Sbjct:   733 FLSRHCPLWYGCSGGRLKLLQRLAYINTIVYPFT-SLPLVAYCTLPAICLLTGKFIIPTL 791

Query:   355 SSPFFMVFSFIFLSAICKHLQEVISTGGSVYT-WRNEQRIWMIKSVTSHFYGSMDAIMKL 413
             S+   M+F  +F+S I   + E+  +G S+   WRNEQ  W+I  V++H +      +K+
Sbjct:   792 SNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQ-FWVIGGVSAHLFAVFQGFLKM 850

Query:   414 LGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIA 473
             L     +F  T+K  D+      E G+      +  L+P  SL+I+N+  +V G    + 
Sbjct:   851 LAGLDTNFTVTSKTADD-----LEFGELYIVKWTTLLIPPTSLLIINLVGVVAGFSDALN 905

Query:   474 VGN--WDKLFAQVLLSLYILIINFAIVEGMIVRKDK 507
              G   W  LF +V  + ++++  +  ++G++ R+++
Sbjct:   906 KGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNR 941
GO:0005886 "plasma membrane" evidence=ISM;TAS
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS;IMP
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA;IMP
GO:0009834 "secondary cell wall biogenesis" evidence=IMP
GO:0005618 "cell wall" evidence=IDA
GO:0006970 "response to osmotic stress" evidence=IMP
GO:0009414 "response to water deprivation" evidence=IMP
GO:0009863 "salicylic acid mediated signaling pathway" evidence=IGI
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=IGI
GO:0009873 "ethylene mediated signaling pathway" evidence=IGI
GO:0010116 "positive regulation of abscisic acid biosynthetic process" evidence=IGI
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0050832 "defense response to fungus" evidence=IMP
GO:0052386 "cell wall thickening" evidence=IMP
GO:0009832 "plant-type cell wall biogenesis" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
4th Layer2.4.1.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00020164001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (741 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query534
PLN02893734 PLN02893, PLN02893, Cellulose synthase-like protei 1e-156
PLN021891040 PLN02189, PLN02189, cellulose synthase 3e-95
PLN02190756 PLN02190, PLN02190, cellulose synthase-like protei 3e-79
PLN022481135 PLN02248, PLN02248, cellulose synthase-like protei 3e-63
PLN029151044 PLN02915, PLN02915, cellulose synthase A [UDP-form 4e-55
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 6e-55
PLN02195977 PLN02195, PLN02195, cellulose synthase A 1e-53
PLN024361094 PLN02436, PLN02436, cellulose synthase A 4e-51
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 2e-50
PLN024001085 PLN02400, PLN02400, cellulose synthase 1e-49
PLN024361094 PLN02436, PLN02436, cellulose synthase A 3e-40
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 2e-38
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 1e-37
PLN02195977 PLN02195, PLN02195, cellulose synthase A 1e-37
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 5e-36
PLN024001085 PLN02400, PLN02400, cellulose synthase 3e-34
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 8e-11
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 3e-10
TIGR03030 713 TIGR03030, CelA, cellulose synthase catalytic subu 2e-07
PRK11498 852 PRK11498, bcsA, cellulose synthase catalytic subun 9e-05
pfam13632194 pfam13632, Glyco_trans_2_3, Glycosyl transferase f 0.002
COG1215439 COG1215, COG1215, Glycosyltransferases, probably i 0.003
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  462 bits (1191), Expect = e-156
 Identities = 200/523 (38%), Positives = 313/523 (59%), Gaps = 35/523 (6%)

Query: 18  SRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSG 77
            ++H T+I+++ + SG+++ I       MP L+YVSREKS    HHFK GALN LLRVS 
Sbjct: 239 RQDHPTVIQVLLE-SGKDKDITGHT---MPNLIYVSREKSKNSPHHFKAGALNTLLRVSA 294

Query: 78  VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGS 137
            ++N+P IL LDCDMY NDP +  +A+C+ LDP     L +VQFPQ FH  N++DIY G 
Sbjct: 295 TMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGE 354

Query: 138 LRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSL 197
           L+  +++   GMDGL GP   GTG + RR   YG                G S+L     
Sbjct: 355 LKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYG----------------GPSSLI---- 394

Query: 198 HQSYEHKNVNGENLSNVLQQETEVLAS------CSYEHQTKWGEEVGFSYQSVSEDFFTG 251
               E   +N ++L +   +  EVLA       C+YE+QT WG ++GF Y S+ ED++TG
Sbjct: 395 --LPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTG 452

Query: 252 FILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRM 311
           + L C+GW S + +P RP FLG S  NL+DVL Q  RW+ GL++V+ S++ P+ +G   +
Sbjct: 453 YRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSI 512

Query: 312 SLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAIC 371
            LL+ + Y   + +P ++ +P+  +A LPQL LLNG+ ++P+ S P+F ++ F+FL A  
Sbjct: 513 GLLMGLGYAHYAFWP-IWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYG 571

Query: 372 KHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNE 431
           + L + + +GG++  W N+QR+WMI+ ++S  +G ++ ++K LG+    F  T+KV+D E
Sbjct: 572 QDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEE 631

Query: 432 QVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYIL 491
           Q KRYE G F+F  SS   +P+ +  I+N+ + + G+ ++    N + LF Q+ L+ + +
Sbjct: 632 QSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAV 691

Query: 492 IINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF-GSIIL 533
           +  + I E M++R D G++ P  I L S+     L+   S   
Sbjct: 692 VNCWPIYEAMVLRTDDGKL-PVKITLISIVLAWALYLASSFAF 733

Length = 734
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>gnl|CDD|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2 Back     alignment and domain information
>gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 534
PF03552720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
PLN024361094 cellulose synthase A 100.0
PLN024001085 cellulose synthase 100.0
PLN026381079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN021891040 cellulose synthase 100.0
PLN02195977 cellulose synthase A 100.0
PLN02190756 cellulose synthase-like protein 100.0
PLN029151044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN02893734 Cellulose synthase-like protein 100.0
PLN022481135 cellulose synthase-like protein 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK05454691 glucosyltransferase MdoH; Provisional 99.98
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 99.97
PRK14583444 hmsR N-glycosyltransferase; Provisional 99.96
COG1215439 Glycosyltransferases, probably involved in cell wa 99.96
PRK11204420 N-glycosyltransferase; Provisional 99.96
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 99.94
PRK14716504 bacteriophage N4 adsorption protein B; Provisional 99.93
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 99.91
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 99.9
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 99.9
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 99.89
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 99.87
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 99.86
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 99.84
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 99.82
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 99.8
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 99.79
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 99.79
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 99.79
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 99.78
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 99.74
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 99.71
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 99.63
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 99.62
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 99.6
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 99.53
cd06438183 EpsO_like EpsO protein participates in the methano 99.32
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 99.31
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 99.25
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 99.11
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 99.11
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 99.11
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 99.06
cd06442224 DPM1_like DPM1_like represents putative enzymes si 99.06
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 99.01
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 99.0
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 98.99
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 98.94
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 98.88
PF03142527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 98.87
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 98.84
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 98.84
cd06423180 CESA_like CESA_like is the cellulose synthase supe 98.82
cd04188211 DPG_synthase DPG_synthase is involved in protein N 98.81
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 98.67
KOG2571862 consensus Chitin synthase/hyaluronan synthase (gly 98.67
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 98.65
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 98.65
PRK10073328 putative glycosyl transferase; Provisional 98.61
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 98.48
PRK10063248 putative glycosyl transferase; Provisional 98.38
COG1216305 Predicted glycosyltransferases [General function p 98.37
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 98.34
PRK10018279 putative glycosyl transferase; Provisional 98.34
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 98.02
KOG2547431 consensus Ceramide glucosyltransferase [Lipid tran 97.85
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 97.84
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 97.69
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 96.04
PF02364 817 Glucan_synthase: 1,3-beta-glucan synthase componen 96.01
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 95.25
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 95.09
PF13712217 Glyco_tranf_2_5: Glycosyltransferase like family; 88.53
cd00899219 b4GalT Beta-4-Galactosyltransferase is involved in 84.91
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 80.24
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information 
Probab=100.00  E-value=5.5e-133  Score=1091.59  Aligned_cols=515  Identities=41%  Similarity=0.781  Sum_probs=477.2

Q ss_pred             hHHHHhHhhhc-------------CC---CCCcccCcceEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCCh
Q 009443            2 FEEQVMKAVED-------------GE---YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFK   65 (534)
Q Consensus         2 ~~~~~~~~~~~-------------~~---~~~~~dh~~~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~K   65 (534)
                      |++|||.++++             |.   +++++|||+||||++++++++    |.++.++|+++|++|||||+++||+|
T Consensus       109 ~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~----~~~g~~lP~lvYvsREKrp~~~Hh~K  184 (720)
T PF03552_consen  109 FKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGK----DVDGNELPMLVYVSREKRPGYPHHFK  184 (720)
T ss_pred             HHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCc----ccccCcCCeEEEEeccCCCCCCchhh
Confidence            78889865443             22   578999999999999998765    67889999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhh
Q 009443           66 GGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQ  145 (534)
Q Consensus        66 AGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~  145 (534)
                      |||||+++|+|+++||+|||+|+|||||+|||+.++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++
T Consensus       185 AGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQfpq~f~~i~~~d~y~~~~~~~~~~~  264 (720)
T PF03552_consen  185 AGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQFPQRFDGIDKNDRYGNQNRVFFDIN  264 (720)
T ss_pred             hcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeCCceeCCCCcCCCCCccceeeeecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhcCCcccccceeeeeccccCC-CccccCc----------------------------------------------
Q 009443          146 WPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKGI----------------------------------------------  178 (534)
Q Consensus       146 ~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~~~----------------------------------------------  178 (534)
                      ++|+||+|||+|+||||+|||+|||| .|++...                                              
T Consensus       265 ~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (720)
T PF03552_consen  265 MRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKKPKKRASKRRESSSPIFALEDIE  344 (720)
T ss_pred             ccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCcccccccccchhccccccccccccccccccc
Confidence            99999999999999999999999999 5543110                                              


Q ss_pred             --------------chHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccccCCCcc
Q 009443          179 --------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV  244 (534)
Q Consensus       179 --------------d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~~~sv  244 (534)
                                    +.++++++||+|++||+|+..+..  ..+....+.++|+||++|++|+||++|+||+||||.|||+
T Consensus       345 ~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~--~~~~~~~~~~~L~EA~~V~sC~YE~~T~WGkevGwiYGSv  422 (720)
T PF03552_consen  345 EGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQG--GVPRSPSPASLLEEAIHVASCGYEDKTEWGKEVGWIYGSV  422 (720)
T ss_pred             cccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhc--CCCCCCChHHHHHHHHHHhcCCccccCCcccccceEEEec
Confidence                          013667899999999999976542  3344666789999999999999999999999999999999


Q ss_pred             cchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhhhcCCcccC-CcccchhHHHHHHhHh
Q 009443          245 SEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMS  323 (534)
Q Consensus       245 tED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~-~~~l~~~qrl~Y~~~~  323 (534)
                      |||+.||++||++||||+||.|++++|.|+||+||.+.|.|++|||+|++||++||+||++++ .++|+++|||+|++.+
T Consensus       423 tEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~rL~~lQrLaY~~~~  502 (720)
T PF03552_consen  423 TEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGRLKFLQRLAYLNYM  502 (720)
T ss_pred             ccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCCCcHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999999986 5799999999999999


Q ss_pred             HhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHH
Q 009443          324 LFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHF  403 (534)
Q Consensus       324 ~~~~~~~~~~l~y~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~~~~~~~~~  403 (534)
                      +|| ++|+|.++|+++|++||++|++++|+++.+|+++|++++++++++.++|++|+|+++++|||+||+|+|.++++++
T Consensus       503 ~yp-l~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~wsG~si~~WWrnQq~W~I~~tSa~L  581 (720)
T PF03552_consen  503 LYP-LTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWSGVSIREWWRNQQFWMIGGTSAHL  581 (720)
T ss_pred             hhH-HHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhccCcHHHhhcccceeeehhhHHHH
Confidence            999 9999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCcccceeeccCCcchhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhc--CCchHHH
Q 009443          404 YGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAV--GNWDKLF  481 (534)
Q Consensus       404 ~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~l~~P~~~l~~l~l~alv~g~~~~~~~--g~~~~~~  481 (534)
                      ++++++++|++|+++++|.||+|+.++++.+.+  ++|+|+ ++++++|.++++++|++|+++|+++.++.  ++|++++
T Consensus       582 fAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~~--ely~f~-wS~LfiP~tTllilNLva~v~Gi~r~i~~g~~~~g~l~  658 (720)
T PF03552_consen  582 FAVLQGILKVLGGSETSFTVTSKVSDDEDDKYA--ELYIFK-WSPLFIPPTTLLILNLVAFVVGISRAINSGYGSWGPLL  658 (720)
T ss_pred             HHHHHHHHHHHcCCccceeeccccccccccccc--cccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhccCCCchhHHH
Confidence            999999999999999999999999875443333  578888 78899999999999999999999998864  3688999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCCCChhHHHHHHHHHHHHHHh
Q 009443          482 AQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF  528 (534)
Q Consensus       482 ~~l~~~~w~~~~l~p~~~al~~r~~~~~~P~~~~~~s~~~~~~~~~~  528 (534)
                      +++++++|++++++||++||++||+  |+|+++++||++||++|+++
T Consensus       659 g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~ll  703 (720)
T PF03552_consen  659 GQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLL  703 (720)
T ss_pred             HHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHH
Confidence            9999999999999999999999976  69999999999999999986

The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
>PLN02436 cellulose synthase A Back     alignment and domain information
>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B Back     alignment and domain information
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query534
4hg6_A 802 Structure Of A Cellulose Synthase - Cellulose Trans 3e-04
>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 Back     alignment and structure 
Iteration: 1

 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 224 SCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVL 283
           S +   +    E  GF+ ++++ED  T   +H +GW S Y+D  R    G         +
Sbjct: 320 SAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYID--RAMIAGLQPETFASFI 377
Query: 284 IQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCY-GEMS--LFPLLYCLPLWCFATLP 340
            Q  RWA+G++ + + +      G   + +   +CY   MS   FPL+  +    F   P
Sbjct: 378 QQRGRWATGMMQMLLLKNPLFRRG---LGIAQRLCYLNSMSFWFFPLVRMM----FLVAP 430
Query: 341 QLCLLNGIPLY 351
            + L  GI ++
Sbjct: 431 LIYLFFGIEIF 441

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query534
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 100.0
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.29
3bcv_A240 Putative glycosyltransferase protein; protein stru 99.23
1xhb_A472 Polypeptide N-acetylgalactosaminyltransferase 1; g 99.2
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 99.18
2d7i_A570 Polypeptide N-acetylgalactosaminyltransferase 10; 99.11
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.06
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 99.01
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 98.79
4fix_A657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 98.64
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 98.56
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 98.38
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 98.02
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 97.8
2bo4_A397 Mannosylglycerate synthase; catalysis, glycosyltra 97.04
2zu9_A394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 88.38
2wvl_A391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 84.09
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=100.00  E-value=7.3e-41  Score=383.22  Aligned_cols=353  Identities=20%  Similarity=0.320  Sum_probs=280.0

Q ss_pred             CcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCCceEEEcCCccc
Q 009443           47 PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKF  125 (534)
Q Consensus        47 p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~pq~f  125 (534)
                      .++.|+.|+++    +++|+||+|.+++.    ++||||+++|||++ ++|+++++++.+|. ||+    +++||+|+.+
T Consensus       212 ~~v~~i~~~~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~-~~pd~L~~lv~~~~~dp~----v~~V~~~~~~  278 (802)
T 4hg6_A          212 LGVVYSTRERN----EHAKAGNMSAALER----LKGELVVVFDADHV-PSRDFLARTVGYFVEDPD----LFLVQTPHFF  278 (802)
T ss_dssp             HTCEEEECSSC----CSHHHHHHHHHHHH----CCCSEEEECCTTEE-ECTTHHHHHHHHHHHSSS----CCEEECCCCB
T ss_pred             cCcEEEEecCC----CCcchHHHHHHHHh----cCCCEEEEECCCCC-cChHHHHHHHHHHhcCCC----eEEEeccEEE
Confidence            47889999876    57999999999999    89999999999997 56999999999994 665    8999999999


Q ss_pred             cCCCccchHH----------HHHHHhhhhhHhhhhhcCCcccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHh
Q 009443          126 HNFNEHDIYD----------GSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIK  195 (534)
Q Consensus       126 ~n~~~~d~~~----------~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~  195 (534)
                      .|.+   +..          ++...++...+.+.+.+++++++|+++++||+++                          
T Consensus       279 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al--------------------------  329 (802)
T 4hg6_A          279 INPD---PIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRAL--------------------------  329 (802)
T ss_dssp             SSCC---HHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHH--------------------------
T ss_pred             eCCc---hHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHH--------------------------
Confidence            8853   322          2345678889999999999999999999999999                          


Q ss_pred             hhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCcccchHHHHHHHHhCCCEEEEeCCCCCceeec
Q 009443          196 SLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGT  274 (534)
Q Consensus       196 s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~  274 (534)
                                                             +++ ||++++++||.+++.+++++||++.|+++  +.+.+.
T Consensus       330 ---------------------------------------~~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~  368 (802)
T 4hg6_A          330 ---------------------------------------DEAGGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGL  368 (802)
T ss_dssp             ---------------------------------------HHHTTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEEC
T ss_pred             ---------------------------------------HHcCCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEec
Confidence                                                   456 69999999999999999999999999997  688999


Q ss_pred             cCCCHHHHHHhhhhcccccchhhhhhcCCcccCCcccchhHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCccccc
Q 009443          275 STTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEV  354 (534)
Q Consensus       275 aP~~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~Y~~~~~~~~~~~~~~l~y~~~P~~~ll~g~~~~~~~  354 (534)
                      +|+++.++++||.||++|.+|+++ +++|++  .+++++.||++|+....++ +.+++.++++++|+++++++..+++..
T Consensus       369 ~p~t~~~~~~Qr~RW~~G~~q~l~-~~~pl~--~~~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~  444 (802)
T 4hg6_A          369 QPETFASFIQQRGRWATGMMQMLL-LKNPLF--RRGLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVAT  444 (802)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH-HSCTTS--CSSCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCC
T ss_pred             CCCCHHHHHHHHHHHHccHHHHHH-HhCccc--cCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence            999999999999999999999998 567877  4789999999999988888 888899999999999999999988765


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHcCcccceeeccCCcchhhhh
Q 009443          355 SSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVK  434 (534)
Q Consensus       355 ~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~~~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~  434 (534)
                      ...++.++++.++..   .++.....+.....||+..    +.. ...++.+...+..++++++.+|+||+|+...+.. 
T Consensus       445 ~~~~~~~~lp~~l~~---~~~~~~~~~~~r~~~~~~l----~~~-~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~-  515 (802)
T 4hg6_A          445 FEEVLAYMPGYLAVS---FLVQNALFARQRWPLVSEV----YEV-AQAPYLARAIVTTLLRPRSARFAVTAKDETLSEN-  515 (802)
T ss_dssp             HHHHHHHHHHHHHHH---HHHHHHHHTTTSCTTHHHH----HHH-HHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSSC-
T ss_pred             HHHHHHHHHHHHHHH---HHHHHHHhcCcHHHHHHHH----HHH-HHHHHHHHHHHHHHhCCCCCcceECCCCcccccc-
Confidence            444444444433221   1111122333334566553    222 2444556666677788899999999999865431 


Q ss_pred             hhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 009443          435 RYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDK  507 (534)
Q Consensus       435 ~y~~~~f~f~~~~~l~~P~~~l~~l~l~alv~g~~~~~~~g~~~~~~~~l~~~~w~~~~l~p~~~al~~r~~~  507 (534)
                           .     .+.+..|++++++++++++++|++++....  ......+++++|.++|++.+.-++....++
T Consensus       516 -----~-----~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~  576 (802)
T 4hg6_A          516 -----Y-----ISPIYRPLLFTFLLCLSGVLATLVRWVAFP--GDRSVLLVVGGWAVLNVLLVGFALRAVAEK  576 (802)
T ss_dssp             -----C-----BCTTCHHHHHHHHHHHHHHHHHHHHHHHCG--GGHHHHHHHHHHHHHHHHHHHHHHTTTBCC
T ss_pred             -----c-----hhhHHHHHHHHHHHHHHHHHHHHHHHhccC--CccchhhhhhHHHHHHHHHHHHHHHHHhcC
Confidence                 1     125678999999999999999999987432  234556778888888888887777664443
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query534
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 99.17
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 98.48
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 98.39
d2bo4a1381 Mannosylglycerate synthase, MGS {Rhodothermus mari 90.8
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.17  E-value=2.6e-11  Score=120.81  Aligned_cols=84  Identities=13%  Similarity=-0.085  Sum_probs=60.2

Q ss_pred             cccCcc---eEEEEECCCCChhh--hHHh-hhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCC
Q 009443           18 SRNHST---IIEIIQDTSGENET--IRQA-DLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCD   91 (534)
Q Consensus        18 ~~dh~~---~i~vi~~~~~~~~~--~~~~-~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD   91 (534)
                      .|.+|.   .|-|+.|+|.|+..  ..+. .....+.++++..+++     .++++|.|.|++.    ++||||+++|+|
T Consensus        47 ~qt~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~n-----~G~~~a~N~Gi~~----a~gd~i~flD~D  117 (328)
T d1xhba2          47 NRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQR-----SGLIRARLKGAAV----SRGQVITFLDAH  117 (328)
T ss_dssp             HSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEEEESS
T ss_pred             hcCCCCCCeEEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEeccc-----ccchHHHHHHHHh----hhcceeeecCcc
Confidence            455554   34345455655421  2222 2334557888877665     5899999999999    999999999999


Q ss_pred             CCCCchHHHHHHHHHhcCCC
Q 009443           92 MYCNDPTSARQAMCFHLDPK  111 (534)
Q Consensus        92 ~~~~~p~~l~~~~~~f~dp~  111 (534)
                      .+ ++|++|++++..|.+.+
T Consensus       118 ~~-~~p~~l~~l~~~~~~~~  136 (328)
T d1xhba2         118 CE-CTAGWLEPLLARIKHDR  136 (328)
T ss_dssp             EE-ECTTCHHHHHHHHHHCT
T ss_pred             cc-cChhHHHHHHHHHhcCC
Confidence            97 56999999999887544
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure