Citrus Sinensis ID: 009740

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------
Protein Sequence
MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQSKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMAGTPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDDSVSH
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccc
Coil and Loop (DISEMBL)
MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALgehasfsrgkgTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSeiagngqsinsvdaqvdECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNevhpslsdsknvqsksisndTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLletpvneqrkvdHVTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIdsgnvdlsdlLSSMDDQIAKAKEEALSRKDILDKVEKwkhgaeeeqwLDDYEKdenrysagrgahkNLKRAEKARILISKLPSVVENLIAKVKAWEAekripflydkvplLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEaiygsrpsikkplcqststntmagtpvgrrfttpsgrhvisggkerresirvtkpiplnyvalpkddsvsh
Flexible Loop (DISEMBL)
MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEhasfsrgkgtlkQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLrelqneknlrlQKVNNNLSTIHELSLVLSINFLETVNEVhpslsdsknvqsksisNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSlvsssvdevSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKeealsrkdildkvekwkhgaeeeqwlddyeKDENRysagrgahknlkraEKARILISKLPSVVENLIAKVKaweaekripflydkvpllSILEEYTAQCQKREEEKRRCREQKRLQEQFAAeqeaiygsrpsikkplcqststntmagtpvgrrfttpsgrhvisggkerresirvtkpiplnyvalpkddsvsh
Low Complexity Region (SEG)
MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQSKSISNDTIARLTGVIHllkqekqqrlqklqslGNALIKLWDLLETPVNEQRKVDHVTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNVdlsdllssmddQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEEYTAqcqkreeekrrcreqkrlqeqFAAEQEAIYGSRPSIKKPLCQSTSTNTMAGTPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDDSVSH
Disordered region (IsUnstruct)
******QDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSR***TLKQQISAIRSIL**********IKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEV******************TIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPV*********************MLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNVDLSDL**************************************************************KARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEEYTAQC**********************************************************************************LNYV**********
Disordered Region (DISOPRED)
MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEH**********KQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIA***********Q*DECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHP**********KSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSS*********CLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDDYEK************************ISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSIL*******************************************************************************************************
Disordered Region (DISEMBL)
MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVH************SISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEEYTAQ*************QKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMAGTPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDDSVSH
Disordered Region (DISPRO)
MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGN*****SVDAQVDECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSD*****SKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIY********************************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQSKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSSSVDEVSMLGCLALDVxxxxxxxxxxxxxxxxxxxxxLVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGxxxxxxxxxxxxxxxxxxxxxALSRKDILDKVEKWKHGAEEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSIxxxxxxxxxxxxxxxxxxxxxKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMAGTPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDDSVSH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	527	2.2.26 [Sep-21-2011]
Q9ZVJ3	550	65-kDa microtubule-associ	yes	no	0.982	0.941	0.588	1e-171
Q8LEG3	578	65-kDa microtubule-associ	no	no	0.982	0.896	0.493	1e-139
Q9FLP0	587	65-kDa microtubule-associ	no	no	0.988	0.887	0.509	1e-138
Q8L836	603	65-kDa microtubule-associ	no	no	0.996	0.870	0.440	1e-119
Q9SIS3	608	65-kDa microtubule-associ	no	no	0.992	0.860	0.421	1e-113
Q9C7G0	562	65-kDa microtubule-associ	no	no	0.954	0.895	0.405	1e-104
Q9FHM4	707	65-kDa microtubule-associ	no	no	0.910	0.678	0.433	1e-101
Q9LZY0	677	65-kDa microtubule-associ	no	no	0.878	0.683	0.409	1e-90
Q4PSA3	549	65-kDa microtubule-associ	no	no	0.908	0.872	0.383	1e-83
O43663	620	Protein regulator of cyto	no	no	0.819	0.696	0.238	2e-12

>sp|Q9ZVJ3|MA655_ARATH 65-kDa microtubule-associated protein 5 OS=Arabidopsis thaliana GN=MAP65-5 PE=1 SV=2

 Score =  602 bits (1551), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 308/523 (58%), Positives = 401/523 (76%), Gaps = 5/523 (0%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQ 60
           MLLELEQ+CLDIY +KVE+TRK++A+L +SLA AEAEIA L+SALGE  SF++ +G+LK+
Sbjct: 33  MLLELEQECLDIYNKKVEKTRKFRAELQRSLAQAEAEIASLMSALGEKVSFAKKEGSLKE 92

Query: 61  QISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKK 120
           QIS+++ +LEDL  KK++R KE S    QIA+I+S IAGN  +++S  ++VDE DLT +K
Sbjct: 93  QISSVKPVLEDLLMKKDRRRKELSETLNQIAEITSNIAGNDYTVSS-GSEVDESDLTQRK 151

Query: 121 LGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQSK 180
           L EL+  L++L+NEK +RLQKVN+ +S +HELS +LS +F + +N VH SL++     SK
Sbjct: 152 LDELRADLQDLRNEKAVRLQKVNSYISAVHELSEILSFDFSKALNSVHSSLTEFSKTHSK 211

Query: 181 SISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVS 240
           SISNDT+AR T ++  LK EK +RL KLQ LG ++ +LW+L+ETP++E+R+ DH +SL+S
Sbjct: 212 SISNDTLARFTELVKSLKAEKHERLLKLQGLGRSMQELWNLMETPMDERRRFDHCSSLLS 271

Query: 241 SSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSD 300
           S  D+    GCL+LD+I + E EV  LN  K+SKMKELVFKRQ ELEEI +G HMD++SD
Sbjct: 272 SLPDDALKKGCLSLDIIREAEDEVRRLNSLKSSKMKELVFKRQCELEEICRGNHMDINSD 331

Query: 301 AARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDD 360
           AAR+ L+ LI+SG+ DLSD+L+S+D QI KA+EEALSRK+ILDKV+KW+H  EEE WLDD
Sbjct: 332 AARKSLVELIESGDGDLSDILASIDGQIEKAREEALSRKEILDKVDKWRHAKEEETWLDD 391

Query: 361 YEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPL 420
           YEKDENR+SA RGAHKNLKRAEKAR LISK+P++V+ L  KVKAWE E+ +PFL DK PL
Sbjct: 392 YEKDENRFSAVRGAHKNLKRAEKARSLISKIPAMVDVLTTKVKAWEKERGVPFLCDKQPL 451

Query: 421 LSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMAG 480
           L  LE+      +REEEKR+ REQKRLQ Q A E+EA YGS+ + KKPL QS +T+ +  
Sbjct: 452 LQTLEDDIVIRAQREEEKRQFREQKRLQGQLATEKEAKYGSKSAKKKPLGQSLNTDNVTK 511

Query: 481 TPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDD 523
           TP+GRR     GR V SGGK+     R    IPLNYVAL KDD
Sbjct: 512 TPIGRRIGNTPGRSVTSGGKD----YRGNAVIPLNYVALQKDD 550

Microtubule-associated protein that bundle and stabilize adjacent microtubules (MT) of the cell cortex. Confers MT resistance to the drug oryzalin. Promotes the formation of a planar network of antiparallel microtubules.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8LEG3|MA652_ARATH 65-kDa microtubule-associated protein 2 OS=Arabidopsis thaliana GN=MAP65-2 PE=1 SV=1

 Score =  496 bits (1276), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/535 (49%), Positives = 375/535 (70%), Gaps = 17/535 (3%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFS---RGKGT 57
           +LL++E++CL++Y++KVE   K +A+L Q+L+DA  E++ L +ALGE +      +  GT
Sbjct: 40  LLLQIEEECLNVYKKKVELAAKSRAELLQTLSDATVELSNLTTALGEKSYIDIPDKTSGT 99

Query: 58  LKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLT 117
           +K+Q+SAI   LE L  +KE+R++ FS +Q QI +I  EIAG    +N+    VDE DL+
Sbjct: 100 IKEQLSAIAPALEQLWQQKEERVRAFSDVQSQIQKICEEIAGG---LNNGPHVVDETDLS 156

Query: 118 VKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNV 177
           +K+L + +  L+ELQ EK+ RLQKV   +ST+H+L  VL ++FL TV EVHPSL ++  V
Sbjct: 157 LKRLDDFQRKLQELQKEKSDRLQKVLEFVSTVHDLCAVLRLDFLSTVTEVHPSLDEANGV 216

Query: 178 QSKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTS 237
           Q+KSISN+T+ARL   +  LK++K QRL+KLQ L   L  LW+L++T   E+   DHVTS
Sbjct: 217 QTKSISNETLARLAKTVLTLKEDKMQRLKKLQELATQLTDLWNLMDTSDEERELFDHVTS 276

Query: 238 LVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDV 297
            +S+SV EV+  G LALD+IEQ EVEV+ L++ K+S+MKE+ FK+Q ELEEIY   H+++
Sbjct: 277 NISASVHEVTASGALALDLIEQAEVEVDRLDQLKSSRMKEIAFKKQSELEEIYARAHIEI 336

Query: 298 DSDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQW 357
             +  R+ ++SLID+GN + ++LL+ MD QIAKAKEEA SRK+ILD+VEKW    EEE W
Sbjct: 337 KPEVVRERIMSLIDAGNTEPTELLADMDSQIAKAKEEAFSRKEILDRVEKWMSACEEESW 396

Query: 358 LDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDK 417
           L+DY +D+NRYSA RGAH NLKRAEKARIL+SK+ ++V+ LIAK +AWE E  + F YD 
Sbjct: 397 LEDYNRDQNRYSASRGAHLNLKRAEKARILVSKITAMVDTLIAKTRAWEEENSMSFEYDG 456

Query: 418 VPLLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRP------SIKKPLCQ 471
           VPLL++L+EYT   Q+RE+EKRR +EQK+ QEQ   +QE+ +GS+P      S KKP+  
Sbjct: 457 VPLLAMLDEYTMLRQEREDEKRRLKEQKKQQEQPHTDQESAFGSKPSPARPVSAKKPVGT 516

Query: 472 STSTNTMAGTPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDDSVS 526
             +   +  TP+ RR +  S ++   G K +R+S+      P N VA  KDD+ S
Sbjct: 517 RVNGGGLNETPM-RRLSMNSNQN---GSKSKRDSLNKIAS-PSNIVANTKDDAAS 566

Microtubule-associated protein that stabilize microtubules (MT). Involved in the regulation of MT organization and dynamics. Confers MT resistance to the drug propyzamide and cold conditions.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLP0|MA651_ARATH 65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana GN=MAP65-1 PE=1 SV=1

 Score =  491 bits (1264), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 274/538 (50%), Positives = 384/538 (71%), Gaps = 17/538 (3%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFS---RGKGT 57
           +LL++EQ+CLD+Y+RKVE+  K +A+L Q+L+DA AE++ L  +LG+ +      +  GT
Sbjct: 40  LLLQIEQECLDVYKRKVEQAAKSRAELLQTLSDANAELSSLTMSLGDKSLVGIPDKSSGT 99

Query: 58  LKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLT 117
           +K+Q++AI   LE L  +KE+R++EFS +Q QI +I  +IAG G S N V   VDE DL+
Sbjct: 100 IKEQLAAIAPALEQLWQQKEERVREFSDVQSQIQKICGDIAG-GLS-NEVPI-VDESDLS 156

Query: 118 VKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNV 177
           +KKL + ++ L+ELQ EK+ RL+KV   +ST+H+L  VL ++FL TV EVHPSL +  +V
Sbjct: 157 LKKLDDFQSQLQELQKEKSDRLRKVLEFVSTVHDLCAVLGLDFLSTVTEVHPSLDEDTSV 216

Query: 178 QSKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTS 237
           QSKSISN+T++RL   +  LK +K+QRLQKLQ L   LI LW+L++TP  E+   DHVT 
Sbjct: 217 QSKSISNETLSRLAKTVLTLKDDKKQRLQKLQELATQLIDLWNLMDTPDEERELFDHVTC 276

Query: 238 LVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDV 297
            +SSSVDEV++ G LA D+IEQ EVEV+ L++ KAS+MKE+ FK+Q ELEEIY   H++V
Sbjct: 277 NISSSVDEVTVPGALARDLIEQAEVEVDRLDQLKASRMKEIAFKKQSELEEIYARAHVEV 336

Query: 298 DSDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQW 357
           + ++AR+ ++SLIDSGNV+ ++LL+ MD QI+KAKEEA SRKDILD+VEKW    EEE W
Sbjct: 337 NPESARERIMSLIDSGNVEPTELLADMDSQISKAKEEAFSRKDILDRVEKWMSACEEESW 396

Query: 358 LDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDK 417
           L+DY +D+NRYSA RGAH NLKRAEKARIL+SK+P++V+ L+AK +AWE E  + F YD 
Sbjct: 397 LEDYNRDQNRYSASRGAHLNLKRAEKARILVSKIPAMVDTLVAKTRAWEEEHSMSFAYDG 456

Query: 418 VPLLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQSTS--- 474
           VPLL++L+EY    Q+REEEKRR REQK++QEQ   EQE+ + +RPS  +P+    +   
Sbjct: 457 VPLLAMLDEYGMLRQEREEEKRRLREQKKVQEQPHVEQESAFSTRPSPARPVSAKKTVGP 516

Query: 475 --TNTMAGTPVGRRFT---TPSGRHVISGGKERRESIRVTKP-IPLNYVALPKDDSVS 526
              N  A     RR +     +G    +    RRE++   +P  P NYVA+ K+++ S
Sbjct: 517 RANNGGANGTHNRRLSLNANQNGSRSTAKEAGRRETL--NRPAAPTNYVAISKEEAAS 572

Microtubule-associated protein that bundle and stabilize adjacent microtubules (MT) of the cell cortex. Enhances MT nucleation. Can also bind to tubulin dimers and promotes their polymerization. Confers MT resistance to the drug propyzamide and cold conditions. Plays a role in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. Represses metaphase spindle organization and the transition to anaphase in dephosphorylated active form. Promotes the formation of a planar network of antiparallel microtubules. May be involved in stomatal movement modulation by regulating the dynamic and arrangement of cortical MT.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L836|MA657_ARATH 65-kDa microtubule-associated protein 7 OS=Arabidopsis thaliana GN=MAP65-7 PE=2 SV=1

 Score =  429 bits (1104), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/547 (44%), Positives = 355/547 (64%), Gaps = 22/547 (4%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFS-----RGK 55
           ML+ELE++CL+IYRRKV+     KA LHQSL   EAEIA L++ALG   S S      G 
Sbjct: 42  MLMELEKECLEIYRRKVDEAANSKAQLHQSLVSIEAEIASLLAALGVFNSHSPMKAKEGS 101

Query: 56  GTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSV---DAQVD 112
            +LK++++A+R +LEDLR +K++R+K+F  I+ QI ++S EI+G    +N        +D
Sbjct: 102 KSLKEKLAAVRPMLEDLRLQKDERMKQFVDIKAQIEKMSGEISGYSDQLNKTMVGSLALD 161

Query: 113 ECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLS 172
           E DLT++KL E +THLR LQ EK+ RL KV + ++ +H L  VL ++F +TV+EVHPSL 
Sbjct: 162 EQDLTLRKLNEYQTHLRSLQKEKSDRLNKVLDYVNEVHTLCGVLGVDFGQTVSEVHPSLH 221

Query: 173 DSKNVQSKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKV 232
            + + QS +IS+DT+  L  +IH LK E+  R QKL+ +  +L +LW+L++T   E+ K 
Sbjct: 222 RTDHEQSTNISDDTLDGLHHMIHKLKTERSVRFQKLKDVAGSLFELWNLMDTSQEERTKF 281

Query: 233 DHVTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKG 292
             V+ +V SS  +++    L+ + IEQ+  EV+  N+ KAS+MKELV KR+ ELE + + 
Sbjct: 282 ASVSYVVRSSESDITEPNILSSETIEQVSAEVDCFNKLKASRMKELVMKRRTELENLCRL 341

Query: 293 VHMDVDSDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGA 352
            H++ D+  + +   +LIDSG VD S+LL++++  I K KEEA SRK+I+D++++W    
Sbjct: 342 AHIEADTSTSLEKSTALIDSGLVDPSELLTNIELHINKIKEEAHSRKEIIDRIDRWLSAC 401

Query: 353 EEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIP 412
           EEE WL++Y +DE RYSAGRG H NLK AE+ARI ++K+PS+V+NLI K   WE E R  
Sbjct: 402 EEENWLEEYNQDETRYSAGRGGHVNLKHAERARITVNKIPSMVDNLIKKTLLWEDETRKS 461

Query: 413 FLYDKVPLLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKK--PLC 470
           FLYD V L+SILE+Y    +++EEEKRR R+QK++Q+     +E+IYGS+PS ++   + 
Sbjct: 462 FLYDGVRLVSILEDYKLTRKQQEEEKRRYRDQKKMQDLLIKRRESIYGSKPSPRRSNSVR 521

Query: 471 QSTSTNTMAGTPVGRR-----------FTTPSGRHVISGGKERRESIRVTKPIPLNYVAL 519
           ++   N  A  P   R            TTP            +E +R     PLN+VA+
Sbjct: 522 KTNGYNGDASVPPTPRRNSAGATNNDIMTTPRSYSSHRQNGYFKE-VRRLSTAPLNFVAI 580

Query: 520 PKDDSVS 526
           PK+DSVS
Sbjct: 581 PKEDSVS 587

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SIS3|MA656_ARATH 65-kDa microtubule-associated protein 6 OS=Arabidopsis thaliana GN=MAP65-6 PE=1 SV=1

 Score =  410 bits (1054), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/553 (42%), Positives = 353/553 (63%), Gaps = 30/553 (5%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALG-----EHASFSRGK 55
           ML+ELE++CL IY+RKV+     KA LHQS+A  EAE+A L++ALG           +G 
Sbjct: 42  MLMELERECLQIYQRKVDEAANSKAKLHQSVASIEAEVASLMAALGVLNINSPIKLDKGS 101

Query: 56  GTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSIN---SVDAQVD 112
            +LK++++A+  ++E+LR +KE+R+K+FS I+ QI +IS EI+G    +N   ++   ++
Sbjct: 102 KSLKEKLAAVTPLVEELRIQKEERMKQFSDIKAQIEKISGEISGYSDHLNKAMNISLTLE 161

Query: 113 ECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLS 172
           E DLT++ L E +THLR LQ EK+ RL KV   ++ +H L  VL ++F +TV+ VHPSL 
Sbjct: 162 EQDLTLRNLNEYQTHLRTLQKEKSDRLNKVLGYVNEVHALCGVLGVDFSQTVSAVHPSLH 221

Query: 173 DSKNVQSKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKV 232
            +   QS +IS+ T+  L  +I  LK E++ R QKL+ +  +L +LW+L++TP  ++ K 
Sbjct: 222 RTDQEQSTNISDSTLEGLEHMIQKLKTERKSRFQKLKDVVASLFELWNLMDTPQEDRTKF 281

Query: 233 DHVTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKG 292
             VT +V SS   ++  G L+ + IEQ+  EV+ L++ KAS+MKELV KR+ ELE++ + 
Sbjct: 282 GKVTYVVRSSEANITEPGILSTETIEQVSTEVDSLSKLKASRMKELVMKRRSELEDLCRL 341

Query: 293 VHMDVDSDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGA 352
            H+  D+  + +   +LIDSG VD S+LL++++ QI K K+EA SRKDI+D++++W    
Sbjct: 342 THIQPDTSTSAEKSTALIDSGLVDPSELLANIEMQINKIKDEAQSRKDIMDRIDRWLSAC 401

Query: 353 EEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIP 412
           EEE WL++Y  DENRYSAGRG H NLKRAE+AR+ I+K+P +V+ LI K   WE + +  
Sbjct: 402 EEENWLEEYNLDENRYSAGRGGHVNLKRAERARVTINKIPGMVDTLIKKTLVWEEDMQKS 461

Query: 413 FLYDKVPLLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYG------SRPSIK 466
           FLYD V L++ILE+Y    +++EEEK+R R+QK+ Q+    ++E+IYG         S +
Sbjct: 462 FLYDGVRLVNILEDYKLTRKQQEEEKKRYRDQKKRQDLLLTQRESIYGSKPSPRRSSSFR 521

Query: 467 KPLCQSTSTNTMAGTPVGRR----FTTP---------SGRHVISGGKERRESIRVTKPIP 513
           KP   + S    +  P  RR     TTP         SG H  +G     + +R     P
Sbjct: 522 KPNGFNISNGNGSVPPTPRRGSVGTTTPDVLLTPRSYSGHHRQNG---YFKEVRRLSTTP 578

Query: 514 LNYVALPKDDSVS 526
           LNYVA+ K+D+VS
Sbjct: 579 LNYVAMQKEDTVS 591

Microtubule-associated protein that mediates the formation of a mesh-like stable and dense network formed by individual microtubules (MT). Confers MT resistance to high concentration of NaCl.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C7G0|MA658_ARATH 65-kDa microtubule-associated protein 8 OS=Arabidopsis thaliana GN=MAP65-8 PE=1 SV=2

 Score =  378 bits (970), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/516 (40%), Positives = 334/516 (64%), Gaps = 13/516 (2%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGK---GT 57
           +LL++EQ+C++ YRRKV+     ++ LHQ LA++EAE+   +  LGE +   R +   GT
Sbjct: 44  VLLDIEQECVEAYRRKVDHANVSRSRLHQELAESEAELTHFLLCLGERSVPGRPEKKGGT 103

Query: 58  LKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSV-DAQVDECDL 116
           L++Q+ +I   L ++R +K++R+K+F  ++ +I +IS+EIAG     +S     +D+ DL
Sbjct: 104 LREQLDSIAPALREMRLRKDERVKQFRSVKGEIQKISAEIAGRSTYEDSTRKITIDDNDL 163

Query: 117 TVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKN 176
           + KKL E +  L  L +EKN RLQKV+  +  I +LS  L       + ++HPSL+D   
Sbjct: 164 SNKKLEEYQNELHRLHDEKNERLQKVDIYICAIRDLSATLGTEASMIITKIHPSLNDLYG 223

Query: 177 VQSKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVT 236
           + SK+IS+D + +L G +  L++EK +RL+KL  LG AL  LW+L++    +++K  HV 
Sbjct: 224 I-SKNISDDILKKLNGTVVSLEEEKHKRLEKLHHLGRALSNLWNLMDASYEDRQKFFHVI 282

Query: 237 SLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMD 296
            L+SS+  +V   G + LD+I+Q E EV+ L++ KAS++KEL  K+Q ELE+     HM+
Sbjct: 283 DLLSSAPSDVCAPGSITLDIIQQAEAEVKRLDQLKASRIKELFIKKQKELEDTCNMSHME 342

Query: 297 VDSDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQ 356
             S     I  +L+DSG VD  DLL++MD++IA+AKEEA SRK I++KV++W   ++EE+
Sbjct: 343 TPSTEMGNI-TNLVDSGEVDHVDLLAAMDEKIARAKEEAASRKGIIEKVDRWMLASDEER 401

Query: 357 WLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYD 416
           WL++Y++DENRYS  R AH+NL+RAE+ARI +SK+  +VE+++ K K+WE E++  FLY+
Sbjct: 402 WLEEYDQDENRYSVSRNAHRNLRRAERARITVSKISGLVESILVKAKSWEVERQKVFLYN 461

Query: 417 KVPLLSILEEYTAQCQKREEEKRRCREQKRLQ-EQFAAEQEAIYGSRPSIKKPLCQSTST 475
           +VPL+++L+EY    Q++E EK+R RE K++   Q  AE +  Y +RP+       + S 
Sbjct: 462 EVPLVAMLQEYNKLRQEKEMEKQRLREMKKMSIPQPVAEGDNFYMARPASSNRRISNRSM 521

Query: 476 NT--MAGTPVGRR----FTTPSGRHVISGGKERRES 505
           N    +G+P+ R+    F   +  +   G   RRES
Sbjct: 522 NGGFGSGSPINRKYSGGFNNTNNNYTALGTSIRRES 557

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1

 Score =  369 bits (946), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 211/487 (43%), Positives = 318/487 (65%), Gaps = 7/487 (1%)

Query: 12  IYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSR----GKGTLKQQISAIRS 67
           +YRRKV++  + +A L Q++ADAEA++A + SA+GE     R      G+LKQ++  I  
Sbjct: 51  VYRRKVDQANRCRAQLRQAIADAEAQLAAICSAMGERPVHIRQSDQSVGSLKQELGRILP 110

Query: 68  ILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTH 127
            LE+++ +K +R  +F  +  QI  I+++I G G+ ++S +  +DE +L+++KL EL   
Sbjct: 111 ELEEMQKRKVERRNQFIVVMEQIDSITNDIKGQGELVHS-EPLIDETNLSMRKLEELHCQ 169

Query: 128 LRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQSKSISNDTI 187
           L+ LQ EK  R++ +  +L T++    VL ++F E V +V+P+LSD +    +S+S+ TI
Sbjct: 170 LQVLQKEKIDRVETIRKHLCTLYSHCSVLGMDFNEVVGQVNPTLSDPEG--PRSLSDHTI 227

Query: 188 ARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSSSVDEVS 247
            +L   +  L + K QR+Q+LQ L   +++LW+L++TP+ EQ++  H+T  +++S  E++
Sbjct: 228 EKLGAAVQKLMEVKIQRMQRLQDLATTMLELWNLMDTPIEEQQEYQHITCNIAASEHEIT 287

Query: 248 MLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILI 307
               L+ D I+ +E EV  L+E KASKMKELV K++ ELEEI +  H+   SD+A    I
Sbjct: 288 EANSLSEDFIKYVEAEVVRLDEVKASKMKELVLKKRSELEEICRKTHLLPVSDSAIDQTI 347

Query: 308 SLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDDYEKDENR 367
             I+SG VD + +L  ++  I+K KEEALSRK+IL++VEKW    +EE WL++Y +D+NR
Sbjct: 348 VAIESGIVDATMVLEHLEQHISKIKEEALSRKEILERVEKWLSACDEESWLEEYNRDDNR 407

Query: 368 YSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEEY 427
           Y+AGRGAH  LKRAEKAR L++KLP +VE L +K   WE E  I FLYD + LLS+LEEY
Sbjct: 408 YNAGRGAHLTLKRAEKARNLVTKLPGMVEALASKTIVWEQENGIEFLYDGIRLLSMLEEY 467

Query: 428 TAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMAGTPVGRRF 487
               Q+REEE RR R+QK+LQ Q  AEQEA+YGS+PS  KPL    +     G    RR 
Sbjct: 468 NILRQEREEEHRRQRDQKKLQGQLIAEQEALYGSKPSPSKPLGGKKAPRMSTGGASNRRL 527

Query: 488 TTPSGRH 494
           +  +  H
Sbjct: 528 SLGAAMH 534

Microtubule-associated protein that plays a critical role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs. Essential for the cytokinesis, especially in roots, by maintaining the integrity of the overlapped microtubules in the phragmoplast. Required during root morphogenesis. Needed for giant cell development during root knot nematode infection, where cytokinesis is initiated but not completed.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZY0|MA654_ARATH 65-kDa microtubule-associated protein 4 OS=Arabidopsis thaliana GN=MAP65-4 PE=1 SV=2

 Score =  334 bits (856), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 194/474 (40%), Positives = 305/474 (64%), Gaps = 11/474 (2%)

Query: 2   LLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALG--EHASFSRGKGTLK 59
           L ++E++CL +Y+RKVE   + KA+L + +A   AEIA + S++G  E  S SR    LK
Sbjct: 41  LADIEKECLSVYKRKVEEASRGKANLLKEIAVGRAEIAAIGSSMGGQEIHSNSRLGENLK 100

Query: 60  QQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVK 119
           +++  +   L+ LR +K +R+  F+ +  Q+ ++S ++      +    A+  E DL+++
Sbjct: 101 EELENVNVQLDGLRKRKAERMIRFNEVIDQLLKLSLQLGNPTDYLKKFAAE--ETDLSLQ 158

Query: 120 KLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQS 179
           +L EL++ L ELQNEK+ RL++V   L T++ L  VL  +F   +  +H SL DS    +
Sbjct: 159 RLEELRSQLGELQNEKSKRLEEVECLLKTLNSLCSVLGEDFKGMIRGIHSSLVDS---NT 215

Query: 180 KSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLV 239
           + +S  T+ +L  +I  L++ K QR+QK+Q L  +L++LW+LL+TP  EQ+   +VT  +
Sbjct: 216 RDVSRSTLDKLDMMIVNLREAKLQRMQKVQDLAVSLLELWNLLDTPAEEQKIFHNVTCSI 275

Query: 240 SSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDS 299
           + +  E++    L++  I+++E EV  L++ K +K+KE++ +++ ELEEI + +HM  + 
Sbjct: 276 ALTESEITEANILSVASIKRVEDEVIRLSKIKITKIKEVILRKRLELEEISRKMHMATEV 335

Query: 300 DAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLD 359
             +    +  I+SG  D   LL  +D +IAK KEEA SRK+IL+KVEKW    EEE WL+
Sbjct: 336 LKSENFSVEAIESGVKDPEQLLEQIDSEIAKVKEEASSRKEILEKVEKWMSACEEESWLE 395

Query: 360 DYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVP 419
           +Y +D+NRY+AGRGAH  LKRAEKAR+L++KLP +VE L AKV AWE E+   FLYD V 
Sbjct: 396 EYNRDDNRYNAGRGAHLTLKRAEKARLLVNKLPGMVEALTAKVTAWENERGNEFLYDGVR 455

Query: 420 LLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSI----KKPL 469
           +LS+L +Y    +++E EK+R R+ K+L  Q   EQEA+YGS+PS     KKPL
Sbjct: 456 VLSMLGQYKTVWEEKEHEKQRQRDMKKLHGQLITEQEALYGSKPSPNKSGKKPL 509

Microtubule-associated protein involved in mitotic spindle formation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q4PSA3|MA659_ARATH 65-kDa microtubule-associated protein 9 OS=Arabidopsis thaliana GN=MAP65-9 PE=2 SV=1

 Score =  310 bits (795), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 195/508 (38%), Positives = 315/508 (62%), Gaps = 29/508 (5%)

Query: 12  IYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSR--------GKG-TLKQQI 62
           +Y RK+E+ ++ K  + Q +AD+EA +  + S + E     R        G G +LK ++
Sbjct: 45  VYNRKIEKVKEEKIRIKQEIADSEARVIDICSVMEEPPILGRHHQSDQQSGNGRSLKDEL 104

Query: 63  SAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSIN---SVDAQVDECDLTVK 119
             I   LE++  +K +R  +F  +   I  +  EI  NG+S +   S D   DE DL+++
Sbjct: 105 VKILQKLEEMEKRKSERKIQFIQVIDDIRCVREEI--NGESDDETCSSDFSADESDLSLR 162

Query: 120 KLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQS 179
           KL EL   L  LQ +K  R++++ +N+ T+  L  VL +NF ETV ++HPSL D++   S
Sbjct: 163 KLEELHRELYTLQEQKRNRVKQIQDNIRTLESLCSVLGLNFRETVTKIHPSLVDTEG--S 220

Query: 180 KSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLV 239
           +SISN+T+ +L   +    + K QR+Q+LQ L   +++ W+L++TP  EQ+K   V+  +
Sbjct: 221 RSISNETLDKLASSVQQWHETKIQRMQELQDLVTTMLEFWNLMDTPAEEQQKFMDVSCNI 280

Query: 240 SSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDS 299
           +++V E++    L++D++E+++ E+  L E K SKMKELV K++ ELEEI +  H+ ++ 
Sbjct: 281 AATVSEITKPNSLSIDLLEEVKAELCRLEELKWSKMKELVLKKRSELEEICRRTHIVLEE 340

Query: 300 -DAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWL 358
            D A + +I  I+SG+V+  ++L  ++ +  K KEEALSRK+IL+K +KW +  EEE WL
Sbjct: 341 EDIAVENVIKAIESGDVNPENILEQIEYRAGKVKEEALSRKEILEKADKWLNACEEENWL 400

Query: 359 DDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKV 418
           ++Y +DENRY+AG+G+H  LKRAEKAR L++KLP++VE L +K+  WE+EK   FL+D  
Sbjct: 401 EEYNQDENRYNAGKGSHLILKRAEKARALVNKLPAMVEALASKITIWESEKEYEFLFDGN 460

Query: 419 PLLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRP-SIKKPLCQSTS--- 474
            LLS+LEEYT   +++E+E+RR R+ K+ Q Q  +EQ+    ++P S KK L  ST+   
Sbjct: 461 RLLSMLEEYTELREEKEQERRRKRDLKKHQGQVTSEQDKGSVTKPQSAKKGLKVSTNKRF 520

Query: 475 --------TNTMAGTPVGRRFTTPSGRH 494
                   T++       + F+TP  RH
Sbjct: 521 VSSPHTPQTDSPHSAKSNQSFSTPLSRH 548

Arabidopsis thaliana (taxid: 3702)

>sp|O43663|PRC1_HUMAN Protein regulator of cytokinesis 1 OS=Homo sapiens GN=PRC1 PE=1 SV=2

 Score = 74.7 bits (182), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 121/508 (23%), Positives = 223/508 (43%), Gaps = 76/508 (14%)

Query: 24  KADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQQISAIRSILEDLRSKKEQRIKEF 83
           K  L +S++  + E+  L S L        G+ T+ Q    +R+ +E +R +K++R +E 
Sbjct: 62  KERLIKSISVCQKELNTLCSELHVEPFQEEGETTILQLEKDLRTQVELMRKQKKERKQEL 121

Query: 84  SGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEKNLRLQKVN 143
             +Q Q  ++   +      I+S          ++++L + + H+  L+  K  R ++  
Sbjct: 122 KLLQEQDQELCEILCMPHYDIDSASVP------SLEELNQFRQHVTTLRETKASRREEFV 175

Query: 144 NNLSTIHELSLVLSINFLETVNEVHPSLSDSKNV-----QSKSISNDTIARLTGVIHLLK 198
           +    I     +L +  L+      P  S  ++V      +  +S + IA L  ++  L+
Sbjct: 176 SIKRQI-----ILCMEALDHT----PDTSFERDVVCEDEDAFCLSLENIATLQKLLRQLE 226

Query: 199 QEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSSSVDEVSMLGCLALDVIE 258
            +K Q     + L   + +LWD L+ P  E+   + V +++S S  +V           +
Sbjct: 227 MQKSQNEAVCEGLRTQIRELWDRLQIPEEER---EAVATIMSGSKAKVR----------K 273

Query: 259 QMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNVDLS 318
            +++EV+ L E K   MK+++   + EL + +        S   RQ           +  
Sbjct: 274 ALQLEVDRLEELKMQNMKKVIEAIRVELVQYWDQCFY---SQEQRQAFAPFCAEDYTE-- 328

Query: 319 DLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQW--LDDYEK---DENRYSAGRG 373
            LL   D +I + K      K++ + V+KW     EE W    ++E+   D NR++  RG
Sbjct: 329 SLLQLHDAEIVRLKNYYEVHKELFEGVQKW-----EETWRLFLEFERKASDPNRFT-NRG 382

Query: 374 AHKNLKRAEKARILISK-LPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEEYTA-QC 431
              NL + EK R  + K LP + E L A+++ WE E    F+ +    +    EY A Q 
Sbjct: 383 G--NLLKEEKQRAKLQKMLPKLEEELKARIELWEQEHSKAFMVNGQKFM----EYVAEQW 436

Query: 432 QKREEEKRRCREQKRLQEQFAAEQEAIYGS---RPSIKKPLCQST-------STNTMAGT 481
           +    EK R +++++L+ +   E E +YGS    PS ++ L  +T       +T TM+  
Sbjct: 437 EMHRLEKERAKQERQLKNKKQTETEMLYGSAPRTPSKRRGLAPNTPGKARKLNTTTMSNA 496

Query: 482 -------PV--GRRFTTPSGRHVISGGK 500
                  P+  G  + +P  R   SG K
Sbjct: 497 TANSSIRPIFGGTVYHSPVSRLPPSGSK 524

Key regulator of cytokinesis that cross-links antiparrallel microtubules at an average distance of 35 nM. Essential for controlling the spatiotemporal formation of the midzone and successful cytokinesis. Required for KIF14 localization to the central spindle and midbody. Required to recruit PLK1 to the spindle. Stimulates PLK1 phosphorylation of RACGAP1 to allow recruitment of ECT2 to the central spindle.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	527
224075886	571	predicted protein [Populus trichocarpa]	0.994	0.917	0.723	0.0
255569159	563	Protein regulator of cytokinesis, putati	0.990	0.927	0.730	0.0
359487120	561	PREDICTED: 65-kDa microtubule-associated	0.988	0.928	0.710	0.0
296087805	562	unnamed protein product [Vitis vinifera]	0.988	0.927	0.708	0.0
449458694	563	PREDICTED: 65-kDa microtubule-associated	0.988	0.925	0.698	0.0
356546308	567	PREDICTED: 65-kDa microtubule-associated	0.994	0.924	0.697	0.0
357515447	568	Protein regulator of cytokinesis [Medica	0.998	0.926	0.669	0.0
300681242	550	RecName: Full=65-kDa microtubule-associa	0.982	0.941	0.588	1e-169
297823759	550	predicted protein [Arabidopsis lyrata su	0.982	0.941	0.590	1e-169
15224935	587	microtubule-associated protein 65-5 [Ara	0.982	0.882	0.553	1e-163

>gi|224075886|ref|XP_002304813.1| predicted protein [Populus trichocarpa] gi|222842245|gb|EEE79792.1| predicted protein [Populus trichocarpa]

 Score =  751 bits (1939), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/528 (72%), Positives = 457/528 (86%), Gaps = 4/528 (0%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHAS-FS-RGKGTL 58
           MLL+LEQ+CLDIYRRKV+ TRKYKADLHQ LADA+AEIA LVSALGE+AS FS +GKG L
Sbjct: 43  MLLQLEQECLDIYRRKVKNTRKYKADLHQLLADAKAEIANLVSALGENASLFSPKGKGPL 102

Query: 59  KQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTV 118
           KQQISA+  +L++LR KK++R+K+F   + QIA+I +EIAG+ +S +S D ++DE DLTV
Sbjct: 103 KQQISAVNPVLDELRLKKQERMKDFYETETQIARICAEIAGSDRSFDSADPEIDERDLTV 162

Query: 119 KKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQ 178
           K+LGELK+HL+ELQNEK+LRLQKVN+++ T+H+LS+V+SI+F +TVN+VHPSLSD    Q
Sbjct: 163 KRLGELKSHLKELQNEKSLRLQKVNSSIKTVHDLSVVMSIDFFKTVNDVHPSLSDPSKAQ 222

Query: 179 SKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSL 238
           SKSISNDT+ARLT  IH LKQEKQQRL+KLQ LG+ LI+LWDL++TPV+E R++DHVT+L
Sbjct: 223 SKSISNDTLARLTSTIHSLKQEKQQRLEKLQGLGHKLIELWDLMDTPVDE-RRLDHVTTL 281

Query: 239 VSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVD 298
           +S+SVD VS LGCLA+DVIEQ EVEVE LN  KASKMKELVFKRQ+ELEEIY+GVHMDVD
Sbjct: 282 ISASVDNVSRLGCLAVDVIEQTEVEVERLNALKASKMKELVFKRQNELEEIYRGVHMDVD 341

Query: 299 SDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWL 358
           SDAARQILISLI+SGN ++S+LL+SMDDQI KAKE+ALSRKDILDKVEKWK  +EEEQWL
Sbjct: 342 SDAARQILISLIESGNAEMSELLASMDDQITKAKEQALSRKDILDKVEKWKFASEEEQWL 401

Query: 359 DDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKV 418
           D+YEKD+NRYSAGRGAH+NLKRAEKAR L+SK+PS+VE+L +KVKAWE E+++PFLY K 
Sbjct: 402 DEYEKDDNRYSAGRGAHRNLKRAEKARALVSKIPSMVESLTSKVKAWELERKVPFLYYKA 461

Query: 419 PLLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTM 478
           PLL  LEEYT   ++REEEKRR REQKRLQEQFAAEQEA+YGSR +IKKPL  STS NTM
Sbjct: 462 PLLHTLEEYTVLRREREEEKRRSREQKRLQEQFAAEQEALYGSRSAIKKPLGLSTSANTM 521

Query: 479 AGTPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDDSVS 526
           AGTP  RR  TP G H  S GK+RRES R     P+NYVALPKDDSVS
Sbjct: 522 AGTPTARRGVTPFGHHASSAGKQRRES-RAHNVTPINYVALPKDDSVS 568

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569159|ref|XP_002525548.1| Protein regulator of cytokinesis, putative [Ricinus communis] gi|223535127|gb|EEF36807.1| Protein regulator of cytokinesis, putative [Ricinus communis]

 Score =  741 bits (1913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/526 (73%), Positives = 447/526 (84%), Gaps = 4/526 (0%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQ 60
           MLL+LEQ+CLDIYRRKVE TRKYKADL  SLADAEAEI+ ++SALGE+ SFSRGKGTLKQ
Sbjct: 39  MLLQLEQECLDIYRRKVELTRKYKADLLLSLADAEAEISHIISALGENVSFSRGKGTLKQ 98

Query: 61  QISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKK 120
           QISA++  LEDLR KK+ R+K+F+  Q QIA+I +EI G   S   +D QVDE DLTV++
Sbjct: 99  QISALKPALEDLRLKKQGRMKDFNETQMQIARIHAEINGTEYSSKLIDPQVDENDLTVRR 158

Query: 121 LGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQSK 180
           LGEL++HL+ELQNEK+LRLQKVN+N+S IH+LS+V+SI+FL TVN+++PSL+D  N QSK
Sbjct: 159 LGELQSHLKELQNEKSLRLQKVNSNISIIHDLSVVMSIDFLNTVNDINPSLTDLTNGQSK 218

Query: 181 SISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVS 240
           SISND +ARLTGVIH LKQEK+ RLQKLQ LG  L +LW+L++TPV EQ++ D+ T L+S
Sbjct: 219 SISNDILARLTGVIHSLKQEKKLRLQKLQVLGCKLTELWNLMDTPVEEQKRWDYATFLIS 278

Query: 241 SSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSD 300
           +SVD+ S  GCLAL+VIEQ EVEVE LN  K SK+KELVFKRQ+ELEEIY+GVHMDVD D
Sbjct: 279 ASVDDASRPGCLALEVIEQAEVEVERLNVLKVSKLKELVFKRQNELEEIYRGVHMDVDGD 338

Query: 301 AARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDD 360
           AARQILISLI+SGN DL+DLLSSMDDQI KAK++ALSRKDIL++VEKWK  +EEEQWLD+
Sbjct: 339 AARQILISLIESGNADLADLLSSMDDQIRKAKDQALSRKDILERVEKWKCASEEEQWLDE 398

Query: 361 YEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPL 420
           YE+DENRY+AGRGAHKNLKRAEKARIL+SK+PS+VENL AKVKAWE EK I FLYDK PL
Sbjct: 399 YERDENRYNAGRGAHKNLKRAEKARILVSKIPSIVENLTAKVKAWELEKGISFLYDKAPL 458

Query: 421 LSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMAG 480
           L  LEEYT   Q+REEEKRR REQKR QEQFAAEQEA+YGSRP  KKPL QSTS NTMAG
Sbjct: 459 LKTLEEYTEMRQEREEEKRRSREQKRQQEQFAAEQEALYGSRP--KKPLGQSTSANTMAG 516

Query: 481 TPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDDSVS 526
           TP GRR  TP GRHVIS GKERRES R     P+NYVALPKDDS S
Sbjct: 517 TPTGRRVATP-GRHVISAGKERRES-RFHNATPINYVALPKDDSAS 560

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487120|ref|XP_002265814.2| PREDICTED: 65-kDa microtubule-associated protein 5-like [Vitis vinifera]

 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/521 (71%), Positives = 450/521 (86%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQ 60
           MLL+LEQ+CLDIYRRKVE+T+K++ADL Q+L +AE E++ LVSALGEHA+F + KGTL +
Sbjct: 40  MLLQLEQECLDIYRRKVEKTKKHRADLCQTLNEAETEVSSLVSALGEHANFVQEKGTLHE 99

Query: 61  QISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKK 120
           Q+SAI+ +LEDLR KK++R+KEFS  Q QI +I +EIAGN QSINSV+AQV+E DLT+KK
Sbjct: 100 QLSAIKPVLEDLRMKKQERMKEFSETQSQIVRICAEIAGNIQSINSVNAQVNERDLTMKK 159

Query: 121 LGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQSK 180
           LG LK++L+ELQ+EK LRLQKVN++++TIHELS+V+SI+F++T+ EVHP+L D  + Q +
Sbjct: 160 LGGLKSYLQELQSEKILRLQKVNSHVNTIHELSVVMSIDFVKTIIEVHPTLVDPSHGQMR 219

Query: 181 SISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVS 240
           SISNDT+ARLTG+IH LK+EK QRLQKLQ LG+ L++LW+LL+T V+EQ++  HVT L+S
Sbjct: 220 SISNDTLARLTGMIHSLKEEKLQRLQKLQDLGSTLMELWNLLDTSVDEQKQFKHVTCLIS 279

Query: 241 SSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSD 300
           SS+DEV   GCLALDVIEQ EVE+E L   KASKMKELV KRQ+ELEEIY+GVHMD+D+D
Sbjct: 280 SSIDEVVRQGCLALDVIEQTEVEIERLKVLKASKMKELVLKRQNELEEIYRGVHMDLDTD 339

Query: 301 AARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDD 360
           AARQ L+SLIDSGNVDLSDLLS +DDQI KAKE+ALSRKDILDKVEKWK+ ++EE WLDD
Sbjct: 340 AARQTLVSLIDSGNVDLSDLLSGIDDQIVKAKEQALSRKDILDKVEKWKYASDEENWLDD 399

Query: 361 YEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPL 420
           YE+DENRYSAGRGAHKNLKRAEKARIL+SK+PS+VENL AKVKAWE EK +PF YDKVPL
Sbjct: 400 YERDENRYSAGRGAHKNLKRAEKARILVSKIPSIVENLTAKVKAWEMEKGMPFFYDKVPL 459

Query: 421 LSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMAG 480
           L  LEEY    Q+REEEKRR REQKRLQEQFA EQEA++GS+P+ KKPL QST+ NT+AG
Sbjct: 460 LQTLEEYIVLRQEREEEKRRSREQKRLQEQFATEQEALFGSKPTTKKPLGQSTNANTLAG 519

Query: 481 TPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPK 521
           TPVGRR +TPS RH +S GKERR+S R    IP NYVALPK
Sbjct: 520 TPVGRRVSTPSSRHGVSAGKERRDSGRGGTTIPPNYVALPK 560

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087805|emb|CBI35061.3| unnamed protein product [Vitis vinifera]

 Score =  733 bits (1893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/522 (70%), Positives = 450/522 (86%), Gaps = 1/522 (0%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASF-SRGKGTLK 59
           MLL+LEQ+CLDIYRRKVE+T+K++ADL Q+L +AE E++ LVSALGEHA+F  + KGTL 
Sbjct: 40  MLLQLEQECLDIYRRKVEKTKKHRADLCQTLNEAETEVSSLVSALGEHANFVQKEKGTLH 99

Query: 60  QQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVK 119
           +Q+SAI+ +LEDLR KK++R+KEFS  Q QI +I +EIAGN QSINSV+AQV+E DLT+K
Sbjct: 100 EQLSAIKPVLEDLRMKKQERMKEFSETQSQIVRICAEIAGNIQSINSVNAQVNERDLTMK 159

Query: 120 KLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQS 179
           KLG LK++L+ELQ+EK LRLQKVN++++TIHELS+V+SI+F++T+ EVHP+L D  + Q 
Sbjct: 160 KLGGLKSYLQELQSEKILRLQKVNSHVNTIHELSVVMSIDFVKTIIEVHPTLVDPSHGQM 219

Query: 180 KSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLV 239
           +SISNDT+ARLTG+IH LK+EK QRLQKLQ LG+ L++LW+LL+T V+EQ++  HVT L+
Sbjct: 220 RSISNDTLARLTGMIHSLKEEKLQRLQKLQDLGSTLMELWNLLDTSVDEQKQFKHVTCLI 279

Query: 240 SSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDS 299
           SSS+DEV   GCLALDVIEQ EVE+E L   KASKMKELV KRQ+ELEEIY+GVHMD+D+
Sbjct: 280 SSSIDEVVRQGCLALDVIEQTEVEIERLKVLKASKMKELVLKRQNELEEIYRGVHMDLDT 339

Query: 300 DAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLD 359
           DAARQ L+SLIDSGNVDLSDLLS +DDQI KAKE+ALSRKDILDKVEKWK+ ++EE WLD
Sbjct: 340 DAARQTLVSLIDSGNVDLSDLLSGIDDQIVKAKEQALSRKDILDKVEKWKYASDEENWLD 399

Query: 360 DYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVP 419
           DYE+DENRYSAGRGAHKNLKRAEKARIL+SK+PS+VENL AKVKAWE EK +PF YDKVP
Sbjct: 400 DYERDENRYSAGRGAHKNLKRAEKARILVSKIPSIVENLTAKVKAWEMEKGMPFFYDKVP 459

Query: 420 LLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMA 479
           LL  LEEY    Q+REEEKRR REQKRLQEQFA EQEA++GS+P+ KKPL QST+ NT+A
Sbjct: 460 LLQTLEEYIVLRQEREEEKRRSREQKRLQEQFATEQEALFGSKPTTKKPLGQSTNANTLA 519

Query: 480 GTPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPK 521
           GTPVGRR +TPS RH +S GKERR+S R    IP NYVALPK
Sbjct: 520 GTPVGRRVSTPSSRHGVSAGKERRDSGRGGTTIPPNYVALPK 561

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458694|ref|XP_004147082.1| PREDICTED: 65-kDa microtubule-associated protein 5-like [Cucumis sativus] gi|449516970|ref|XP_004165519.1| PREDICTED: 65-kDa microtubule-associated protein 5-like [Cucumis sativus]

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/527 (69%), Positives = 439/527 (83%), Gaps = 6/527 (1%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGE-HASFSRGKGTLK 59
           MLL+LEQ+CLDIYRRKVE+TRKYKADLHQ LA+AE EIA + SALGE  +SFSRG+GTLK
Sbjct: 39  MLLQLEQECLDIYRRKVEKTRKYKADLHQQLAEAETEIAGIASALGEGFSSFSRGRGTLK 98

Query: 60  QQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVK 119
           +Q+ AI+ ILE+LRSKK  R+KEFS +Q QI  I SEIAG+GQS + VD Q+ E DLT K
Sbjct: 99  EQVVAIKLILEELRSKKRGRLKEFSEVQLQIVSICSEIAGSGQSKSYVDPQIHEHDLTAK 158

Query: 120 KLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQS 179
           KL ELK HL+ELQNEK+LRLQKVN N+S IHELS+V+S++FL+TVNEVHPSL D K+  S
Sbjct: 159 KLSELKLHLQELQNEKHLRLQKVNTNISLIHELSVVMSMDFLKTVNEVHPSLGDPKSGPS 218

Query: 180 KSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLV 239
           +SISNDT+ARL GVI+ LKQEKQ+RLQKLQ LG  L  LW+L++ P +E+++ DH T L+
Sbjct: 219 RSISNDTLARLNGVINSLKQEKQERLQKLQDLGRRLTGLWNLMDAPADERKRFDHATCLM 278

Query: 240 SSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDS 299
           SSSV+EVS  GCLALD+IEQ+EVEVE LN  K SKM+EL+FKRQ ELEEIY+GVHMD+DS
Sbjct: 279 SSSVEEVSAKGCLALDIIEQVEVEVERLNILKTSKMRELIFKRQTELEEIYEGVHMDIDS 338

Query: 300 DAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLD 359
           DAAR+ L SLIDS NVDLS+LLSSMDDQ+++AKE+ALSRKDILDKVEKW+   +EE+WL+
Sbjct: 339 DAARKTLTSLIDSSNVDLSNLLSSMDDQVSEAKEQALSRKDILDKVEKWQFALQEEKWLE 398

Query: 360 DYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVP 419
           DYE+D+NRYSAGRGAHKNLKRAEKAR+L++KL S+VE+L AKVKAWE+EK I F Y+KVP
Sbjct: 399 DYERDDNRYSAGRGAHKNLKRAEKARVLVTKLHSMVESLAAKVKAWESEKGITFSYEKVP 458

Query: 420 LLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMA 479
           LL  LEE     Q+REE KR+ REQKRLQEQ A+EQEA+YGS+P  KKPL QS   NTM 
Sbjct: 459 LLRTLEEDAKLRQEREEGKRKSREQKRLQEQLASEQEALYGSKPIPKKPLGQS---NTML 515

Query: 480 GTPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDDSVS 526
           GTP GRR  TP GR+  SG K+RRES RV   IP+NYVALPKDDS S
Sbjct: 516 GTP-GRRIGTP-GRYGFSGSKDRRESGRVPNIIPVNYVALPKDDSAS 560

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546308|ref|XP_003541570.1| PREDICTED: 65-kDa microtubule-associated protein 5-like [Glycine max]

 Score =  708 bits (1828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/526 (69%), Positives = 440/526 (83%), Gaps = 2/526 (0%)

Query: 2   LLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQQ 61
           LL+LEQ+CLDIY R+VE TRK+KADL+Q LA+AEAE+A +VS+LGE     RGKGTLKQQ
Sbjct: 40  LLQLEQECLDIYHRRVEETRKHKADLYQWLAEAEAEVANIVSSLGECTILPRGKGTLKQQ 99

Query: 62  ISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKKL 121
           I+ IR ++EDLRSKK+ RIKEFS I+ QI+QI +EIAG GQ  NSV    ++ DLT KKL
Sbjct: 100 IATIRPVIEDLRSKKDDRIKEFSKIKSQISQICAEIAGCGQ-YNSVTDSDNQSDLTTKKL 158

Query: 122 GELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQSKS 181
            ELK+HL+ELQNEK LR QKV +++STI EL++V+S++F ET+NE+HPSL DS     +S
Sbjct: 159 RELKSHLQELQNEKILRQQKVKSHISTISELTVVMSMDFRETLNEIHPSLGDSSKGTLQS 218

Query: 182 ISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSS 241
           ISNDT+ARLTGVIH LK+EKQ+RLQK+Q L   L++LW+L+ETP+ +Q+   HVT L+S+
Sbjct: 219 ISNDTLARLTGVIHSLKREKQKRLQKIQELAKLLVELWELMETPIEDQQAFSHVTRLISA 278

Query: 242 SVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDA 301
           SVDEVS   CL+ +VIEQ+EVEV+ LN  KASKMK+LVFKRQ+ELEEIY+GVHMDVDS+A
Sbjct: 279 SVDEVSTECCLSAEVIEQVEVEVQRLNVVKASKMKDLVFKRQNELEEIYRGVHMDVDSEA 338

Query: 302 ARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDDY 361
           ARQIL SLI+SGN+DLSDLL SMDDQI +AKE+ALSR+DILD+VEKWK  AEEE+WLD+Y
Sbjct: 339 ARQILTSLIESGNIDLSDLLQSMDDQIRQAKEQALSRRDILDRVEKWKFAAEEEKWLDEY 398

Query: 362 EKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPLL 421
           E+DENRYSA RGAHKNLKRAEKARIL+SKLPS+VENL AKVKAWE EK IPFLY+KVPLL
Sbjct: 399 ERDENRYSAVRGAHKNLKRAEKARILVSKLPSIVENLTAKVKAWEMEKGIPFLYEKVPLL 458

Query: 422 SILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMAGT 481
             L+EY  Q Q REEEKR+ REQKRLQEQ A EQEA++GSR + KKPL QST  NT+ GT
Sbjct: 459 HNLDEYIVQRQLREEEKRKYREQKRLQEQHAVEQEALFGSRSATKKPLGQSTHANTILGT 518

Query: 482 PVGRR-FTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDDSVS 526
           P GRR  +TPSGRH  SGGK+RRES RV   IP+NYVALPKDDSVS
Sbjct: 519 PTGRRMLSTPSGRHGNSGGKDRRESGRVNSIIPVNYVALPKDDSVS 564

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357515447|ref|XP_003628012.1| Protein regulator of cytokinesis [Medicago truncatula] gi|355522034|gb|AET02488.1| Protein regulator of cytokinesis [Medicago truncatula]

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/527 (66%), Positives = 435/527 (82%), Gaps = 1/527 (0%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHA-SFSRGKGTLK 59
           MLL+LEQ+CLDIY RKVE+TRK+KADL++ L DAE+E+A +VS+LG+   S SRGKGTLK
Sbjct: 39  MLLQLEQECLDIYYRKVEQTRKHKADLNKWLDDAESELADIVSSLGDDCVSISRGKGTLK 98

Query: 60  QQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVK 119
           QQ++ IR +LEDL+S+K +R++E   I+ QI+QI +EIAG GQS    D  VD+CDLT++
Sbjct: 99  QQLANIRPVLEDLKSRKAERVEEILEIKSQISQICAEIAGCGQSKGVTDQDVDQCDLTME 158

Query: 120 KLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQS 179
           KLGELK+HL ELQNEK LR QKV +++STI E+S V+SI+  +T+N++HPSLS S N   
Sbjct: 159 KLGELKSHLHELQNEKILRQQKVKSHISTISEISAVMSIDIWKTLNDIHPSLSGSSNGAP 218

Query: 180 KSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLV 239
           + ISNDT+ARLTGV+  LKQEKQQRLQK+Q L   L++LWDL+E P++EQ+   HVT L+
Sbjct: 219 QCISNDTLARLTGVVLSLKQEKQQRLQKVQELVKFLVELWDLMEIPIDEQKAFSHVTRLI 278

Query: 240 SSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDS 299
           S+SVDEVS  G L+ DVIEQ+EVEV+ LN  KASKMKELVFKRQ+ELEEIY+GVHMD+DS
Sbjct: 279 SASVDEVSTQGGLSADVIEQVEVEVQQLNVLKASKMKELVFKRQNELEEIYRGVHMDMDS 338

Query: 300 DAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLD 359
           +AARQ L SL +SGNVD+S+LL SMD+QI KAKE+ALSR+DILD+VEKWK  AEEE+WLD
Sbjct: 339 EAARQTLTSLTESGNVDMSELLQSMDEQIRKAKEQALSRRDILDRVEKWKFAAEEEKWLD 398

Query: 360 DYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVP 419
           +YE+D+NRYSA +GAHKNLKRAEKARIL+SK+PSVVENL AKVKAWE EK IPFLY+KV 
Sbjct: 399 EYERDQNRYSAVKGAHKNLKRAEKARILVSKIPSVVENLTAKVKAWETEKGIPFLYEKVL 458

Query: 420 LLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMA 479
           LL+ L+EY  Q Q REEEKR+ REQKRL EQ A EQEA++GS+ + KKPL QS+  NT+A
Sbjct: 459 LLNSLDEYNVQRQLREEEKRKSREQKRLNEQLAVEQEAMFGSKSATKKPLNQSSHVNTLA 518

Query: 480 GTPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDDSVS 526
           GTP GRR  TPSGR+  SG K+RRES RV   IP+NYVAL KDDSVS
Sbjct: 519 GTPNGRRMHTPSGRYGTSGAKDRRESGRVNNIIPVNYVALAKDDSVS 565

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300681242|sp|Q9ZVJ3.2|MA655_ARATH RecName: Full=65-kDa microtubule-associated protein 5; Short=AtMAP65-5

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 308/523 (58%), Positives = 401/523 (76%), Gaps = 5/523 (0%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQ 60
           MLLELEQ+CLDIY +KVE+TRK++A+L +SLA AEAEIA L+SALGE  SF++ +G+LK+
Sbjct: 33  MLLELEQECLDIYNKKVEKTRKFRAELQRSLAQAEAEIASLMSALGEKVSFAKKEGSLKE 92

Query: 61  QISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKK 120
           QIS+++ +LEDL  KK++R KE S    QIA+I+S IAGN  +++S  ++VDE DLT +K
Sbjct: 93  QISSVKPVLEDLLMKKDRRRKELSETLNQIAEITSNIAGNDYTVSS-GSEVDESDLTQRK 151

Query: 121 LGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQSK 180
           L EL+  L++L+NEK +RLQKVN+ +S +HELS +LS +F + +N VH SL++     SK
Sbjct: 152 LDELRADLQDLRNEKAVRLQKVNSYISAVHELSEILSFDFSKALNSVHSSLTEFSKTHSK 211

Query: 181 SISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVS 240
           SISNDT+AR T ++  LK EK +RL KLQ LG ++ +LW+L+ETP++E+R+ DH +SL+S
Sbjct: 212 SISNDTLARFTELVKSLKAEKHERLLKLQGLGRSMQELWNLMETPMDERRRFDHCSSLLS 271

Query: 241 SSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSD 300
           S  D+    GCL+LD+I + E EV  LN  K+SKMKELVFKRQ ELEEI +G HMD++SD
Sbjct: 272 SLPDDALKKGCLSLDIIREAEDEVRRLNSLKSSKMKELVFKRQCELEEICRGNHMDINSD 331

Query: 301 AARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDD 360
           AAR+ L+ LI+SG+ DLSD+L+S+D QI KA+EEALSRK+ILDKV+KW+H  EEE WLDD
Sbjct: 332 AARKSLVELIESGDGDLSDILASIDGQIEKAREEALSRKEILDKVDKWRHAKEEETWLDD 391

Query: 361 YEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPL 420
           YEKDENR+SA RGAHKNLKRAEKAR LISK+P++V+ L  KVKAWE E+ +PFL DK PL
Sbjct: 392 YEKDENRFSAVRGAHKNLKRAEKARSLISKIPAMVDVLTTKVKAWEKERGVPFLCDKQPL 451

Query: 421 LSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMAG 480
           L  LE+      +REEEKR+ REQKRLQ Q A E+EA YGS+ + KKPL QS +T+ +  
Sbjct: 452 LQTLEDDIVIRAQREEEKRQFREQKRLQGQLATEKEAKYGSKSAKKKPLGQSLNTDNVTK 511

Query: 481 TPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDD 523
           TP+GRR     GR V SGGK+     R    IPLNYVAL KDD
Sbjct: 512 TPIGRRIGNTPGRSVTSGGKD----YRGNAVIPLNYVALQKDD 550

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823759|ref|XP_002879762.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297325601|gb|EFH56021.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 309/523 (59%), Positives = 396/523 (75%), Gaps = 5/523 (0%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQ 60
           MLLELEQ+CLDIY +KVE+TRKY+A+L +SLA AEAEIA L+SALGE  SF + +G+LK+
Sbjct: 33  MLLELEQECLDIYNKKVEKTRKYRAELQRSLAQAEAEIASLMSALGEKVSFPKKEGSLKE 92

Query: 61  QISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKK 120
           QISA++ +LEDL  KK++R KE S  Q QI +ISS IAGN  ++ S   ++DE DLT +K
Sbjct: 93  QISAVKPVLEDLLMKKDRRRKELSETQTQIEEISSNIAGNDYTVCS-GPEIDESDLTQRK 151

Query: 121 LGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQSK 180
           L EL+  L++L+NEK +RLQKVN+ +S +HELS ++S +F + +N VH SL+D     SK
Sbjct: 152 LDELRERLQDLRNEKAVRLQKVNSYISAVHELSEIMSFDFSKALNNVHSSLADFSKTHSK 211

Query: 181 SISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVS 240
           SISNDT+ARLT ++  LK+EK +RL KLQ LG ++ +LW+L+ETP++E+R+ DH +SL+S
Sbjct: 212 SISNDTLARLTELVKSLKEEKHERLLKLQGLGRSMQELWNLMETPMHERRRFDHCSSLLS 271

Query: 241 SSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSD 300
              DE    GCL LD+I + E EV+ LN  K+SKMKELVFKRQ ELEEI +G HMD++SD
Sbjct: 272 GPPDEAMKKGCLGLDIIREAEDEVKRLNALKSSKMKELVFKRQCELEEICRGNHMDINSD 331

Query: 301 AARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDD 360
           AAR+ L+ LI+SG+ DLSD+L+ +D QI KA+EEALSRK+ILDKV+KW+H  EEE WLDD
Sbjct: 332 AARKSLVDLIESGDGDLSDILARIDGQIEKAREEALSRKEILDKVDKWRHAKEEETWLDD 391

Query: 361 YEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDKVPL 420
           YEKDENR+SA RGAHKNLKRAEKAR LISK+P++V+ L  KVKAWE E+ +PFL DK PL
Sbjct: 392 YEKDENRFSAVRGAHKNLKRAEKARSLISKIPAMVDVLTTKVKAWEKERGVPFLCDKQPL 451

Query: 421 LSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMAG 480
           L  LEE      +REEEKR+ REQKRLQ Q A E+EA YGS+ + KK L QS +T+ +  
Sbjct: 452 LQTLEEDIVIRAQREEEKRQFREQKRLQGQLATEKEAKYGSKSAKKKQLGQSLNTDNVTK 511

Query: 481 TPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDD 523
           TP+GRR     GR   SGGK+     R    IPLNYVAL KDD
Sbjct: 512 TPIGRRIGNTPGRSATSGGKD----YRGNAVIPLNYVALQKDD 550

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15224935|ref|NP_181406.1| microtubule-associated protein 65-5 [Arabidopsis thaliana] gi|3786000|gb|AAC67346.1| hypothetical protein [Arabidopsis thaliana] gi|330254483|gb|AEC09577.1| microtubule-associated protein 65-5 [Arabidopsis thaliana]

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 310/560 (55%), Positives = 401/560 (71%), Gaps = 42/560 (7%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGK-GTLK 59
           MLLELEQ+CLDIY +KVE+TRK++A+L +SLA AEAEIA L+SALGE  SF++ K G+LK
Sbjct: 33  MLLELEQECLDIYNKKVEKTRKFRAELQRSLAQAEAEIASLMSALGEKVSFAKKKEGSLK 92

Query: 60  QQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVK 119
           +QIS+++ +LEDL  KK++R KE S    QIA+I+S IAGN  +++S  ++VDE DLT +
Sbjct: 93  EQISSVKPVLEDLLMKKDRRRKELSETLNQIAEITSNIAGNDYTVSS-GSEVDESDLTQR 151

Query: 120 KLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQS 179
           KL EL+  L++L+NEK +RLQKVN+ +S +HELS +LS +F + +N VH SL++     S
Sbjct: 152 KLDELRADLQDLRNEKAVRLQKVNSYISAVHELSEILSFDFSKALNSVHSSLTEFSKTHS 211

Query: 180 KSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLV 239
           KSISNDT+AR T ++  LK EK +RL KLQ LG ++ +LW+L+ETP++E+R+ DH +SL+
Sbjct: 212 KSISNDTLARFTELVKSLKAEKHERLLKLQGLGRSMQELWNLMETPMDERRRFDHCSSLL 271

Query: 240 SSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDS 299
           SS  D+    GCL+LD+I + E EV  LN  K+SKMKELVFKRQ ELEEI +G HMD++S
Sbjct: 272 SSLPDDALKKGCLSLDIIREAEDEVRRLNSLKSSKMKELVFKRQCELEEICRGNHMDINS 331

Query: 300 DAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLD 359
           DAAR+ L+ LI+SG+ DLSD+L+S+D QI KA+EEALSRK+ILDKV+KW+H  EEE WLD
Sbjct: 332 DAARKSLVELIESGDGDLSDILASIDGQIEKAREEALSRKEILDKVDKWRHAKEEETWLD 391

Query: 360 DYEKDENRYSAGRGAHKNLKRAEKARILISKLP--------------------------- 392
           DYEKDENR+SA RGAHKNLKRAEKAR LISK+P                           
Sbjct: 392 DYEKDENRFSAVRGAHKNLKRAEKARSLISKIPVFKQFNKKFWALLFSPKQLFKFSNSII 451

Query: 393 ---------SVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEEYTAQCQKREEEKRRCRE 443
                    S+V+ L  KVKAWE E+ +PFL DK PLL  LE+      +REEEKR+ RE
Sbjct: 452 DYCENSTTHSMVDVLTTKVKAWEKERGVPFLCDKQPLLQTLEDDIVIRAQREEEKRQFRE 511

Query: 444 QKRLQEQFAAEQEAIYGSRPSIKKPLCQSTSTNTMAGTPVGRRFTTPSGRHVISGGKERR 503
           QKRLQ Q A E+EA YGS+ + KKPL QS +T+ +  TP+GRR     GR V SGGK+  
Sbjct: 512 QKRLQGQLATEKEAKYGSKSAKKKPLGQSLNTDNVTKTPIGRRIGNTPGRSVTSGGKD-- 569

Query: 504 ESIRVTKPIPLNYVALPKDD 523
              R    IPLNYVAL KDD
Sbjct: 570 --YRGNAVIPLNYVALQKDD 587

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	527
TAIR|locus:2116267	578	MAP65-2 "AT4G26760" [Arabidops	0.982	0.896	0.442	1.1e-110
TAIR|locus:2006737	603	MAP65-7 "AT1G14690" [Arabidops	0.998	0.872	0.402	1.1e-96
TAIR|locus:2059713	608	ATMAP65-6 [Arabidopsis thalian	0.998	0.865	0.387	1.3e-93
TAIR|locus:2153152	707	PLE "AT5G51600" [Arabidopsis t	0.931	0.694	0.395	5.7e-91
TAIR|locus:2167978	549	MAP65-9 "microtubule-associate	0.933	0.896	0.353	3e-78
UNIPROTKB|F8W9B5	566	PRC1 "Protein regulator of cyt	0.299	0.279	0.248	6.4e-08
UNIPROTKB|H9KV59	606	PRC1 "Protein regulator of cyt	0.299	0.260	0.248	7.7e-08
UNIPROTKB|O43663	620	PRC1 "Protein regulator of cyt	0.299	0.254	0.248	8.1e-08
UNIPROTKB|F1MRT3	605	PRC1 "Uncharacterized protein"	0.313	0.272	0.237	2.2e-07
MGI|MGI:1858961	603	Prc1 "protein regulator of cyt	0.447	0.391	0.220	3.2e-07

TAIR|locus:2116267 MAP65-2 "AT4G26760" [Arabidopsis thaliana (taxid:3702)]

 Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
 Identities = 237/535 (44%), Positives = 337/535 (62%)

Query:     1 MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFS---RGKGT 57
             +LL++E++CL++Y++KVE   K +A+L Q+L+DA  E++ L +ALGE +      +  GT
Sbjct:    40 LLLQIEEECLNVYKKKVELAAKSRAELLQTLSDATVELSNLTTALGEKSYIDIPDKTSGT 99

Query:    58 LKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLT 117
             +K+Q+SAI   LE L  +KE+R++ FS +Q QI +I  EIAG    +N+    VDE DL+
Sbjct:   100 IKEQLSAIAPALEQLWQQKEERVRAFSDVQSQIQKICEEIAGG---LNNGPHVVDETDLS 156

Query:   118 VKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNV 177
             +K+L + +  L+ELQ EK+ RLQKV   +ST+H+L  VL ++FL TV EVHPSL ++  V
Sbjct:   157 LKRLDDFQRKLQELQKEKSDRLQKVLEFVSTVHDLCAVLRLDFLSTVTEVHPSLDEANGV 216

Query:   178 QSKSISNDTIARLTGVIHXXXXXXXXXXXXXXXXGNALIKLWDLLETPVNEQRKVDHVTS 237
             Q+KSISN+T+ARL   +                    L  LW+L++T   E+   DHVTS
Sbjct:   217 QTKSISNETLARLAKTVLTLKEDKMQRLKKLQELATQLTDLWNLMDTSDEERELFDHVTS 276

Query:   238 LVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDV 297
              +S+SV EV+  G LALD+IEQ EVEV+ L++ K+S+MKE+ FK+Q ELEEIY   H+++
Sbjct:   277 NISASVHEVTASGALALDLIEQAEVEVDRLDQLKSSRMKEIAFKKQSELEEIYARAHIEI 336

Query:   298 DSDAARQILISLIDSGNVXXXXXXXXXXXQIAKAKEEALSRKDILDKVEKWKHGAEEEQW 357
               +  R+ ++SLID+GN            QIAKAKEEA SRK+ILD+VEKW    EEE W
Sbjct:   337 KPEVVRERIMSLIDAGNTEPTELLADMDSQIAKAKEEAFSRKEILDRVEKWMSACEEESW 396

Query:   358 LDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYDK 417
             L+DY +D+NRYSA RGAH NLKRAEKARIL+SK+ ++V+ LIAK +AWE E  + F YD 
Sbjct:   397 LEDYNRDQNRYSASRGAHLNLKRAEKARILVSKITAMVDTLIAKTRAWEEENSMSFEYDG 456

Query:   418 VPLLSILEEYTAXXXXXXXXXXXXXXXXXXXXXFAAEQEAIYGSRPSIKKPLC--QSTST 475
             VPLL++L+EYT                         +QE+ +GS+PS  +P+   +   T
Sbjct:   457 VPLLAMLDEYTMLRQEREDEKRRLKEQKKQQEQPHTDQESAFGSKPSPARPVSAKKPVGT 516

Query:   476 NTMAG----TPVGRRFTTPSGRHVISGGKERRESIRVTKPIPLNYVALPKDDSVS 526
                 G    TP+ RR +  S ++   G K +R+S+      P N VA  KDD+ S
Sbjct:   517 RVNGGGLNETPM-RRLSMNSNQN---GSKSKRDSLNKIAS-PSNIVANTKDDAAS 566

GO:0003674 "molecular_function" evidence=ND

GO:0009524 "phragmoplast" evidence=IDA

GO:0009574 "preprophase band" evidence=IDA

GO:0055028 "cortical microtubule" evidence=IDA

GO:0000910 "cytokinesis" evidence=IGI

GO:0005819 "spindle" evidence=IDA

GO:0005874 "microtubule" evidence=IDA

GO:0008283 "cell proliferation" evidence=IGI;RCA

GO:0048528 "post-embryonic root development" evidence=IGI

GO:0072686 "mitotic spindle" evidence=IDA

GO:0051302 "regulation of cell division" evidence=IGI

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0000280 "nuclear division" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006275 "regulation of DNA replication" evidence=RCA

GO:0007000 "nucleolus organization" evidence=RCA

GO:0007067 "mitosis" evidence=RCA

GO:0007129 "synapsis" evidence=RCA

GO:0007131 "reciprocal meiotic recombination" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0010389 "regulation of G2/M transition of mitotic cell cycle" evidence=RCA

GO:0010564 "regulation of cell cycle process" evidence=RCA

GO:0016458 "gene silencing" evidence=RCA

GO:0016572 "histone phosphorylation" evidence=RCA

GO:0034968 "histone lysine methylation" evidence=RCA

GO:0042023 "DNA endoreduplication" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0051225 "spindle assembly" evidence=RCA

GO:0051258 "protein polymerization" evidence=RCA

TAIR|locus:2006737 MAP65-7 "AT1G14690" [Arabidopsis thaliana (taxid:3702)]

 Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
 Identities = 220/546 (40%), Positives = 323/546 (59%)

Query:     1 MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFS-----RGK 55
             ML+ELE++CL+IYRRKV+     KA LHQSL   EAEIA L++ALG   S S      G 
Sbjct:    42 MLMELEKECLEIYRRKVDEAANSKAQLHQSLVSIEAEIASLLAALGVFNSHSPMKAKEGS 101

Query:    56 GTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSV---DAQVD 112
              +LK++++A+R +LEDLR +K++R+K+F  I+ QI ++S EI+G    +N        +D
Sbjct:   102 KSLKEKLAAVRPMLEDLRLQKDERMKQFVDIKAQIEKMSGEISGYSDQLNKTMVGSLALD 161

Query:   113 ECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLS 172
             E DLT++KL E +THLR LQ EK+ RL KV + ++ +H L  VL ++F +TV+EVHPSL 
Sbjct:   162 EQDLTLRKLNEYQTHLRSLQKEKSDRLNKVLDYVNEVHTLCGVLGVDFGQTVSEVHPSLH 221

Query:   173 DSKNVQSKSISNDTIARLTGVIHXXXXXXXXXXXXXXXXGNALIKLWDLLETPVNEQRKV 232
              + + QS +IS+DT+  L  +IH                  +L +LW+L++T   E+ K 
Sbjct:   222 RTDHEQSTNISDDTLDGLHHMIHKLKTERSVRFQKLKDVAGSLFELWNLMDTSQEERTKF 281

Query:   233 DHVTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKG 292
               V+ +V SS  +++    L+ + IEQ+  EV+  N+ KAS+MKELV KR+ ELE + + 
Sbjct:   282 ASVSYVVRSSESDITEPNILSSETIEQVSAEVDCFNKLKASRMKELVMKRRTELENLCRL 341

Query:   293 VHMDVDSDAARQILISLIDSGNVXXXXXXXXXXXQIAKAKEEALSRKDILDKVEKWKHGA 352
              H++ D+  + +   +LIDSG V            I K KEEA SRK+I+D++++W    
Sbjct:   342 AHIEADTSTSLEKSTALIDSGLVDPSELLTNIELHINKIKEEAHSRKEIIDRIDRWLSAC 401

Query:   353 EEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIP 412
             EEE WL++Y +DE RYSAGRG H NLK AE+ARI ++K+PS+V+NLI K   WE E R  
Sbjct:   402 EEENWLEEYNQDETRYSAGRGGHVNLKHAERARITVNKIPSMVDNLIKKTLLWEDETRKS 461

Query:   413 FLYDKVPLLSILEEYTAXXXXXXXXXXXXXXXXXXXXXFAAEQEAIYGSRPSIKKP--LC 470
             FLYD V L+SILE+Y                           +E+IYGS+PS ++   + 
Sbjct:   462 FLYDGVRLVSILEDYKLTRKQQEEEKRRYRDQKKMQDLLIKRRESIYGSKPSPRRSNSVR 521

Query:   471 QSTSTNTMAGTP-VGRRFTTPSGRHVI-----SGGKERR----ESIRVTKPIPLNYVALP 520
             ++   N  A  P   RR +  +  + I     S    R+    + +R     PLN+VA+P
Sbjct:   522 KTNGYNGDASVPPTPRRNSAGATNNDIMTTPRSYSSHRQNGYFKEVRRLSTAPLNFVAIP 581

Query:   521 KDDSVS 526
             K+DSVS
Sbjct:   582 KEDSVS 587

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0007267 "cell-cell signaling" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010267 "production of ta-siRNAs involved in RNA interference" evidence=RCA

GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=RCA

GO:0048438 "floral whorl development" evidence=RCA

GO:0048439 "flower morphogenesis" evidence=RCA

TAIR|locus:2059713 ATMAP65-6 [Arabidopsis thaliana (taxid:3702)]

 Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
 Identities = 213/550 (38%), Positives = 318/550 (57%)

Query:     1 MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALG-----EHASFSRGK 55
             ML+ELE++CL IY+RKV+     KA LHQS+A  EAE+A L++ALG           +G 
Sbjct:    42 MLMELERECLQIYQRKVDEAANSKAKLHQSVASIEAEVASLMAALGVLNINSPIKLDKGS 101

Query:    56 GTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSIN---SVDAQVD 112
              +LK++++A+  ++E+LR +KE+R+K+FS I+ QI +IS EI+G    +N   ++   ++
Sbjct:   102 KSLKEKLAAVTPLVEELRIQKEERMKQFSDIKAQIEKISGEISGYSDHLNKAMNISLTLE 161

Query:   113 ECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLS 172
             E DLT++ L E +THLR LQ EK+ RL KV   ++ +H L  VL ++F +TV+ VHPSL 
Sbjct:   162 EQDLTLRNLNEYQTHLRTLQKEKSDRLNKVLGYVNEVHALCGVLGVDFSQTVSAVHPSLH 221

Query:   173 DSKNVQSKSISNDTIARLTGVIHXXXXXXXXXXXXXXXXGNALIKLWDLLETPVNEQRKV 232
              +   QS +IS+ T+  L  +I                   +L +LW+L++TP  ++ K 
Sbjct:   222 RTDQEQSTNISDSTLEGLEHMIQKLKTERKSRFQKLKDVVASLFELWNLMDTPQEDRTKF 281

Query:   233 DHVTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKG 292
               VT +V SS   ++  G L+ + IEQ+  EV+ L++ KAS+MKELV KR+ ELE++ + 
Sbjct:   282 GKVTYVVRSSEANITEPGILSTETIEQVSTEVDSLSKLKASRMKELVMKRRSELEDLCRL 341

Query:   293 VHMDVDSDAARQILISLIDSGNVXXXXXXXXXXXQIAKAKEEALSRKDILDKVEKWKHGA 352
              H+  D+  + +   +LIDSG V           QI K K+EA SRKDI+D++++W    
Sbjct:   342 THIQPDTSTSAEKSTALIDSGLVDPSELLANIEMQINKIKDEAQSRKDIMDRIDRWLSAC 401

Query:   353 EEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIP 412
             EEE WL++Y  DENRYSAGRG H NLKRAE+AR+ I+K+P +V+ LI K   WE + +  
Sbjct:   402 EEENWLEEYNLDENRYSAGRGGHVNLKRAERARVTINKIPGMVDTLIKKTLVWEEDMQKS 461

Query:   413 FLYDKVPLLSILEEYTAXXXXXXXXXXXXXXXXXXXXXFAAEQEAIYGSRPS------IK 466
             FLYD V L++ILE+Y                          ++E+IYGS+PS       +
Sbjct:   462 FLYDGVRLVNILEDYKLTRKQQEEEKKRYRDQKKRQDLLLTQRESIYGSKPSPRRSSSFR 521

Query:   467 KPLCQSTSTNTMAGTPVGRR----FTTPS---GRHVISGGKERR---ESIRVTKPIPLNY 516
             KP   + S    +  P  RR     TTP         SG   +    + +R     PLNY
Sbjct:   522 KPNGFNISNGNGSVPPTPRRGSVGTTTPDVLLTPRSYSGHHRQNGYFKEVRRLSTTPLNY 581

Query:   517 VALPKDDSVS 526
             VA+ K+D+VS
Sbjct:   582 VAMQKEDTVS 591

GO:0005634 "nucleus" evidence=ISM

GO:0009536 "plastid" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA;IDA

GO:0008017 "microtubule binding" evidence=IDA

GO:0031116 "positive regulation of microtubule polymerization" evidence=IDA

GO:0009524 "phragmoplast" evidence=IDA

GO:0009574 "preprophase band" evidence=IDA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

TAIR|locus:2153152 PLE "AT5G51600" [Arabidopsis thaliana (taxid:3702)]

 Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
 Identities = 197/498 (39%), Positives = 298/498 (59%)

Query:     1 MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGE---HASFS-RGKG 56
             MLLELE++CL++YRRKV++  + +A L Q++ADAEA++A + SA+GE   H   S +  G
Sbjct:    40 MLLELERECLEVYRRKVDQANRCRAQLRQAIADAEAQLAAICSAMGERPVHIRQSDQSVG 99

Query:    57 TLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDL 116
             +LKQ++  I   LE+++ +K +R  +F  +  QI  I+++I G G+ ++S +  +DE +L
Sbjct:   100 SLKQELGRILPELEEMQKRKVERRNQFIVVMEQIDSITNDIKGQGELVHS-EPLIDETNL 158

Query:   117 TVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKN 176
             +++KL EL   L+ LQ EK  R++ +  +L T++    VL ++F E V +V+P+LSD + 
Sbjct:   159 SMRKLEELHCQLQVLQKEKIDRVETIRKHLCTLYSHCSVLGMDFNEVVGQVNPTLSDPEG 218

Query:   177 VQSKSISNDTIARLTGVIHXXXXXXXXXXXXXXXXGNALIKLWDLLETPVNEQRKVDHVT 236
                +S+S+ TI +L   +                    +++LW+L++TP+ EQ++  H+T
Sbjct:   219 --PRSLSDHTIEKLGAAVQKLMEVKIQRMQRLQDLATTMLELWNLMDTPIEEQQEYQHIT 276

Query:   237 SLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMD 296
               +++S  E++    L+ D I+ +E EV  L+E KASKMKELV K++ ELEEI +  H+ 
Sbjct:   277 CNIAASEHEITEANSLSEDFIKYVEAEVVRLDEVKASKMKELVLKKRSELEEICRKTHLL 336

Query:   297 VDSDAARQILISLIDSGNVXXXXXXXXXXXQIAKAKEEALSRKDILDKVEKWKHGAEEEQ 356
               SD+A    I  I+SG V            I+K KEEALSRK+IL++VEKW    +EE 
Sbjct:   337 PVSDSAIDQTIVAIESGIVDATMVLEHLEQHISKIKEEALSRKEILERVEKWLSACDEES 396

Query:   357 WLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEKRIPFLYD 416
             WL++Y +D+NRY+AGRGAH  LKRAEKAR L++KLP +VE L +K   WE E  I FLYD
Sbjct:   397 WLEEYNRDDNRYNAGRGAHLTLKRAEKARNLVTKLPGMVEALASKTIVWEQENGIEFLYD 456

Query:   417 KVPLLSILEEYTAXXXXXXXXXXXXXXXXXXXXXFAAEQEAIYGSRPSIKKPLCQSTSTN 476
              + LLS+LEEY                         AEQEA+YGS+PS  KPL    +  
Sbjct:   457 GIRLLSMLEEYNILRQEREEEHRRQRDQKKLQGQLIAEQEALYGSKPSPSKPLGGKKAPR 516

Query:   477 TMAGTPVGRRFTTPSGRH 494
                G    RR +  +  H
Sbjct:   517 MSTGGASNRRLSLGAAMH 534

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA;IMP

GO:0005874 "microtubule" evidence=IDA

GO:0009524 "phragmoplast" evidence=IDA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA;IMP

GO:0000280 "nuclear division" evidence=RCA;IMP

GO:0009624 "response to nematode" evidence=RCA;IMP

GO:0052096 "formation by symbiont of syncytium involving giant cell for nutrient acquisition from host" evidence=IMP

GO:0008017 "microtubule binding" evidence=IDA

GO:0009574 "preprophase band" evidence=IDA

GO:0046785 "microtubule polymerization" evidence=IDA

GO:0055028 "cortical microtubule" evidence=IDA

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0006275 "regulation of DNA replication" evidence=RCA

GO:0006342 "chromatin silencing" evidence=RCA

GO:0007000 "nucleolus organization" evidence=RCA

GO:0007067 "mitosis" evidence=RCA

GO:0007129 "synapsis" evidence=RCA

GO:0007131 "reciprocal meiotic recombination" evidence=RCA

GO:0008283 "cell proliferation" evidence=RCA

GO:0010389 "regulation of G2/M transition of mitotic cell cycle" evidence=RCA

GO:0010564 "regulation of cell cycle process" evidence=RCA

GO:0016572 "histone phosphorylation" evidence=RCA

GO:0042023 "DNA endoreduplication" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0051225 "spindle assembly" evidence=RCA

GO:0051258 "protein polymerization" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2167978 MAP65-9 "microtubule-associated protein 65-9" [Arabidopsis thaliana (taxid:3702)]

 Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
 Identities = 183/517 (35%), Positives = 292/517 (56%)

Query:     1 MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSA------LGEHASFSR- 53
             +L+E+E++C ++Y RK+E+ ++ K  + Q +AD+EA +  + S       LG H    + 
Sbjct:    34 ILIEIEEECREVYNRKIEKVKEEKIRIKQEIADSEARVIDICSVMEEPPILGRHHQSDQQ 93

Query:    54 -GKG-TLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSIN-SVDAQ 110
              G G +LK ++  I   LE++  +K +R  +F  +   I  +  EI G       S D  
Sbjct:    94 SGNGRSLKDELVKILQKLEEMEKRKSERKIQFIQVIDDIRCVREEINGESDDETCSSDFS 153

Query:   111 VDECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPS 170
              DE DL+++KL EL   L  LQ +K  R++++ +N+ T+  L  VL +NF ETV ++HPS
Sbjct:   154 ADESDLSLRKLEELHRELYTLQEQKRNRVKQIQDNIRTLESLCSVLGLNFRETVTKIHPS 213

Query:   171 LSDSKNVQSKSISNDTIARLTGVIHXXXXXXXXXXXXXXXXGNALIKLWDLLETPVNEQR 230
             L D++   S+SISN+T+ +L   +                    +++ W+L++TP  EQ+
Sbjct:   214 LVDTEG--SRSISNETLDKLASSVQQWHETKIQRMQELQDLVTTMLEFWNLMDTPAEEQQ 271

Query:   231 KVDHVTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIY 290
             K   V+  ++++V E++    L++D++E+++ E+  L E K SKMKELV K++ ELEEI 
Sbjct:   272 KFMDVSCNIAATVSEITKPNSLSIDLLEEVKAELCRLEELKWSKMKELVLKKRSELEEIC 331

Query:   291 KGVHMDVDS-DAARQILISLIDSGNVXXXXXXXXXXXQIAKAKEEALSRKDILDKVEKWK 349
             +  H+ ++  D A + +I  I+SG+V           +  K KEEALSRK+IL+K +KW 
Sbjct:   332 RRTHIVLEEEDIAVENVIKAIESGDVNPENILEQIEYRAGKVKEEALSRKEILEKADKWL 391

Query:   350 HGAEEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAEK 409
             +  EEE WL++Y +DENRY+AG+G+H  LKRAEKAR L++KLP++VE L +K+  WE+EK
Sbjct:   392 NACEEENWLEEYNQDENRYNAGKGSHLILKRAEKARALVNKLPAMVEALASKITIWESEK 451

Query:   410 RIPFLYDKVPLLSILEEYTAXXXXXXXXXXXXXXXXXXXXXFAAEQEAIYGSRP-SIKKP 468
                FL+D   LLS+LEEYT                        +EQ+    ++P S KK 
Sbjct:   452 EYEFLFDGNRLLSMLEEYTELREEKEQERRRKRDLKKHQGQVTSEQDKGSVTKPQSAKKG 511

Query:   469 LCQSTSTNTMAG--TPV---------GRRFTTPSGRH 494
             L  ST+   ++   TP           + F+TP  RH
Sbjct:   512 LKVSTNKRFVSSPHTPQTDSPHSAKSNQSFSTPLSRH 548

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005874 "microtubule" evidence=IDA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

UNIPROTKB|F8W9B5 PRC1 "Protein regulator of cytokinesis 1" [Homo sapiens (taxid:9606)]

 Score = 110 (43.8 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
 Identities = 44/177 (24%), Positives = 76/177 (42%)

Query:   256 VIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNV 315
             V + +++EV+ L E K   MK+++   + EL + +        S   RQ           
Sbjct:   271 VRKALQLEVDRLEELKMQNMKKVIEAIRVELVQYWDQCFY---SQEQRQAFAPFCAED-- 325

Query:   316 XXXXXXXXXXXQIAKAKEEALSRKDILDKVEKWKHGAEEEQW--LDDYEK---DENRYSA 370
                        +I + K      K++ + V+KW     EE W    ++E+   D NR++ 
Sbjct:   326 YTESLLQLHDAEIVRLKNYYEVHKELFEGVQKW-----EETWRLFLEFERKASDPNRFT- 379

Query:   371 GRGAHKNLKRAEKARILISK-LPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEE 426
              RG   NL + EK R  + K LP + E L A+++ WE E    F+ +    +  + E
Sbjct:   380 NRGG--NLLKEEKQRAKLQKMLPKLEEELKARIELWEQEHSKAFMVNGQKFMEYVAE 434

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA

GO:0000910 "cytokinesis" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

UNIPROTKB|H9KV59 PRC1 "Protein regulator of cytokinesis 1" [Homo sapiens (taxid:9606)]

 Score = 110 (43.8 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
 Identities = 44/177 (24%), Positives = 76/177 (42%)

Query:   256 VIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNV 315
             V + +++EV+ L E K   MK+++   + EL + +        S   RQ           
Sbjct:   271 VRKALQLEVDRLEELKMQNMKKVIEAIRVELVQYWDQCFY---SQEQRQAFAPFCAED-- 325

Query:   316 XXXXXXXXXXXQIAKAKEEALSRKDILDKVEKWKHGAEEEQW--LDDYEK---DENRYSA 370
                        +I + K      K++ + V+KW     EE W    ++E+   D NR++ 
Sbjct:   326 YTESLLQLHDAEIVRLKNYYEVHKELFEGVQKW-----EETWRLFLEFERKASDPNRFT- 379

Query:   371 GRGAHKNLKRAEKARILISK-LPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEE 426
              RG   NL + EK R  + K LP + E L A+++ WE E    F+ +    +  + E
Sbjct:   380 NRGG--NLLKEEKQRAKLQKMLPKLEEELKARIELWEQEHSKAFMVNGQKFMEYVAE 434

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA

GO:0000910 "cytokinesis" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

UNIPROTKB|O43663 PRC1 "Protein regulator of cytokinesis 1" [Homo sapiens (taxid:9606)]

 Score = 110 (43.8 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
 Identities = 44/177 (24%), Positives = 76/177 (42%)

Query:   256 VIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNV 315
             V + +++EV+ L E K   MK+++   + EL + +        S   RQ           
Sbjct:   271 VRKALQLEVDRLEELKMQNMKKVIEAIRVELVQYWDQCFY---SQEQRQAFAPFCAED-- 325

Query:   316 XXXXXXXXXXXQIAKAKEEALSRKDILDKVEKWKHGAEEEQW--LDDYEK---DENRYSA 370
                        +I + K      K++ + V+KW     EE W    ++E+   D NR++ 
Sbjct:   326 YTESLLQLHDAEIVRLKNYYEVHKELFEGVQKW-----EETWRLFLEFERKASDPNRFT- 379

Query:   371 GRGAHKNLKRAEKARILISK-LPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEE 426
              RG   NL + EK R  + K LP + E L A+++ WE E    F+ +    +  + E
Sbjct:   380 NRGG--NLLKEEKQRAKLQKMLPKLEEELKARIELWEQEHSKAFMVNGQKFMEYVAE 434

GO:0008017 "microtubule binding" evidence=IEA

GO:0000922 "spindle pole" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005819 "spindle" evidence=IDA

GO:0000910 "cytokinesis" evidence=IDA

GO:0019901 "protein kinase binding" evidence=IPI

GO:0000022 "mitotic spindle elongation" evidence=TAS

GO:0005876 "spindle microtubule" evidence=TAS

GO:0042802 "identical protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

UNIPROTKB|F1MRT3 PRC1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 103 (41.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
 Identities = 44/185 (23%), Positives = 80/185 (43%)

Query:   248 MLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILI 307
             M G  A  V + +++EV+ L E K   MK+++   + E+ + +        S   RQ   
Sbjct:   264 MTGSKA-KVRKALQLEVDRLEELKMQNMKKVIEAIRVEVAQYWDRCFY---SQEQRQAFA 319

Query:   308 SLIDSGNVXXXXXXXXXXXQIAKAKEEALSRKDILDKVEKWKHGAEEEQW--LDDYEK-- 363
             +                  +I + +      K++ + V+KW     EE W    ++E+  
Sbjct:   320 AYYSED--YTENLLQLHDAEIVRLRNYYEVHKELFEGVQKW-----EESWRLFLEFERKA 372

Query:   364 -DENRYSAGRGAHKNLKRAEKARILISK-LPSVVENLIAKVKAWEAEKRIPFLYDKVPLL 421
              D +R++  RG   NL + EK R  + K LP + E L A+++ WE E    F+ +    +
Sbjct:   373 SDPSRFT-NRGG--NLLKEEKQRAKLQKTLPKLEEELKARIEMWEREHSKAFVVNGQKFM 429

Query:   422 SILEE 426
               + E
Sbjct:   430 EYVTE 434

GO:0042802 "identical protein binding" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000910 "cytokinesis" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA

MGI|MGI:1858961 Prc1 "protein regulator of cytokinesis 1" [Mus musculus (taxid:10090)]

 Score = 108 (43.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
 Identities = 56/254 (22%), Positives = 90/254 (35%)

Query:   260 MEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNVXXXX 319
             +++EV+ L E K   +K+++ K + EL + +        S   RQ               
Sbjct:   275 LKLEVDRLEELKMQNIKQVIEKIRVELAQFWDQCFY---SQEQRQAFAPYYSED--YTEN 329

Query:   320 XXXXXXXQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDDYEKDENRYSAGRGAHK--N 377
                    +I + +      K++   V+KW     EE W    E +      GR  ++  N
Sbjct:   330 LLHLHDAEIVRLRNYYDVHKELFQGVQKW-----EESWKLFLEFERKASDPGRFTNRGGN 384

Query:   378 LKRAEKARILISK-LPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEEYTAXXXXXXX 436
             L + EK R  + K LP + E L A+++ WE E    F+ +       +E  T        
Sbjct:   385 LLKEEKERAKLQKTLPKLEEELKARIEQWEQEHSTAFVVNGQ---KFMEYVTEQWELHRL 441

Query:   437 XXXXXXXXXXXXXXFAAEQEAIYGSRPSI--KKPLCQSTSTNTMAGTPVGRRFTTPSGRH 494
                              E E +YGS P    K+P      +  M  T +       S R 
Sbjct:   442 EKERAKQERQLKNKKQTEAEMLYGSTPRTPSKRPGQTPKKSGKMNTTTMSSATPNSSIRP 501

Query:   495 VISGGKERRESIRV 508
             V  G   R    R+
Sbjct:   502 VFGGSVYRSPMSRL 515

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA

GO:0000910 "cytokinesis" evidence=ISO

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005819 "spindle" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0019901 "protein kinase binding" evidence=ISO

GO:0042802 "identical protein binding" evidence=ISO

GO:0051301 "cell division" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZVJ3	MA655_ARATH	No assigned EC number	0.5889	0.9829	0.9418	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	527
pfam03999	619	pfam03999, MAP65_ASE1, Microtubule associated prot	8e-45

>gnl|CDD|217835 pfam03999, MAP65_ASE1, Microtubule associated protein (MAP65/ASE1 family)

 Score =  166 bits (422), Expect = 8e-45
 Identities = 126/486 (25%), Positives = 212/486 (43%), Gaps = 46/486 (9%)

Query: 1   MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSR------- 53
            L +++       +   E +   K  + + +A   AEI  L +  G     S        
Sbjct: 5   NLADIKIHYSSFEKDLKEESSTKKQAILKDIAVLRAEIKRLSAENGIEQDISNSLLHKEP 64

Query: 54  ----GKGTLKQQISAIRSI---------LEDLRSKKEQRIKEFSGIQFQIAQISSEIAGN 100
                +  + Q+  +             LE LR +K +R  E   +  Q+ Q+ +E+   
Sbjct: 65  LQLLSEKDILQRPKSFPLGVWLLKLRDQLESLRKQKAERRAEIKELLHQLLQLCNELGEP 124

Query: 101 GQSINSVDAQVDECDL-TVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSIN 159
             S+   DA  D   L  +++L   +  L EL+ EK  RL++V++   +I  L  +L   
Sbjct: 125 PLSLLRKDA--DPLSLPNLEELEHFRERLGELREEKVRRLEEVDSLKQSIKSLCSLLGTP 182

Query: 160 FLETVNEVHPSLSDSKNVQSKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLW 219
              T  E    LS  +      ++ +TI +L  ++  L  +K+QR  K+  L   + +LW
Sbjct: 183 PARTDFE-QDVLSYGEIPNDHCVTRETIDKLDKMLENLAAQKKQRADKIDDLREQIQELW 241

Query: 220 DLLETPVNEQ-RKVDHVTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKEL 278
           + L+    EQ R V   T L   S+  +              E EVE L   K   +K+ 
Sbjct: 242 NRLQISDEEQKRFVREATILSQESIKRL--------------EEEVERLEALKKQNLKKF 287

Query: 279 VFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSR 338
           +   + E++E++  +    +    +       +        LL   +++I + KEE  S 
Sbjct: 288 IEDLRIEIQELWDLLFYSEEQ--RKSFTPYYEELYT---EQLLEQHENEIKRLKEEYSSN 342

Query: 339 KDILDKVEKWKHGAEEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENL 398
           K+IL+ +EKW+   E  + L+    D NR++  RG H  LK  ++ + L  KLP V E L
Sbjct: 343 KEILELIEKWESLWERMEELEAKANDPNRFN-NRGGHL-LKEEKERKRLTRKLPKVEEQL 400

Query: 399 IAKVKAWEAEKRIPFLYDKVPLLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAI 458
            AKV AWE E   PFL   VPLL  + +  AQ ++  +EK+R + +K+L  + +   E  
Sbjct: 401 TAKVTAWEGEFGTPFLVHGVPLLERMAQIEAQWERHRQEKQRAKARKKLANKTSTVMEPP 460

Query: 459 YGSRPS 464
           YGS  S
Sbjct: 461 YGSTES 466

Length = 619

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	527
KOG4302	660	consensus Microtubule-associated protein essential	100.0
PF03999	619	MAP65_ASE1: Microtubule associated protein (MAP65/	100.0
KOG4302	660	consensus Microtubule-associated protein essential	99.91
PF03999	619	MAP65_ASE1: Microtubule associated protein (MAP65/	99.9
PF12128	1201	DUF3584: Protein of unknown function (DUF3584); In	95.07
KOG0996	1293	consensus Structural maintenance of chromosome pro	94.51
TIGR03185	650	DNA_S_dndD DNA sulfur modification protein DndD. T	93.46
TIGR00606	1311	rad50 rad50. This family is based on the phylogeno	91.35
PF15070	617	GOLGA2L5: Putative golgin subfamily A member 2-lik	90.32
PRK04778	569	septation ring formation regulator EzrA; Provision	89.55
KOG0161	1930	consensus Myosin class II heavy chain [Cytoskeleto	89.27
PF10146	230	zf-C4H2: Zinc finger-containing protein ; InterPro	88.62
PRK11637	428	AmiB activator; Provisional	87.06
TIGR03185	650	DNA_S_dndD DNA sulfur modification protein DndD. T	86.91
PF08317	325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	86.82
KOG0933	1174	consensus Structural maintenance of chromosome pro	85.79
PRK02224	880	chromosome segregation protein; Provisional	85.79
KOG1029	1118	consensus Endocytic adaptor protein intersectin [S	85.31
TIGR02169	1164	SMC_prok_A chromosome segregation protein SMC, pri	85.07
PRK03918	880	chromosome segregation protein; Provisional	83.46
PHA02562	562	46 endonuclease subunit; Provisional	80.75
PF12128	1201	DUF3584: Protein of unknown function (DUF3584); In	80.69

>KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]

Probab=100.00  E-value=4.9e-103  Score=845.25  Aligned_cols=517  Identities=46%  Similarity=0.679  Sum_probs=469.4

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHH
Q 009740            1 MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSR----GKGTLKQQISAIRSILEDLRSKK   76 (527)
Q Consensus         1 ~~~~le~ecl~vyr~kV~~~~~~k~~l~q~ia~~~~El~~L~~eLge~~~~~~----~~~tL~eql~~l~~~le~Lrk~K   76 (527)
                      ||++||++|+++|+++|+++...+++|+++|+.++++++.||++||+++....    +++||++++..|.+.++.|+++|
T Consensus        40 ~l~~le~e~~~~y~~kve~a~~~~~~L~~~ia~~eael~~l~s~l~~~~~~~~~~~k~e~tLke~l~~l~~~le~lr~qk  119 (660)
T KOG4302|consen   40 KLLRLEQECLEIYKRKVEEASESKARLLQEIAVIEAELNDLCSALGEPSIIGEISDKIEGTLKEQLESLKPYLEGLRKQK  119 (660)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccccCccHHHHHHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999987643    66999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009740           77 EQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVL  156 (527)
Q Consensus        77 ~eR~~ef~~l~~qi~~L~~eL~~~~~~~~~~~~~~d~~dlS~~~L~~L~~~L~~Lq~Ek~~R~~kv~el~~~I~~L~~~L  156 (527)
                      ++|+++|.+++.||+.||.+||+....  .....+|+.|+|+++|++|+.+|.+|++||..|+++|.+++.+|+.||.+|
T Consensus       120 ~eR~~ef~el~~qie~l~~~l~g~~~~--~~~~~~D~~dlsl~kLeelr~~L~~L~~ek~~Rlekv~~~~~~I~~l~~~L  197 (660)
T KOG4302|consen  120 DERRAEFKELYHQIEKLCEELGGPEDL--PSFLIADESDLSLEKLEELREHLNELQKEKSDRLEKVLELKEEIKSLCSVL  197 (660)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCccC--CcccccCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999998211  113456889999999999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccCCCCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHhHHHhh
Q 009740          157 SINFLETVNEVHPSLSDSKNVQSKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVT  236 (527)
Q Consensus       157 g~d~~~~~~~v~psl~d~~~~~~~~lS~~~L~~L~~~l~~L~~~K~~R~~ki~~l~~~l~~LW~~L~~p~eEr~~F~~~~  236 (527)
                      |++|..+++++||+|.+..+.++++||++||++|..++..|+++|.+|++++++|+.+|.+|||+|++|++||..|.+++
T Consensus       198 g~~~~~~vt~~~~sL~~~~~~~~~~is~etl~~L~~~v~~l~~~k~qr~~kl~~l~~~~~~LWn~l~ts~Ee~~~f~~~t  277 (660)
T KOG4302|consen  198 GLDFSMTVTDVEPSLVDHDGEQSRSISDETLDRLDKMVKKLKEEKKQRLQKLQDLRTKLLELWNLLDTSDEERQRFVHVT  277 (660)
T ss_pred             CCCcccchhhhhhhhhhccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHcccc
Confidence            99999999999999999888788999999999999999999999999999999999999999999999999999999986


Q ss_pred             hccccccchhcccCCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHhhhhhccCCCCC
Q 009740          237 SLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNVD  316 (527)
Q Consensus       237 ~~i~~s~~e~~~~~~LS~~~I~~~e~Ev~RLe~lK~~~mk~li~k~r~eLeelWd~~~~~~e~~~~~~~~~~~~~s~~~~  316 (527)
                            ++|+|.+++||.++|..++.||.||++||+++||+||+++|.||++||+.+||+.+..........++++|.+|
T Consensus       278 ------~~e~t~~~~ls~d~I~~ve~Ev~Rl~qlK~s~mKeli~k~r~Eleel~~~~h~s~~~e~~~~f~~~~~ds~~~d  351 (660)
T KOG4302|consen  278 ------ESEATEPNSLSLDIIEQVEKEVDRLEQLKASNMKELIEKKRSELEELWRLLHYSEENESRRRFITYLIDSGTED  351 (660)
T ss_pred             ------HHHhhccccccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhccCC
Confidence                  89999999999999999999999999999999999999999999999999999995333344566778899999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhHHHHHHHHhcCCccccccCCCChhhhHHHHHHHHHhccchHHHH
Q 009740          317 LSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVE  396 (527)
Q Consensus       317 ~e~lL~~~E~eI~~lke~~~~~k~Il~~vekw~~l~~e~~~Le~~~~D~~R~~~~RG~h~~LlreEK~Rk~v~KlP~l~~  396 (527)
                      +.++|+.++.+|.++|+++.+||+|+++|++|+++|+++.||++|++|.|||+++||||++|+||||+|++|+|||+|++
T Consensus       352 ~~ell~~~d~~i~k~keea~srk~il~~ve~W~sa~EeE~~lee~n~D~nR~~~~Rg~h~lLkreekar~~vsKlP~~~~  431 (660)
T KOG4302|consen  352 VLELLENIDNLIKKYKEEALSRKEILERVEKWESACEEESWLEEYNRDSNRYNAGRGAHLLLKREEKARKLVSKLPKMVE  431 (660)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccchhhhHhccccchhHHHHHHHHHHHhhhCchhhH
Confidence            99999999999999999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCceEECCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCC----
Q 009740          397 NLIAKVKAWEAEKRIPFLYDKVPLLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGSRPSIKKPLCQS----  472 (527)
Q Consensus       397 ~L~~~l~~wE~e~g~~Fl~dG~~ll~~lee~~~~~~eKe~ek~~~r~~kk~~~q~~~e~e~~~gs~p~~~~~~~~~----  472 (527)
                      .|+.++.+||.++|+||+|||+||++|+++|..||++||++|+|+|++||.++|+.++++..|||+|||++|.+.+    
T Consensus       432 ~L~~k~~~wE~e~~~~FL~~g~~ll~m~~e~~~~r~~ke~~k~r~rd~kk~s~q~~~~~~~~~~sk~sp~~p~s~rk~~~  511 (660)
T KOG4302|consen  432 ALTAKVTAWEEEKGRPFLVDGVPLLEMLEEYEEHRQEKEQEKARQRDQKKTSGQLKPEQEGRYGSKPSPSKPNSPRKNRG  511 (660)
T ss_pred             HHHHHHHHHHHhcCCceeecCccHHHHHHHHHHHHHHHHHHHHhcccccccccccCccccccccCCCCCCCCCccccCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999987732    


Q ss_pred             CCCC---CCCCCCcCCcccCCCCCc--ccCCCcccccccccCCCCCcccccCCCCCCC
Q 009740          473 TSTN---TMAGTPVGRRFTTPSGRH--VISGGKERRESIRVTKPIPLNYVALPKDDSV  525 (527)
Q Consensus       473 ~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  525 (527)
                      .+++   ..+++|+.|+++.++..+  .....+......+..+++|.|||+..+.++.
T Consensus       512 ~~t~~~~~~~~~ps~~~~s~~~~~~s~~~~~~~~s~r~~~~~st~p~n~~~~~~~~~l  569 (660)
T KOG4302|consen  512 RSTPPNGSLSKTPSKRPLSGGNSAASTQNRTTPLSPRRLRASSTTPANKVARQKIESL  569 (660)
T ss_pred             CCCCCCCCCCCCCccCcCCCCCCCCCcccCCCCCCcccccCCCCCCchhhhccccccc
Confidence            2222   145677777776543211  1111111112335567889999999988764

>PF03999 MAP65_ASE1: Microtubule associated protein (MAP65/ASE1 family); InterPro: IPR007145 This is a family of microtubule associated proteins

Probab=100.00  E-value=3.9e-81  Score=694.44  Aligned_cols=441  Identities=38%  Similarity=0.546  Sum_probs=108.2

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----------CCCCC---------CCCCCHHH
Q 009740            1 MLLELEQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGE-----------HASFS---------RGKGTLKQ   60 (527)
Q Consensus         1 ~~~~le~ecl~vyr~kV~~~~~~k~~l~q~ia~~~~El~~L~~eLge-----------~~~~~---------~~~~tL~e   60 (527)
                      ||+++|++|+++|+++|++++..++.|++.|+.+.+|++.|++++|.           .++..         ..++||++
T Consensus         5 ~~~~~~~~~~~~~~~~~ee~~~~~~~l~~~i~~~~~E~~~L~~~lg~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~L~~   84 (619)
T PF03999_consen    5 MVVYLEIECLNVYMIKVEEANELKARLLQSIADAEAELADLSSELGEEQEHLCRELEKEPLSLEEEKDILQLEKSMPLKE   84 (619)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHhcccccccccccchhhhcccccchh
Confidence            78999999999999999999999999999999999999999544443           22211         23378999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCccccccCCCCCc-HHHHHHHHHHHHHHHHHHHHHH
Q 009740           61 QISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLT-VKKLGELKTHLRELQNEKNLRL  139 (527)
Q Consensus        61 ql~~l~~~le~Lrk~K~eR~~ef~~l~~qi~~L~~eL~~~~~~~~~~~~~~d~~dlS-~~~L~~L~~~L~~Lq~Ek~~R~  139 (527)
                      ++..|.+.++.|++++.+|+++|..++.+++.||++||..+....  ...++..+++ .++|+.|+.+|+.|++||+.|+
T Consensus        85 ~~~~L~~~le~l~~~~~eR~~~~~~L~~~~~~l~~~Lg~~~~~~~--~~~~~~~~l~S~~~l~~l~~~l~~L~~e~~~R~  162 (619)
T PF03999_consen   85 QLPKLRPQLEELRKEKEERMQEFKELQEQLEQLCEELGELPLCLN--PFDIDESDLPSLEELEELRQHLQRLQEEKERRL  162 (619)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCc--cccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999987665332  1234555655 8999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCChh-hhhhcccCCCCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009740          140 QKVNNNLSTIHELSLVLSINFL-ETVNEVHPSLSDSKNVQSKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKL  218 (527)
Q Consensus       140 ~kv~el~~~I~~L~~~Lg~d~~-~~~~~v~psl~d~~~~~~~~lS~~~L~~L~~~l~~L~~~K~~R~~ki~~l~~~l~~L  218 (527)
                      ++|.+++..|+.||.+||+++. ........++.  .++.+++||+++|++|...++.|+++|.+|..++++|+.+|..|
T Consensus       163 ~~v~~l~~~I~~l~~~L~~~~~~~~~e~~l~~~~--~~~~~~~Ls~~~l~~L~~~~~~L~~~k~~r~~~~~~l~~~i~~L  240 (619)
T PF03999_consen  163 EEVRELREEIISLMEELGIDPERTSFEKDLLSYS--EDEESFCLSDENLEKLQELLQELEEEKEEREEKLQELREKIEEL  240 (619)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHhCCCcccccchhhccccc--cccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999997 44332222222  24568999999999999999999999999999999999999999


Q ss_pred             HHHcCCCHHHHHhHHHhhhccccccchhcccCCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCChh
Q 009740          219 WDLLETPVNEQRKVDHVTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVD  298 (527)
Q Consensus       219 W~~L~~p~eEr~~F~~~~~~i~~s~~e~~~~~~LS~~~I~~~e~Ev~RLe~lK~~~mk~li~k~r~eLeelWd~~~~~~e  298 (527)
                      |++|++|.+||+.|...             ++++|.++|+++++||+||+++|+++|++||.++|.+|++|||+|||+++
T Consensus       241 W~~L~~~~ee~~~F~~~-------------~~~ls~~~i~~l~~El~RL~~lK~~~lk~~I~~~R~ei~elWd~~~~s~e  307 (619)
T PF03999_consen  241 WNRLDVPEEEREAFLEE-------------NSGLSLDTIEALEEELERLEELKKQNLKEFIEKKRQEIEELWDKCHYSEE  307 (619)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHhCCCHHHHHHHhhc-------------cCcchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCHH
Confidence            99999999999999665             57889999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhHHHHHHHHhcCCccccccCCCChhhh
Q 009740          299 SDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDDYEKDENRYSAGRGAHKNL  378 (527)
Q Consensus       299 ~~~~~~~~~~~~~s~~~~~e~lL~~~E~eI~~lke~~~~~k~Il~~vekw~~l~~e~~~Le~~~~D~~R~~~~RG~h~~L  378 (527)
                      +|.+   |.+++++  .++++||+.||.||++|+++|.++++||++|++|.++|+++.|||+|++|||||+ |||||  |
T Consensus       308 er~~---F~~~~~d--~~~E~lL~~hE~Ei~~Lk~~~~~~k~Il~~v~k~~~l~~~~~~Le~~~~D~~Rl~-~RGg~--L  379 (619)
T PF03999_consen  308 ERQA---FTPFYID--SYTEELLELHEEEIERLKEEYESRKPILELVEKWESLWEEMEELEESSKDPSRLN-NRGGH--L  379 (619)
T ss_dssp             --------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCGG---------H
T ss_pred             HHHH---HHHHhcc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhc-ccccH--H
Confidence            8865   5554543  3779999999999999999999999999999999999999999999999999999 99995  8


Q ss_pred             HHHHHHHHHhcc-chHHHHHHHHHHHHHHHHcCCceEECCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhh
Q 009740          379 KRAEKARILISK-LPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEEYTAQCQKREEEKRRCREQKRLQEQFAAEQEA  457 (527)
Q Consensus       379 lreEK~Rk~v~K-lP~l~~~L~~~l~~wE~e~g~~Fl~dG~~ll~~lee~~~~~~eKe~ek~~~r~~kk~~~q~~~e~e~  457 (527)
                      |+|||+|++|+| ||+|++.|+.+|.+||.++|+||+|||++|+++|++|......++.+|.+.+.+|+.+.+..+++++
T Consensus       380 LkEEk~rk~i~k~lPkle~~L~~~l~~wE~e~g~pFlv~G~~~le~l~e~~~~~~~~~~~k~~~~~~k~~~~~~~~~~~~  459 (619)
T PF03999_consen  380 LKEEKERKRIQKKLPKLEEELKKKLEEWEEEHGKPFLVDGERYLEYLEEYEEQWERKREEKERSKQQKKLQNQKQTEQEM  459 (619)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--EETTEEHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEcCccHHHHHHHHHHHHHhhhhhhccccccCCCCCCCccccCC
Confidence            999999999998 9999999999999999999999999999999999877666667777777778888888888899999


Q ss_pred             ccCCCCCCC
Q 009740          458 IYGSRPSIK  466 (527)
Q Consensus       458 ~~gs~p~~~  466 (527)
                      .|||+|+|.
T Consensus       460 ~~~s~~s~~  468 (619)
T PF03999_consen  460 PYGSKPSPA  468 (619)
T ss_dssp             HC-------
T ss_pred             CCCCccccC
Confidence            999987653

One of its members is the yeast anaphase spindle elongation protein.; PDB: 3NRX_A 3NRY_A.

>KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]

Probab=99.91  E-value=5e-20  Score=200.75  Aligned_cols=355  Identities=16%  Similarity=0.214  Sum_probs=268.1

Q ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCC-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q 009740           30 SLADAEAEIACLVSALGEHASFSRGK-GTLK-QQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSV  107 (527)
Q Consensus        30 ~ia~~~~El~~L~~eLge~~~~~~~~-~tL~-eql~~l~~~le~Lrk~K~eR~~ef~~l~~qi~~L~~eL~~~~~~~~~~  107 (527)
                      .......+|+.||+++|++....+.- .-|. +++..|...+++....+..-.+++...++++..||..|+..+..+.  
T Consensus        15 t~~~~~~eL~~IW~~igE~~~e~d~~l~~le~e~~~~y~~kve~a~~~~~~L~~~ia~~eael~~l~s~l~~~~~~~~--   92 (660)
T KOG4302|consen   15 TCGNLLNELQKIWDEIGESETERDKKLLRLEQECLEIYKRKVEEASESKARLLQEIAVIEAELNDLCSALGEPSIIGE--   92 (660)
T ss_pred             HHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccc--
Confidence            33445556999999999987643211 2222 5678899999999999999999999999999999999999887543  


Q ss_pred             ccccC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhcccCCCCCCccccCCCCCHHH
Q 009740          108 DAQVD-ECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQSKSISNDT  186 (527)
Q Consensus       108 ~~~~d-~~dlS~~~L~~L~~~L~~Lq~Ek~~R~~kv~el~~~I~~L~~~Lg~d~~~~~~~v~psl~d~~~~~~~~lS~~~  186 (527)
                        ..+ ....-.+.|..+...+..|.+.|++|...|.++...|..||..||.++.  .  .++     ...+..+||+..
T Consensus        93 --~~~k~e~tLke~l~~l~~~le~lr~qk~eR~~ef~el~~qie~l~~~l~g~~~--~--~~~-----~~~D~~dlsl~k  161 (660)
T KOG4302|consen   93 --ISDKIEGTLKEQLESLKPYLEGLRKQKDERRAEFKELYHQIEKLCEELGGPED--L--PSF-----LIADESDLSLEK  161 (660)
T ss_pred             --cccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--C--Ccc-----cccCcccccHHH
Confidence              112 2234568999999999999999999999999999999999999998821  1  111     123467899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHhHHHhhhccccccchhcc--cCCChHHHHHHHHHHH
Q 009740          187 IARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSSSVDEVSM--LGCLALDVIEQMEVEV  264 (527)
Q Consensus       187 L~~L~~~l~~L~~~K~~R~~ki~~l~~~l~~LW~~L~~p~eEr~~F~~~~~~i~~s~~e~~~--~~~LS~~~I~~~e~Ev  264 (527)
                      |+.|+..+..|+++|..|++++..+...|..||..||++      |..+...+++|..+-+.  +.++|.++|+.+..-|
T Consensus       162 Leelr~~L~~L~~ek~~Rlekv~~~~~~I~~l~~~Lg~~------~~~~vt~~~~sL~~~~~~~~~~is~etl~~L~~~v  235 (660)
T KOG4302|consen  162 LEELREHLNELQKEKSDRLEKVLELKEEIKSLCSVLGLD------FSMTVTDVEPSLVDHDGEQSRSISDETLDRLDKMV  235 (660)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC------cccchhhhhhhhhhccCcccccCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999      55555566777766664  6889999999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHhhh--hhccCCCCChHHHHHHHHHHHHHHHHHHHhhhHHH
Q 009740          265 EHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILI--SLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDIL  342 (527)
Q Consensus       265 ~RLe~lK~~~mk~li~k~r~eLeelWd~~~~~~e~~~~~~~~~--~~~~s~~~~~e~lL~~~E~eI~~lke~~~~~k~Il  342 (527)
                      +.|...|.+++..+ ...+..+.+||+.|.+|++++..|.+..  .+...| .-+.+++...+.|+.+|.+...++  |=
T Consensus       236 ~~l~~~k~qr~~kl-~~l~~~~~~LWn~l~ts~Ee~~~f~~~t~~e~t~~~-~ls~d~I~~ve~Ev~Rl~qlK~s~--mK  311 (660)
T KOG4302|consen  236 KKLKEEKKQRLQKL-QDLRTKLLELWNLLDTSDEERQRFVHVTESEATEPN-SLSLDIIEQVEKEVDRLEQLKASN--MK  311 (660)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHhccCCHHHHHHHccccHHHhhccc-cccHHHHHHHHHHHHHHHHHHHHh--HH
Confidence            99999999999996 8999999999999999999887654422  122233 478999999999999999999988  66


Q ss_pred             HHHHHHHHhhHHHHH-HHHhcCC--cc-ccc-----cCCCChhhhHHHHHHHHHhcc-chHHHHHHHHHHHHHHHH
Q 009740          343 DKVEKWKHGAEEEQW-LDDYEKD--EN-RYS-----AGRGAHKNLKRAEKARILISK-LPSVVENLIAKVKAWEAE  408 (527)
Q Consensus       343 ~~vekw~~l~~e~~~-Le~~~~D--~~-R~~-----~~RG~h~~LlreEK~Rk~v~K-lP~l~~~L~~~l~~wE~e  408 (527)
                      ++|.+-..=++ +.| +--|+-+  .. ||.     .+...+..|+-.--..+.-.| ---+-+.+..++..|+..
T Consensus       312 eli~k~r~Ele-el~~~~h~s~~~e~~~~f~~~~~ds~~~d~~ell~~~d~~i~k~keea~srk~il~~ve~W~sa  386 (660)
T KOG4302|consen  312 ELIEKKRSELE-ELWRLLHYSEENESRRRFITYLIDSGTEDVLELLENIDNLIKKYKEEALSRKEILERVEKWESA  386 (660)
T ss_pred             HHHHHHHHHHH-HHHHHHhccccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            66666444332 233 2222221  11 222     134455555554111111112 333456677788888864

>PF03999 MAP65_ASE1: Microtubule associated protein (MAP65/ASE1 family); InterPro: IPR007145 This is a family of microtubule associated proteins

Probab=99.90  E-value=5.4e-24  Score=237.31  Aligned_cols=361  Identities=19%  Similarity=0.253  Sum_probs=67.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC------CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 009740            8 DCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFS------RGKGTLKQQISAIRSILEDLRSKKEQRIK   81 (527)
Q Consensus         8 ecl~vyr~kV~~~~~~k~~l~q~ia~~~~El~~L~~eLge~~~~~------~~~~tL~eql~~l~~~le~Lrk~K~eR~~   81 (527)
                      +|+..++..|+.....+...++.|..+..++..||..||..+...      ..++|-.+++..+..+++.|+.++..|+.
T Consensus        84 ~~~~~L~~~le~l~~~~~eR~~~~~~L~~~~~~l~~~Lg~~~~~~~~~~~~~~~l~S~~~l~~l~~~l~~L~~e~~~R~~  163 (619)
T PF03999_consen   84 EQLPKLRPQLEELRKEKEERMQEFKELQEQLEQLCEELGELPLCLNPFDIDESDLPSLEELEELRQHLQRLQEEKERRLE  163 (619)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            366778899999999999999999999999999999999764321      12355458999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccCCC-CCCcc-ccc----cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009740           82 EFSGIQFQIAQISSEIAGNGQ-SINSV-DAQ----VDECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLV  155 (527)
Q Consensus        82 ef~~l~~qi~~L~~eL~~~~~-~~~~~-~~~----~d~~dlS~~~L~~L~~~L~~Lq~Ek~~R~~kv~el~~~I~~L~~~  155 (527)
                      +|..+..+|..||.+||.++. ..... ..+    .+..+||.+.|+.|...+..|+.+|..|..++..+...|..||+.
T Consensus       164 ~v~~l~~~I~~l~~~L~~~~~~~~~e~~l~~~~~~~~~~~Ls~~~l~~L~~~~~~L~~~k~~r~~~~~~l~~~i~~LW~~  243 (619)
T PF03999_consen  164 EVRELREEIISLMEELGIDPERTSFEKDLLSYSEDEESFCLSDENLEKLQELLQELEEEKEEREEKLQELREKIEELWNR  243 (619)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCcccccchhhccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999885 22111 111    234679999999999999999999999999999999999999999


Q ss_pred             hCCChhhhhhcccCCCCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHhHHH
Q 009740          156 LSINFLETVNEVHPSLSDSKNVQSKSISNDTIARLTGVIHLLKQEKQQRLQK-LQSLGNALIKLWDLLETPVNEQRKVDH  234 (527)
Q Consensus       156 Lg~d~~~~~~~v~psl~d~~~~~~~~lS~~~L~~L~~~l~~L~~~K~~R~~k-i~~l~~~l~~LW~~L~~p~eEr~~F~~  234 (527)
                      |+++.+....++         ..+.++|.++|+.|..++++|+++|.++++. |...+.+|.+||+.|.+++++|..|..
T Consensus       244 L~~~~ee~~~F~---------~~~~~ls~~~i~~l~~El~RL~~lK~~~lk~~I~~~R~ei~elWd~~~~s~eer~~F~~  314 (619)
T PF03999_consen  244 LDVPEEEREAFL---------EENSGLSLDTIEALEEELERLEELKKQNLKEFIEKKRQEIEELWDKCHYSEEERQAFTP  314 (619)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hCCCHHHHHHHh---------hccCcchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence            999877654332         1356899999999999999999999999999 799999999999999999999999998


Q ss_pred             hhhccccccchhcccCCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHhhhhhccCCC
Q 009740          235 VTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGN  314 (527)
Q Consensus       235 ~~~~i~~s~~e~~~~~~LS~~~I~~~e~Ev~RLe~lK~~~mk~li~k~r~eLeelWd~~~~~~e~~~~~~~~~~~~~s~~  314 (527)
                      .+.            .+.+.++++.++.||.||++....+  +=|++.-.++..+|..+..-.+.......|.    +  
T Consensus       315 ~~~------------d~~~E~lL~~hE~Ei~~Lk~~~~~~--k~Il~~v~k~~~l~~~~~~Le~~~~D~~Rl~----~--  374 (619)
T PF03999_consen  315 FYI------------DSYTEELLELHEEEIERLKEEYESR--KPILELVEKWESLWEEMEELEESSKDPSRLN----N--  374 (619)
T ss_dssp             --------------------------------HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH-CCGG--------
T ss_pred             Hhc------------ccchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcChhhhc----c--
Confidence            874            4456899999999999999999986  2234666778999986543332221111222    1  


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhHHHHHHHHhcCCccccccCCCChhhhHHHHHHHHHhccchHH
Q 009740          315 VDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGAEEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSV  394 (527)
Q Consensus       315 ~~~e~lL~~~E~eI~~lke~~~~~k~Il~~vekw~~l~~e~~~Le~~~~D~~R~~~~RG~h~~LlreEK~Rk~v~KlP~l  394 (527)
                       -...||..-+..-.-.+.....-+.|...|..|+.         + ...|--|+   |-  .                 
T Consensus       375 -RGg~LLkEEk~rk~i~k~lPkle~~L~~~l~~wE~---------e-~g~pFlv~---G~--~-----------------  421 (619)
T PF03999_consen  375 -RGGHLLKEEKERKRIQKKLPKLEEELKKKLEEWEE---------E-HGKPFLVD---GE--R-----------------  421 (619)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------H-HTS--EET---TE--E-----------------
T ss_pred             -cccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH---------H-cCCeEEEc---Cc--c-----------------
Confidence             11335555544444456777777888888888832         1 12232233   33  1                 


Q ss_pred             HHHHHHHHHHHHHHcCCceEECCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009740          395 VENLIAKVKAWEAEKRIPFLYDKVPLLSILEEYTAQCQKREEEKRRCREQKRLQEQF  451 (527)
Q Consensus       395 ~~~L~~~l~~wE~e~g~~Fl~dG~~ll~~lee~~~~~~eKe~ek~~~r~~kk~~~q~  451 (527)
                         +...+.                  ++.++|..++++|+..+...+.+++.+.+.
T Consensus       422 ---~le~l~------------------e~~~~~~~~~~~k~~~~~~k~~~~~~~~~~  457 (619)
T PF03999_consen  422 ---YLEYLE------------------EYEEQWERKREEKERSKQQKKLQNQKQTEQ  457 (619)
T ss_dssp             ---HHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---HHHHHH------------------HHHHHHHhhhhhhccccccCCCCCCCcccc
Confidence               111111                  566899999999999888877666666553

One of its members is the yeast anaphase spindle elongation protein.; PDB: 3NRX_A 3NRY_A.

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins

Probab=95.07  E-value=5.5  Score=48.87  Aligned_cols=54  Identities=20%  Similarity=0.352  Sum_probs=40.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHcCCCHHHHHhH
Q 009740          179 SKSISNDTIARLTGVIHLLKQEKQ---QRLQKLQSLGNALIKLWDLLETPVNEQRKV  232 (527)
Q Consensus       179 ~~~lS~~~L~~L~~~l~~L~~~K~---~R~~ki~~l~~~l~~LW~~L~~p~eEr~~F  232 (527)
                      +.++.+.+|..|+..+..|+..-.   ++...+.+|..-+..+|..++--.+.+...
T Consensus       765 ~~GvD~~~I~~l~~~i~~L~~~l~~ie~~r~~V~eY~~~~~~~~~~~~~~~~~~~~l  821 (1201)
T PF12128_consen  765 GKGVDPERIQQLKQEIEQLEKELKRIEERRAEVIEYEDWLQEEWDKVDELREEKPEL  821 (1201)
T ss_pred             hCCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhhHH
Confidence            578888999999999998886544   344458899999999999866444443333

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]

Probab=94.51  E-value=5.8  Score=47.17  Aligned_cols=102  Identities=20%  Similarity=0.204  Sum_probs=66.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHhHHHhhhccccccchhcccCCChHHHHHHHH
Q 009740          182 ISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSSSVDEVSMLGCLALDVIEQME  261 (527)
Q Consensus       182 lS~~~L~~L~~~l~~L~~~K~~R~~ki~~l~~~l~~LW~~L~~p~eEr~~F~~~~~~i~~s~~e~~~~~~LS~~~I~~~e  261 (527)
                      .++.++.+++..+..|+.+...-..++..|...+..+=.++.--..+...+......+..+          +.++...++
T Consensus       932 ~s~~~i~k~q~~l~~le~~~~~~e~e~~~L~e~~~~~~~k~~E~~~~~~e~~~~~~E~k~~----------~~~~k~~~e 1001 (1293)
T KOG0996|consen  932 TSDRNIAKAQKKLSELEREIEDTEKELDDLTEELKGLEEKAAELEKEYKEAEESLKEIKKE----------LRDLKSELE 1001 (1293)
T ss_pred             cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHH
Confidence            4677888888888888888888888888888888777776655444555555544433322          345555555


Q ss_pred             HHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHhc
Q 009740          262 VEVEHLNEYKASK--MKELVFKRQHELEEIYKGV  293 (527)
Q Consensus       262 ~Ev~RLe~lK~~~--mk~li~k~r~eLeelWd~~  293 (527)
                      ..=+...++|..+  |+..+++.+.+|.++=...
T Consensus      1002 ~i~k~~~~lk~~rId~~~K~e~~~~~l~e~~~~~ 1035 (1293)
T KOG0996|consen 1002 NIKKSENELKAERIDIENKLEAINGELNEIESKI 1035 (1293)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHhhh
Confidence            5555666666655  4555666666666654433

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD

Probab=93.46  E-value=17  Score=41.48  Aligned_cols=40  Identities=13%  Similarity=0.267  Sum_probs=24.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcC
Q 009740          255 DVIEQMEVEVEHLNEYKASKMKELVFKRQHELEEIYKGVH  294 (527)
Q Consensus       255 ~~I~~~e~Ev~RLe~lK~~~mk~li~k~r~eLeelWd~~~  294 (527)
                      ..++.++.=...|..++.......+..+..++.+++..+.
T Consensus       480 ~~~~~~~~~~~~l~~~~~~l~~~~~~~le~~~~~~f~~l~  519 (650)
T TIGR03185       480 RAITIADKAKKTLKEFREKLLERKLQQLEEEITKSFKKLM  519 (650)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4455555555566666666666666666666666666553

This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria.

>TIGR00606 rad50 rad50

Probab=91.35  E-value=46  Score=41.40  Aligned_cols=309  Identities=15%  Similarity=0.116  Sum_probs=136.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--HHHHHHH
Q 009740            6 EQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQQISAIRSILEDLRSKK--EQRIKEF   83 (527)
Q Consensus         6 e~ecl~vyr~kV~~~~~~k~~l~q~ia~~~~El~~L~~eLge~~~~~~~~~tL~eql~~l~~~le~Lrk~K--~eR~~ef   83 (527)
                      .|.+++-.+..+.............++....++..+-.+|+.-......--.+...+..+...++.+....  .....++
T Consensus       424 ~q~~L~ei~~~l~~~eq~~~~~~e~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  503 (1311)
T TIGR00606       424 KQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETLKKEV  503 (1311)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccChHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence            34555555555555555555666666666666667777776533221000112233344444443333221  1122222


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCChhh
Q 009740           84 SGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHE-LSLVLSINFLE  162 (527)
Q Consensus        84 ~~l~~qi~~L~~eL~~~~~~~~~~~~~~d~~dlS~~~L~~L~~~L~~Lq~Ek~~R~~kv~el~~~I~~-L~~~Lg~d~~~  162 (527)
                      ...+.++..|-..+..-           +...-...........+.-+++++..+...+..+...... +...+| ++..
T Consensus       504 ~~~~~~~~~le~~~~~l-----------~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~~  571 (1311)
T TIGR00606       504 KSLQNEKADLDRKLRKL-----------DQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLG-YFPN  571 (1311)
T ss_pred             HHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCC
Confidence            22222222222222211           0011233444556667777777777777766666665533 333334 3310


Q ss_pred             hhhcccCCCCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHhHHHhhhccccc
Q 009740          163 TVNEVHPSLSDSKNVQSKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSSS  242 (527)
Q Consensus       163 ~~~~v~psl~d~~~~~~~~lS~~~L~~L~~~l~~L~~~K~~R~~ki~~l~~~l~~LW~~L~~p~eEr~~F~~~~~~i~~s  242 (527)
                      .     |.            -...+..+...+..++.......+.+..+-.++..+=..+.--..+.+.+.....     
T Consensus       572 ~-----~~------------l~~~~~~~~~el~~~~~~~~~~~~el~~~e~~l~~~~~~l~~~~~eL~~~~~~i~-----  629 (1311)
T TIGR00606       572 K-----KQ------------LEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLF-----  629 (1311)
T ss_pred             c-----HH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence            0     11            1334444444444444444443333443333333333333333333333332221     


Q ss_pred             cchhcccCCChHHHHHHHHHHHHHHHHHHH------HhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHhhhhhccCCCCC
Q 009740          243 VDEVSMLGCLALDVIEQMEVEVEHLNEYKA------SKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNVD  316 (527)
Q Consensus       243 ~~e~~~~~~LS~~~I~~~e~Ev~RLe~lK~------~~mk~li~k~r~eLeelWd~~~~~~e~~~~~~~~~~~~~s~~~~  316 (527)
                        +..++..+ .++|..++.++.....-..      ..+..+|.....+=...|..|+=+-+.......|..-+.+. ++
T Consensus       630 --~~~~~~~~-~~~L~~~~~~l~~~~~~~~~~~~~~~~~~k~ie~a~~~~~~~C~LC~R~f~~eee~~~f~~~L~~~-~~  705 (1311)
T TIGR00606       630 --DVCGSQDE-ESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSK-LR  705 (1311)
T ss_pred             --cCCCchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcCCCCCCCCCChhHHHHHHHHHHHH-Hh
Confidence              00111222 3355666655555442211      12333333331121225555544433322223454333321 12


Q ss_pred             h-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhh
Q 009740          317 L-SDLLSSMDDQIAKAKEEALSRKDILDKVEKWKHGA  352 (527)
Q Consensus       317 ~-e~lL~~~E~eI~~lke~~~~~k~Il~~vekw~~l~  352 (527)
                      + -+.+...+..+..++..+..-..+-..|..|..+.
T Consensus       706 ~~p~~~~~~~~~~~~~~~~~e~l~~l~~~~~~~~~l~  742 (1311)
T TIGR00606       706 LAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLK  742 (1311)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence            2 33466667777777777777777766777776665

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5

Probab=90.32  E-value=37  Score=38.59  Aligned_cols=111  Identities=17%  Similarity=0.170  Sum_probs=69.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009740           16 KVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISS   95 (527)
Q Consensus        16 kV~~~~~~k~~l~q~ia~~~~El~~L~~eLge~~~~~~~~~tL~eql~~l~~~le~Lrk~K~eR~~ef~~l~~qi~~L~~   95 (527)
                      .|......|......|..++..|+.|-..+..++.+..+.+|. +....+...++.|+++++.-..++......-+.|+.
T Consensus        37 ev~~L~eEk~~~~~~V~eLE~sL~eLk~q~~~~~~~~~pa~ps-e~E~~Lq~E~~~L~kElE~L~~qlqaqv~~ne~Ls~  115 (617)
T PF15070_consen   37 EVRTLKEEKEHDISRVQELERSLSELKNQMAEPPPPEPPAGPS-EVEQQLQAEAEHLRKELESLEEQLQAQVENNEQLSR  115 (617)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccccccch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3556777888888889999999999999998877554455554 344566667777777665555444443322232322


Q ss_pred             HhccCCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009740           96 EIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEKNLRLQKVNN  144 (527)
Q Consensus        96 eL~~~~~~~~~~~~~~d~~dlS~~~L~~L~~~L~~Lq~Ek~~R~~kv~e  144 (527)
                      ...                 --..+|.++...+..++....+|...+..
T Consensus       116 L~~-----------------EqEerL~ELE~~le~~~e~~~D~~kLLe~  147 (617)
T PF15070_consen  116 LNQ-----------------EQEERLAELEEELERLQEQQEDRQKLLEQ  147 (617)
T ss_pred             HHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            111                 12456667777777777666655554433

>PRK04778 septation ring formation regulator EzrA; Provisional

Probab=89.55  E-value=41  Score=37.88  Aligned_cols=264  Identities=14%  Similarity=0.204  Sum_probs=129.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-CCCccccccCCCCCcHHHHHHHHHHHHHHH------
Q 009740           60 QQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQ-SINSVDAQVDECDLTVKKLGELKTHLRELQ------  132 (527)
Q Consensus        60 eql~~l~~~le~Lrk~K~eR~~ef~~l~~qi~~L~~eL~~~~~-~~~~~~~~~d~~dlS~~~L~~L~~~L~~Lq------  132 (527)
                      +++..+...|++|...-.+=..++..++..-+.+-..|-...+ +|+    .   -+.-..+|+.+......+.      
T Consensus       119 ~~~~~i~~~l~~l~~~e~~nr~~v~~l~~~y~~~rk~ll~~~~~~G~----a---~~~le~~l~~~e~~f~~f~~l~~~G  191 (569)
T PRK04778        119 EDIEQILEELQELLESEEKNREEVEQLKDLYRELRKSLLANRFSFGP----A---LDELEKQLENLEEEFSQFVELTESG  191 (569)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc----h---HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            3344455555555555555555666666666666665554433 221    1   1223445555555554443      


Q ss_pred             ---------HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhcccCCCCCCccccCCCC----CHHHHHHHHHHHHH---
Q 009740          133 ---------NEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQSKSI----SNDTIARLTGVIHL---  196 (527)
Q Consensus       133 ---------~Ek~~R~~kv~el~~~I~~L~~~Lg~d~~~~~~~v~psl~d~~~~~~~~l----S~~~L~~L~~~l~~---  196 (527)
                               ......+..+...+..|=.|+..+...|...+.++...+.+.. .+.+.+    -+..|..|+..+..   
T Consensus       192 d~~~A~e~l~~l~~~~~~l~~~~~~iP~l~~~~~~~~P~ql~el~~gy~~m~-~~gy~~~~~~i~~~i~~l~~~i~~~~~  270 (569)
T PRK04778        192 DYVEAREILDQLEEELAALEQIMEEIPELLKELQTELPDQLQELKAGYRELV-EEGYHLDHLDIEKEIQDLKEQIDENLA  270 (569)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HcCCCCCCCChHHHHHHHHHHHHHHHH
Confidence                     2334455566666777767777776655444433321111110 011222    25667777777776   


Q ss_pred             -HHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHhHHHhhhccccccchhcccCCChHHHHHHHHHHHHHHHHHHH--
Q 009740          197 -LKQEKQQRLQK-LQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKA--  272 (527)
Q Consensus       197 -L~~~K~~R~~k-i~~l~~~l~~LW~~L~~p~eEr~~F~~~~~~i~~s~~e~~~~~~LS~~~I~~~e~Ev~RLe~lK~--  272 (527)
                       |....-..... +..+...|..|.+.|.--..-+.........+..       .-.-.......+..|+++|.+=..  
T Consensus       271 ~l~~l~l~~~~~~~~~i~~~Id~Lyd~lekE~~A~~~vek~~~~l~~-------~l~~~~e~~~~l~~Ei~~l~~sY~l~  343 (569)
T PRK04778        271 LLEELDLDEAEEKNEEIQERIDQLYDILEREVKARKYVEKNSDTLPD-------FLEHAKEQNKELKEEIDRVKQSYTLN  343 (569)
T ss_pred             HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-------HHHHHHHHHHHHHHHHHHHHHccccC
Confidence             55444444444 7788899999999986554433332222111100       000023344455555555544322  


Q ss_pred             HhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 009740          273 SKMKELVFKRQHELEEIYKGVHMDVDSDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKVEKW  348 (527)
Q Consensus       273 ~~mk~li~k~r~eLeelWd~~~~~~e~~~~~~~~~~~~~s~~~~~e~lL~~~E~eI~~lke~~~~~k~Il~~vekw  348 (527)
                      ..--..+.....+|.++-..+.-          ....+......-+++...++.-..++++.-..+..|.+.|...
T Consensus       344 ~~e~~~~~~lekeL~~Le~~~~~----------~~~~i~~~~~~ysel~e~leel~e~leeie~eq~ei~e~l~~L  409 (569)
T PRK04778        344 ESELESVRQLEKQLESLEKQYDE----------ITERIAEQEIAYSELQEELEEILKQLEEIEKEQEKLSEMLQGL  409 (569)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHH----------HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11112233334444444332221          1111222223456666666666666777777777777777654

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]

Probab=89.27  E-value=70  Score=41.05  Aligned_cols=42  Identities=26%  Similarity=0.381  Sum_probs=29.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 009740            6 EQDCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEH   48 (527)
Q Consensus         6 e~ecl~vyr~kV~~~~~~k~~l~q~ia~~~~El~~L~~eLge~   48 (527)
                      |-+| -..+..++..+..+..+-..++....|+..|-+.++..
T Consensus      1047 e~el-~~~~e~~~~~~~~~~el~~~l~kke~El~~l~~k~e~e 1088 (1930)
T KOG0161|consen 1047 EGEL-KDLQESIEELKKQKEELDNQLKKKESELSQLQSKLEDE 1088 (1930)
T ss_pred             HHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence            3444 44555566677777788888888888888887777764

>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=88.62  E-value=18  Score=35.86  Aligned_cols=108  Identities=19%  Similarity=0.232  Sum_probs=77.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009740            8 DCLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQQISAIRSILEDLRSKKEQRIKEFSGIQ   87 (527)
Q Consensus         8 ecl~vyr~kV~~~~~~k~~l~q~ia~~~~El~~L~~eLge~~~~~~~~~tL~eql~~l~~~le~Lrk~K~eR~~ef~~l~   87 (527)
                      |||.=.|.|+.+..+.+++|++.++.+..|-                     ..|..|....+.|..+|....+++..+.
T Consensus         1 e~i~~ir~K~~~lek~k~~i~~e~~~~e~ee---------------------~~L~e~~kE~~~L~~Er~~h~eeLrqI~   59 (230)
T PF10146_consen    1 EKIKEIRNKTLELEKLKNEILQEVESLENEE---------------------KCLEEYRKEMEELLQERMAHVEELRQIN   59 (230)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5777789999999999999999998887764                     3456778888888999988888998888


Q ss_pred             HHHHHHHHHhccCCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCh
Q 009740           88 FQIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLV-LSINF  160 (527)
Q Consensus        88 ~qi~~L~~eL~~~~~~~~~~~~~~d~~dlS~~~L~~L~~~L~~Lq~Ek~~R~~kv~el~~~I~~L~~~-Lg~d~  160 (527)
                      .+|..|=+.|...                 ....+..+..+..+..|+.       .+.+.|..+-.. +|++.
T Consensus        60 ~DIn~lE~iIkqa-----------------~~er~~~~~~i~r~~eey~-------~Lk~~in~~R~e~lgl~~  109 (230)
T PF10146_consen   60 QDINTLENIIKQA-----------------ESERNKRQEKIQRLYEEYK-------PLKDEINELRKEYLGLEP  109 (230)
T ss_pred             HHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHcCCCC
Confidence            8888877776442                 2233345555555555554       444555555555 88764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a family of proteins which appears to have a highly conserved zinc finger domain at the C-terminal end, described as -C-X2-CH-X3-H-X5-C-X2-C-. The structure is predicted to contain a coiled coil. Members of this family are annotated as being tumour-associated antigen HCA127 in humans, but this could not be confirmed.

>PRK11637 AmiB activator; Provisional

Probab=87.06  E-value=48  Score=35.78  Aligned_cols=92  Identities=11%  Similarity=0.199  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHHH
Q 009740           56 GTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEK  135 (527)
Q Consensus        56 ~tL~eql~~l~~~le~Lrk~K~eR~~ef~~l~~qi~~L~~eL~~~~~~~~~~~~~~d~~dlS~~~L~~L~~~L~~Lq~Ek  135 (527)
                      ..+.+++..+..+++.+.+...+-..+...+..++..+-..|.........   .-.+-.-...++..++..|..++.+.
T Consensus        43 ~~~~~~l~~l~~qi~~~~~~i~~~~~~~~~~~~~l~~l~~qi~~~~~~i~~---~~~~i~~~~~ei~~l~~eI~~~q~~l  119 (428)
T PRK11637         43 SDNRDQLKSIQQDIAAKEKSVRQQQQQRASLLAQLKKQEEAISQASRKLRE---TQNTLNQLNKQIDELNASIAKLEQQQ  119 (428)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            346677777777777766666655566666666666666655443211100   00001123455666666666666666


Q ss_pred             HHHHHHHHHHHHHHH
Q 009740          136 NLRLQKVNNNLSTIH  150 (527)
Q Consensus       136 ~~R~~kv~el~~~I~  150 (527)
                      ..+...+...+....
T Consensus       120 ~~~~~~l~~rlra~Y  134 (428)
T PRK11637        120 AAQERLLAAQLDAAF  134 (428)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            666654444444443

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD

Probab=86.91  E-value=63  Score=36.96  Aligned_cols=242  Identities=12%  Similarity=0.167  Sum_probs=124.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHHH
Q 009740           56 GTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEK  135 (527)
Q Consensus        56 ~tL~eql~~l~~~le~Lrk~K~eR~~ef~~l~~qi~~L~~eL~~~~~~~~~~~~~~d~~dlS~~~L~~L~~~L~~Lq~Ek  135 (527)
                      ..+..++..+...+..+..+...-.+++..++.++..+...+..-.....      ....-..+..+.+...+..++.+.
T Consensus       205 ~~~~~~~~~le~el~~l~~~~e~l~~~i~~l~~ele~a~~~l~~l~~~~~------~~GG~~~~~r~~Le~ei~~le~e~  278 (650)
T TIGR03185       205 SSILSEIEALEAELKEQSEKYEDLAQEIAHLRNELEEAQRSLESLEKKFR------SEGGDLFEEREQLERQLKEIEAAR  278 (650)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcchHHHHHHHHHHHHHHHHHHH
Confidence            34556777777777777777776666666666666666665543211000      001123455667777777777777


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCChhhhhhcccCCCCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 009740          136 NLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPSLSDSKNVQSKSISNDTIARLTGVIHLLKQEKQQRLQKLQS-LGNA  214 (527)
Q Consensus       136 ~~R~~kv~el~~~I~~L~~~Lg~d~~~~~~~v~psl~d~~~~~~~~lS~~~L~~L~~~l~~L~~~K~~R~~ki~~-l~~~  214 (527)
                      .++.+.+..+.+.       .                     -++.+....|..+...+.....-+  +.+.+.+ +...
T Consensus       279 ~e~~~~l~~l~~~-------~---------------------~p~~l~~~ll~~~~~q~~~e~~~~--~~~~~~~~l~~~  328 (650)
T TIGR03185       279 KANRAQLRELAAD-------P---------------------LPLLLIPNLLDSTKAQLQKEEQSQ--QNQLTQEELEER  328 (650)
T ss_pred             HHHHHHHHHHhcc-------c---------------------CCHhhhHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence            7666644333211       1                     145566677888877777665333  3333433 3366


Q ss_pred             HHHHHHHc---CCCHHHHHhHHHhhhc-cccccchhcccCCChHHHHHHHHHHHHHHHHHHHHhHHHH---HHHHHHHHH
Q 009740          215 LIKLWDLL---ETPVNEQRKVDHVTSL-VSSSVDEVSMLGCLALDVIEQMEVEVEHLNEYKASKMKEL---VFKRQHELE  287 (527)
Q Consensus       215 l~~LW~~L---~~p~eEr~~F~~~~~~-i~~s~~e~~~~~~LS~~~I~~~e~Ev~RLe~lK~~~mk~l---i~k~r~eLe  287 (527)
                      ...||..+   ..+....+........ ..+...+...+-+++...+..+..-++.+..-....+..+   +.+...+|.
T Consensus       329 ~~~i~~~~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~el~  408 (650)
T TIGR03185       329 DKELLESLPKLALPAEHVKEIAAELAEIDKPATTDSEIPHRLSGSELTQLEVLIQQVKRELQDAKSQLLKELRELEEELA  408 (650)
T ss_pred             HHHHHHHHhhccCCHHHHHHHHHHHHhhcccccccccccccCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            66777666   5555444333332211 1111112222344556656666655555442222233333   245666777


Q ss_pred             HHHHhcCCChhhHHHHHhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 009740          288 EIYKGVHMDVDSDAARQILISLIDSGNVDLSDLLSSMDDQIAKAKEEALSRKDILDKV  345 (527)
Q Consensus       288 elWd~~~~~~e~~~~~~~~~~~~~s~~~~~e~lL~~~E~eI~~lke~~~~~k~Il~~v  345 (527)
                      ++=.++.-.++.-    .+.        ...+-+..++.+|..++..+.....-++..
T Consensus       409 ~l~~~l~~~~~~e----~i~--------~l~e~l~~l~~~l~~~~~~~~~~~~~~~~~  454 (650)
T TIGR03185       409 EVDKKISTIPSEE----QIA--------QLLEELGEAQNELFRSEAEIEELLRQLETL  454 (650)
T ss_pred             HHHHHHhcCCChH----HHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7766665544321    011        112335555566666655555554444433

This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria.

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []

Probab=86.82  E-value=4.2  Score=42.40  Aligned_cols=131  Identities=16%  Similarity=0.232  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009740            9 CLDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQQISAIRSILEDLRSKKEQRIKEFSGIQF   88 (527)
Q Consensus         9 cl~vyr~kV~~~~~~k~~l~q~ia~~~~El~~L~~eLge~~~~~~~~~tL~eql~~l~~~le~Lrk~K~eR~~ef~~l~~   88 (527)
                      ..+++...++.+......+....+.+..++..|-....+.....      .+.|..++..|..+...-..+.+.+.+++.
T Consensus       164 D~~~L~~~~~~l~~~~~~l~~~~~~L~~e~~~Lk~~~~e~~~~D------~~eL~~lr~eL~~~~~~i~~~k~~l~el~~  237 (325)
T PF08317_consen  164 DYAKLDKQLEQLDELLPKLRERKAELEEELENLKQLVEEIESCD------QEELEALRQELAEQKEEIEAKKKELAELQE  237 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444455555555555666666666666666655544422111      144555555555555555555555555555


Q ss_pred             HHHHHHHHhccCCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhCCChhh
Q 009740           89 QIAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEKNLR----LQKVNNNLSTIHELSLVLSINFLE  162 (527)
Q Consensus        89 qi~~L~~eL~~~~~~~~~~~~~~d~~dlS~~~L~~L~~~L~~Lq~Ek~~R----~~kv~el~~~I~~L~~~Lg~d~~~  162 (527)
                      ++..+-..+..                 ...+..++...|..+++.....    ...|..+...+..|....|..+..
T Consensus       238 el~~l~~~i~~-----------------~~~~k~~l~~eI~e~~~~~~~~r~~t~~Ev~~Lk~~~~~Le~~~gw~~~~  298 (325)
T PF08317_consen  238 ELEELEEKIEE-----------------LEEQKQELLAEIAEAEKIREECRGWTRSEVKRLKAKVDALEKLTGWKIVS  298 (325)
T ss_pred             HHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHCcEEEE
Confidence            55555554422                 1234445666666666555432    345777778888888888876644

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]

Probab=85.79  E-value=85  Score=37.36  Aligned_cols=231  Identities=14%  Similarity=0.162  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009740           12 IYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGK-GTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQI   90 (527)
Q Consensus        12 vyr~kV~~~~~~k~~l~q~ia~~~~El~~L~~eLge~~~~~~~~-~tL~eql~~l~~~le~Lrk~K~eR~~ef~~l~~qi   90 (527)
                      .|..-|++....=......+..+..++..|-..+...-..+... -.+...++.+...+++-.+.-+.|.++|..++-+.
T Consensus       745 ~~~e~v~e~~~~Ike~~~~~k~~~~~i~~lE~~~~d~~~~re~rlkdl~keik~~k~~~e~~~~~~ek~~~e~e~l~lE~  824 (1174)
T KOG0933|consen  745 ELLEEVEESEQQIKEKERALKKCEDKISTLEKKMKDAKANRERRLKDLEKEIKTAKQRAEESSKELEKRENEYERLQLEH  824 (1174)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33333444333333334455555555555555555433221111 12223345555666666666667777777777777


Q ss_pred             HHHHHHhccCCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhcccCC
Q 009740           91 AQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHPS  170 (527)
Q Consensus        91 ~~L~~eL~~~~~~~~~~~~~~d~~dlS~~~L~~L~~~L~~Lq~Ek~~R~~kv~el~~~I~~L~~~Lg~d~~~~~~~v~ps  170 (527)
                      ..+-.++.........   .......-...+..+...+...+.+...-+..+......+..+-.+++.-....-  .   
T Consensus       825 e~l~~e~~~~k~~l~~---~~~~~~~l~~e~~~l~~kv~~~~~~~~~~~~el~~~k~k~~~~dt~i~~~~~~~e--~---  896 (1174)
T KOG0933|consen  825 EELEKEISSLKQQLEQ---LEKQISSLKSELGNLEAKVDKVEKDVKKAQAELKDQKAKQRDIDTEISGLLTSQE--K---  896 (1174)
T ss_pred             HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHhhhHHHhhhhhHHH--H---
Confidence            7777766543210000   0000011123333444444444444444444444444444444333321100000  0   


Q ss_pred             CCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHhHHHhhhccccccchhcccC
Q 009740          171 LSDSKNVQSKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSSSVDEVSMLG  250 (527)
Q Consensus       171 l~d~~~~~~~~lS~~~L~~L~~~l~~L~~~K~~R~~ki~~l~~~l~~LW~~L~~p~eEr~~F~~~~~~i~~s~~e~~~~~  250 (527)
                       +    .+........+..|...+.+++.+++.-..++..+..+..-       =.+|...|......+           
T Consensus       897 -~----~~e~~~~~l~~kkle~e~~~~~~e~~~~~k~v~~l~~k~~w-------i~~ek~~fgk~gt~y-----------  953 (1174)
T KOG0933|consen  897 -C----LSEKSDGELERKKLEHEVTKLESEKANARKEVEKLLKKHEW-------IGDEKRLFGKKGTDY-----------  953 (1174)
T ss_pred             -H----HHHhhcccchHHHHHhHHHHhhhhHHHHHHHHHHHHHhccc-------hhHHHHhhcCCCCcc-----------
Confidence             0    01233455678899999999999999888888887777652       137888888764322           


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHH
Q 009740          251 CLALDVIEQMEVEVEHLNEYKAS  273 (527)
Q Consensus       251 ~LS~~~I~~~e~Ev~RLe~lK~~  273 (527)
                      ++...+...+..++.+|+..+..
T Consensus       954 Df~~~~p~~are~l~~Lq~k~~~  976 (1174)
T KOG0933|consen  954 DFESYDPHEAREELKKLQEKKEK  976 (1174)
T ss_pred             ccccCCHhHHHHHHHHhhHHHHH
Confidence            22333445566666666655443

>PRK02224 chromosome segregation protein; Provisional

Probab=85.79  E-value=83  Score=37.22  Aligned_cols=351  Identities=13%  Similarity=0.127  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009740           10 LDIYRRKVERTRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQ   89 (527)
Q Consensus        10 l~vyr~kV~~~~~~k~~l~q~ia~~~~El~~L~~eLge~~~~~~~~~tL~eql~~l~~~le~Lrk~K~eR~~ef~~l~~q   89 (527)
                      |.-++..+++.......+.+.+..+..++..+-..+..-......-.++...+..+...+..+.....+...++..+...
T Consensus       208 l~~~~~~l~el~~~i~~~~~~~~~l~~~l~~l~~~~~el~~~~~~l~~l~~~~~~l~~~i~~~e~~~~~l~~~i~~~~~~  287 (880)
T PRK02224        208 LNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRER  287 (880)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH


Q ss_pred             HHHHHHHhccCCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhcccC
Q 009740           90 IAQISSEIAGNGQSINSVDAQVDECDLTVKKLGELKTHLRELQNEKNLRLQKVNNNLSTIHELSLVLSINFLETVNEVHP  169 (527)
Q Consensus        90 i~~L~~eL~~~~~~~~~~~~~~d~~dlS~~~L~~L~~~L~~Lq~Ek~~R~~kv~el~~~I~~L~~~Lg~d~~~~~~~v~p  169 (527)
                      +..+-..+..-.............-..-...+..-...+...-.+....+..+..-...+..-...|.-.....-.    
T Consensus       288 ~~~le~e~~~l~~~l~~~~~~~~~l~~~~~~l~~k~~el~~~l~~~~~~l~~~~~~~e~~~~~~~~le~~~~~l~~----  363 (880)
T PRK02224        288 LEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELRE----  363 (880)
T ss_pred             HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----


Q ss_pred             CCCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHhHHHhhhccccccchhccc
Q 009740          170 SLSDSKNVQSKSISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLLETPVNEQRKVDHVTSLVSSSVDEVSML  249 (527)
Q Consensus       170 sl~d~~~~~~~~lS~~~L~~L~~~l~~L~~~K~~R~~ki~~l~~~l~~LW~~L~~p~eEr~~F~~~~~~i~~s~~e~~~~  249 (527)
                                      .+..+...+..+...-..-...+..+...+..+=..+.....+.+.+......+          
T Consensus       364 ----------------~~~~l~~~~~~~~~~l~~~~~~l~~l~~el~el~~~l~~~~~~~~~~e~~l~~l----------  417 (880)
T PRK02224        364 ----------------EAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEEL----------  417 (880)
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHH----------


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHHHHhcCCChhhHHHHHhhhhhccCCCCChHHHHHHHHHHH
Q 009740          250 GCLALDVIEQMEVEVEHLNEYKASKMKELVFKRQHEL-EEIYKGVHMDVDSDAARQILISLIDSGNVDLSDLLSSMDDQI  328 (527)
Q Consensus       250 ~~LS~~~I~~~e~Ev~RLe~lK~~~mk~li~k~r~eL-eelWd~~~~~~e~~~~~~~~~~~~~s~~~~~e~lL~~~E~eI  328 (527)
                          ..-++.+..++..++..... ....+......| ...|-.|+-+.+.. ....|+.-+.........-++.++.++
T Consensus       418 ----~~~~~~l~~~~~~~~~~~~~-~~~~l~~~~~~l~~~~Cp~C~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~~l  491 (880)
T PRK02224        418 ----REERDELREREAELEATLRT-ARERVEEAEALLEAGKCPECGQPVEGS-PHVETIEEDRERVEELEAELEDLEEEV  491 (880)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccCCCCCCcCCCc-chhhhHHHHHHHHHHHHHHHHHHHHHH


Q ss_pred             HHHHHHHHhhhHHHHHHHHHHHhhHHHHHHHHhcCCccccccCCCChhhhHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Q 009740          329 AKAKEEALSRKDILDKVEKWKHGAEEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISKLPSVVENLIAKVKAWEAE  408 (527)
Q Consensus       329 ~~lke~~~~~k~Il~~vekw~~l~~e~~~Le~~~~D~~R~~~~RG~h~~LlreEK~Rk~v~KlP~l~~~L~~~l~~wE~e  408 (527)
                      ..++..+..-+.+.+.-.+...+......+++          -+..  .+-+-+....++..+-.-++.|...+..|+.+
T Consensus       492 ~~~~~~~e~l~~~~~~~~~l~~l~~~~~~l~~----------~~~~--~~e~le~~~~~~~~l~~e~~~l~~~~~~~~~~  559 (880)
T PRK02224        492 EEVEERLERAEDLVEAEDRIERLEERREDLEE----------LIAE--RRETIEEKRERAEELRERAAELEAEAEEKREA  559 (880)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHH--HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=85.31  E-value=34  Score=39.32  Aligned_cols=71  Identities=18%  Similarity=0.144  Sum_probs=39.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009740           20 TRKYKADLHQSLADAEAEIACLVSALGEHASFSRGKGTLKQQISAIRSILEDLRSKKEQRIKEFSGIQFQIAQI   93 (527)
Q Consensus        20 ~~~~k~~l~q~ia~~~~El~~L~~eLge~~~~~~~~~tL~eql~~l~~~le~Lrk~K~eR~~ef~~l~~qi~~L   93 (527)
                      .+..+++|.+.+..+..+++.|...|+.-...   -+|-++.++.+..+.|.+..+..+-...+.+++..+..+
T Consensus       435 ~nak~~ql~~eletLn~k~qqls~kl~Dvr~~---~tt~kt~ie~~~~q~e~~isei~qlqarikE~q~kl~~l  505 (1118)
T KOG1029|consen  435 LNAKKKQLQQELETLNFKLQQLSGKLQDVRVD---ITTQKTEIEEVTKQRELMISEIDQLQARIKELQEKLQKL  505 (1118)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhheec---cchHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            55667778888888888888877777654321   134444444444444444444444444444444444433

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type

Probab=85.07  E-value=99  Score=37.48  Aligned_cols=25  Identities=20%  Similarity=0.307  Sum_probs=17.1

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHh
Q 009740          250 GCLALDVIEQMEVEVEHLNEYKASK  274 (527)
Q Consensus       250 ~~LS~~~I~~~e~Ev~RLe~lK~~~  274 (527)
                      +......|+.++.-..+++.++.+.
T Consensus       971 ~~vN~~Ai~~~~~~~~~~~~l~~q~  995 (1164)
T TIGR02169       971 EPVNMLAIQEYEEVLKRLDELKEKR  995 (1164)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHH
Confidence            4456677777777777777776664

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent.

>PRK03918 chromosome segregation protein; Provisional

Probab=83.46  E-value=1e+02  Score=36.37  Aligned_cols=41  Identities=17%  Similarity=0.092  Sum_probs=26.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 009740          182 ISNDTIARLTGVIHLLKQEKQQRLQKLQSLGNALIKLWDLL  222 (527)
Q Consensus       182 lS~~~L~~L~~~l~~L~~~K~~R~~ki~~l~~~l~~LW~~L  222 (527)
                      ++...+..+...+..++.....-...+..+...+..|...+
T Consensus       656 ~~~~~~~~l~~~~~~l~~~l~~l~~~~~~l~~~i~~l~~~i  696 (880)
T PRK03918        656 YSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTL  696 (880)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45566677777777776666666666666666666666554

>PHA02562 46 endonuclease subunit; Provisional

Probab=80.75  E-value=31  Score=38.32  Aligned_cols=18  Identities=17%  Similarity=0.220  Sum_probs=11.2

Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 009740          186 TIARLTGVIHLLKQEKQQ  203 (527)
Q Consensus       186 ~L~~L~~~l~~L~~~K~~  203 (527)
                      .++.+...+..+..++..
T Consensus       387 ~l~~~~~~~~~~~ke~~~  404 (562)
T PHA02562        387 ELDKIVKTKSELVKEKYH  404 (562)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            566666666666555544

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins

Probab=80.69  E-value=1.5e+02  Score=36.55  Aligned_cols=44  Identities=16%  Similarity=0.148  Sum_probs=32.4

Q ss_pred             CCCcHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhC
Q 009740          114 CDLTVKKLGELKTHLRELQNEK---NLRLQKVNNNLSTIHELSLVLS  157 (527)
Q Consensus       114 ~dlS~~~L~~L~~~L~~Lq~Ek---~~R~~kv~el~~~I~~L~~~Lg  157 (527)
                      .++....|..|+..+..|.++.   ..+...|.++..-+...|..+.
T Consensus       766 ~GvD~~~I~~l~~~i~~L~~~l~~ie~~r~~V~eY~~~~~~~~~~~~  812 (1201)
T PF12128_consen  766 KGVDPERIQQLKQEIEQLEKELKRIEERRAEVIEYEDWLQEEWDKVD  812 (1201)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhh
Confidence            3456778888888888888665   5567778888888888877644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	527
3nrx_A	130	Protein regulator of cytokinesis 1; spectrin fold,	7e-31
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-18

>3nrx_A Protein regulator of cytokinesis 1; spectrin fold, microtubule binding domain, protein binding; 1.75A {Homo sapiens} PDB: 3nry_A Length = 130

 Score =  115 bits (289), Expect = 7e-31
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 329 AKAKEEALSRKDILDKVEKWKHGAEEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILI 388
           A  K      K++ + V+KW+         +    D NR++   G   NL + EK R  +
Sbjct: 3   AALKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRFTNRGG---NLLKEEKQRAKL 59

Query: 389 SK-LPSVVENLIAKVKAWEAEKRIPFLYDKVPLLSILEEYTAQCQKREEEKRRCREQKRL 447
            K LP + E L A+++ WE E    F+ +    +  + E     +    EK R +++++L
Sbjct: 60  QKMLPKLEEELKARIELWEQEHSKAFMVNGQKFMEYVAEQW---EMHRLEKERAKQERQL 116

Query: 448 QEQFAAEQEAIYGS 461
           + +   E E +YGS
Sbjct: 117 KNKKQTETEMLYGS 130

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 87.6 bits (216), Expect = 3e-18
 Identities = 98/612 (16%), Positives = 189/612 (30%), Gaps = 209/612 (34%)

Query: 7   QDCLDIYRRKVERTRKYKADLH-QSLADAEAEIACLVSALGEHASFSRGKGTLKQQISAI 65
           +D L ++         +  +   + + D    I  L     +H   S      K  +S  
Sbjct: 19  KDILSVFEDA------FVDNFDCKDVQDMPKSI--LSKEEIDHIIMS------KDAVSGT 64

Query: 66  RSILEDLRSKKEQRIKEF--SGIQ----FQIAQISSEIAGNGQSINSVDAQVDEC----- 114
             +   L SK+E+ +++F    ++    F ++ I +E             Q D       
Sbjct: 65  LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124

Query: 115 ---DLTV---KKLGELKTHLRELQNEKNL---------------------RLQKVNN--- 144
                 V   +   +L+  L EL+  KN+                     ++Q   +   
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI 184

Query: 145 ---NLSTIHELSLVLSI--NFLETVNEVHPSLSDSKNVQSKSISNDTIARLTGVIHLLKQ 199
              NL   +    VL +    L  ++    S SD     S +I           IH ++ 
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD----HSSNIKLR--------IHSIQA 232

Query: 200 EKQQRLQKLQSLGNALIKL---WD-------------LLETPVNEQRKVDHVTSLVSSSV 243
           E + RL K +   N L+ L    +             LL T     R       L +++ 
Sbjct: 233 ELR-RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT-----RFKQVTDFLSAATT 286

Query: 244 DEVSM-------------------LGC--------------LALDVI-EQMEVEVEHLNE 269
             +S+                   L C                L +I E +   +   + 
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346

Query: 270 YKASKMKELVFKRQ--------HELEEIY-------KGVHM----------DVDSDAARQ 304
           +K     +L    +         E  +++          H+          DV       
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMV 406

Query: 305 IL-----ISLIDSGNVD----LSDLLSSMDDQIAKAKEEALSRKDILDK---VEKWKHGA 352
           ++      SL++    +    +  +   ++ ++    E AL R  I+D     + +    
Sbjct: 407 VVNKLHKYSLVEKQPKESTISIPSIY--LELKVKLENEYALHRS-IVDHYNIPKTFDSDD 463

Query: 353 EEEQWLDDYEKDENRYS-AGRGAH-KNLKRAEKA----------RILISKL--------- 391
               +LD Y      YS  G   H KN++  E+           R L  K+         
Sbjct: 464 LIPPYLDQY-----FYSHIGH--HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA 516

Query: 392 PSVVENLIAKVKAWEAEKRIPFLYDKVP----LLSILEEYTAQCQKREEEKRRCREQKRL 447
              + N + ++K ++     P++ D  P    L++ + ++  +    EE     +    L
Sbjct: 517 SGSILNTLQQLKFYK-----PYICDNDPKYERLVNAILDFLPKI---EENLICSKYTDLL 568

Query: 448 QEQFAAEQEAIY 459
           +    AE EAI+
Sbjct: 569 RIALMAEDEAIF 580

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	527
3nrx_A	130	Protein regulator of cytokinesis 1; spectrin fold,	100.0

>3nrx_A Protein regulator of cytokinesis 1; spectrin fold, microtubule binding domain, protein binding; 1.75A {Homo sapiens} PDB: 3nry_A

Probab=100.00  E-value=3.7e-39  Score=285.23  Aligned_cols=126  Identities=29%  Similarity=0.480  Sum_probs=116.5

Q ss_pred             HHHHHHHHhhhHHHHHHHHHHHhhHHHHHHHHhcCCccccccCCCChhhhHHHHHHHHHhcc-chHHHHHHHHHHHHHHH
Q 009740          329 AKAKEEALSRKDILDKVEKWKHGAEEEQWLDDYEKDENRYSAGRGAHKNLKRAEKARILISK-LPSVVENLIAKVKAWEA  407 (527)
Q Consensus       329 ~~lke~~~~~k~Il~~vekw~~l~~e~~~Le~~~~D~~R~~~~RG~h~~LlreEK~Rk~v~K-lP~l~~~L~~~l~~wE~  407 (527)
                      ++|+++|.++++||++|++|..+|.+...||+|++|||||+ +|||  +|++|||+|++|+| ||+|++.|+++|.+||.
T Consensus         3 ~rLk~~y~~~k~Ile~vekweelw~~~~eLE~~~~D~sR~~-~Rgg--~LlreEK~Rk~i~k~lP~l~~~L~~~i~~wE~   79 (130)
T 3nrx_A            3 AALKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRFT-NRGG--NLLKEEKQRAKLQKMLPKLEEELKARIELWEQ   79 (130)
T ss_dssp             CHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHcCChhhhh-ccch--hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999 8999  99999999999999 99999999999999999


Q ss_pred             HcCCceEECCccHHHHH-HHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhccCC
Q 009740          408 EKRIPFLYDKVPLLSIL-EEYTAQCQKREEEKRRCREQKRLQEQFAAEQEAIYGS  461 (527)
Q Consensus       408 e~g~~Fl~dG~~ll~~l-ee~~~~~~eKe~ek~~~r~~kk~~~q~~~e~e~~~gs  461 (527)
                      ++|.||+|||++|+++| ++|+.+|++||+||++ |++||.   +++|+||+|||
T Consensus        80 e~g~~Flv~G~~~le~l~eqw~~~r~~KE~eK~~-R~~kk~---~~~e~e~~~gs  130 (130)
T 3nrx_A           80 EHSKAFMVNGQKFMEYVAEQWEMHRLEKERAKQE-RQLKNK---KQTETEMLYGS  130 (130)
T ss_dssp             HHTSCCEETTEEHHHHHHHHHHHHHHHHHHHHHH-HHHHHH---HHHHHHHHHCC
T ss_pred             HcCCeeeEcCccHHHHHHHHHHHHHHHHHHHHHH-HHHHHH---HHHHHHhccCC
Confidence            99999999999999999 5799999999999999 999987   45899999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00