Citrus Sinensis ID: 009745

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------
MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEAQEILKGTQKQEKNELLFQQFGVNYKKLPEMFRQGSCVFKTEMEDIVKYNENGAPVKRLRRKARIVHSENIAGKSFWNGHSCLLKELGRFDEDVGKIKPDYVRSFVFENKLIPSTWIVIRIDGCHFHRFSEVHEFDKPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASENKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEEPPL
cccccHHHHHccccccccccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHccccccccccHHccEEEEEEEEEccccccccccccEEEEEEEEEEEEEccccccccccccEEEEcccccccccccccccEEEEEEEccccccccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHccccccccccccccEEEEEEccccccccccccccEEEEEEEEEEEEccccccccccccccccccccc
ccccHHHHHHHcccccccccccEEEEEEcccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccHHHHHHHHHHccccccccHHHHcccEEEEEEEEcEEcccccccccEEEEEEEEEEEEccccccHHHHHHcHHHHHHHHccHHHHHHcHHHHHHHHccccccccccEEEEEEcccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccHcHHHHHHHHccccccccHHHHcccEEEEEEEEcccccccccccccccccEEEEEHHHHccHHHHHHcHHHHcccccc
MANSKYEYVKSFevedeifspnllVVRIhgrdfqrfshdhgfekpnderALNLMNTCAVAVLeeypdivfsygysdeysFVFKRTSKFYQRRASKILSLIVSFFTSVYVTkwkeffplkefryppsfhsrviSCASIEVLQQYLAWRqndchvnnqYETCLWMLIKHGKSENEAQEILKGTQKQEKNELLFQQFGVNYKKLPEMFRQGSCVFKTEMEDIVKynengapvkrLRRKARIVhseniagksfwNGHSCLLKElgrfdedvgkikpdyvRSFVFEnklipstwiVIRIDgchfhrfsevhefdkpndeQALNLMNSCAVAVLEEFEDitfaygvsdeYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWkeffpqkklnyppsfdgravcypssdiIRDYLAWRQVDCHINNQYNTCFWMLVKsgkskseaqgclkgTQAREKNELLIQKFgidysklplmfrqgsSIFRARTEKSVASENKSSVEKVWNKVLVSHCniiepsfwmahpsilneeppl
MANSKYEYVKSfevedeifspNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEAQEILKGTQKQEKNELLFQQFGVNYKKLPEMFRQGSCVFKTEMEDIVKynengapvkrlrRKARIVhseniagksfwngHSCLLKELGRFDEDVGKIKPDYVRSFVFENKLIPSTWIVIRIDGCHFHRFSEVHEFDKPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTeksvasenkssvekvWNKVLVSHCNIIepsfwmahpsilneeppl
MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEAQEILKGTQKQEKNELLFQQFGVNYKKLPEMFRQGSCVFKTEMEDIVKYNENGAPVKRLRRKARIVHSENIAGKSFWNGHSCLLKELGRFDEDVGKIKPDYVRSFVFENKLIPSTWIVIRIDGCHFHRFSEVHEFDKPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASENKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEEPPL
******EYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHG*******************ELLFQQFGVNYKKLPEMFRQGSCVFKTEMEDIVKYNENGAPVKRLRRKARIVHSENIAGKSFWNGHSCLLKELGRFDEDVGKIKPDYVRSFVFENKLIPSTWIVIRIDGCHFHRFSEVHEFDKPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVK********************NELLIQKFGIDYSKLPLMFRQGSSIF***************VEKVWNKVLVSHCNIIEPSFWMAHP*********
***SKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEA*******QKQEKNELLFQQFGVNYKKLPEMFRQGSCVFKTEM******************KARIVHSENIAGKSFWNGHSCLLKELGRFDEDVGKIKPDYVRSFVFENKLIPSTWIVIRIDGCHFHRFSEVHEFDKPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRA********************VLVSHCNIIEPSFWMAHPSILNEEPP*
MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEAQEILKGTQKQEKNELLFQQFGVNYKKLPEMFRQGSCVFKTEMEDIVKYNENGAPVKRLRRKARIVHSENIAGKSFWNGHSCLLKELGRFDEDVGKIKPDYVRSFVFENKLIPSTWIVIRIDGCHFHRFSEVHEFDKPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSG*********LKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRAR************VEKVWNKVLVSHCNIIEPSFWMAHPSILNEEPPL
***SKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEAQEILKGTQKQEKNELLFQQFGVNYKKLPEMFRQGSCVFKTEMEDIVKYNENGAPVKRLRRKARIVHSENIAGKSFWNGHSCLLKELGRFDEDVGKIKPDYVRSFVFENKLIPSTWIVIRIDGCHFHRFSEVHEFDKPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKS***********VWNKVLVSHCNIIEPSFWMAHPSILNEE***
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MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEAQEILKGTQKQEKNELLFQQFGVNYKKLPEMFRQGSCVFKTEMEDIVKYNENGAPVKRLRRKARIVHSENIAGKSFWNGHSCLLKELGRFDEDVGKIKPDYVRSFVFENKLIPSTWIVIRIDGCHFHRFSEVHEFDKPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASENKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEEPPL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query527 2.2.26 [Sep-21-2011]
F4ISV6537 tRNA(His) guanylyltransfe yes no 0.990 0.972 0.697 0.0
F4IRQ5567 tRNA(His) guanylyltransfe no no 0.982 0.913 0.710 0.0
Q05B50298 Probable tRNA(His) guanyl yes no 0.514 0.909 0.451 2e-68
Q9CY52298 Probable tRNA(His) guanyl yes no 0.525 0.929 0.432 4e-68
Q9NWX6298 Probable tRNA(His) guanyl yes no 0.514 0.909 0.437 3e-66
Q5M965298 Probable tRNA(His) guanyl yes no 0.514 0.909 0.427 2e-65
Q9V3N8286 Probable tRNA(His) guanyl yes no 0.462 0.853 0.447 6e-63
Q54E29256 Probable tRNA(His) guanyl yes no 0.468 0.964 0.478 7e-62
Q7SDM8293 tRNA(His) guanylyltransfe N/A no 0.480 0.863 0.446 8e-60
Q9Y7T3261 tRNA(His) guanylyltransfe yes no 0.476 0.961 0.454 3e-58
>sp|F4ISV6|THG2_ARATH tRNA(His) guanylyltransferase 2 OS=Arabidopsis thaliana GN=THG2 PE=1 SV=1 Back     alignment and function desciption
 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/535 (69%), Positives = 451/535 (84%), Gaps = 13/535 (2%)

Query: 1   MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVA 60
           MANSKYEYVKSFEVEDE+  PNL+++RI GRDF RFS  H FEKPNDE +LNLMN+CA +
Sbjct: 1   MANSKYEYVKSFEVEDEVMFPNLIIIRIDGRDFSRFSQVHKFEKPNDETSLNLMNSCASS 60

Query: 61  VLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKE 120
           VL EYPDIVF+YGYSDEYSFVFK+ S+FYQRRASKILSL+ SFF +VYVTKWKEFFP  +
Sbjct: 61  VLVEYPDIVFAYGYSDEYSFVFKKASRFYQRRASKILSLVASFFAAVYVTKWKEFFPHTK 120

Query: 121 FRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEAQEILKG 180
             Y PSF S+V+SCAS+EVLQ YLAWRQ+DCH++NQY+TCLWML+K GK+ +E QEILK 
Sbjct: 121 LEYAPSFASKVVSCASVEVLQAYLAWRQHDCHISNQYDTCLWMLVKSGKTLSETQEILKD 180

Query: 181 TQKQEKNELLFQQFGVNYKKLPEMFRQGSCVFKTE------------MEDIVKYNENGAP 228
           TQKQ++NELLFQQFG+NYK LP +FRQGSC+FKT+            +E+ VK++ENG P
Sbjct: 181 TQKQQRNELLFQQFGINYKMLPVLFRQGSCLFKTKVIFSIISFFYFLLEETVKHDENGKP 240

Query: 229 VKRLRRKARIVHSENIAGKSFWNGHSCLLKELGRFDEDVGKIKPDYVRSFVFENKLIPST 288
           VKRLRR+  +VHSEN+AG+SFWN HS L K+LG F +D+GKI+PDYV+SF FE++L+P T
Sbjct: 241 VKRLRRRETLVHSENVAGRSFWNEHSSLHKDLGHFAKDIGKIEPDYVKSFQFESRLLPLT 300

Query: 289 WIVIRIDGCHFHRFSEVHEFDKPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVL 348
           W+V+RIDGCHFHRFSEVHEF+KPNDEQAL LMNSCAVAVLEEF+DI FAYGVSDE+SFVL
Sbjct: 301 WVVVRIDGCHFHRFSEVHEFEKPNDEQALKLMNSCAVAVLEEFQDIAFAYGVSDEFSFVL 360

Query: 349 KNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRD 408
           KN S  Y+RQ+S+I+S +VSFFTS Y+++W +FFP KKL YPPSFDGRAVCYP+SDI+ D
Sbjct: 361 KNKSELYKRQSSKIISAVVSFFTSTYMMRWGDFFPHKKLKYPPSFDGRAVCYPTSDILLD 420

Query: 409 YLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLP 468
           YLAWRQVDCHINNQYNTCFWMLVKSGKSK +AQ  LKGTQ REKNELL Q+FGI+Y+ LP
Sbjct: 421 YLAWRQVDCHINNQYNTCFWMLVKSGKSKIQAQDYLKGTQTREKNELLSQQFGIEYNSLP 480

Query: 469 LMFRQGSSIFRARTEKSVASEN-KSSVEKVWNKVLVSHCNIIEPSFWMAHPSILN 522
           ++FR GSS+FR +T++ V  EN + S ++V  +V V + NII+  FW  HP IL+
Sbjct: 481 VIFRMGSSVFRLKTQEGVTEENGEVSGKQVEAEVGVDYSNIIDQCFWQQHPHILS 535
Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 7EC: 9
>sp|F4IRQ5|THG1_ARATH tRNA(His) guanylyltransferase 1 OS=Arabidopsis thaliana GN=THG1 PE=1 SV=1 Back     alignment and function description
>sp|Q05B50|THG1_BOVIN Probable tRNA(His) guanylyltransferase OS=Bos taurus GN=THG1L PE=2 SV=1 Back     alignment and function description
>sp|Q9CY52|THG1_MOUSE Probable tRNA(His) guanylyltransferase OS=Mus musculus GN=Thg1l PE=1 SV=1 Back     alignment and function description
>sp|Q9NWX6|THG1_HUMAN Probable tRNA(His) guanylyltransferase OS=Homo sapiens GN=THG1L PE=1 SV=2 Back     alignment and function description
>sp|Q5M965|THG1_RAT Probable tRNA(His) guanylyltransferase OS=Rattus norvegicus GN=Thg1l PE=2 SV=1 Back     alignment and function description
>sp|Q9V3N8|THG1_DROME Probable tRNA(His) guanylyltransferase OS=Drosophila melanogaster GN=l(2)35Bc PE=2 SV=1 Back     alignment and function description
>sp|Q54E29|THG1_DICDI Probable tRNA(His) guanylyltransferase OS=Dictyostelium discoideum GN=thg1 PE=3 SV=1 Back     alignment and function description
>sp|Q7SDM8|THG1_NEUCR tRNA(His) guanylyltransferase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=thg-1 PE=3 SV=1 Back     alignment and function description
>sp|Q9Y7T3|THG1_SCHPO tRNA(His) guanylyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thg1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query527
296082524 1073 unnamed protein product [Vitis vinifera] 0.992 0.487 0.775 0.0
359480859562 PREDICTED: uncharacterized protein LOC10 0.996 0.934 0.772 0.0
297789848525 hypothetical protein ARALYDRAFT_920213 [ 0.990 0.994 0.726 0.0
147819926530 hypothetical protein VITISV_031884 [Viti 0.903 0.898 0.794 0.0
186504734525 tRNAHis guanylyltransferase [Arabidopsis 0.990 0.994 0.713 0.0
238479418532 tRNAHis guanylyltransferase [Arabidopsis 0.990 0.981 0.703 0.0
238479416537 tRNAHis guanylyltransferase [Arabidopsis 0.990 0.972 0.697 0.0
42569521567 tRNAHis guanylyltransferase [Arabidopsis 0.982 0.913 0.710 0.0
297826599520 hypothetical protein ARALYDRAFT_344921 [ 0.982 0.996 0.701 0.0
224065048482 predicted protein [Populus trichocarpa] 0.908 0.993 0.762 0.0
>gi|296082524|emb|CBI21529.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  868 bits (2244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/525 (77%), Positives = 458/525 (87%)

Query: 1   MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVA 60
           MANSKYEYVKSFEVEDE+  PNL+VVRI GR F+RFS  H FEKPNDERALNLMN+CA A
Sbjct: 461 MANSKYEYVKSFEVEDEVMPPNLIVVRIDGRGFRRFSEVHEFEKPNDERALNLMNSCAAA 520

Query: 61  VLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKE 120
           +LEEYPDIVFSYG+SDEYSFVFK+T+KFYQRRASKI+SL+VSFFTS+Y TKWKEFFP KE
Sbjct: 521 MLEEYPDIVFSYGFSDEYSFVFKKTTKFYQRRASKIVSLVVSFFTSIYTTKWKEFFPHKE 580

Query: 121 FRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEAQEILKG 180
            RYPPSF + VI CAS+EVLQ YLAWRQNDCH+NNQY TC WML+K GK+E EAQE+LKG
Sbjct: 581 LRYPPSFRAWVICCASMEVLQTYLAWRQNDCHINNQYNTCFWMLVKCGKTEEEAQEVLKG 640

Query: 181 TQKQEKNELLFQQFGVNYKKLPEMFRQGSCVFKTEMEDIVKYNENGAPVKRLRRKARIVH 240
           T KQEKNELLFQQFG+NYK LP MFRQGSCV KT++E IVKY+ENG PVKRLRRK  IVH
Sbjct: 641 THKQEKNELLFQQFGINYKNLPSMFRQGSCVCKTQVEAIVKYSENGTPVKRLRRKPIIVH 700

Query: 241 SENIAGKSFWNGHSCLLKELGRFDEDVGKIKPDYVRSFVFENKLIPSTWIVIRIDGCHFH 300
           S+NIA +SFWN H  LLKELG F ED+  IKP+YV+SF FENKL+P TWIV+RIDGCHFH
Sbjct: 701 SDNIAARSFWNEHPFLLKELGDFREDINNIKPEYVKSFQFENKLMPLTWIVVRIDGCHFH 760

Query: 301 RFSEVHEFDKPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQAS 360
           RFSEVHEF+KPNDEQALNLMNSCAVAVLE+F+D+ F+YGVSDEYSFVLK  S FYQR+ S
Sbjct: 761 RFSEVHEFEKPNDEQALNLMNSCAVAVLEQFKDVIFSYGVSDEYSFVLKKDSQFYQRRGS 820

Query: 361 EIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHIN 420
           EIV+ +VS+FTS+YV+KWKEFFPQK+L YPP FDGRAV YP+S+I+RDYL WRQVDCHIN
Sbjct: 821 EIVTALVSYFTSIYVMKWKEFFPQKELKYPPCFDGRAVLYPTSEILRDYLTWRQVDCHIN 880

Query: 421 NQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRA 480
           NQYNTCFWMLVKSGKSKSEAQ  LKGTQAREKNE+L+Q+FGIDY+ LPLMFRQGSS F  
Sbjct: 881 NQYNTCFWMLVKSGKSKSEAQAYLKGTQAREKNEVLLQQFGIDYNTLPLMFRQGSSAFWN 940

Query: 481 RTEKSVASENKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEEP 525
             EK+   EN +S EK   KV+V  CNIIE SFW AHPSILNE+P
Sbjct: 941 EEEKTGMYENGASAEKSGKKVVVEQCNIIEQSFWEAHPSILNEKP 985

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359480859|ref|XP_002275722.2| PREDICTED: uncharacterized protein LOC100264494 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297789848|ref|XP_002862851.1| hypothetical protein ARALYDRAFT_920213 [Arabidopsis lyrata subsp. lyrata] gi|297308599|gb|EFH39109.1| hypothetical protein ARALYDRAFT_920213 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|147819926|emb|CAN62815.1| hypothetical protein VITISV_031884 [Vitis vinifera] Back     alignment and taxonomy information
>gi|186504734|ref|NP_180791.3| tRNAHis guanylyltransferase [Arabidopsis thaliana] gi|330253574|gb|AEC08668.1| tRNAHis guanylyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|238479418|ref|NP_001154545.1| tRNAHis guanylyltransferase [Arabidopsis thaliana] gi|330253576|gb|AEC08670.1| tRNAHis guanylyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|238479416|ref|NP_001154544.1| tRNAHis guanylyltransferase [Arabidopsis thaliana] gi|426021263|sp|F4ISV6.1|THG2_ARATH RecName: Full=tRNA(His) guanylyltransferase 2 gi|330253575|gb|AEC08669.1| tRNAHis guanylyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42569521|ref|NP_565727.2| tRNAHis guanylyltransferase [Arabidopsis thaliana] gi|426021251|sp|F4IRQ5.1|THG1_ARATH RecName: Full=tRNA(His) guanylyltransferase 1 gi|330253469|gb|AEC08563.1| tRNAHis guanylyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297826599|ref|XP_002881182.1| hypothetical protein ARALYDRAFT_344921 [Arabidopsis lyrata subsp. lyrata] gi|297327021|gb|EFH57441.1| hypothetical protein ARALYDRAFT_344921 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224065048|ref|XP_002301645.1| predicted protein [Populus trichocarpa] gi|222843371|gb|EEE80918.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query527
TAIR|locus:2062611537 AT2G32320 [Arabidopsis thalian 0.990 0.972 0.697 2.6e-212
TAIR|locus:2065934567 AT2G31580 [Arabidopsis thalian 0.982 0.913 0.710 7e-212
UNIPROTKB|Q5ZIR4269 THG1L "Uncharacterized protein 0.489 0.959 0.485 1.2e-65
UNIPROTKB|Q05B50298 THG1L "Probable tRNA(His) guan 0.514 0.909 0.451 4.1e-65
MGI|MGI:1913878298 Thg1l "tRNA-histidine guanylyl 0.514 0.909 0.441 4.7e-64
DICTYBASE|DDB_G0291830256 thg1 "tRNA-histidine guanylylt 0.468 0.964 0.478 4.2e-63
UNIPROTKB|E2RA61298 THG1L "Uncharacterized protein 0.538 0.953 0.425 5.4e-63
UNIPROTKB|Q9NWX6298 THG1L "Probable tRNA(His) guan 0.512 0.906 0.443 5.4e-63
RGD|1359513298 Thg1l "tRNA-histidine guanylyl 0.514 0.909 0.434 2.3e-62
UNIPROTKB|Q7SDM8293 thg-1 "tRNA(His) guanylyltrans 0.396 0.713 0.523 3.3e-61
TAIR|locus:2062611 AT2G32320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2052 (727.4 bits), Expect = 2.6e-212, P = 2.6e-212
 Identities = 373/535 (69%), Positives = 451/535 (84%)

Query:     1 MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVA 60
             MANSKYEYVKSFEVEDE+  PNL+++RI GRDF RFS  H FEKPNDE +LNLMN+CA +
Sbjct:     1 MANSKYEYVKSFEVEDEVMFPNLIIIRIDGRDFSRFSQVHKFEKPNDETSLNLMNSCASS 60

Query:    61 VLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKE 120
             VL EYPDIVF+YGYSDEYSFVFK+ S+FYQRRASKILSL+ SFF +VYVTKWKEFFP  +
Sbjct:    61 VLVEYPDIVFAYGYSDEYSFVFKKASRFYQRRASKILSLVASFFAAVYVTKWKEFFPHTK 120

Query:   121 FRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEAQEILKG 180
               Y PSF S+V+SCAS+EVLQ YLAWRQ+DCH++NQY+TCLWML+K GK+ +E QEILK 
Sbjct:   121 LEYAPSFASKVVSCASVEVLQAYLAWRQHDCHISNQYDTCLWMLVKSGKTLSETQEILKD 180

Query:   181 TQKQEKNELLFQQFGVNYKKLPEMFRQGSCVFKTE------------MEDIVKYNENGAP 228
             TQKQ++NELLFQQFG+NYK LP +FRQGSC+FKT+            +E+ VK++ENG P
Sbjct:   181 TQKQQRNELLFQQFGINYKMLPVLFRQGSCLFKTKVIFSIISFFYFLLEETVKHDENGKP 240

Query:   229 VKRLRRKARIVHSENIAGKSFWNGHSCLLKELGRFDEDVGKIKPDYVRSFVFENKLIPST 288
             VKRLRR+  +VHSEN+AG+SFWN HS L K+LG F +D+GKI+PDYV+SF FE++L+P T
Sbjct:   241 VKRLRRRETLVHSENVAGRSFWNEHSSLHKDLGHFAKDIGKIEPDYVKSFQFESRLLPLT 300

Query:   289 WIVIRIDGCHFHRFSEVHEFDKPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVL 348
             W+V+RIDGCHFHRFSEVHEF+KPNDEQAL LMNSCAVAVLEEF+DI FAYGVSDE+SFVL
Sbjct:   301 WVVVRIDGCHFHRFSEVHEFEKPNDEQALKLMNSCAVAVLEEFQDIAFAYGVSDEFSFVL 360

Query:   349 KNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRD 408
             KN S  Y+RQ+S+I+S +VSFFTS Y+++W +FFP KKL YPPSFDGRAVCYP+SDI+ D
Sbjct:   361 KNKSELYKRQSSKIISAVVSFFTSTYMMRWGDFFPHKKLKYPPSFDGRAVCYPTSDILLD 420

Query:   409 YLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLP 468
             YLAWRQVDCHINNQYNTCFWMLVKSGKSK +AQ  LKGTQ REKNELL Q+FGI+Y+ LP
Sbjct:   421 YLAWRQVDCHINNQYNTCFWMLVKSGKSKIQAQDYLKGTQTREKNELLSQQFGIEYNSLP 480

Query:   469 LMFRQGSSIFRARTEKSVASEN-KSSVEKVWNKVLVSHCNIIEPSFWMAHPSILN 522
             ++FR GSS+FR +T++ V  EN + S ++V  +V V + NII+  FW  HP IL+
Sbjct:   481 VIFRMGSSVFRLKTQEGVTEENGEVSGKQVEAEVGVDYSNIIDQCFWQQHPHILS 535
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006400 "tRNA modification" evidence=IEA
GO:0008193 "tRNA guanylyltransferase activity" evidence=IEA
TAIR|locus:2065934 AT2G31580 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZIR4 THG1L "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q05B50 THG1L "Probable tRNA(His) guanylyltransferase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1913878 Thg1l "tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0291830 thg1 "tRNA-histidine guanylyltransferase 1" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|E2RA61 THG1L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NWX6 THG1L "Probable tRNA(His) guanylyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1359513 Thg1l "tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q7SDM8 thg-1 "tRNA(His) guanylyltransferase" [Neurospora crassa OR74A (taxid:367110)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
F4ISV6THG2_ARATH2, ., 7, ., 7, ., 7, 90.69710.99050.9720yesno
F4IRQ5THG1_ARATH2, ., 7, ., 7, ., 7, 90.71070.98290.9135nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.7LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query527
COG4021249 COG4021, COG4021, Uncharacterized conserved protei 2e-69
COG4021249 COG4021, COG4021, Uncharacterized conserved protei 8e-66
pfam04446131 pfam04446, Thg1, tRNAHis guanylyltransferase 5e-65
pfam04446131 pfam04446, Thg1, tRNAHis guanylyltransferase 2e-55
pfam14413120 pfam14413, Thg1C, Thg1 C terminal domain 5e-42
pfam14413120 pfam14413, Thg1C, Thg1 C terminal domain 1e-37
cd08767126 cd08767, Cdt1_c, The C-terminal fold of replicatio 0.002
>gnl|CDD|226508 COG4021, COG4021, Uncharacterized conserved protein [Function unknown] Back     alignment and domain information 
 Score =  222 bits (568), Expect = 2e-69
 Identities = 93/247 (37%), Positives = 145/247 (58%), Gaps = 6/247 (2%)

Query: 274 YVRSFVFENKLIPSTWIVIRIDGCHFHRFSEVHEFDKPNDEQALNLMNSCAVA-VLEEFE 332
           YVR     ++++P T+IV+RIDG  FH+F++  +F+KP DE+ L LMN+ A   VL+   
Sbjct: 7   YVREVYAHDRILPQTYIVLRIDGRGFHKFTKFLDFEKPYDERFLKLMNATAKNLVLKYGL 66

Query: 333 DITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPS 392
           DI  AY  SDE SF+LK++++ +  +  ++ SV  SFFTS +   W +FFP+K     PS
Sbjct: 67  DIILAYTFSDEISFLLKSSTVPFNGRVEKLDSVFASFFTSAFTRLWAKFFPEKH---LPS 123

Query: 393 FDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREK 452
           FD R V YP  D I DY  WRQV+   NN Y+T FW L+  G +  EA+  L+GT++ EK
Sbjct: 124 FDSRCVAYPL-DTIPDYFHWRQVEAWRNNLYSTTFWQLIIRGLTPQEAEERLRGTKSNEK 182

Query: 453 NELLIQKFGIDYSKLPLMFRQGSSIFRART-EKSVASENKSSVEKVWNKVLVSHCNIIEP 511
           +E+L  +FGI+Y++ P   ++G  ++R      +   + +S V +    + ++    I+ 
Sbjct: 183 HEILFSEFGINYNREPEWQKKGVGVYRVPVRGWNPIRDEESLVTRKGEILHINVIAQIDE 242

Query: 512 SFWMAHP 518
            F     
Sbjct: 243 LFEGYMR 249

Length = 249
>gnl|CDD|226508 COG4021, COG4021, Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>gnl|CDD|203016 pfam04446, Thg1, tRNAHis guanylyltransferase Back     alignment and domain information
>gnl|CDD|203016 pfam04446, Thg1, tRNAHis guanylyltransferase Back     alignment and domain information
>gnl|CDD|222741 pfam14413, Thg1C, Thg1 C terminal domain Back     alignment and domain information
>gnl|CDD|222741 pfam14413, Thg1C, Thg1 C terminal domain Back     alignment and domain information
>gnl|CDD|176572 cd08767, Cdt1_c, The C-terminal fold of replication licensing factor Cdt1 is essential for Cdt1 activity and directly interacts with MCM2-7 helicase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 527
KOG2721260 consensus Uncharacterized conserved protein [Funct 100.0
KOG2721260 consensus Uncharacterized conserved protein [Funct 100.0
COG4021249 Uncharacterized conserved protein [Function unknow 100.0
COG4021249 Uncharacterized conserved protein [Function unknow 100.0
PF04446135 Thg1: tRNAHis guanylyltransferase; InterPro: IPR00 100.0
PF04446135 Thg1: tRNAHis guanylyltransferase; InterPro: IPR00 100.0
PF14413120 Thg1C: Thg1 C terminal domain; PDB: 3OTE_A 3OTC_A 100.0
PF14413120 Thg1C: Thg1 C terminal domain; PDB: 3OTE_A 3OTC_A 100.0
>KOG2721 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information 
Probab=100.00  E-value=4.4e-92  Score=673.75  Aligned_cols=252  Identities=60%  Similarity=1.044  Sum_probs=234.3

Q ss_pred             chhhccccccccCCCCeEEEEEeCCCcccccccCCCCCCChHHHHHHHHHHHHHHHHhCCCeEEEEeccceeEEEeecCc
Q 009745            7 EYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTS   86 (527)
Q Consensus         7 eyvk~fE~~~~l~p~~~ivVRlDGr~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~~~~~aY~~SDEiSfvf~~~~   86 (527)
                      ||||+||.+|.++|+||||||||||+|||||+.|+|+||||++++++||+||.+||++++||++|||+||||||||++++
T Consensus         1 eYVksFE~~d~~lp~~~iVvRIDGr~FhrFs~~h~FeKPNDe~aLnLMnscA~~Vl~ef~DIv~AyG~SDEYSFV~kk~t   80 (260)
T KOG2721|consen    1 EYVKSFEVEDEVLPPCWIVVRIDGRDFHRFSKVHEFEKPNDETALNLMNSCASAVLEEFPDIVFAYGYSDEYSFVFKKST   80 (260)
T ss_pred             CchhhhhcccccccceEEEEEEcCcchhhhhhhhcccCCChHHHHHHHHHHHHHHHHhccceEEEeccCcceeeeeccch
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhhhhHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcceeeeecCCHHHHHHHHHHHhhHHHHhhhhhHHHHHHHH
Q 009745           87 KFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIK  166 (527)
Q Consensus        87 ~~f~rR~~KL~S~~aS~~Ss~f~~~~~~~fp~~~L~~pp~FD~Rvv~~Ps~~~v~dYl~WRQ~D~hrNnl~n~~fw~Lv~  166 (527)
                      .+|+||.+||+|++||+|||+|++.|+++||+.+|.+||+||||||+||+.+.++|||+|||+|||+||||||||||||+
T Consensus        81 ~~fkRr~sKi~s~v~SfF~s~YV~~W~~ffp~~~L~y~PsFdgrvV~yps~q~LkdYLaWRq~DcHinNlYnT~fWmLv~  160 (260)
T KOG2721|consen   81 ELFKRRASKILSLVASFFASVYVTKWKKFFPHLKLLYAPSFDGRVVSYPSVQVLKDYLAWRQVDCHINNLYNTCFWMLVK  160 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCCCcEEecccHHHHHHHHHHHhhcccccchhhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999995


Q ss_pred             -cCCCHHHHHHHhcCCChhHHHHHHHHhhCCCCCCCcccccCCeEEEEeeeec-cccc--cCCCC--ccceeeeeeeEee
Q 009745          167 -HGKSENEAQEILKGTQKQEKNELLFQQFGVNYKKLPEMFRQGSCVFKTEMED-IVKY--NENGA--PVKRLRRKARIVH  240 (527)
Q Consensus       167 -~g~s~~eA~~~L~G~~~~dknElLf~~~GINyn~~P~~~rkGs~i~r~~~~~-~~~~--~~~g~--~~~~~r~k~~~~~  240 (527)
                       +|+|+.||+++|+||.+++||||||++||||||++|++||+||++.|+++.. .-+.  ...|.  .++..|.+++ +.
T Consensus       161 ksG~t~~qaq~~Lkgt~s~ekneilf~efginyn~~p~~~rkGs~l~rk~v~~~~~k~~~~~~~k~~~~~~~~~k~l-p~  239 (260)
T KOG2721|consen  161 KSGKTPSQAQEILKGTFSAEKNEILFSEFGINYNNEPEMFRKGSILIRKKVKGQEWKINTEIQGKKLFVTYTRTKPL-PL  239 (260)
T ss_pred             HhCCChHHHHHHHHhhhhhhhhhHHHHHhCcccCCchHHHhcccEEEEecCCcceeeechhcccceeeeeeccCcce-eE
Confidence             9999999999999999999999999999999999999999999999998731 1111  11233  3344455544 69


Q ss_pred             ccCcccccccccchhhHhh
Q 009745          241 SENIAGKSFWNGHSCLLKE  259 (527)
Q Consensus       241 ~~dii~d~fW~~~~~ll~~  259 (527)
                      |+|||||+||.+||.+|..
T Consensus       240 ~~~~i~d~f~~~~p~~~~~  258 (260)
T KOG2721|consen  240 HVDIIGDDFWKEHPEILDE  258 (260)
T ss_pred             EEEEecCcccccCchhhcc
Confidence            9999999999999999865

>KOG2721 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>COG4021 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>COG4021 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [] Back     alignment and domain information
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [] Back     alignment and domain information
>PF14413 Thg1C: Thg1 C terminal domain; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A Back     alignment and domain information
>PF14413 Thg1C: Thg1 C terminal domain; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query527
3otb_A269 Crystal Structure Of Human Trnahis Guanylyltransfer 1e-66
>pdb|3OTB|A Chain A, Crystal Structure Of Human Trnahis Guanylyltransferase (Thg1) - Dgtp Complex Length = 269 Back     alignment and structure 
Iteration: 1

 Score =  250 bits (638), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 120/268 (44%), Positives = 173/268 (64%), Gaps = 10/268 (3%)
Query: 267 VGKIKPDYVRSFVFENKLIPSTWIVIRIDGCHFHRFSEVHEFDKPNDEQALNLMNSCAVA 326
           + K K +YVR F  ++  +   W+V+R+DG +FHRF+E H F KPND +AL LM  CA  
Sbjct: 1   MAKSKFEYVRDFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALQLMTKCAQT 60
Query: 327 VLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKK 386
           V+EE EDI  AYG SDEYSFV K  + +++R+AS+ ++ + S F S YV  W+++F  + 
Sbjct: 61  VMEELEDIVIAYGQSDEYSFVFKRKTNWFKRRASKFMTHVASQFASSYVFYWRDYFEDQP 120
Query: 387 LNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLV-KSGKSKSEAQGCLK 445
           L YPP FDGR V YPS+  ++DYL+WRQ DCHINN YNT FW L+ +SG +  +AQG L+
Sbjct: 121 LLYPPGFDGRVVVYPSNQTLKDYLSWRQADCHINNLYNTVFWALIQQSGLTPVQAQGRLQ 180
Query: 446 GTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASENKSSVEKVWNKVLVS- 504
           GT A +KNE+L  +F I+Y+    M+R+G+ +   + ++ +  E K   E    K+ V+ 
Sbjct: 181 GTLAADKNEILFSEFNINYNNELPMYRKGTVLIWQKVDEVMTKEIKLPTEMEGKKMAVTR 240
Query: 505 --------HCNIIEPSFWMAHPSILNEE 524
                   HC+II  +FW  HP IL+E+
Sbjct: 241 TRTKPVPLHCDIIGDAFWKEHPEILDED 268

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query527
3otd_A269 TRNA(His) guanylyltransferase; polymerase-like PAL 1e-103
3otd_A269 TRNA(His) guanylyltransferase; polymerase-like PAL 5e-98
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-04
>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A Length = 269 Back     alignment and structure
 Score =  311 bits (797), Expect = e-103
 Identities = 119/266 (44%), Positives = 172/266 (64%), Gaps = 10/266 (3%)

Query: 269 KIKPDYVRSFVFENKLIPSTWIVIRIDGCHFHRFSEVHEFDKPNDEQALNLMNSCAVAVL 328
           K K +YVR F  ++  +   W+V+R+DG +FHRF+E H F KPND +AL LM  CA  V+
Sbjct: 3   KSKFEYVRDFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALQLMTKCAQTVM 62

Query: 329 EEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLN 388
           EE EDI  AYG SDEYSFV K  + +++R+AS+ ++ + S F S YV  W+++F  + L 
Sbjct: 63  EELEDIVIAYGQSDEYSFVFKRKTNWFKRRASKFMTHVASQFASSYVFYWRDYFEDQPLL 122

Query: 389 YPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLV-KSGKSKSEAQGCLKGT 447
           YPP FDGR V YPS+  ++DYL+WRQ DCHINN YNT FW L+ +SG +  +AQG L+GT
Sbjct: 123 YPPGFDGRVVVYPSNQTLKDYLSWRQADCHINNLYNTVFWALIQQSGLTPVQAQGRLQGT 182

Query: 448 QAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE---------NKSSVEKVW 498
            A +KNE+L  +F I+Y+    M+R+G+ +   + ++ +  E          K +V +  
Sbjct: 183 LAADKNEILFSEFNINYNNELPMYRKGTVLIWQKVDEVMTKEIKLPTEMEGKKMAVTRTR 242

Query: 499 NKVLVSHCNIIEPSFWMAHPSILNEE 524
            K +  HC+II  +FW  HP IL+E+
Sbjct: 243 TKPVPLHCDIIGDAFWKEHPEILDED 268
>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A Length = 269 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query527
3otd_A269 TRNA(His) guanylyltransferase; polymerase-like PAL 100.0
3otd_A269 TRNA(His) guanylyltransferase; polymerase-like PAL 100.0
>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A Back     alignment and structure
Probab=100.00  E-value=1.1e-102  Score=775.66  Aligned_cols=258  Identities=43%  Similarity=0.833  Sum_probs=232.6

Q ss_pred             CCCcccchhhccccccccCCCCeEEEEEeCCCcccccccCCCCCCChHHHHHHHHHHHHHHHHhCCCeEEEEeccceeEE
Q 009745            1 MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSF   80 (527)
Q Consensus         1 ma~s~~eyvk~fE~~~~l~p~~~ivVRlDGr~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~~~~~aY~~SDEiSf   80 (527)
                      ||||||||||.||++++|+|++|||||||||+|||||+.|+|+||||+|+|+||++||++||++++||++||||||||||
T Consensus         1 ma~sk~eyvr~fE~~d~llp~~~iVVRiDGr~F~kfs~~~~F~KPnD~r~l~lM~~aA~~lm~~~~~i~~aYg~SDEiSf   80 (269)
T 3otd_A            1 MAKSKFEYVRDFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALQLMTKCAQTVMEELEDIVIAYGQSDEYSF   80 (269)
T ss_dssp             --CCSSGGGGGGCCCCBCCTTSEEEEEEEETTHHHHHHHTTCCSSCCHHHHHHHHHHHHHHHHHSSSEEEEEEETTEEEE
T ss_pred             CCCccchhhhhhccccccCCCCeEEEEEeCCccchhhhhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeecCcchhhhhhhhHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcceeeeecCCHHHHHHHHHHHhhHHHHhhhhhHH
Q 009745           81 VFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETC  160 (527)
Q Consensus        81 vf~~~~~~f~rR~~KL~S~~aS~~Ss~f~~~~~~~fp~~~L~~pp~FD~Rvv~~Ps~~~v~dYl~WRQ~D~hrNnl~n~~  160 (527)
                      ||++++.+|+||++||+|++||+|||+|+++|+++||+.+|.+||+||||||+||+.++|+|||+|||+|||||||||||
T Consensus        81 vf~~~~~~f~rR~~KL~S~~aS~fSs~y~~~w~~~fp~~~L~~pp~FD~Rvv~~P~~~~v~dYl~WRQ~D~h~Nnlynt~  160 (269)
T 3otd_A           81 VFKRKTNWFKRRASKFMTHVASQFASSYVFYWRDYFEDQPLLYPPGFDGRVVVYPSNQTLKDYLSWRQADCHINNLYNTV  160 (269)
T ss_dssp             EECTTCCTTTTBHHHHHHHHHHHHHHHHHHTHHHHCSSSCCCSCCCEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCChhhcchhHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCceeEEeCCCHHHHHHHHHHHHHHHHHHhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH-HcCCCHHHHHHHhcCCChhHHHHHHHHhhCCCCCCCcccccCCeEEEEeeeecccccc--------CCCCccce
Q 009745          161 LWMLI-KHGKSENEAQEILKGTQKQEKNELLFQQFGVNYKKLPEMFRQGSCVFKTEMEDIVKYN--------ENGAPVKR  231 (527)
Q Consensus       161 fw~Lv-~~g~s~~eA~~~L~G~~~~dknElLf~~~GINyn~~P~~~rkGs~i~r~~~~~~~~~~--------~~g~~~~~  231 (527)
                      ||+|| ++|+|++||+++|+||.++|||||||++||||||++|+||||||+|+|+.++..+...        +.+.++++
T Consensus       161 fw~Lv~~~G~s~~eA~~~L~Gt~s~dknEiLf~~fGINyn~~P~~~rkGs~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (269)
T 3otd_A          161 FWALIQQSGLTPVQAQGRLQGTLAADKNEILFSEFNINYNNELPMYRKGTVLIWQKVDEVMTKEIKLPTEMEGKKMAVTR  240 (269)
T ss_dssp             HHHHHHTTCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCGGGSCHHHHHCEEEEEC-------------------------
T ss_pred             HHHHHHhcCCCHHHHHHHHcCCcHHHHHHHHHHHcCCChhhCcHhHcceEEEEEeeeecccccccccccccccccccccc
Confidence            99999 7899999999999999999999999999999999999999999999999887644321        22334444


Q ss_pred             eeeeeeEeeccCcccccccccchhhHhh
Q 009745          232 LRRKARIVHSENIAGKSFWNGHSCLLKE  259 (527)
Q Consensus       232 ~r~k~~~~~~~dii~d~fW~~~~~ll~~  259 (527)
                      .|++ |+++|+|||+|+||++|||||+.
T Consensus       241 ~~~~-i~~~h~dii~d~fw~~~~~~l~~  267 (269)
T 3otd_A          241 TRTK-PVPLHCDIIGDAFWKEHPEILDE  267 (269)
T ss_dssp             --CC-EEEECCCCSSHHHHHHCTHHHHS
T ss_pred             cccc-eeEEecCCcCchhhhhCchhccC
Confidence            5544 56899999999999999999974
>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00