Citrus Sinensis ID: 009768

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520------
Protein Sequence
MQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNGGFDDEAPSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF
Secondary Structure (PSIPRED)
cccccccHHHHHHHHccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHcccccEEEEccccccccccccccccHHHHHHHccccccccccccccEEEEcccccccccccccccccccccccccccccccccccEEEEcccccccccccccccEcccccccccccccccccEcccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEHHHHcccHHHcccccccccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
mqtgiispsklrmkligphhnrkkdgsnsnsartspsrlddsEFVRNSllnggfddeapslevasekgagevvlghnqgeqasfqpnetlprentEVSRVKMqqfskgdsvnlsaihpmrmheddnldydsnassssfefhkgersmqnhmarsfsrpmpskwndAEKWIMNRQIIQANYAKKNALhnqanrlpatnmvrvvpeygtydhkpstvraadtkrvdfcqtashtlekfsfvpsgthqahggnamidsctqskdleeviqtdvpctksssenesvvPAIRSVCMrdmgtemtpvasqepsrtatpvgattplrsptssipstprgrapastpmeqtgidesqhpvenskrdlSEQEIKEKTRREIVALGVQLGKMNIAawaskdeqgkntssaeknsdmEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGeyirqtgqipsshftccgwf
Flexible Loop (DISEMBL)
mqtgiispsklrmKLIGphhnrkkdgsnsnsartspsrlddsEFVRNSLLNGGFDDEAPSLEVASEKGAGEVVLGHnqgeqasfqpnetlprENTEVSRVKmqqfskgdsvnlsaIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQIIQANYAKKNALHnqanrlpatnMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTdvpctksssenesvvpAIRSVCMRDMGTEmtpvasqepsrtatpvgattplrsptssipstprgraPASTPmeqtgidesqhpvenskrdlseqeikekTRREIVALGVQLGKMNIaawaskdeqgkntssaeknsdmeelERIEYEKRASAWAeaekskhiarfkreeikiqaWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMvkkismsrqrseeKRAAAearksrdaertaaqgeyirqtgqipsshFTCCGWF
Low Complexity Region (SEG)
MQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNGGFDDEAPSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGAttplrsptssipstpRGRAPASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQrseekraaaearksrdaerTAAQGEYIRQTGQIPSSHFTCCGWF
Disordered region (IsUnstruct)
********************************************************************************************************************************************************************DAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVP**********************************************************************************************************************************EIVALGVQLGKMNIAAW**********************************************************************************************************************************SHFTCCGW*
Disordered Region (DISOPRED)
******SPSKLRMK**********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************WA**EKSK***RFKREEIKIQAWES****************************************************************RQ*GQIPSSHFTCCGWF
Disordered Region (DISEMBL)
MQTGIISPSKLRMKLIGPH*********************DSEFVRNSLLNGGFDDEAPSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDV***********VVPAIRSVCMRDMGTE******************************************************************IKEKTRREIVALGVQLGKMNIAAWASK*****************ELERIEYEK***********KHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQI***************************************QGEYIRQTGQIPSSHFTCCGWF
Disordered Region (DISPRO)
****IISPSKLRMKLIGPHHNRKKD******************************DEAPSLEVASEK******************************************************H**************************************SKWNDAEKWIMNR*************************************************************************************************************VPAIRSVCMRDMGTEMTPV*********************************************************LSEQEIKEKTRREIVALGVQLGKMNIAAWASK****************EELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAE*******ERTA**GEYI**T*QIPSSHFTCCGWF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNGGFDDEAPSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	526	2.2.26 [Sep-21-2011]
P93788	198	Remorin OS=Solanum tubero	N/A	no	0.218	0.580	0.363	3e-09
Q9M2D8	212	Uncharacterized protein A	no	no	0.212	0.528	0.354	2e-08
O80837	190	Remorin OS=Arabidopsis th	no	no	0.243	0.673	0.335	2e-08

>sp|P93788|REMO_SOLTU Remorin OS=Solanum tuberosum PE=1 SV=1

 Score = 63.9 bits (154), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 6/121 (4%)

Query: 409 LERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQI 465
           L R+  EKR S   AW E+EKSK   + +++   I AWE+ +KA LEAE++++E ++E+ 
Sbjct: 81  LARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKK 140

Query: 466 RAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGW 525
           +A+   KM  KI++  + +EEKRA  EA++  D  +        R TG  P       G 
Sbjct: 141 KAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKK---ILGI 197

Query: 526 F 526
           F
Sbjct: 198 F 198

Binds to both simple and complex galacturonides. May be involved in cell-to-cell signaling and molecular transport.
Solanum tuberosum (taxid: 4113)

>sp|Q9M2D8|Y3126_ARATH Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1

 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 74/124 (59%), Gaps = 12/124 (9%)

Query: 409 LERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQI 465
           L  +  EKR S   AW E+EKSK   + +++   + AWE+ +KA +EA++++IE ++E+ 
Sbjct: 95  LADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKK 154

Query: 466 RAQAQAKMVKKISMSRQRSEEKRAAAEARKSRD---AERTAAQGEYIRQTGQIPSSHFTC 522
           +A+   +M  K++   + +EE+RA  EA++  D   AE TAA+    R TG +P +    
Sbjct: 155 KAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAK---YRATGIVPKA---T 208

Query: 523 CGWF 526
           CG F
Sbjct: 209 CGCF 212

Arabidopsis thaliana (taxid: 3702)

>sp|O80837|REMO_ARATH Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 77/131 (58%), Gaps = 3/131 (2%)

Query: 396 NTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEM 455
           ++ SA+++  + +LE+ +      AW E+EKSK   R +++   + AWE+ +KA +EA++
Sbjct: 63  SSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQL 122

Query: 456 RRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQI 515
           R+IE ++E+ +AQ   KM  K++   + +EEKRA  EA+K  +  +    G   R TG +
Sbjct: 123 RKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVV 182

Query: 516 PSSHFTCCGWF 526
           P +    CG F
Sbjct: 183 PKA---TCGCF 190

Exhibits a non sequence-specific DNA-binding activity.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	526
441481999	541	remorin-3 protein [Dimocarpus longan]	0.996	0.968	0.771	0.0
255584507	535	DNA binding protein, putative [Ricinus c	0.982	0.966	0.699	0.0
356525106	540	PREDICTED: uncharacterized protein LOC10	0.992	0.966	0.675	0.0
225443950	526	PREDICTED: uncharacterized protein LOC10	0.973	0.973	0.684	0.0
356512331	540	PREDICTED: uncharacterized protein LOC10	0.992	0.966	0.671	0.0
147838010	585	hypothetical protein VITISV_036630 [Viti	0.973	0.875	0.682	0.0
356526393	540	PREDICTED: uncharacterized protein LOC10	0.992	0.966	0.671	0.0
224061059	528	predicted protein [Populus trichocarpa]	0.967	0.964	0.633	0.0
449433601	537	PREDICTED: uncharacterized protein LOC10	0.988	0.968	0.631	1e-175
15220725	509	Remorin family protein [Arabidopsis thal	0.906	0.937	0.553	1e-146

>gi|441481999|gb|AGC39094.1| remorin-3 protein [Dimocarpus longan]

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/534 (77%), Positives = 463/534 (86%), Gaps = 10/534 (1%)

Query: 1   MQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLL--NGG-FDDE 57
           +QTGIISPSKLRMKLIGPH NRKK+GSNSNS+RTSP++LDDSEFVRNSLL  NGG FD+E
Sbjct: 9   VQTGIISPSKLRMKLIGPH-NRKKEGSNSNSSRTSPAKLDDSEFVRNSLLASNGGDFDEE 67

Query: 58  --APSLEVASEKGAGEVVLGHNQG-EQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLS 114
             APSL+VASEK   EVVL +NQG +QAS Q  E +PRE+ +V R KMQ F K DS N +
Sbjct: 68  VAAPSLDVASEKAGREVVLDNNQGGDQASCQLKEAMPRESADVGRSKMQ-FLKVDSGNSN 126

Query: 115 AIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQ 174
           AIHPMR+ ED+NLDYDSNASSSSFEFHKGERS+ N +ARSFSRPMPSKWNDAEKWIMN+Q
Sbjct: 127 AIHPMRVFEDENLDYDSNASSSSFEFHKGERSVHNSIARSFSRPMPSKWNDAEKWIMNKQ 186

Query: 175 IIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASH-TL 233
             QAN+ KK AL+NQ NRLP TNMVRVVPE+ TYDHKPS  RAADTKRVDFCQ  S    
Sbjct: 187 NAQANHPKKIALYNQTNRLPQTNMVRVVPEHVTYDHKPSMARAADTKRVDFCQPVSQGAF 246

Query: 234 EKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVCMRD 293
           EKFSF+P GTHQA+GGNA++D+ TQSKD ++V Q D+ CTK S+E+ SVVPAIRSV MRD
Sbjct: 247 EKFSFIPPGTHQAYGGNALVDTYTQSKDTKDVGQQDLSCTKISTEDTSVVPAIRSVSMRD 306

Query: 294 MGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQTGIDESQHPVE 353
           MGTEMTPVASQEPSRTATPVGATTPLRSP SSIPSTPR  APASTP++ T  DESQ PVE
Sbjct: 307 MGTEMTPVASQEPSRTATPVGATTPLRSPASSIPSTPRRGAPASTPVDNTTDDESQCPVE 366

Query: 354 NSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQ-GKNTSSAEKNSDMEELERI 412
           N +R L++QE+KEKTRREIVALGVQLGKMNIAAWASK+EQ  KN + + +  DMEELERI
Sbjct: 367 NIRRVLTDQEMKEKTRREIVALGVQLGKMNIAAWASKEEQENKNDNPSAETVDMEELERI 426

Query: 413 EYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAK 472
           EYE RA+AW EAEKSKH ARFKREEIKIQAWESRQKAKLEAEM+RIEAEVEQ+RAQAQAK
Sbjct: 427 EYENRAAAWEEAEKSKHTARFKREEIKIQAWESRQKAKLEAEMQRIEAEVEQMRAQAQAK 486

Query: 473 MVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF 526
           MVKKI+M+RQ+SEEKRAAA+ARK+RDAERTAAQ EYIRQTG++PSSHFTCCGW 
Sbjct: 487 MVKKIAMARQKSEEKRAAADARKNRDAERTAAQAEYIRQTGRMPSSHFTCCGWL 540

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584507|ref|XP_002532982.1| DNA binding protein, putative [Ricinus communis] gi|223527246|gb|EEF29406.1| DNA binding protein, putative [Ricinus communis]

 Score =  741 bits (1912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/535 (69%), Positives = 437/535 (81%), Gaps = 18/535 (3%)

Query: 1   MQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNGGFDDE--A 58
           +QTG+ISP+KLRMKL+GPHHNRKKDGSN NS+RTSPSRL+D+EFV+NSLL    D+E  A
Sbjct: 9   VQTGMISPTKLRMKLLGPHHNRKKDGSNCNSSRTSPSRLEDTEFVKNSLLASN-DEEVAA 67

Query: 59  PSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSAIHP 118
           PSL+++   GA   V+  +Q +Q S Q  +TL +EN  + R KMQQF+KG+S N SA+HP
Sbjct: 68  PSLDLSVPDGA---VVDPSQVDQTSSQLKDTLSKENGNMGRFKMQQFTKGESANSSAVHP 124

Query: 119 MRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQIIQA 178
           MR  EDDNLDYDSNASSSSFEFHK ER+  N   RSFSRPMPSKWNDAEKWIMNRQ ++ 
Sbjct: 125 MRSLEDDNLDYDSNASSSSFEFHK-ERAAHNQFTRSFSRPMPSKWNDAEKWIMNRQNMRP 183

Query: 179 NYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASH-TLEKFS 237
           N++KKNA++NQANR+P TNMVRV PE   +D K S  R  DTKRVDFCQ AS   LEKFS
Sbjct: 184 NFSKKNAVYNQANRMPGTNMVRVAPESVNHDLKLSLSRVVDTKRVDFCQPASQMALEKFS 243

Query: 238 FV----PSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVCMRD 293
           F+    PS + QA+GGN +ID CTQSKDL EV Q ++  T+SS E+ +V+P IRSVCMRD
Sbjct: 244 FISPGTPSVSGQAYGGNVLIDQCTQSKDLREVDQRELAITRSSVEDTAVLPVIRSVCMRD 303

Query: 294 MGTEMTPVASQEPSRTATPVGATTP--LRSPTSSIPSTPRGRAPASTPMEQTGIDESQHP 351
           MGTEMTP+ASQEPSRT TPVG+TTP  LRSPTSSIPSTPR  APA TPME    ++++  
Sbjct: 304 MGTEMTPIASQEPSRTGTPVGSTTPHDLRSPTSSIPSTPRRGAPAPTPMEHGTDEDAEST 363

Query: 352 VENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELER 411
            EN K++L+EQE K KTRREIVALGVQLGKMNIAAWASK++Q KNTSS     D EELER
Sbjct: 364 CENGKKELTEQEFKLKTRREIVALGVQLGKMNIAAWASKEDQDKNTSSV----DAEELER 419

Query: 412 IEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQA 471
           IE+EKRA+AW EAEKSKH AR+KREEIKIQAWES+QKAKLEAEMRRIEA VEQ+RAQAQA
Sbjct: 420 IEFEKRAAAWEEAEKSKHTARYKREEIKIQAWESQQKAKLEAEMRRIEARVEQMRAQAQA 479

Query: 472 KMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF 526
           KMVKKI+M+RQ+SEEKRA AEARK+RDAERTAAQ EYIRQTG++PSSH+ CCGW 
Sbjct: 480 KMVKKIAMARQKSEEKRATAEARKNRDAERTAAQAEYIRQTGRMPSSHYICCGWL 534

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525106|ref|XP_003531168.1| PREDICTED: uncharacterized protein LOC100805128 [Glycine max]

 Score =  707 bits (1825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/536 (67%), Positives = 428/536 (79%), Gaps = 14/536 (2%)

Query: 1   MQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLL---NGGFDDE 57
           +Q GIISPSKLRMKL+GP H+RKKDGSNSNS+RTSPSR++D+EFV NSLL   N   DDE
Sbjct: 9   VQAGIISPSKLRMKLLGPLHHRKKDGSNSNSSRTSPSRIEDAEFV-NSLLGSKNDNLDDE 67

Query: 58  --APSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSA 115
             +PSL+V S K + + VL   Q  Q S++P ET+P+EN++  RVKMQ F K D+ + SA
Sbjct: 68  VTSPSLDVLSLKPSSDAVLDRRQNGQISYEPKETMPKENSDTGRVKMQHFQKVDTGSSSA 127

Query: 116 IHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQI 175
           IH +R  ED+NLDYDSNASSSSFEF KGER   N   RS  RP+PSKWNDAEKWIMNRQ 
Sbjct: 128 IHAVRAIEDENLDYDSNASSSSFEFDKGERPGNNPATRSLFRPIPSKWNDAEKWIMNRQN 187

Query: 176 IQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHT-LE 234
           IQAN++KKN  HNQANR+P TNM RV PE G YDHK    +A +TKRVD CQ  SH   E
Sbjct: 188 IQANHSKKNTAHNQANRMP-TNMGRVAPESGNYDHKLPIGKATETKRVDICQPTSHMGFE 246

Query: 235 KFSFVPSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVC 290
           KFSFVPS  H    QAHG N +++S  QSKDL++V +  + C++S+ +++SV+P IRSV 
Sbjct: 247 KFSFVPSDAHSVSGQAHGRNPVVESLPQSKDLKDVNELGLCCSRST-DDQSVMPGIRSVA 305

Query: 291 MRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQTGIDESQH 350
           MRDMGTEMTPV SQEPSRTATPVG+ TPLRSP SS+PSTPR  APA TP++ T  ++SQ 
Sbjct: 306 MRDMGTEMTPVPSQEPSRTATPVGSATPLRSPVSSMPSTPRRGAPAPTPLDNTTNEDSQF 365

Query: 351 PVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELE 410
           PVEN KR LSE+E+K KTRREI ALGVQLGKMNIAAWASKDEQ KN SS  ++  ++E E
Sbjct: 366 PVENGKRHLSEEEMKIKTRREIAALGVQLGKMNIAAWASKDEQEKNKSSP-RDMSVQEQE 424

Query: 411 RIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQ 470
           RIE+EKRA+ W EAEKSKH ARFKREEIKIQAWES+QKAKLEAEMRRIEA+VEQ+RAQ  
Sbjct: 425 RIEFEKRAALWEEAEKSKHTARFKREEIKIQAWESQQKAKLEAEMRRIEAKVEQMRAQTH 484

Query: 471 AKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF 526
           AKMVKKI+M+RQRSEEKRAAAEARK+R+AERT AQ EYIRQTG++PSS++ CCGW 
Sbjct: 485 AKMVKKIAMARQRSEEKRAAAEARKNREAERTVAQTEYIRQTGRLPSSNYICCGWL 540

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443950|ref|XP_002272255.1| PREDICTED: uncharacterized protein LOC100256651 [Vitis vinifera] gi|297740766|emb|CBI30948.3| unnamed protein product [Vitis vinifera]

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/532 (68%), Positives = 426/532 (80%), Gaps = 20/532 (3%)

Query: 1   MQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNGGFDDEAPS 60
           +QTGIISPSKLRMKL+GPHH RKKDGSNSNS+RTSPS+L+DSEFV+NSLL    +DEA S
Sbjct: 9   VQTGIISPSKLRMKLMGPHHQRKKDGSNSNSSRTSPSKLEDSEFVKNSLL--ALEDEASS 66

Query: 61  LEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSAIHPMR 120
           LEV+S K  G+V+    QG+Q S QP E+LPREN  V RVK QQ+SK D+ N S IHP+R
Sbjct: 67  LEVSSVKLPGDVMPDLAQGDQISCQPKESLPRENGSVGRVKTQQYSKCDTGNSSTIHPVR 126

Query: 121 MHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQIIQANY 180
             E++NLDYDSNASSSSFEFHK ERS+ N ++RS SRPMPSKWNDAEKWIMNRQ  QANY
Sbjct: 127 TLEEENLDYDSNASSSSFEFHK-ERSLHNSVSRSLSRPMPSKWNDAEKWIMNRQNAQANY 185

Query: 181 AKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHT-LEKFSFV 239
            KKN L +Q NRL   NMVRV PE  + DHK S       KRVDFCQ A+   LEKFSFV
Sbjct: 186 TKKNVLQSQGNRLAGANMVRVAPESASTDHKLSV------KRVDFCQPAAQMGLEKFSFV 239

Query: 240 PSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVCMRDMG 295
           P+G H    QA+GGNA+ID C Q+KDL+EV   ++ C K S E+ +   AIR+V MRDMG
Sbjct: 240 PNGAHPISAQANGGNALIDLC-QTKDLKEVDPRELSCLKGSPEDTTGFSAIRAVSMRDMG 298

Query: 296 TEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPR-GRAPASTPMEQTGIDESQHPVEN 354
           TEMTP+ SQ+PSRTATPVGATTPLRSPTSS+PSTPR   APA TP E    DES+   + 
Sbjct: 299 TEMTPIPSQDPSRTATPVGATTPLRSPTSSLPSTPRRAGAPAPTPAEHMTDDESR---DY 355

Query: 355 SKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEY 414
             R+LSE+E+K KTR+EIVALGVQLGKMNIAAWASKDE+ K+  S E + D+E+ ERIEY
Sbjct: 356 RNRELSEEELKLKTRKEIVALGVQLGKMNIAAWASKDEKEKSAQSGETH-DLEDHERIEY 414

Query: 415 EKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMV 474
           E+RA+AW EAEKSKH AR+KREEIKIQAWES+QKAKLEAEMRRIEA+VEQ+RA AQAKMV
Sbjct: 415 ERRAAAWEEAEKSKHAARYKREEIKIQAWESQQKAKLEAEMRRIEAQVEQMRAHAQAKMV 474

Query: 475 KKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF 526
           KKI+M+RQRSEEKRAAAEA ++R+AE+T+AQ EYIRQTG+IP+S F CCGW 
Sbjct: 475 KKIAMARQRSEEKRAAAEANRNREAEKTSAQAEYIRQTGRIPTSQFVCCGWL 526

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512331|ref|XP_003524873.1| PREDICTED: uncharacterized protein LOC100787239 [Glycine max]

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/536 (67%), Positives = 426/536 (79%), Gaps = 14/536 (2%)

Query: 1   MQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLL---NGGFDDE 57
           +Q GIISPSKLRMKL+GPHH+RKKDGSNSNS+RTSPSR++D+EFV NSLL   N   DDE
Sbjct: 9   VQAGIISPSKLRMKLLGPHHHRKKDGSNSNSSRTSPSRIEDAEFV-NSLLDSKNDNLDDE 67

Query: 58  --APSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSA 115
             +PSL+V S K +   +L   Q  Q S++P ET+P+EN ++ R K   F K D+ + SA
Sbjct: 68  VTSPSLDVLSLKPSSNALLDRKQNGQISYEPKETMPKENGDMGRAKTHHFPKVDTGSSSA 127

Query: 116 IHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQI 175
           IH +R  ED+NLDYDSNASSSSFEF KGER   N   RS  RP+PSKWNDAEKWIMNRQ 
Sbjct: 128 IHAVRAIEDENLDYDSNASSSSFEFDKGERPGNNPATRSLFRPIPSKWNDAEKWIMNRQN 187

Query: 176 IQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHT-LE 234
           IQAN++KK   HNQANR+P TNM RV PE G  DHK  T +  +TKRVDFCQ  SH   E
Sbjct: 188 IQANHSKKKTAHNQANRMP-TNMGRVAPESGNCDHKLPTGKVTETKRVDFCQPTSHMGFE 246

Query: 235 KFSFVPSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVC 290
           KFSFVPS  H    QAHG N +++S  QSKDL+EV +  + C++S+ +++SV P IRSV 
Sbjct: 247 KFSFVPSDAHSVSGQAHGRNPVVESLPQSKDLKEVNELGLSCSRST-DDQSVTPGIRSVA 305

Query: 291 MRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQTGIDESQH 350
           MRDMGTEMTPV SQEPSRTATPVG+ TPLRSP SS+PSTPR  APA TP++ T  ++SQ 
Sbjct: 306 MRDMGTEMTPVPSQEPSRTATPVGSATPLRSPVSSMPSTPRRGAPAPTPLDNTTDEDSQF 365

Query: 351 PVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELE 410
           PVEN KR+LSE+E+K KTRREI ALGVQLGKMNIAAWASKDEQ KN SS ++ +++ E E
Sbjct: 366 PVENGKRNLSEEEMKIKTRREIAALGVQLGKMNIAAWASKDEQEKNKSSPQE-ANVNEQE 424

Query: 411 RIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQ 470
           RIE+EKRA+ W EAEKSKH ARFKREEIKIQAWES+QKAKLEAEMRRIEA+VEQ+RAQ  
Sbjct: 425 RIEFEKRAALWEEAEKSKHTARFKREEIKIQAWESQQKAKLEAEMRRIEAKVEQMRAQTH 484

Query: 471 AKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF 526
           AKMVKKI+M+RQRSEEKRAAAEARK+R+AERTAAQ EYIRQTG++PSS++ CCGW 
Sbjct: 485 AKMVKKIAMARQRSEEKRAAAEARKNREAERTAAQTEYIRQTGRLPSSNYICCGWL 540

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838010|emb|CAN71634.1| hypothetical protein VITISV_036630 [Vitis vinifera]

 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/532 (68%), Positives = 425/532 (79%), Gaps = 20/532 (3%)

Query: 1   MQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNGGFDDEAPS 60
           +QTGIISPSKLRMKL+GPHH RKKDGSNSNS+RTSPS+L+DSEFV+NSLL    +DEA S
Sbjct: 68  VQTGIISPSKLRMKLMGPHHQRKKDGSNSNSSRTSPSKLEDSEFVKNSLL--ALEDEASS 125

Query: 61  LEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSAIHPMR 120
           LEV+S K  G+V+    QG+Q S QP E+LPREN  V RVK QQ+SK D+ N S IHP+R
Sbjct: 126 LEVSSVKLPGDVMPDLAQGDQISCQPKESLPRENGSVGRVKTQQYSKCDTGNSSTIHPVR 185

Query: 121 MHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQIIQANY 180
             E++NLDYDSNASSSSFEFHK ERS+ N ++RS SRPMPSKWNDAEKWIMNRQ  QANY
Sbjct: 186 TLEEENLDYDSNASSSSFEFHK-ERSLHNSVSRSLSRPMPSKWNDAEKWIMNRQNAQANY 244

Query: 181 AKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHT-LEKFSFV 239
            KKN L +Q NRL   NMVRV PE  + DHK S       KRVDFCQ A+   LEKFSFV
Sbjct: 245 TKKNVLQSQXNRLAGANMVRVAPESASTDHKLSV------KRVDFCQPAAQMGLEKFSFV 298

Query: 240 PSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVCMRDMG 295
           P+G H    QA+GGNA+ D C Q+KDL+EV   ++ C K S E+ +   AIR+V MRDMG
Sbjct: 299 PNGAHPISAQANGGNALXDLC-QTKDLKEVDPRELSCLKGSPEDTTGFSAIRAVSMRDMG 357

Query: 296 TEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPR-GRAPASTPMEQTGIDESQHPVEN 354
           TEMTP+ SQ+PSRTATPVGATTPLRSPTSS+PSTPR   APA TP E    DES+   + 
Sbjct: 358 TEMTPIPSQDPSRTATPVGATTPLRSPTSSLPSTPRRAGAPAPTPAEHMTDDESR---DY 414

Query: 355 SKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEY 414
             R+LSE+E+K KTR+EIVALGVQLGKMNIAAWASKDE+ K+  S E + D+E+ ERIEY
Sbjct: 415 RNRELSEEELKLKTRKEIVALGVQLGKMNIAAWASKDEKEKSAQSGETH-DLEDHERIEY 473

Query: 415 EKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMV 474
           E+RA+AW EAEKSKH AR+KREEIKIQAWES+QKAKLEAEMRRIEA+VEQ+RA AQAKMV
Sbjct: 474 ERRAAAWEEAEKSKHAARYKREEIKIQAWESQQKAKLEAEMRRIEAQVEQMRAHAQAKMV 533

Query: 475 KKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF 526
           KKI+M+RQRSEEKRAAAEA ++R+AE+T+AQ EYIRQTG+IP+S F CCGW 
Sbjct: 534 KKIAMARQRSEEKRAAAEANRNREAEKTSAQAEYIRQTGRIPTSQFVCCGWL 585

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526393|ref|XP_003531802.1| PREDICTED: uncharacterized protein LOC100790482 [Glycine max]

 Score =  696 bits (1795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/536 (67%), Positives = 423/536 (78%), Gaps = 14/536 (2%)

Query: 1   MQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLL---NGGFDDE 57
           +Q GIISPSKLRMKL+GP H+RKKDGSNSNS+RTSPSR++D+EFV NSLL   N   DDE
Sbjct: 9   VQAGIISPSKLRMKLLGPLHHRKKDGSNSNSSRTSPSRIEDAEFV-NSLLGSKNDNLDDE 67

Query: 58  --APSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSA 115
             +PSL+V S K + + VL   Q  Q S++  ET+ +EN+   RVKMQ F K D+ N SA
Sbjct: 68  VTSPSLDVLSLKPSSDAVLDRRQNGQISYEAKETMAKENSNTGRVKMQHFQKVDTGNSSA 127

Query: 116 IHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQI 175
           IH +R  ED+NLDYDSNASSSSFEF KGER   N   RS  RP+PSKWNDAEKWIMNRQ 
Sbjct: 128 IHAVRAIEDENLDYDSNASSSSFEFDKGERPGNNPATRSLFRPIPSKWNDAEKWIMNRQN 187

Query: 176 IQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHT-LE 234
           IQAN++KKN  HNQANR+P TNM RV PE G YDHK    +A +TKRVD CQT S+   E
Sbjct: 188 IQANHSKKNTAHNQANRMP-TNMGRVAPESGNYDHKLPIGKATETKRVDICQTTSYMGFE 246

Query: 235 KFSFVPSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVC 290
           KFSFVPS  H    QAHG N +++S  QSKDL++V +  + C++S+ +++SV+P IRSV 
Sbjct: 247 KFSFVPSDAHSVSGQAHGRNPVVESLPQSKDLKDVNELGLSCSRST-DDQSVMPGIRSVA 305

Query: 291 MRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQTGIDESQH 350
           MRDMGTEMTPV SQEPSRTATPVG+ TPLRSP SS+PSTPR  APA TP++ T  ++SQ 
Sbjct: 306 MRDMGTEMTPVPSQEPSRTATPVGSATPLRSPVSSMPSTPRRGAPAPTPLDNTTNEDSQF 365

Query: 351 PVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELE 410
           PVEN KR LSE+E+K KTRREI ALGVQLGKMNIAAWASKDEQ KN SS    S +E+ E
Sbjct: 366 PVENGKRHLSEEEMKIKTRREIAALGVQLGKMNIAAWASKDEQEKNKSSPRDVSVLEQ-E 424

Query: 411 RIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQ 470
           RIE+EKRA+ W EAEKSKH ARFKREEIKIQAWES+QKAKLEAEM RIEA+VEQ+RAQ  
Sbjct: 425 RIEFEKRAALWEEAEKSKHTARFKREEIKIQAWESQQKAKLEAEMGRIEAKVEQMRAQTH 484

Query: 471 AKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF 526
           AKMVKKI+M+RQR EEK AAAEARK+R+AERTAAQ EYIRQTG++PSS++ CCGW 
Sbjct: 485 AKMVKKIAMARQRLEEKCAAAEARKNREAERTAAQTEYIRQTGRLPSSNYICCGWL 540

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061059|ref|XP_002300338.1| predicted protein [Populus trichocarpa] gi|222847596|gb|EEE85143.1| predicted protein [Populus trichocarpa]

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/537 (63%), Positives = 402/537 (74%), Gaps = 28/537 (5%)

Query: 1   MQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNGGFDD---- 56
           +Q+GIISPSKLRMKL+GPHHNRKKDGSNSNS+RTSPS+L D+EFV+NSLL   F D    
Sbjct: 9   VQSGIISPSKLRMKLVGPHHNRKKDGSNSNSSRTSPSKLQDNEFVKNSLLASDFGDFGEE 68

Query: 57  -EAPSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSA 115
             A  LEVAS     E VL   Q +     P ET+P+E  +  RVKMQ FSK +  N SA
Sbjct: 69  VAALGLEVASVNFPSEAVLDLCQADL----PMETVPKEIGDAGRVKMQPFSKCEKGNSSA 124

Query: 116 IHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQI 175
           +HP+R  ED+NLDYDSNASSSSFEFH  ERS+ N  ++ FSRPM SKWNDAEKWIM RQ 
Sbjct: 125 VHPVRTVEDENLDYDSNASSSSFEFH-NERSVNNQFSKRFSRPMSSKWNDAEKWIMKRQN 183

Query: 176 IQANYAKKNA-LHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQ-TASHTL 233
           +Q NY KKN  LHNQANR P T++ RV P    YD + S  R ADTK +DFC  +     
Sbjct: 184 VQPNYVKKNNNLHNQANRNPVTSVDRVAPALSNYDPRSSYSRVADTKLIDFCLPSYQQAF 243

Query: 234 EKFSFVPSGT----HQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSV 289
           EKFSF+P G+     Q +G + ++D C QS DL+EV Q ++          S VP +RSV
Sbjct: 244 EKFSFIPPGSLTISGQENGVDTLVDRCAQSTDLKEVDQREL----------SFVPVVRSV 293

Query: 290 CMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQTGIDESQ 349
           CMRDMGTEMTPV S EPSRTATPV ATTPLRSPTSSIPSTP+ RAPA T  +    D++Q
Sbjct: 294 CMRDMGTEMTPVTSLEPSRTATPVDATTPLRSPTSSIPSTPQRRAPAPTTTDHCSNDDTQ 353

Query: 350 HPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEEL 409
           H   N K +L+EQE+K KTRREI ALGVQLGKMNIAAWASK++Q K+ SS E  ++ME  
Sbjct: 354 HATGNGKIELTEQELKLKTRREIEALGVQLGKMNIAAWASKNDQQKHASSLE-TTEMEN- 411

Query: 410 ERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQA 469
           E+IE+ KRA+AW EAE+SKH AR+KREEIKIQAWES++K KLEAEMRRIEA VEQ+RAQA
Sbjct: 412 EQIEFVKRAAAWEEAEQSKHTARYKREEIKIQAWESQRKVKLEAEMRRIEARVEQMRAQA 471

Query: 470 QAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF 526
            AKMVKKI+M+RQRSEEK  AAEARK++DAERTAAQ EYIRQTG++PSS++ CCGWF
Sbjct: 472 HAKMVKKIAMTRQRSEEKWVAAEARKNQDAERTAAQAEYIRQTGRMPSSNYICCGWF 528

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433601|ref|XP_004134586.1| PREDICTED: uncharacterized protein LOC101217408 [Cucumis sativus]

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 338/535 (63%), Positives = 407/535 (76%), Gaps = 15/535 (2%)

Query: 1   MQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLL----NGGFDD 56
           +QTGIISPSKLRMKL+GPHH++KKDGSNSNS+RTSPS+L+DSEFVRNSLL    +G F+D
Sbjct: 9   VQTGIISPSKLRMKLMGPHHHKKKDGSNSNSSRTSPSKLEDSEFVRNSLLLATESGDFED 68

Query: 57  EAPS--LEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLS 114
           E  S  LEV SEK   + V      +++S  P E L +E++E  R +MQQ  KGD  N S
Sbjct: 69  EVTSSCLEVPSEKVLNQSVSDPKPNDRSSGLPKEFLSKEHSESVRNRMQQCLKGDGCNSS 128

Query: 115 AIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQ 174
            +HP +  ED+NLDYDSNASSSSFEFHKGERS+ + ++RS  RPMPSKWNDAEKWI+NRQ
Sbjct: 129 TVHPSKSVEDENLDYDSNASSSSFEFHKGERSVHSSISRSHLRPMPSKWNDAEKWIINRQ 188

Query: 175 I--IQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHT 232
                ANY+KKNA      R+ ATNMVRV PE   Y+ + ST RA + K VDF Q+    
Sbjct: 189 NNGQAANYSKKNAPPTHGYRMAATNMVRVAPESANYELRSSTGRAVEAKHVDFYQSGLQM 248

Query: 233 -LEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVCM 291
             EKFSFVP G + +   N MIDSC+Q KDL+EV     P +K+S E+ + +PAIR+V M
Sbjct: 249 GPEKFSFVPVGVYSS-ADNVMIDSCSQIKDLKEVDHK--PSSKASKEDSTGIPAIRAVSM 305

Query: 292 RDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQTGIDESQHP 351
           RDMGTEMTPV SQEPSRTATPVGA+ PLRSPTSSIPSTPR  APA TP+EQ+ I   Q  
Sbjct: 306 RDMGTEMTPVPSQEPSRTATPVGAS-PLRSPTSSIPSTPRRDAPAPTPIEQSPIG-LQQL 363

Query: 352 VENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELER 411
            EN KR+LS  E+K KTRREI+ALG+QLGK NIAAWASKDE  +   +AE N+D E  ER
Sbjct: 364 TENGKRELSADEMKLKTRREILALGMQLGKTNIAAWASKDEPERKRHNAE-NADKEAFER 422

Query: 412 IEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQA 471
            E+EKRA+AW E EKSKH AR+KREEIKIQAWE++QK KLEAEMRR+EA+VEQ+RAQA+ 
Sbjct: 423 AEFEKRAAAWEEVEKSKHTARYKREEIKIQAWENQQKTKLEAEMRRVEAQVEQMRAQAEV 482

Query: 472 KMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF 526
           KM+KKI+M+RQ+SEEKRAAAE RK ++AER AAQ E IRQTG++PSS + CCGW 
Sbjct: 483 KMMKKIAMTRQKSEEKRAAAECRKKQEAERAAAQAEQIRQTGRMPSSPYICCGWL 537

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15220725|ref|NP_174322.1| Remorin family protein [Arabidopsis thaliana] gi|12322121|gb|AAG51095.1|AC025295_3 hypothetical protein [Arabidopsis thaliana] gi|26452636|dbj|BAC43401.1| unknown protein [Arabidopsis thaliana] gi|29824297|gb|AAP04109.1| unknown protein [Arabidopsis thaliana] gi|332193084|gb|AEE31205.1| Remorin family protein [Arabidopsis thaliana]

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 304/549 (55%), Positives = 388/549 (70%), Gaps = 72/549 (13%)

Query: 1   MQTGIISPSKLRMKLIGPHHNRKKDGS--NSNSARTSPSRL---DDSEFVRNSLL--NGG 53
           +Q  IISP+KLRMKL+GP +N K++GS  NSNS+RTSPSRL   DDSEF +NSLL  N  
Sbjct: 9   VQKSIISPTKLRMKLMGPLNNMKREGSKSNSNSSRTSPSRLQIPDDSEFSKNSLLASNSY 68

Query: 54  FDDE--APSLEVASEKGAGEVVL----GHNQGEQASFQPNETLPRENTEVSRVKMQQFSK 107
            DD+  A + ++   K   E VL      NQG +   +    +PREN +    ++QQF K
Sbjct: 69  SDDDVAATTTDIEVAKLPNEPVLYPTENDNQGSKDRCE--GVVPRENDQP---RLQQFRK 123

Query: 108 GDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHK--GERSMQNHMARSF-SRPMPSKWN 164
           GD +N+++ H MR  ED+NLDYDSNASSSSFEFH+  GERS QNH +R + SR MPSKWN
Sbjct: 124 GD-LNMASPHIMRPQEDENLDYDSNASSSSFEFHRARGERSNQNHGSRGYPSRQMPSKWN 182

Query: 165 DAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVD 224
           DAEKWIM+RQ +     +KN    Q NR+P    VR+VP+   Y+H  S        R+D
Sbjct: 183 DAEKWIMSRQNM---VMRKNG---QGNRIP----VRIVPDNAGYEHNKS--------RMD 224

Query: 225 FCQTAS-HTLEKF-SFVPSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSE 278
            CQ++     EKF + VPS  H    Q +GG+++ID  TQS DL +          SS +
Sbjct: 225 LCQSSQVDGFEKFPNVVPSAPHPILTQEYGGDSLIDQSTQSNDLAD----------SSHD 274

Query: 279 NESVVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPAST 338
           + +  PAIRSVCMRDMGTEMTP+ SQEPSR+ TPVGATTPLRSPTSS+PSTPRG  P  +
Sbjct: 275 HTTGGPAIRSVCMRDMGTEMTPIPSQEPSRSVTPVGATTPLRSPTSSLPSTPRGGQPEES 334

Query: 339 PMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTS 398
            M +           N++R+LSE+E K KTRREIVALGVQLGKMNIAAWASK    +   
Sbjct: 335 SMSK-----------NTRRELSEEEEKAKTRREIVALGVQLGKMNIAAWASK----EEEE 379

Query: 399 SAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRI 458
           + + N D EE ++IE+EKRA+AW EAEKSKH AR+KREEI+IQAWES++KAKLEAEMRRI
Sbjct: 380 NKKNNGDAEEAQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAWESQEKAKLEAEMRRI 439

Query: 459 EAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSS 518
           EA+VEQ++A+A+AK++KKI++++QRSEEKRA AEARK+RDAE+  A+ +YIR+TG+IP+S
Sbjct: 440 EAKVEQMKAEAEAKIMKKIALAKQRSEEKRALAEARKTRDAEKAVAEAQYIRETGRIPAS 499

Query: 519 HF-TCCGWF 526
            +  CCGWF
Sbjct: 500 SYKICCGWF 508

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	526
TAIR|locus:2204197	509	AT1G30320 "AT1G30320" [Arabido	0.450	0.465	0.537	6.7e-65
TAIR|locus:2051673	486	AT2G02170 "AT2G02170" [Arabido	0.718	0.777	0.371	9.9e-64
TAIR|locus:2008625	347	AT1G67590 "AT1G67590" [Arabido	0.231	0.351	0.354	7.2e-25
TAIR|locus:2197081	442	AT1G53860 "AT1G53860" [Arabido	0.368	0.438	0.252	2.1e-13
TAIR|locus:2050704	190	AT2G45820 "AT2G45820" [Arabido	0.243	0.673	0.303	1e-09
TAIR|locus:2115085	427	AT4G36970 "AT4G36970" [Arabido	0.192	0.236	0.303	2.7e-08
TAIR|locus:2101303	175	AT3G48940 "AT3G48940" [Arabido	0.247	0.742	0.264	1.5e-07
UNIPROTKB|P93788	198	P93788 "Remorin" [Solanum tube	0.134	0.358	0.405	3.4e-07
TAIR|locus:2098921	212	AT3G61260 [Arabidopsis thalian	0.347	0.863	0.239	3.8e-07
TAIR|locus:2172793	202	AT5G23750 "AT5G23750" [Arabido	0.243	0.633	0.276	1.6e-06

TAIR|locus:2204197 AT1G30320 "AT1G30320" [Arabidopsis thaliana (taxid:3702)]

 Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
 Identities = 136/253 (53%), Positives = 176/253 (69%)

Query:   275 SSSENESVVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGAXXXXXXXXXXXXXXXRGRA 334
             SS ++ +  PAIRSVCMRDMGTEMTP+ SQEPSR+ TPVGA               RG  
Sbjct:   271 SSHDHTTGGPAIRSVCMRDMGTEMTPIPSQEPSRSVTPVGATTPLRSPTSSLPSTPRGGQ 330

Query:   335 PASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQG 394
             P  + M +           N++R+LSE+E K KTRREIVALGVQLGKMNIAAWASK+E+ 
Sbjct:   331 PEESSMSK-----------NTRRELSEEEEKAKTRREIVALGVQLGKMNIAAWASKEEE- 378

Query:   395 KNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAE 454
                 + + N D EE ++IE+EKRA+AW EAEKSKH AR+KREEI+IQAWES++KAKLEAE
Sbjct:   379 ---ENKKNNGDAEEAQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAWESQEKAKLEAE 435

Query:   455 MRRIEAEVEQIRAQAQAKMVKKISMSRQXXXXXXXXXXXXXXXXXXXTAAQGEYIRQTGQ 514
             MRRIEA+VEQ++A+A+AK++KKI++++Q                     A+ +YIR+TG+
Sbjct:   436 MRRIEAKVEQMKAEAEAKIMKKIALAKQRSEEKRALAEARKTRDAEKAVAEAQYIRETGR 495

Query:   515 IPSSHFT-CCGWF 526
             IP+S +  CCGWF
Sbjct:   496 IPASSYKICCGWF 508

GO:0003677 "DNA binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2051673 AT2G02170 "AT2G02170" [Arabidopsis thaliana (taxid:3702)]

 Score = 609 (219.4 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
 Identities = 150/404 (37%), Positives = 216/404 (53%)

Query:   125 DNLDYDSNASSSS-FEFHKGERSMQNHMA--RSFSRPMPSKWNDAEKWIMNRQIIQANYA 181
             DN++   + S+SS FEF K E+   N     RSFS+P PSKW+DA+KWI +     AN  
Sbjct:    98 DNVNEIKSVSASSVFEFQKTEKEKVNQRMPIRSFSKPAPSKWDDAQKWIASPT---ANRP 154

Query:   182 KKNALHNQANRL-PATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVP 240
             K   +    ++  P+      +      +H+   V   DTKR+D  Q       KF    
Sbjct:   155 KTGQVQVPGSKKGPSFGRQSSMKIVEVAEHR--VVEEPDTKRIDVSQVKKDMGNKFGSWE 212

Query:   241 SGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVP--AIRSVCMRDMGTEM 298
               ++             ++  +E   + ++    SS       P    RSV MRDMGTEM
Sbjct:   213 VDSYTTVDSYVKPVLMVENSIVESATEVNLSRHDSSVATAFAQPPSTARSVSMRDMGTEM 272

Query:   299 TPVASQEPSRTATPVGAXXXXXXXXXXXXXXXRGRAPASTPMEQTGIDESQHPVENSKRD 358
             TP+ASQEPSR  TP+ A                 R+P S+     G   S  P+ N  ++
Sbjct:   273 TPIASQEPSRNGTPIRATTPI-------------RSPISSEPSSPGRQASASPMSN--KE 317

Query:   359 LSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRA 418
             LSE+E++ KTRREI+ LG QLGK NIAAWASK+++ K+ S++ K     +  +   E RA
Sbjct:   318 LSEKELQMKTRREIMVLGTQLGKFNIAAWASKEDEDKDASTSLKTKASLQTSKSVSEARA 377

Query:   419 SAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKIS 478
             +AW EAEK+KH+ARF+REE+KIQAWE+ QKAK EAEM++ E +VE+I+ +AQ +++KK++
Sbjct:   378 TAWEEAEKAKHMARFRREEMKIQAWENHQKAKSEAEMKKTEVKVERIKGRAQDRLMKKLA 437

Query:   479 MSRQXXXXXXXXXXXXXXXXXXXTAAQGEYIRQTGQIPSSHFTC 522
                +                   T  Q E IR+TG++PS  F+C
Sbjct:   438 TIERKAEEKRAAAEAKKDHQAAKTEKQAEQIRRTGKVPSLLFSC 481

GO:0003677 "DNA binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2008625 AT1G67590 "AT1G67590" [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 7.2e-25, Sum P(2) = 7.2e-25
 Identities = 44/124 (35%), Positives = 79/124 (63%)

Query:   397 TSSAEK-NSDMEELERIE-YEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAE 454
             ++++EK N  +E  + +   E RA AW EAE++K +AR+KREE+KIQAWE+ +K K E E
Sbjct:   210 SNNSEKVNGFVESKKAMSAMEARAMAWDEAERAKFMARYKREEVKIQAWENHEKRKAEME 269

Query:   455 MRRIEAEVEQIRAQAQAKMVKKISMSRQXXXXXXXXXXXXXXXXXXXTAAQGEYIRQTGQ 514
             M+++E + E+++A+A+ K+  K++ +++                   T+ + +YIR++G 
Sbjct:   270 MKKMEVKAERMKARAEEKLANKLAATKRIAEERRANAEAKLNEKAVKTSEKADYIRRSGH 329

Query:   515 IPSS 518
             +PSS
Sbjct:   330 LPSS 333

GO:0003677 "DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2197081 AT1G53860 "AT1G53860" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
 Identities = 54/214 (25%), Positives = 105/214 (49%)

Query:   274 KSSSENESVVPAIRSVCMRD----MGTEMTPVASQEPSRTATPVGAXXXXXXXXXXXXXX 329
             K ++E   ++P+      +D    +  E   V  ++     TP+G+              
Sbjct:   187 KLANEVPQILPSTEGFIFKDSDKFLRYEEAQVQHRDMGTEMTPIGSVTTSRCHTPF---- 242

Query:   330 XRGRAPA--STPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAW 387
              +  +PA  +TP + +G      P+  +K  +   E ++K R    +       +  + W
Sbjct:   243 -KSSSPARHNTPSQLSG------PLTETKNVIDISEFEDKLRLSGSSTSQYCYSVT-SHW 294

Query:   388 ASKDEQGKNTSSAEKNSDME-ELERIEYEKRASAWA-EAEKSKHIARFKREEIKIQAWES 445
              S++E+ +  S + ++ DME EL R   E +A  W  E +K K   R++REE KIQAW +
Sbjct:   295 NSREEEEEEISKSLRHFDMESELRRSVSESKAPLWDDEDDKIKFCQRYQREEAKIQAWVN 354

Query:   446 RQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISM 479
              + AK EA+ R++E +++++R+  + K++K++ M
Sbjct:   355 LENAKAEAQSRKLEVKIQKMRSNLEEKLMKRMDM 388

GO:0003677 "DNA binding" evidence=ISS

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2050704 AT2G45820 "AT2G45820" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 41/135 (30%), Positives = 65/135 (48%)

Query:   395 KNTSSAEKNSDMEELERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKL 451
             K  SS   + D+  L  +E EK+ S   AW E+EKSK   R +++   + AWE+ +KA +
Sbjct:    60 KKASSGSADRDVI-LADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAV 118

Query:   452 EAEMRRIEAEVEQIRAQAQAKMVKKISMSRQXXXXXXXXXXXXXXXXXXXTAAQGEYIRQ 511
             EA++R+IE ++E+ +AQ   KM  K++   +                       G   R 
Sbjct:   119 EAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRA 178

Query:   512 TGQIPSSHFTCCGWF 526
             TG +P +    CG F
Sbjct:   179 TGVVPKA---TCGCF 190

GO:0003677 "DNA binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2115085 AT4G36970 "AT4G36970" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
 Identities = 31/102 (30%), Positives = 59/102 (57%)

Query:   381 KMNIAAWASKDEQGKNTSSAEKNSDMEELE-RIEYEKRASAWAEAEKSKHIARFKREEIK 439
             KM+  A   K  + +  SS     +  E+E   E    +S+W  +E +  +++ +REE K
Sbjct:   265 KMDKGARMIKRPKRRVMSSRIIRREQPEVEDNSEASASSSSWDISEPAMTLSKLQREEAK 324

Query:   440 IQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSR 481
             I AWE+ QKAK EA +R++E ++E+ ++ +  K++ K+  ++
Sbjct:   325 IAAWENLQKAKAEAAIRKLEVKLEKKKSASMDKILNKLQTAK 366

GO:0003677 "DNA binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2101303 AT3G48940 "AT3G48940" [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 36/136 (26%), Positives = 62/136 (45%)

Query:   388 ASKDEQGKNTSSAEKNSDMEELERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWE 444
             A +  + K   S  +++    L R+E +KR S   AW EAEKSK   + +++   + AWE
Sbjct:    40 AKEPTEDKKVGSVHRDA---VLVRLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWE 96

Query:   445 SRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQXXXXXXXXXXXXXXXXXXXTAA 504
             + +KA +EAE+++IE ++ + +A    +M  KI+   +                      
Sbjct:    97 NSKKASVEAELKKIEEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEE 156

Query:   505 QGEYIRQTGQIPSSHF 520
                  R TG  P+  F
Sbjct:   157 MAAKYRATGTAPTKLF 172

GO:0003677 "DNA binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0048765 "root hair cell differentiation" evidence=RCA

UNIPROTKB|P93788 P93788 "Remorin" [Solanum tuberosum (taxid:4113)]

 Score = 136 (52.9 bits), Expect = 3.4e-07, P = 3.4e-07
 Identities = 30/74 (40%), Positives = 49/74 (66%)

Query:   409 LERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQI 465
             L R+  EKR S   AW E+EKSK   + +++   I AWE+ +KA LEAE++++E ++E+ 
Sbjct:    81 LARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKK 140

Query:   466 RAQAQAKMVKKISM 479
             +A+   KM  KI++
Sbjct:   141 KAEYTEKMKNKIAL 154

GO:0005886 "plasma membrane" evidence=IDA

GO:0007267 "cell-cell signaling" evidence=NAS

GO:0048032 "galacturonate binding" evidence=IDA

TAIR|locus:2098921 AT3G61260 [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 47/196 (23%), Positives = 91/196 (46%)

Query:   335 PASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQG 394
             PA  P E      +  P + +K D++E++I+     +I      L    +     ++   
Sbjct:    26 PAPAPAEIPAPAPAPTPADVTK-DVAEEKIQNPPPEQIFDDSKAL---TVVEKPVEEPAP 81

Query:   395 KNTSSAEKNSDMEELERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKL 451
                +SA  + D++ L  +  EKR S   AW E+EKSK   + +++   + AWE+ +KA +
Sbjct:    82 AKPASASLDRDVK-LADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAV 140

Query:   452 EAEMRRIEAEVEQIRAQAQAKMVKKIS-MSRQXXXXXXXXXXXXXXXXXXXTAAQGEYIR 510
             EA++++IE ++E+ +A+   +M  K++ + ++                        +Y R
Sbjct:   141 EAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKY-R 199

Query:   511 QTGQIPSSHFTCCGWF 526
              TG +P +    CG F
Sbjct:   200 ATGIVPKA---TCGCF 212

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2172793 AT5G23750 "AT5G23750" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 37/134 (27%), Positives = 62/134 (46%)

Query:   392 EQGKNTSSAEKNSDMEELERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQK 448
             E+ K   S  +++    L R+E EKR S   AW EAEK K   + +++   I +WE+ +K
Sbjct:    71 EEEKKEGSVNRDA---VLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKK 127

Query:   449 AKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQXXXXXXXXXXXXXXXXXXXTAAQGEY 508
             A +EAE++++E ++E+ +A+   +M  KI+   +                          
Sbjct:   128 AAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAK 187

Query:   509 IRQTGQIPSSHFTC 522
              R TG  P   F C
Sbjct:   188 YRATGTAPKKLFGC 201

GO:0003677 "DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0042546 "cell wall biogenesis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	526
pfam03763	112	pfam03763, Remorin_C, Remorin, C-terminal region	1e-30
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-04
COG3064	387	COG3064, TolA, Membrane protein involved in colici	2e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	3e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	3e-04
PRK09510	387	PRK09510, tolA, cell envelope integrity inner memb	0.001
COG2268	548	COG2268, COG2268, Uncharacterized protein conserve	0.002
PRK11448	1123	PRK11448, hsdR, type I restriction enzyme EcoKI su	0.003
TIGR02794	346	TIGR02794, tolA_full, TolA protein	0.004

>gnl|CDD|190741 pfam03763, Remorin_C, Remorin, C-terminal region

 Score =  115 bits (289), Expect = 1e-30
 Identities = 47/111 (42%), Positives = 78/111 (70%)

Query: 410 ERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQA 469
           ++ E E RA AW EAEK+K   +++REE KIQAWE+++KAK EAE+++IE ++E+ +A+A
Sbjct: 2   KKSEAESRADAWEEAEKAKINNKYQREEAKIQAWENKKKAKAEAELKKIERKLEKKKAEA 61

Query: 470 QAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHF 520
             K+  K++ + +++EEKRA AEA++  +  +   +   IR TG++PS   
Sbjct: 62  AEKLKNKLAAAHKKAEEKRATAEAKRGEEEAKAEEKAAKIRATGKLPSKLS 112

Remorins are plant-specific plasma membrane-associated proteins. In tobacco remorin co-purifies with lipid rafts. Most remorins have a variable, proline-rich C-half and a more conserved N-half that is predicted to form coiled coils. Consistent with this, circular dichroism studies have demonstrated that much of the protein is alpha-helical. Remorins exist in plasma membrane preparations as oligomeric structures and form filaments in vitro. The proteins can bind polyanions including the extracellular matrix component oligogalacturonic acid (OGA). In vitro, remorin in plasma membrane preparations is phosphorylated (principally on threonine residues) in the presence of OGA and thus co-purifies with a protein kinases(s). The biological functions of remorins are unknown but roles as components of the membrane/cytoskeleton are possible. Length = 112

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 44.4 bits (104), Expect = 2e-04
 Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 9/168 (5%)

Query: 347  ESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDM 406
            E+    E +K+D  E +  E+ R        +  +M   A      + +    A++    
Sbjct: 1227 EAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKA 1286

Query: 407  EELERIEYEKRASAWAEAEKSKHIARFKR--EEIKIQAWESRQKA---KLEAEMRRIEAE 461
            EE ++ +  K+A    +A+++K  A   +  +E K +A E+++KA   K +AE  +  AE
Sbjct: 1287 EEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAE 1346

Query: 462  VEQIRAQAQAKMVK----KISMSRQRSEEKRAAAEARKSRDAERTAAQ 505
              +  A+A A   +    K   + ++ EE +  A+A K +  E+  A 
Sbjct: 1347 AAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKAD 1394

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 44.0 bits (103), Expect = 2e-04
 Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 5/164 (3%)

Query: 341  EQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSA 400
            E+   DE++   E +K+    ++  E+ +++  A   +  +   AA A+K E       A
Sbjct: 1300 EKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEA 1359

Query: 401  EKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEA 460
            E   +  E    + E+ A   A+A K K   + K +E K +A E ++KA    E+++  A
Sbjct: 1360 EAAEEKAEAAEKKKEE-AKKKADAAKKKAEEKKKADEAKKKAEEDKKKAD---ELKKAAA 1415

Query: 461  EVEQI-RAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTA 503
              ++   A+ +A+  KK   +++++EE + A EA+K  +  + A
Sbjct: 1416 AKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKA 1459

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 44.0 bits (103), Expect = 2e-04
 Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 8/125 (6%)

Query: 388  ASKDEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQ 447
            A K E+ KN +   K  + ++ E    E+    + E +K K     K EE KI+A E ++
Sbjct: 1569 AKKAEEDKNMA-LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKK 1627

Query: 448  ----KAKLEAEMRRIEAEV---EQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAE 500
                K K+E   ++   E    E+++   +   +K    +++  E+K+ A EA+K+ + E
Sbjct: 1628 AEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687

Query: 501  RTAAQ 505
            + AA+
Sbjct: 1688 KKAAE 1692

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 44.0 bits (103), Expect = 2e-04
 Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 4/165 (2%)

Query: 341  EQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSA 400
            E+   DE++   E  K D ++++ +E  + +      +  K    A   K E+ K  + A
Sbjct: 1288 EKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEA 1347

Query: 401  EKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEA 460
             K     E    E E        AEK K  A+ K +  K +A E ++  + + +    + 
Sbjct: 1348 AKAE--AEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKK 1405

Query: 461  EVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQ 505
            + ++++  A AK  KK   +++++EEK+ A EA+K  +  + A +
Sbjct: 1406 KADELKKAAAAK--KKADEAKKKAEEKKKADEAKKKAEEAKKADE 1448

Length = 2084

>gnl|CDD|225606 COG3064, TolA, Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane]

 Score = 43.4 bits (102), Expect = 2e-04
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 2/155 (1%)

Query: 353 ENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERI 412
           E   +  +EQE  ++  +E +    Q  +   A   ++ EQ +    A K +   E ++ 
Sbjct: 91  ELKPKQAAEQERLKQLEKERLKAQEQQKQAEEAEKQAQLEQKQQEEQARKAA--AEQKKK 148

Query: 413 EYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAK 472
               +A A AEA K K  A  K++  +        KAK EA   + +AE E   A  +AK
Sbjct: 149 AEAAKAKAAAEAAKLKAAAEAKKKAEEAAKAAEEAKAKAEAAAAKKKAEAEAKAAAEKAK 208

Query: 473 MVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGE 507
              +     ++  E  A  +A   +      A+ +
Sbjct: 209 AEAEAKAKAEKKAEAAAEEKAAAEKKKAAAKAKAD 243

Length = 387

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 43.6 bits (102), Expect = 3e-04
 Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 11/182 (6%)

Query: 333  RAPASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRR---------EIVALGVQLGKMN 383
            +A  +   E+  I+E     E  K+  +E+  K +  +         E     V+  K  
Sbjct: 1582 KAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKK 1641

Query: 384  IAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAW 443
             A    K E+ K      K    EE ++ E +K+ +   EA+K++   +   E +K +A 
Sbjct: 1642 EAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAE--EAKKAEEDEKKAAEALKKEAE 1699

Query: 444  ESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTA 503
            E+++  +L+ +    + + E+++   +   +K     ++  E+K+ A EA+K  + ++  
Sbjct: 1700 EAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKI 1759

Query: 504  AQ 505
            A 
Sbjct: 1760 AH 1761

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 43.2 bits (101), Expect = 3e-04
 Identities = 35/168 (20%), Positives = 76/168 (45%), Gaps = 7/168 (4%)

Query: 347  ESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDM 406
            E     E +++    ++ +   + E V    +L K   A  A    + +    AE+    
Sbjct: 1161 EDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKA 1220

Query: 407  EELERIE-------YEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIE 459
            E+ ++ E        +K A    +AE+ ++    ++ E    A  +R++A ++AE  R  
Sbjct: 1221 EDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKA 1280

Query: 460  AEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGE 507
             E+++   + +A   KK    ++  E K+ A EA+K+ +A++ A + +
Sbjct: 1281 DELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAK 1328

Length = 2084

>gnl|CDD|236545 PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional

 Score = 41.3 bits (97), Expect = 0.001
 Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 15/132 (11%)

Query: 387 WASKDEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIA--RFKREEIKIQAWE 444
           +  + +Q K+   AE+    +E ++ E E +    AE E+ K +   R   +E K QA E
Sbjct: 64  YNRQQQQQKSAKRAEEQRKKKEQQQAE-ELQQKQAAEQERLKQLEKERLAAQEQKKQAEE 122

Query: 445 SRQKAKLE-----------AEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSE-EKRAAAE 492
           + ++A L+           A   + +AE E  RA A AK     +  +  +E  K+AAAE
Sbjct: 123 AAKQAALKQKQAEEAAAKAAAAAKAKAEAEAKRAAAAAKKAAAEAKKKAEAEAAKKAAAE 182

Query: 493 ARKSRDAERTAA 504
           A+K  +AE  A 
Sbjct: 183 AKKKAEAEAAAK 194

Length = 387

>gnl|CDD|225177 COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown]

 Score = 40.2 bits (94), Expect = 0.002
 Identities = 33/176 (18%), Positives = 67/176 (38%), Gaps = 22/176 (12%)

Query: 345 IDESQHPVENSKRDLSEQE---IKEKTRREIVALGVQLGKMNIAAWASK-DEQGKNTSSA 400
            +++Q   E       E     +    R++   L  Q     I A   +  E+ K  ++ 
Sbjct: 302 EEKAQAEQEVQHAKALEAREMRVGLIERQKETELEPQERSYFINAAQRQAQEEAKAAANI 361

Query: 401 EKNSDMEELERIEYEKRASAWAEAEKSKHI-----ARFKREEIKIQAWESRQKAKLEAEM 455
            +    +    +E  +       AE++  +     A  ++ EI ++A  ++ +A+ +A  
Sbjct: 362 AEAIGAQAEAAVETARETEEAERAEQAALVAAAEAAEQEQVEIAVRAEAAKAEAEAQAAE 421

Query: 456 RRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQ 511
            + EAE  + + +A+A             E KRA AEA +       A   + + Q
Sbjct: 422 IKAEAEAIREKGKAEA-------------EAKRALAEAIQVLGDAAAAELFKALVQ 464

Length = 548

>gnl|CDD|236912 PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional

 Score = 40.3 bits (95), Expect = 0.003
 Identities = 18/100 (18%), Positives = 48/100 (48%), Gaps = 11/100 (11%)

Query: 398 SSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRR 457
                ++  +E+  ++ +    A    EK++  A  + ++ ++ A E    A+LE + + 
Sbjct: 140 PENLLHALQQEVLTLKQQLELQA---REKAQSQALAEAQQQELVALE-GLAAELEEKQQE 195

Query: 458 IEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSR 497
           +EA++EQ++ +A          S++R ++++   +    R
Sbjct: 196 LEAQLEQLQEKAAET-------SQERKQKRKEITDQAAKR 228

Length = 1123

>gnl|CDD|234017 TIGR02794, tolA_full, TolA protein

 Score = 39.0 bits (91), Expect = 0.004
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 9/108 (8%)

Query: 408 ELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQ--- 464
           E  R +  ++ +A  +A K    A  + EE + QA E++ K   EA+  + EAE E+   
Sbjct: 87  EQARQKELEQRAAAEKAAKQAEQAAKQAEEKQKQAEEAKAKQAAEAK-AKAEAEAEKKAK 145

Query: 465 --IRAQAQAKMVKK---ISMSRQRSEEKRAAAEARKSRDAERTAAQGE 507
              + QA+ +   K    +  +    +K+A AEA+   +A+  A   E
Sbjct: 146 EEAKKQAEEEAKAKAAAEAKKKAAEAKKKAEAEAKAKAEAKAKAKAEE 193

TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB [Transport and binding proteins, Other, Cellular processes, Pathogenesis]. Length = 346

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	526
PF03763	111	Remorin_C: Remorin, C-terminal region ; InterPro:	100.0
PF03763	111	Remorin_C: Remorin, C-terminal region ; InterPro:	96.65
PRK09174	204	F0F1 ATP synthase subunit B'; Validated	83.88

>PF03763 Remorin_C: Remorin, C-terminal region ; InterPro: IPR005516 Remorin binds both simple and complex galaturonides

Probab=100.00  E-value=4.8e-35  Score=258.50  Aligned_cols=110  Identities=51%  Similarity=0.742  Sum_probs=107.4

Q ss_pred             HHHHHHhhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009768          411 RIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAA  490 (526)
Q Consensus       411 k~~~EsrAaAWEeAEkaK~~~RyqREEaKI~AWEN~QKAKAEA~mrKiE~KLEkkRA~a~EK~~NKLA~a~rkAEEkRA~  490 (526)
                      +..++++++|||++|++|+++||+|++++|++|||+||+|||++|+|+|++||+||++++|||+|+|+.||++||++|++
T Consensus         2 ~~~~~a~a~aWe~ae~aK~~~r~~ree~~I~aWEn~qkaKaea~m~k~E~klEkkra~a~ek~~nkia~~~~~Aee~Ra~   81 (111)
T PF03763_consen    2 KEEVEAKADAWEEAEKAKINNRYEREEAKIQAWENLQKAKAEAEMRKIEEKLEKKRAKALEKMKNKIARAHKKAEEKRAA   81 (111)
T ss_pred             cHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhHHHHHHHHHHHHhhcCCCCCCCC
Q 009768          491 AEARKSRDAERTAAQGEYIRQTGQIPSSHF  520 (526)
Q Consensus       491 AEA~r~ee~~Ka~EkA~kiR~TGk~Pss~f  520 (526)
                      ++++|++++++++++|++||+||++|++||
T Consensus        82 aea~r~~~~~k~~ekA~~~R~tG~~P~~~f  111 (111)
T PF03763_consen   82 AEARRGEEIAKAEEKAAKIRATGKVPSKCF  111 (111)
T ss_pred             HHHHHhhHHHhHHHHHHHHHhCCCCCcccC
Confidence            999999999999999999999999999765

The N-terminal region of remorin is proline rich, while the C-terminal region has been predicted to form a coiled-coil, that is expected to interact with other macromolecules, most likely DNA. Functional similarities between the behavior of the proteins and viral proteins involved in intercellular communication have been noted [].

>PF03763 Remorin_C: Remorin, C-terminal region ; InterPro: IPR005516 Remorin binds both simple and complex galaturonides

Probab=96.65  E-value=0.034  Score=50.10  Aligned_cols=79  Identities=27%  Similarity=0.352  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhc
Q 009768          434 KREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQT  512 (526)
Q Consensus       434 qREEaKI~AWEN~QKAKAEA~mrKiE~KLEkkRA~a~EK~~NKLA~a~rkAEEkRA~AEA~r~ee~~Ka~EkA~kiR~T  512 (526)
                      +..+++|.+||..+++|+....++.|.++.-==..--.|..-+|..+..+.|.+|+.+.++-.+.+..+..+|+-.|..
T Consensus         3 ~~~~a~a~aWe~ae~aK~~~r~~ree~~I~aWEn~qkaKaea~m~k~E~klEkkra~a~ek~~nkia~~~~~Aee~Ra~   81 (111)
T PF03763_consen    3 EEVEAKADAWEEAEKAKINNRYEREEAKIQAWENLQKAKAEAEMRKIEEKLEKKRAKALEKMKNKIARAHKKAEEKRAA   81 (111)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3468999999999999999999999987742222222333445666778899999999999999999988888887764

The N-terminal region of remorin is proline rich, while the C-terminal region has been predicted to form a coiled-coil, that is expected to interact with other macromolecules, most likely DNA. Functional similarities between the behavior of the proteins and viral proteins involved in intercellular communication have been noted [].

>PRK09174 F0F1 ATP synthase subunit B'; Validated

Probab=83.88  E-value=27  Score=34.57  Aligned_cols=44  Identities=34%  Similarity=0.291  Sum_probs=23.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 009768          460 AEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTA  503 (526)
Q Consensus       460 ~KLEkkRA~a~EK~~NKLA~a~rkAEEkRA~AEA~r~ee~~Ka~  503 (526)
                      ...+..+..+.+.+...++.++...+..|..+...-...+..++
T Consensus       134 ~~~e~~~~~a~~ea~~~l~~Ae~~I~~ek~~A~~el~~~a~e~A  177 (204)
T PRK09174        134 AKAEAERAAIEASLEKKLKEAEARIAAIKAKAMADVGSIAEETA  177 (204)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444555555555556666666555555555555544444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	526
2zuo_A	861	MVP, major vault protein; repeat domains, protein-	1e-08
2zuo_A	861	MVP, major vault protein; repeat domains, protein-	1e-04
2zuo_A	861	MVP, major vault protein; repeat domains, protein-	2e-04
2zuo_A	861	MVP, major vault protein; repeat domains, protein-	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	6e-04

>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861

 Score = 56.7 bits (136), Expect = 1e-08
 Identities = 26/170 (15%), Positives = 65/170 (38%), Gaps = 1/170 (0%)

Query: 338 TPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNT 397
           + ++   ++       ++ +   +  I+  T  +  A   +  ++   A   + E+ K  
Sbjct: 636 SSVDVQSVEPVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEA-RGRLERQKIL 694

Query: 398 SSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRR 457
             +E     +EL  +E    A       K++  +R +   I+ +    + K K +A    
Sbjct: 695 DQSEAEKARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIE 754

Query: 458 IEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGE 507
            EAE+E+++   + +++   +       + +  A     +  E T A G 
Sbjct: 755 TEAELERVKKVREMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALGP 804

>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861

 Score = 43.6 bits (102), Expect = 1e-04
 Identities = 24/185 (12%), Positives = 55/185 (29%), Gaps = 10/185 (5%)

Query: 334 APASTPMEQ---TGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASK 390
           A AS   +          +  V   +             +           + ++   S 
Sbjct: 582 AVASVTFDDFHKNSARIIRMAVFGFEMSEDTGPDGTLLPKARDQAVFPQNGLVVS---SV 638

Query: 391 DEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAK 450
           D Q            ++   ++  E        ++++      +R E + +    RQK  
Sbjct: 639 DVQSVEPVDQRTRDALQRSVQLAIEITT----NSQEAAAKHEAQRLEQEARGRLERQKIL 694

Query: 451 LEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIR 510
            ++E  +   E+ ++ A + A      + +   S  + A  E   S    +  AQ   I 
Sbjct: 695 DQSEAEKARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIE 754

Query: 511 QTGQI 515
              ++
Sbjct: 755 TEAEL 759

>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861

 Score = 43.3 bits (101), Expect = 2e-04
 Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 5/156 (3%)

Query: 361 EQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRASA 420
            Q     +  ++ ++     +   A   S     + T+++++ +   E +R+E E R   
Sbjct: 629 PQNGLVVSSVDVQSVEPVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRL 688

Query: 421 -----WAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVK 475
                  ++E  K        E    A ES   AK EAE R   A +E   +  QAK+  
Sbjct: 689 ERQKILDQSEAEKARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKA 748

Query: 476 KISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQ 511
           +       +E +R            R   + E  + 
Sbjct: 749 QALAIETEAELERVKKVREMELIYARAQLELEVSKA 784

>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861

 Score = 42.9 bits (100), Expect = 2e-04
 Identities = 35/192 (18%), Positives = 60/192 (31%), Gaps = 12/192 (6%)

Query: 331 RGRAPASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASK 390
           +   P             Q  +E +          E  R E  A G +L +  I   +  
Sbjct: 641 QSVEPVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARG-RLERQKILDQSEA 699

Query: 391 DEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWE------ 444
           ++  K     E  S   E      +  A + AEA + +      + ++K QA        
Sbjct: 700 EKARKELLELEAMSMAVESTGNA-KAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAE 758

Query: 445 -SRQKAKLEAEMRRI--EAEVEQIRAQAQAKM-VKKISMSRQRSEEKRAAAEARKSRDAE 500
             R K   E E+     + E+E  +AQ  A +  KK     +          A    + +
Sbjct: 759 LERVKKVREMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALGPGTIRDLAVAGPEMQ 818

Query: 501 RTAAQGEYIRQT 512
               Q   ++ T
Sbjct: 819 VKLLQSLGLKST 830

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 4e-04
 Identities = 64/476 (13%), Positives = 120/476 (25%), Gaps = 167/476 (35%)

Query: 9   SKLRMKLIGPHHNRKKDGSNSNSARTSP--------SRLDDSEFVRNSLLNGGFDDEAPS 60
           S ++ +   P    +      +              SRL     +R +LL       A +
Sbjct: 96  SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE---LRPAKN 152

Query: 61  LEVASEKGAGEVVLG----HNQGEQASFQPNE----TLPRENTEVSRVKMQQFSKGDSVN 112
           + +    G+G+  +      +   Q      +     L   N+  + ++M Q        
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKM-DFKIFWLNLKNCNSPETVLEMLQ-------- 203

Query: 113 LSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARS-FSRPMPSKWNDAEKWIM 171
                         L Y               +   N  +RS  S  +  + +  +  + 
Sbjct: 204 -------------KLLY---------------QIDPNWTSRSDHSSNIKLRIHSIQAEL- 234

Query: 172 NRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASH 231
            R +    Y  +N L      L       V+       +    V+  + K          
Sbjct: 235 RRLLKSKPY--ENCL------L-------VL------LN----VQ--NAK---------- 257

Query: 232 TLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRS-VC 290
               F+                 SC        ++ T    T+     + +  A  + + 
Sbjct: 258 AWNAFNL----------------SCK-------ILLT----TRFKQVTDFLSAATTTHIS 290

Query: 291 MRDMGTEMTPVASQE-------------PSRTATPVGATTPLRSPTSSIPSTPRGRAPAS 337
           +      +TP   +              P    T    T P R   S I  + R      
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT----TNPRR--LSIIAESIRDGLATW 344

Query: 338 TPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAA------WASKD 391
              +    D+    +E+S   L   E     R+    L V     +I        W    
Sbjct: 345 DNWKHVNCDKLTTIIESSLNVLEPAEY----RKMFDRLSVFPPSAHIPTILLSLIWFDVI 400

Query: 392 EQG--------KNTSSAEKNSDME--ELERIEYEKRASAWAEAEKSKH---IARFK 434
           +             S  EK        +  I  E +     E E + H   +  + 
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK--LENEYALHRSIVDHYN 454

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 40.1 bits (93), Expect = 6e-04
 Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 23/101 (22%)

Query: 400 AEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIE 459
           A+ +   +E E I        W E E+ K +   + +           + +   + ++  
Sbjct: 75  AQADRLTQEPESIR------KWRE-EQRKRLQ--ELDAA-----SKVMEQEWREKAKK-- 118

Query: 460 AEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAE 500
            ++E+   +   ++ K    +R       A     +  DA+
Sbjct: 119 -DLEEWNQRQSEQVEKNKINNRI------ADKAFYQQPDAD 152

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00