Citrus Sinensis ID: 010023

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520
MEAANNTNGNGYGNNYECDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPLASHADLEPYIQRIADGDTASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFRLAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTATTHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSFTGLYRYRLGDVVEVAVLNQCCHEMDVSFVDPGYVVSRRTNSIGPLELCIVKRGAFRMILDYFVGNGAALSQFKTPRCTSNQVLVRILNDWTIKRFHSTAYC
cccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccHHHHHHHcccccccccccccHHHHHHccccccccccHHHHHHHHccccccccccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccccccccEEEcccccccccHHHHHHHcccccccccHHHHHccccHHHHHHHHHHccccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccccccccEEEEEccccHHHHHHHHHHHHcccccccccccccccEEEEEccccccccccEEEEccccEEEEEEEccccccccccccccccccccccccccccccEEEEEEEEcccEEEEEEccEEEEEEEEccccccEEEEEccccEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHccccccccccccc
ccccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccHHHHHHHccccccccccccccHHHHHHcccEEEHHHHHHHHHHHHccccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccccccEcccccEccccccHHHcccccccccccccccHEEEcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHccccHHHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHccccEEEEEEEcccHHHHHHHHHHHcccccEEcccccccccEEEEEcccccccccEEEEEEcccEEEEEEEccccccccccccccccccccEEEEEEEEccEEEEEEEEcccEEEEEcccEEEEEccccccccEEEEEEEccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccccHHHHHHHHHcHHHHccccccc
meaanntngngygnnyecDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRlgdtkiqdmDACEMETLYTSLvplashadlepyiqriadgdtaslltqepitklslssgttegrqkyvpftkhssqTTLQIFRLAAAYrsrvypireggRILEFIYSSkqfktkggltagtatthyyaseefkikqektksftcspeevissgeykqsTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDvregslsssritlPKMRKAVLdtispkpylaSKIEVACKKLesldwfglvpklwpnakYVYSIMTGSMQHYLKKLRHYAgdlplvsadygsteswigvnvdpslppedvtfaviptfsyfefipihrrkqdcnsaiddfiedepvplsqvklgqEYEIVLTSFtglyryrlgdVVEVAVLNQCchemdvsfvdpgyvvsrrtnsigplelCIVKRGAFRMILDYFVgngaalsqfktprctsnQVLVRILNDwtikrfhstayc
meaanntngngygnnyECDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKkrlgdtkiqDMDACEMETLYTSLVPLASHADLEPYIQRIADGDTASLLTQEPitklslssgttegRQKYvpftkhssqttLQIFRLAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTATTHYYASEefkikqektksfTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVRegslsssritlpKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSFTGLYRYRLGDVVEVAVLNQCCHEMDVSFVDPGYVVSRrtnsigplelCIVKRGAFRMILDYFVGNGAALsqfktprctsnqVLVRilndwtikrfhstayc
MEAAnntngngygnnyECDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPLASHADLEPYIQRIADGDTASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFRLAAAYRSRVYPIREGGRILEFIYSSKQFktkggltagtattHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSFTGLYRYRLGDVVEVAVLNQCCHEMDVSFVDPGYVVSRRTNSIGPLELCIVKRGAFRMILDYFVGNGAALSQFKTPRCTSNQVLVRILNDWTIKRFHSTAYC
**********GYGNNYECDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPLASHADLEPYIQRIADGDTASLLT*******************YVPFTKHSSQTTLQIFRLAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTATTHYYASEEFKIK******FTCS*EEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSFTGLYRYRLGDVVEVAVLNQCCHEMDVSFVDPGYVVSRRTNSIGPLELCIVKRGAFRMILDYFVGNGAALSQFKTPRCTSNQVLVRILNDWTIKRFHS****
************GNNYECDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPLASHADLEPYIQRIADGDTASLLTQEPITKLS************VPFTKHSSQTTLQIFRLAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTATTHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSFTGLYRYRLGDVVEVAVLNQCCHEMDVSFVDPGYVVSRRTNSIGPLELCIVKRGAFRMILDYFVGNGAALSQFKTPRCTSNQVLVRILNDWTIKRFH**AYC
********GNGYGNNYECDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPLASHADLEPYIQRIADGDTASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFRLAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTATTHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSFTGLYRYRLGDVVEVAVLNQCCHEMDVSFVDPGYVVSRRTNSIGPLELCIVKRGAFRMILDYFVGNGAALSQFKTPRCTSNQVLVRILNDWTIKRFHSTAYC
***********YGNNYECDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPLASHADLEPYIQRIADGDTASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFRLAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTATTHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHR******SAIDD*IEDEPVPLSQVKLGQEYEIVLTSFTGLYRYRLGDVVEVAVLNQCCHEMDVSFVDPGYVVSRRTNSIGPLELCIVKRGAFRMILDYFVGNGAALSQFKTPRCTSNQVLVRILNDWTIKRFHSTAYC
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEAANNTNGNGYGNNYECDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPLASHADLEPYIQRIADGDTASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFRLAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTATTHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSFTGLYRYRLGDVVEVAVLNQCCHEMDVSFVDPGYVVSRRTNSIGPLELCIVKRGAFRMILDYFVGNGAALSQFKTPRCTSNQVLVRILNDWTIKRFHSTAYC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query520 2.2.26 [Sep-21-2011]
Q6I581581 Probable indole-3-acetic yes no 0.796 0.712 0.501 1e-122
Q9SKE2575 Jasmonic acid-amido synth no no 0.763 0.690 0.483 1e-115
Q5NAZ7462 Probable indole-3-acetic no no 0.75 0.844 0.492 1e-110
Q53P49613 Probable indole-3-acetic no no 0.775 0.657 0.449 1e-108
O81829612 Indole-3-acetic acid-amid no no 0.773 0.656 0.363 4e-73
Q9LSQ4612 Indole-3-acetic acid-amid no no 0.775 0.658 0.353 1e-70
Q8LQM5 610 Probable indole-3-acetic no no 0.8 0.681 0.341 1e-67
Q9FZ87609 Indole-3-acetic acid-amid no no 0.775 0.661 0.335 1e-66
Q60EJ6 629 Probable indole-3-acetic no no 0.759 0.627 0.345 2e-66
Q9LYU4575 4-substituted benzoates-g no no 0.742 0.671 0.355 4e-66
>sp|Q6I581|GH35_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.5 OS=Oryza sativa subsp. japonica GN=GH3.5 PE=2 SV=1 Back     alignment and function desciption
 Score =  437 bits (1124), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/427 (50%), Positives = 299/427 (70%), Gaps = 13/427 (3%)

Query: 19  DIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVP 78
           + I  FE ++ +A  VQ++TL++ILE N   EYL+   G     D ++      Y S +P
Sbjct: 8   ETINEFEMLTRDAARVQKDTLKKILEINASAEYLQN-FGLGGRTDAES------YKSCIP 60

Query: 79  LASHADLEPYIQRIADGDTASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFR 138
           L  H D+EPYIQRI DGDT+ ++T EPIT LSLSSGTT G+ K++PF     +TTLQI+R
Sbjct: 61  LCVHNDIEPYIQRIVDGDTSPVVTGEPITNLSLSSGTTHGKPKFIPFNDELLETTLQIYR 120

Query: 139 LAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTATTHYYASEEFKIKQEKTKSFT 198
            + A+R+R YPI +G + L+F+Y SKQ  TKGG+ A TATT+ Y  + +K   +  +S  
Sbjct: 121 TSYAFRNREYPIGQG-KALQFVYGSKQVITKGGILATTATTNLYRRQRYKEGMKDIQSQC 179

Query: 199 CSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVR 258
           CSP+EVI   ++ QS YCHLL GL +S++V  + STFA+S+V AF  FEE W+D+C D+R
Sbjct: 180 CSPDEVIFGPDFHQSLYCHLLCGLIYSEEVHSVFSTFAHSLVHAFQTFEEVWEDLCTDIR 239

Query: 259 EGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYS 318
           +G LS  ++T P +R+AV   + P P LA  I   C  L   +W+G++P LWPNAKYVY 
Sbjct: 240 DGVLSK-KVTAPSIREAVSKILKPNPELADSIYKKCIGLS--NWYGVIPALWPNAKYVYG 296

Query: 319 IMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEF 378
           IMTGSM+ YLKKLRHYAG+LPL+SADYG++E W+G N+DP++PPE VT+AV+P   YFEF
Sbjct: 297 IMTGSMEPYLKKLRHYAGNLPLISADYGASEGWVGSNIDPTVPPEQVTYAVLPQVGYFEF 356

Query: 379 IPIHR--RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSFTGLYRYRLGDVVEVAVL 436
           IP+ +   ++  NSA   +IE +PV L++V++G+ YE+V+T+F GLYRYRLGDVV++A  
Sbjct: 357 IPLEKPIGEETENSASIHYIESDPVGLTEVEVGKIYEVVITNFAGLYRYRLGDVVKIARF 416

Query: 437 NQCCHEM 443
           +    E+
Sbjct: 417 HNSTPEL 423
May catalyze the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: -
>sp|Q9SKE2|JAR1_ARATH Jasmonic acid-amido synthetase JAR1 OS=Arabidopsis thaliana GN=JAR1 PE=1 SV=2 Back     alignment and function description
>sp|Q5NAZ7|GH33_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.3 OS=Oryza sativa subsp. japonica GN=GH3.3 PE=2 SV=2 Back     alignment and function description
>sp|Q53P49|GH312_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.12 OS=Oryza sativa subsp. japonica GN=GH3.12 PE=2 SV=1 Back     alignment and function description
>sp|O81829|GH35_ARATH Indole-3-acetic acid-amido synthetase GH3.5 OS=Arabidopsis thaliana GN=GH3.5 PE=1 SV=1 Back     alignment and function description
>sp|Q9LSQ4|GH36_ARATH Indole-3-acetic acid-amido synthetase GH3.6 OS=Arabidopsis thaliana GN=GH3.6 PE=1 SV=1 Back     alignment and function description
>sp|Q8LQM5|GH31_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Oryza sativa subsp. japonica GN=GH3.1 PE=2 SV=1 Back     alignment and function description
>sp|Q9FZ87|GH317_ARATH Indole-3-acetic acid-amido synthetase GH3.17 OS=Arabidopsis thaliana GN=GH3.17 PE=1 SV=1 Back     alignment and function description
>sp|Q60EJ6|GH34_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.4 OS=Oryza sativa subsp. japonica GN=GH3.4 PE=2 SV=1 Back     alignment and function description
>sp|Q9LYU4|GH312_ARATH 4-substituted benzoates-glutamate ligase GH3.12 OS=Arabidopsis thaliana GN=GH3.12 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query520
255553847600 Indole-3-acetic acid-amido synthetase GH 0.832 0.721 0.819 0.0
224127132595 GH3 family protein [Populus trichocarpa] 0.840 0.734 0.784 0.0
346680625590 indole-3-acetic acid-amido synthetase GH 0.807 0.711 0.805 0.0
225447231592 PREDICTED: probable indole-3-acetic acid 0.830 0.729 0.787 0.0
118487591595 unknown [Populus trichocarpa] 0.826 0.722 0.788 0.0
224124584595 GH3 family protein [Populus trichocarpa] 0.826 0.722 0.784 0.0
356544912613 PREDICTED: probable indole-3-acetic acid 0.798 0.676 0.790 0.0
356515202611 PREDICTED: probable indole-3-acetic acid 0.798 0.679 0.774 0.0
356542133 653 PREDICTED: probable indole-3-acetic acid 0.819 0.652 0.752 0.0
356547024599 PREDICTED: probable indole-3-acetic acid 0.813 0.706 0.741 0.0
>gi|255553847|ref|XP_002517964.1| Indole-3-acetic acid-amido synthetase GH3.5, putative [Ricinus communis] gi|223542946|gb|EEF44482.1| Indole-3-acetic acid-amido synthetase GH3.5, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/437 (81%), Positives = 393/437 (89%), Gaps = 4/437 (0%)

Query: 1   MEAANNTNGNGYGNNYEC---DIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLG 57
           ME+ ++ + NG GNN  C   DIIRWF+ +SENAG+VQ  TLRRILE N  VEYLKK LG
Sbjct: 1   MESTSSPSSNGNGNNGHCSSYDIIRWFDDVSENAGKVQTGTLRRILELNCGVEYLKKWLG 60

Query: 58  DTKIQDMDACEMETLYTSLVPLASHADLEPYIQRIADGDTASLLTQEPITKLSLSSGTTE 117
           D KIQ+MDAC +E+LYTSLVPLASHADL+PYIQRIADGDT  LLTQ+PI  LSLSSGTTE
Sbjct: 61  DIKIQEMDACALESLYTSLVPLASHADLDPYIQRIADGDTTPLLTQQPIATLSLSSGTTE 120

Query: 118 GRQKYVPFTKHSSQTTLQIFRLAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTA 177
           GRQKYVPFT+HSSQTTLQIF LAAAYRSRVYPI+EGG+ILE IYSSKQFKTKGGLT GTA
Sbjct: 121 GRQKYVPFTRHSSQTTLQIFSLAAAYRSRVYPIKEGGKILELIYSSKQFKTKGGLTVGTA 180

Query: 178 TTHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAY 237
           TTHYYASEEFKIKQEKTKSFTCSP EVIS G+YKQ+TYCHLLLGLFF DQVEFITSTFAY
Sbjct: 181 TTHYYASEEFKIKQEKTKSFTCSPPEVISGGDYKQTTYCHLLLGLFFYDQVEFITSTFAY 240

Query: 238 SIVQAFTAFEECWQDICIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKL 297
           SIVQAF +FEE W++IC D+REGSL SSRITLPKMRKAVLD ISP P LAS+IE  CKKL
Sbjct: 241 SIVQAFISFEELWKEICDDIREGSL-SSRITLPKMRKAVLDIISPSPCLASRIEDNCKKL 299

Query: 298 ESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVD 357
           E+LDW GL+PKLWPNAKYVYSIMTGSMQ YL+KLRHYA  L LVSADYGSTESWIGVNVD
Sbjct: 300 ENLDWLGLIPKLWPNAKYVYSIMTGSMQPYLRKLRHYACGLALVSADYGSTESWIGVNVD 359

Query: 358 PSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLT 417
           PSLPPE+VTFAV+PTFSYFEF+P++R+ +D +SAIDDFIEDEPVPLS+VKLGQEYEIVLT
Sbjct: 360 PSLPPENVTFAVVPTFSYFEFMPLYRQNKDFSSAIDDFIEDEPVPLSKVKLGQEYEIVLT 419

Query: 418 SFTGLYRYRLGDVVEVA 434
           +FTGLYRYRLGDVVEVA
Sbjct: 420 TFTGLYRYRLGDVVEVA 436

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224127132|ref|XP_002329408.1| GH3 family protein [Populus trichocarpa] gi|222870458|gb|EEF07589.1| GH3 family protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|346680625|gb|AEO45116.1| indole-3-acetic acid-amido synthetase GH3.5 [Betula platyphylla] Back     alignment and taxonomy information
>gi|225447231|ref|XP_002272560.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Vitis vinifera] gi|297739258|emb|CBI28909.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|118487591|gb|ABK95621.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224124584|ref|XP_002319368.1| GH3 family protein [Populus trichocarpa] gi|222857744|gb|EEE95291.1| GH3 family protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356544912|ref|XP_003540891.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5-like [Glycine max] Back     alignment and taxonomy information
>gi|356515202|ref|XP_003526290.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5-like [Glycine max] Back     alignment and taxonomy information
>gi|356542133|ref|XP_003539525.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5-like [Glycine max] Back     alignment and taxonomy information
>gi|356547024|ref|XP_003541918.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6I581GH35_ORYSJ6, ., 3, ., 2, ., -0.50110.79610.7125yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.3.2LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GH3-11
GH3 family protein (595 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query520
pfam03321513 pfam03321, GH3, GH3 auxin-responsive promoter 1e-114
PLN02620612 PLN02620, PLN02620, indole-3-acetic acid-amido syn 1e-90
PLN02247606 PLN02247, PLN02247, indole-3-acetic acid-amido syn 8e-84
PLN02249597 PLN02249, PLN02249, indole-3-acetic acid-amido syn 2e-72
PLN02247606 PLN02247, PLN02247, indole-3-acetic acid-amido syn 3e-11
PLN02249597 PLN02249, PLN02249, indole-3-acetic acid-amido syn 3e-09
PLN02620612 PLN02620, PLN02620, indole-3-acetic acid-amido syn 4e-09
>gnl|CDD|217492 pfam03321, GH3, GH3 auxin-responsive promoter Back     alignment and domain information 
 Score =  346 bits (890), Expect = e-114
 Identities = 150/422 (35%), Positives = 216/422 (51%), Gaps = 63/422 (14%)

Query: 19  DIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVP 78
            +++  E  + NA EVQ E LR ILE+N D EY KK  G + I   D       +   VP
Sbjct: 1   KVLKEIELFTSNAVEVQEEVLREILERNADTEYGKK-YGFSGITSYDD------FKKRVP 53

Query: 79  LASHADLEPYIQRIADGDTASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFR 138
           + ++ DL+PYI+RIA+G+  S+L   PIT  +LSSGTT G+ K++P T    +    +  
Sbjct: 54  VVTYEDLKPYIERIANGEP-SILWPGPITYFALSSGTTGGKSKFIPVTDELLERFHFLGA 112

Query: 139 LAAA--YRSRVYPIRE---GGRILEFIYSSKQFKTKGGLTAGTATTHYYASEEFKIKQEK 193
           LA    Y +   P          L   +   + KT GG+ AG  +T  Y +  F  K   
Sbjct: 113 LAVLLLYLNNNPPGLFFEGKSLGLGGSFVKPELKTPGGIPAGDLSTILYRNLPFWFK--- 169

Query: 194 TKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDI 253
                 SP+EVI   +  QS YC LL GL   + V  I+   A+ +V      E+ W+++
Sbjct: 170 ---LYTSPDEVILCIDDWQSKYCALLCGLI-REDVGRISGVPAWMLVLLIRFLEKHWKEL 225

Query: 254 CIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNA 313
           C D+R G+L                   P P LA  IE  C K+        + +LWPN 
Sbjct: 226 CTDIRTGTLR------------------PNPELADLIEQECSKI--------IKELWPNL 259

Query: 314 KYVYSIMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTF 373
           KYV+    GSM+ Y  KL    G LPL S  Y ++E + G+N+D    PEDV++ ++P  
Sbjct: 260 KYVFVWGGGSMEPYRPKLEKLLGGLPLYSETYAASEGFFGINLD----PEDVSYTLMPNS 315

Query: 374 SYFEFIPIHRRKQDCNSAIDDFIEDEP--VPLSQVKLGQEYEIVLTSFTGLYRYRLGDVV 431
            +FEFIP           +D+  +++P  V L +V+LG+ YE+V+T+F GLYRYR+GDVV
Sbjct: 316 GFFEFIP-----------VDEDGDEDPKIVDLVEVELGKNYELVITTFAGLYRYRIGDVV 364

Query: 432 EV 433
            V
Sbjct: 365 RV 366

Length = 513
>gnl|CDD|166261 PLN02620, PLN02620, indole-3-acetic acid-amido synthetase Back     alignment and domain information
>gnl|CDD|165890 PLN02247, PLN02247, indole-3-acetic acid-amido synthetase Back     alignment and domain information
>gnl|CDD|177891 PLN02249, PLN02249, indole-3-acetic acid-amido synthetase Back     alignment and domain information
>gnl|CDD|165890 PLN02247, PLN02247, indole-3-acetic acid-amido synthetase Back     alignment and domain information
>gnl|CDD|177891 PLN02249, PLN02249, indole-3-acetic acid-amido synthetase Back     alignment and domain information
>gnl|CDD|166261 PLN02620, PLN02620, indole-3-acetic acid-amido synthetase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 520
PLN02620612 indole-3-acetic acid-amido synthetase 100.0
PLN02247606 indole-3-acetic acid-amido synthetase 100.0
PLN02249597 indole-3-acetic acid-amido synthetase 100.0
PF03321528 GH3: GH3 auxin-responsive promoter; InterPro: IPR0 100.0
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.78
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 99.73
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.67
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 99.66
PRK06334539 long chain fatty acid--[acyl-carrier-protein] liga 97.89
PRK09274552 peptide synthase; Provisional 97.82
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 97.75
PRK04813503 D-alanine--poly(phosphoribitol) ligase subunit 1; 97.74
PRK13295547 cyclohexanecarboxylate-CoA ligase; Reviewed 97.68
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 97.63
PRK07529632 AMP-binding domain protein; Validated 97.63
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 97.6
PRK07788549 acyl-CoA synthetase; Validated 97.6
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 97.59
PRK06060 705 acyl-CoA synthetase; Validated 97.59
PRK07638487 acyl-CoA synthetase; Validated 97.55
PLN02574560 4-coumarate--CoA ligase-like 97.54
PRK05677562 long-chain-fatty-acid--CoA ligase; Validated 97.53
PRK06145497 acyl-CoA synthetase; Validated 97.52
PRK05605573 long-chain-fatty-acid--CoA ligase; Validated 97.5
PRK06155542 crotonobetaine/carnitine-CoA ligase; Provisional 97.49
PRK04319570 acetyl-CoA synthetase; Provisional 97.48
PRK09088488 acyl-CoA synthetase; Validated 97.47
PRK00174637 acetyl-CoA synthetase; Provisional 97.46
PRK06164540 acyl-CoA synthetase; Validated 97.46
PRK07786542 long-chain-fatty-acid--CoA ligase; Validated 97.45
PRK07514504 malonyl-CoA synthase; Validated 97.44
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 97.43
PRK08316523 acyl-CoA synthetase; Validated 97.43
PRK05852534 acyl-CoA synthetase; Validated 97.42
PRK10946536 entE enterobactin synthase subunit E; Provisional 97.4
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 97.39
PRK06839496 acyl-CoA synthetase; Validated 97.39
COG1022613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 97.35
TIGR01734502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 97.33
PRK12467 3956 peptide synthase; Provisional 97.31
TIGR02188625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 97.29
PRK08180614 feruloyl-CoA synthase; Reviewed 97.28
PRK12583558 acyl-CoA synthetase; Provisional 97.28
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 97.27
PRK086331146 2-acyl-glycerophospho-ethanolamine acyltransferase 97.26
PRK07867529 acyl-CoA synthetase; Validated 97.25
PLN02860563 o-succinylbenzoate-CoA ligase 97.24
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 97.22
PRK13382537 acyl-CoA synthetase; Provisional 97.21
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 97.21
PLN02614666 long-chain acyl-CoA synthetase 97.18
PRK08974560 long-chain-fatty-acid--CoA ligase; Validated 97.17
PRK07787471 acyl-CoA synthetase; Validated 97.17
PLN02736651 long-chain acyl-CoA synthetase 97.15
PRK08314546 long-chain-fatty-acid--CoA ligase; Validated 97.14
COG1021542 EntE Peptide arylation enzymes [Secondary metaboli 97.13
PRK12467 3956 peptide synthase; Provisional 97.11
PRK123165163 peptide synthase; Provisional 97.1
PRK08279600 long-chain-acyl-CoA synthetase; Validated 97.09
PLN02330546 4-coumarate--CoA ligase-like 1 97.06
PRK07470528 acyl-CoA synthetase; Validated 97.06
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 97.04
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 97.03
PTZ00237647 acetyl-CoA synthetase; Provisional 97.01
PRK13388540 acyl-CoA synthetase; Provisional 97.0
PRK08751560 putative long-chain fatty acyl CoA ligase; Provisi 96.98
PRK10524629 prpE propionyl-CoA synthetase; Provisional 96.98
PRK12406509 long-chain-fatty-acid--CoA ligase; Provisional 96.96
PLN02861660 long-chain-fatty-acid-CoA ligase 96.96
PRK12316 5163 peptide synthase; Provisional 96.93
PRK03640483 O-succinylbenzoic acid--CoA ligase; Provisional 96.89
PRK13383516 acyl-CoA synthetase; Provisional 96.89
PRK12582624 acyl-CoA synthetase; Provisional 96.8
PLN02387696 long-chain-fatty-acid-CoA ligase family protein 96.77
PTZ00342746 acyl-CoA synthetase; Provisional 96.75
PRK08315559 AMP-binding domain protein; Validated 96.74
PRK06710563 long-chain-fatty-acid--CoA ligase; Validated 96.74
TIGR02316628 propion_prpE propionate--CoA ligase. This family c 96.71
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 96.71
PRK08308414 acyl-CoA synthetase; Validated 96.68
PRK05857540 acyl-CoA synthetase; Validated 96.65
PRK05691 4334 peptide synthase; Validated 96.51
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 96.51
COG0318534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 96.5
PRK06188524 acyl-CoA synthetase; Validated 96.45
PLN02654666 acetate-CoA ligase 96.44
PLN02430660 long-chain-fatty-acid-CoA ligase 96.4
TIGR02262508 benz_CoA_lig benzoate-CoA ligase family. Character 96.36
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 96.34
PRK05691 4334 peptide synthase; Validated 96.3
PRK07769631 long-chain-fatty-acid--CoA ligase; Validated 96.29
PLN03051499 acyl-activating enzyme; Provisional 96.28
PLN02246537 4-coumarate--CoA ligase 96.28
PRK05620576 long-chain-fatty-acid--CoA ligase; Validated 96.19
PRK06087547 short chain acyl-CoA synthetase; Reviewed 96.19
PTZ00216700 acyl-CoA synthetase; Provisional 95.96
COG0365528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 95.94
PRK08276502 long-chain-fatty-acid--CoA ligase; Validated 95.93
PRK07008539 long-chain-fatty-acid--CoA ligase; Validated 95.9
PLN03102579 acyl-activating enzyme; Provisional 95.88
PRK08043718 bifunctional acyl-[acyl carrier protein] synthetas 95.64
PRK03584655 acetoacetyl-CoA synthetase; Provisional 95.59
PRK06018542 putative acyl-CoA synthetase; Provisional 95.1
PRK068141140 acylglycerophosphoethanolamine acyltransferase; Pr 95.1
KOG1179649 consensus Very long-chain acyl-CoA synthetase/fatt 95.03
PRK07768545 long-chain-fatty-acid--CoA ligase; Validated 94.94
PRK05850578 acyl-CoA synthetase; Validated 94.86
TIGR01217652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 94.77
KOG1180678 consensus Acyl-CoA synthetase [Lipid transport and 93.06
KOG1176537 consensus Acyl-CoA synthetase [Lipid transport and 90.69
PRK13390501 acyl-CoA synthetase; Provisional 87.46
PRK13391511 acyl-CoA synthetase; Provisional 87.23
KOG1256691 consensus Long-chain acyl-CoA synthetases (AMP-for 87.16
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 87.1
PRK07798533 acyl-CoA synthetase; Validated 86.61
PRK07868994 acyl-CoA synthetase; Validated 84.88
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 83.1
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information 
Probab=100.00  E-value=8.5e-120  Score=978.72  Aligned_cols=495  Identities=36%  Similarity=0.676  Sum_probs=464.0

Q ss_pred             CCCccHHHHHHHHHHHhcHHHHHHHHHHHHHHhccCChHHHHhhcCccCCCCCCCcChHHhhhcCCCCCcccchHHHHHH
Q 010023           13 GNNYECDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPLASHADLEPYIQRI   92 (520)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~~~~~~~~~~~~i~s~edFr~~VPl~~Yed~~pyier~   92 (520)
                      +++.++..++.++..++||.++|+++|++||++|++|+|||+|       +|++|+++++||++|||++|||++|||+||
T Consensus        17 ~~~~~~~~l~~ie~~t~~~~~vQ~~vL~~IL~~n~~Teyg~~~-------~f~~i~~~~~F~~~VPv~~Yedl~pyI~Ri   89 (612)
T PLN02620         17 LAEKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRH-------GLNGRTDRETFKKVMPVITYEDIQPDINRI   89 (612)
T ss_pred             cccchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhc-------CCCCCCCHHHHHHhCCCccHHHhHHHHHHH
Confidence            4455577789999999999999999999999999999999999       999999999999999999999999999999


Q ss_pred             hcCCCCCcccccccceeeccccCCCCccceeecChhhHHHHHHHHHHHHHHHHhcCC-CCCCCcEEEEeecCccccccCC
Q 010023           93 ADGDTASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFRLAAAYRSRVYP-IREGGRILEFIYSSKQFKTKGG  171 (520)
Q Consensus        93 ~~Ge~~~ll~~~pi~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p-~~~~gk~l~~~~~~~~~~t~~G  171 (520)
                      ++||.++|||++||.+|++|||||+|++|+||+|+++++.++.++.+|..++++.+| +. .||.|||++...+.+|++|
T Consensus        90 ~~Ge~s~vL~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~~~~~~~~~~~p~l~-~Gk~~~~~~~~~~~~T~~G  168 (612)
T PLN02620         90 ANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLE-KGKGMYFLFIKSEAKTPGG  168 (612)
T ss_pred             HcCCCCCccCCCChhhhhhcCCCCCCceeeeecCHHHHHHHHHHHHHHHHHHHhhCCCcc-cCcEEEEEecccCccCCCC
Confidence            999977999999999999999999889999999999999988889999999999888 77 8999999999999999999


Q ss_pred             ceEecCccccccchhHHhhhhhhhcccCCchhhhccCchhhhHHHHHhhccccCCCccEEEecchHHHHHHHHHHHHHHH
Q 010023          172 LTAGTATTHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQ  251 (520)
Q Consensus       172 ip~g~~S~~~~~~~~f~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~~L~~~~~l~~i~~~f~~~ll~~~~~l~~~w~  251 (520)
                      +|+|++|+.++++.+|+.++......|++|.+++.++|..|++||||||+|+++++|..|+++|+++|+.++++|+++|+
T Consensus       169 ip~g~~st~~y~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~v~~v~svfa~~ll~a~~~Le~~w~  248 (612)
T PLN02620        169 LVARPVLTSYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWT  248 (612)
T ss_pred             cccccccchhhhhhhhhhcccccccceeCcHHhccCCCHHHHHHHHHHHHhhcchhhceEEeechHHHHHHHHHHHHHHH
Confidence            99999999999999999888777778999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcccCCCCCCCcHHHHHhhhccCCCCHHHHHHHHHHhcccccCCccCcccCCCCCCceEEEEEcCChHHHHHHH
Q 010023          252 DICIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLKKL  331 (520)
Q Consensus       252 ~l~~dI~~g~~~~~~i~~~~~R~~l~~~l~~~p~~A~~L~~~~~~~~~~~~~gi~~~lWP~L~~i~~~~tG~~~~y~~~l  331 (520)
                      +||+||++|+++ ++++++++|++|.+.++|||++|+.|+++|.+ +  +|.|++++|||||++|+||+||+|++|+++|
T Consensus       249 ~L~~DI~~G~ls-~~itd~~~R~av~~~L~p~pelA~~i~~~c~~-~--~w~gii~rLWP~lk~I~~~~tGsm~~Y~p~L  324 (612)
T PLN02620        249 LLCRDIRTGTID-SQITDPSVREAVMKILKPDPKLADFVEAECRK-E--SWQGIITRLWPNTKYVDVIVTGTMSQYIPTL  324 (612)
T ss_pred             HHHHHHhcCCCC-ccCCCHHHHHHHHhhcCCCHHHHHHHHHHhcc-c--cccCcHHHhCCCCcEEEEECCCCHHHHHHHH
Confidence            999999999999 88999999999999999999999999999998 5  8999999999999999999999999999999


Q ss_pred             HhHhCCCCcccCccccCcceeeecCCCCCCCCCceeeeeCCceEEEEeeCCccccCC-----CCCCCCCCCCCccccCCC
Q 010023          332 RHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDC-----NSAIDDFIEDEPVPLSQV  406 (520)
Q Consensus       332 ~~~~g~~pi~~~~Y~aSEg~igi~~~~~~p~~~~~~~l~p~~~ffEFip~~~~~~~~-----~~~~~~~~~~~~l~l~el  406 (520)
                      +.|+|++|+++.+|+||||+||||++|.|+++.++|+|+|+++||||||+++.+..-     +...+..+++++|+++||
T Consensus       325 ~~y~gglpl~~~~Y~ASE~~~ginl~P~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ev  404 (612)
T PLN02620        325 DYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVDLVDV  404 (612)
T ss_pred             HHHcCCCccccccccccceEEEeccCCCCCcccceeeecCCcEEEEEeeccCcccccccccccccccccccCccccHHHc
Confidence            999999999999999999999999999999988999999999999999987532100     000111346789999999


Q ss_pred             CCCCeEEEEEeecccccceecCCeEeee----------------------------------------------------
Q 010023          407 KLGQEYEIVLTSFTGLYRYRLGDVVEVA----------------------------------------------------  434 (520)
Q Consensus       407 e~G~~YelViTt~~GLyRYriGDvVrv~----------------------------------------------------  434 (520)
                      |+|++|||||||.+||||||+||||+|+                                                    
T Consensus       405 ~~G~~YelvvTt~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~dy  484 (612)
T PLN02620        405 KLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDASLTEY  484 (612)
T ss_pred             cCCCeEEEEEEecCceEEEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHHHHhhcccCceeeeE
Confidence            9999999999999999999999999999                                                    


Q ss_pred             ------------------------------hHHHHHhhhhccCCChhhHhhhhcC-CCCCcEEEEeccchHHHHHHHHHh
Q 010023          435 ------------------------------VLNQCCHEMDVSFVDPGYVVSRRTN-SIGPLELCIVKRGAFRMILDYFVG  483 (520)
Q Consensus       435 ------------------------------~l~~~c~~ld~~l~n~~Y~~~R~~g-~l~pl~v~iv~~g~F~~~~~~~~~  483 (520)
                                                    ++++||.++|++| |.+|+.+|..| +||||+|++|++|+|+++++++++
T Consensus       485 ts~~d~~~~PghYvl~~El~~~~~~~~~~~~l~~cc~~lE~~L-n~~Yr~~R~~~~sIgPLeirvv~~GtF~~l~~~~~~  563 (612)
T PLN02620        485 TSYADTSTIPGHYVLFWELCLNGSTPIPPSVFEDCCLTIEESL-NSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAIS  563 (612)
T ss_pred             EeccccCCCCCceEEEEEEecCCCCCCCHHHHHHHHHHHHHHh-CHHHHHHHhcCCcCCCcEEEEeCCChHHHHHHHHHH
Confidence                                          4567888899998 99999999886 699999999999999999999999


Q ss_pred             CCCCCCCCCCCcccCCHHHHHHHhhccccccccccCC
Q 010023          484 NGAALSQFKTPRCTSNQVLVRILNDWTIKRFHSTAYC  520 (520)
Q Consensus       484 ~G~~~~Q~K~Pr~~~~~~~~~~l~~~~~~~~~~~~~~  520 (520)
                      +|++.+|||+|||+++++++++|+++|+++|||++++
T Consensus       564 ~G~s~~QyK~Pr~v~~~~~~~~l~~~v~~~~~s~~~~  600 (612)
T PLN02620        564 LGASINQYKTPRCVKFAPIIELLNSRVVSNYFSPKCP  600 (612)
T ss_pred             cCCccccccCceEecCHHHHHHHHhhhheeeccccCC
Confidence            9999999999999999999999999999999999763

>PLN02247 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02249 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query520
4epl_A581 Crystal Structure Of Arabidopsis Thaliana Gh3.11 (J 1e-111
4epl_A581 Crystal Structure Of Arabidopsis Thaliana Gh3.11 (J 1e-15
4ewv_A581 Crystal Structure Of Gh3.12 In Complex With Ampcpp 2e-63
4ewv_A581 Crystal Structure Of Gh3.12 In Complex With Ampcpp 2e-09
4b2g_A 609 Crystal Structure Of An Indole-3-acetic Acid Amido 7e-62
4b2g_A609 Crystal Structure Of An Indole-3-acetic Acid Amido 2e-09
4eq4_A581 Crystal Structure Of Seleno-Methionine Derivatized 6e-61
4eq4_A581 Crystal Structure Of Seleno-Methionine Derivatized 3e-08
>pdb|4EPL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Gh3.11 (Jar1) In Complex With Ja-Ile Length = 581 Back     alignment and structure 
Iteration: 1

 Score =  399 bits (1025), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/414 (46%), Positives = 277/414 (66%), Gaps = 17/414 (4%)
Query: 20  IIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPL 79
           +I  F+ ++ NA +VQ++TL+ IL +N    YL+   G     + +A + E  + S+VPL
Sbjct: 19  VIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQN-CG----LNGNATDPEEAFKSMVPL 73
Query: 80  ASHADLEPYIQRIADGDTASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFRL 139
            +  +LEPYI+R+ DGDT+ +LT  P+  +SLSSGT++GR K++PFT    + TLQ+FR 
Sbjct: 74  VTDVELEPYIKRMVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRT 133
Query: 140 AAAYRSRVYPIREGGRILEFIYSSKQFXXXXXXXXXXXXXHYYASEEFKIKQEKTKSFTC 199
           A A+R+R +PI + G+ L+FI+SSKQ+             + Y +  FK   +   S +C
Sbjct: 134 AFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKAGMKSITSPSC 193
Query: 200 SPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVRE 259
           SP+EVI S +  Q+ YCHLL G+ F DQV+++ + FA+ +V AF  FE+ W++I  D+++
Sbjct: 194 SPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKD 253
Query: 260 GSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSI 319
           G L S+RIT+P +R A+   ++P P LA  I   C  L   +W+GL+P L+PNAKYVY I
Sbjct: 254 GVL-SNRITVPSVRTAMSKLLTPNPELAETIRTKCMSLS--NWYGLIPALFPNAKYVYGI 310
Query: 320 MTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFI 379
           MTGSM+ Y+ KLRHYAGDLPLVS DYGS+E WI  NV P L PE+ TFAVIP   YFEF+
Sbjct: 311 MTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFL 370
Query: 380 PIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSFTGLYRYRLGDVVEV 433
           P+    +          E++PV L+QVK+G+EYE+V+T++ GLYRYRLGDVV+V
Sbjct: 371 PVSETGEG---------EEKPVGLTQVKIGEEYEVVITNYAGLYRYRLGDVVKV 415
>pdb|4EPL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Gh3.11 (Jar1) In Complex With Ja-Ile Length = 581 Back     alignment and structure
>pdb|4EWV|A Chain A, Crystal Structure Of Gh3.12 In Complex With Ampcpp Length = 581 Back     alignment and structure
>pdb|4EWV|A Chain A, Crystal Structure Of Gh3.12 In Complex With Ampcpp Length = 581 Back     alignment and structure
>pdb|4B2G|A Chain A, Crystal Structure Of An Indole-3-acetic Acid Amido Synthase From Vitis Vinifera Involved In Auxin Homeostasis Length = 609 Back     alignment and structure
>pdb|4B2G|A Chain A, Crystal Structure Of An Indole-3-acetic Acid Amido Synthase From Vitis Vinifera Involved In Auxin Homeostasis Length = 609 Back     alignment and structure
>pdb|4EQ4|A Chain A, Crystal Structure Of Seleno-Methionine Derivatized Gh3.12 Length = 581 Back     alignment and structure
>pdb|4EQ4|A Chain A, Crystal Structure Of Seleno-Methionine Derivatized Gh3.12 Length = 581 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query520
4epl_A581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 4e-97
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 1e-82
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 3e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-07
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Length = 581 Back     alignment and structure
 Score =  305 bits (780), Expect = 4e-97
 Identities = 198/428 (46%), Positives = 284/428 (66%), Gaps = 19/428 (4%)

Query: 20  IIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKR-LGDTKIQDMDACEMETLYTSLVP 78
           +I  F+ ++ NA +VQ++TL+ IL +N    YL+   L        +A      + S+VP
Sbjct: 19  VIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATDPEEA------FKSMVP 72

Query: 79  LASHADLEPYIQRIADGDTASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFR 138
           L +  +LEPYI+R+ DGDT+ +LT  P+  +SLSSGT++GR K++PFT    + TLQ+FR
Sbjct: 73  LVTDVELEPYIKRMVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFR 132

Query: 139 LAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTATTHYYASEEFKIKQEKTKSFT 198
            A A+R+R +PI + G+ L+FI+SSKQ+ + GG+  GTATT+ Y +  FK   +   S +
Sbjct: 133 TAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKAGMKSITSPS 192

Query: 199 CSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVR 258
           CSP+EVI S +  Q+ YCHLL G+ F DQV+++ + FA+ +V AF  FE+ W++I  D++
Sbjct: 193 CSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIK 252

Query: 259 EGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYS 318
           +G L S+RIT+P +R A+   ++P P LA  I   C  +   +W+GL+P L+PNAKYVY 
Sbjct: 253 DGVL-SNRITVPSVRTAMSKLLTPNPELAETIRTKC--MSLSNWYGLIPALFPNAKYVYG 309

Query: 319 IMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEF 378
           IMTGSM+ Y+ KLRHYAGDLPLVS DYGS+E WI  NV P L PE+ TFAVIP   YFEF
Sbjct: 310 IMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEF 369

Query: 379 IPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSFTGLYRYRLGDVVEVAVLNQ 438
           +P+               E++PV L+QVK+G+EYE+V+T++ GLYRYRLGDVV+V     
Sbjct: 370 LPVSE---------TGEGEEKPVGLTQVKIGEEYEVVITNYAGLYRYRLGDVVKVIGFYN 420

Query: 439 CCHEMDVS 446
              ++   
Sbjct: 421 NTPQLKFI 428
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Length = 581 Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Length = 581 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query520
4epl_A581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 100.0
4b2g_A609 GH3-1 auxin conjugating enzyme; signaling protein, 100.0
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 100.0
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 99.56
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 99.56
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 99.52
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.33
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 98.2
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 98.13
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 98.1
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 98.05
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 98.02
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 98.02
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 97.96
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 97.95
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 97.93
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 97.82
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 97.79
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 97.79
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 97.71
3rg2_A 617 Enterobactin synthase component E (ENTE), 2,3-DIH 97.7
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 97.66
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 97.66
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 97.63
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 97.63
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 97.61
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 97.61
4gr5_A570 Non-ribosomal peptide synthetase; MBTH-like domain 97.57
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 97.57
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 97.43
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 97.4
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 97.27
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 97.26
4dg8_A620 PA1221; ANL superfamily, adenylation domain, pepti 97.25
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 97.17
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 97.17
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 96.93
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 96.88
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 96.42
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
Probab=100.00  E-value=4e-119  Score=980.30  Aligned_cols=492  Identities=48%  Similarity=0.884  Sum_probs=449.2

Q ss_pred             CCCcCCCccHHHHHHHHHHHhcHHHHHHHHHHHHHHhccCChHHHHhhcCccCCCCCCC-cChH-HhhhcCCCCCcccch
Q 010023            9 GNGYGNNYECDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDAC-EMET-LYTSLVPLASHADLE   86 (520)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~~~~~~~~~~~~i-~s~e-dFr~~VPl~~Yed~~   86 (520)
                      ..++..+.+++.++.|++.++||.++|+++|++||++|++|+|||+|       ||++| ++++ +||++|||++|||++
T Consensus         8 ~~~~~~~~~~~~~~~~e~~~~~~~~vQ~~vL~~iL~~n~~Teygk~~-------gf~~i~~~~e~dF~~~VPi~~Yedl~   80 (581)
T 4epl_A            8 LEKVETFDMNRVIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNC-------GLNGNATDPEEAFKSMVPLVTDVELE   80 (581)
T ss_dssp             -----CCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCHHHHTT-------TCC----CHHHHHHHHSCCBCHHHHH
T ss_pred             hhcccccccHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCHHHHhc-------CCCcccCCHHHHHHHhCCCccHHHHH
Confidence            35678888999999999999999999999999999999999999999       99999 9999 999999999999999


Q ss_pred             HHHHHHhcCCCCCcccccccceeeccccCCCCccceeecChhhHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEeecCccc
Q 010023           87 PYIQRIADGDTASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFRLAAAYRSRVYPIREGGRILEFIYSSKQF  166 (520)
Q Consensus        87 pyier~~~Ge~~~ll~~~pi~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~  166 (520)
                      ||||||++||.++|||++||.+|++|||||+|++|+||+|+++++.+++++.+|..++++..++...||.|+|++++++.
T Consensus        81 pyIeRi~~Ge~~~iL~~~pi~~f~~SSGTT~gk~K~IP~T~~~l~~~~~~~~~~~~~~~~~p~l~~~Gk~L~l~~~s~~~  160 (581)
T 4epl_A           81 PYIKRMVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQY  160 (581)
T ss_dssp             HHHHHHHTTCCSSSSSSSCCSEEEEEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHSCCCTTCEEEEECCCCCCE
T ss_pred             HHHHHHHCCCCCCccCCCCcceEEecCCCCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCccccCCcEEEEeecCCcc
Confidence            99999999998899999999999999999999999999999999998778888878887633333259999988899999


Q ss_pred             cccCCceEecCccccccchhHHhhhhhhhcccCCchhhhccCchhhhHHHHHhhccccCCCccEEEecchHHHHHHHHHH
Q 010023          167 KTKGGLTAGTATTHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAF  246 (520)
Q Consensus       167 ~t~~Gip~g~~S~~~~~~~~f~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~~L~~~~~l~~i~~~f~~~ll~~~~~l  246 (520)
                      +|++|+|+|++|++++++.+|+..|.++...|++|.+++.++|..+++||||||||+++++|.+|+++||++|+++++.|
T Consensus       161 ~t~~Gi~~G~~S~~~~~s~~f~~~p~~~~~~~t~P~e~i~~~D~~~~~Y~~Ll~~L~~~~~v~~i~a~fas~ll~~~~~l  240 (581)
T 4epl_A          161 ISTGGVPVGTATTNVYRNPNFKAGMKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTF  240 (581)
T ss_dssp             ECTTSCEEECHHHHHHTSTTHHHHHGGGSCCBSSCHHHHTCSCHHHHHHHHHHHHHHTGGGEEEEEEEEHHHHHHHHHHH
T ss_pred             cCCCCceeeechhhhhhcchhhcCchhhhhcccCCHHHhcCCCHHHHHHHHHHHhhhccccccEEeeccHHHHHHHHHHH
Confidence            99999999999999999999999999988899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCcHHHHHhhhccCCCCHHHHHHHHHHhcccccCCccCcccCCCCCCceEEEEEcCChHH
Q 010023          247 EECWQDICIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQH  326 (520)
Q Consensus       247 ~~~w~~l~~dI~~g~~~~~~i~~~~~R~~l~~~l~~~p~~A~~L~~~~~~~~~~~~~gi~~~lWP~L~~i~~~~tG~~~~  326 (520)
                      +++|+++|+||++|+++ ++++++++|++++++|+|+|++|++|+++|++.+  +|.|++++|||||++|.||+||+|++
T Consensus       241 ~~~We~l~~dI~~gtl~-~~it~~~~R~~l~~v~~p~~~~a~~l~~~~~~~~--~~~g~i~~lWPnl~~i~~~~~G~~~~  317 (581)
T 4epl_A          241 EQVWEEIVTDIKDGVLS-NRITVPSVRTAMSKLLTPNPELAETIRTKCMSLS--NWYGLIPALFPNAKYVYGIMTGSMEP  317 (581)
T ss_dssp             HHHHHHHHHHHHHTCCC-TTCCCHHHHHHHHTTCCCCHHHHHHHHHHHHHSS--TTTTHHHHHCTTCCCEEEECSGGGGG
T ss_pred             HHHHHHHHHHHHhcCCC-cCCCCHHHHHHHhCCCCCCHHHHHHHHHHhCCCC--ccccCHHHhCCCCceEEEEeCCChHH
Confidence            99999999999999999 8899999999999999999999999999999811  39999999999999999999999999


Q ss_pred             HHHHHHhHhCCCCcccCccccCcceeeecCCCCCCCCCceeeeeCCceEEEEeeCCccccCCCCCCCCCCCCCccccCCC
Q 010023          327 YLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQV  406 (520)
Q Consensus       327 y~~~l~~~~g~~pi~~~~Y~aSEg~igi~~~~~~p~~~~~~~l~p~~~ffEFip~~~~~~~~~~~~~~~~~~~~l~l~el  406 (520)
                      |+++|++|+|++|+++++|+||||+||||++|.+|++.++|+|+|+.+||||||+++.++         +++++++++||
T Consensus       318 Y~~~l~~~~g~~p~~~~~Y~ASEg~~gi~~~p~~~~~~~~~~L~p~~~ffEFiP~~~~~~---------~~~~~v~l~ev  388 (581)
T 4epl_A          318 YVPKLRHYAGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPVSETGE---------GEEKPVGLTQV  388 (581)
T ss_dssp             GHHHHHHHHTTSCEEECCEEETTEEEEECCCTTSCTTTCCEEECTTSCEEEEEEC----------------CCCEEGGGC
T ss_pred             HHHHHHHHcCCCccccCceeccceeeeeecCCCCCccccceeecCCcEEEEEEecccccC---------CCCceeeHHHc
Confidence            999999999999999999999999999999999998888999999999999999987654         46899999999


Q ss_pred             CCCCeEEEEEeecccccceecCCeEeee----------------------------------------------------
Q 010023          407 KLGQEYEIVLTSFTGLYRYRLGDVVEVA----------------------------------------------------  434 (520)
Q Consensus       407 e~G~~YelViTt~~GLyRYriGDvVrv~----------------------------------------------------  434 (520)
                      |+|++|||||||.+||||||+||||+|+                                                    
T Consensus       389 e~G~~YelviTt~~GL~RYr~GD~v~v~g~~~~~p~~~~~gR~~~~l~~~Ge~~~~~~v~~al~~a~~~l~~~~~~l~ef  468 (581)
T 4epl_A          389 KIGEEYEVVITNYAGLYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKIEVIDF  468 (581)
T ss_dssp             CTTCEEEEEEESTTSCSSEEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBCHHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred             CCCCeEEEEEeeccceeeEEcCCEEEEecccCCCcEEEEEeecCCeEEeeeeECCHHHHHHHHHHHHHhhcccCCeEEEE
Confidence            9999999999999999999999999999                                                    


Q ss_pred             --------------------------hHHHHHhhhhccCCChhhHhhhhcCCCCCcEEEEeccchHHHHHHHHHhCCCCC
Q 010023          435 --------------------------VLNQCCHEMDVSFVDPGYVVSRRTNSIGPLELCIVKRGAFRMILDYFVGNGAAL  488 (520)
Q Consensus       435 --------------------------~l~~~c~~ld~~l~n~~Y~~~R~~g~l~pl~v~iv~~g~F~~~~~~~~~~G~~~  488 (520)
                                                .+++||.+||++|.|++|+.+|..|+|+||+|++|++|+|++|+++++++|+++
T Consensus       469 t~~~d~~~~p~hyv~~wE~~~~~~~~~l~~~~~~Ld~~L~n~~Y~~~R~~~~L~pl~v~~v~~G~F~~l~~~~~~~G~~~  548 (581)
T 4epl_A          469 SSYIDVSTDPGHYAIFWEISGETNEDVLQDCCNCLDRAFIDAGYVSSRKCKTIGALELRVVAKGTFRKIQEHFLGLGSSA  548 (581)
T ss_dssp             EEEEECSSSSCEEEEEEEESSCCCHHHHHHHHHHHHHHCCCHHHHHHHHHTSSCCCEEEEECTTHHHHHHHHHHTTC---
T ss_pred             EEecCCCCCCCcEEEEEeecCCCCHHHHHHHHHHHHHHhCChhHHHHHhcCCCCCcEEEEeCcchHHHHHHHHHhCCCCC
Confidence                                      366778888888779999999999999999999999999999999999999999


Q ss_pred             CCCCCCccc--CCHHHHHHHhhccccccccccC
Q 010023          489 SQFKTPRCT--SNQVLVRILNDWTIKRFHSTAY  519 (520)
Q Consensus       489 ~Q~K~Pr~~--~~~~~~~~l~~~~~~~~~~~~~  519 (520)
                      +|+|+|||+  ++++++++|+++|+++|+|+++
T Consensus       549 ~Q~K~PR~~~~~~~~~~~~L~~~v~~~~~s~~~  581 (581)
T 4epl_A          549 GQFKMPRCVKPSNAKVLQILCENVVSSYFSTAF  581 (581)
T ss_dssp             ---CCCSSCCTTCHHHHHHHHTTEEEEEECCCC
T ss_pred             CCcCCCeeecCCCHHHHHHHHhcccccccCCCC
Confidence            999999999  9999999999999999999975
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query520
d1pg4a_643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 97.36
d1amua_514 Phenylalanine activating domain of gramicidin synt 96.56
d1lcia_541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 96.35
d1ry2a_640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 95.54
d1mdba_536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 94.63
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 93.55
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

Probab=97.36  E-value=0.00023  Score=76.05  Aligned_cols=24  Identities=29%  Similarity=0.235  Sum_probs=19.8

Q ss_pred             cceeeccccCCCCccceeecChhhH
Q 010023          106 ITKLSLSSGTTEGRQKYVPFTKHSS  130 (520)
Q Consensus       106 i~~f~~TSGTT~G~~K~IP~T~~~l  130 (520)
                      +.+...||||| |+||-|..|...+
T Consensus       254 ~a~IlyTSGTT-G~PKgV~~sh~~~  277 (643)
T d1pg4a_         254 PLFILYTSGST-GKPKGVLHTTGGY  277 (643)
T ss_dssp             EEEEEEECCSS-SSCEEEEEESHHH
T ss_pred             eEEEEeCCCcc-cCCCEEEEccHHH
Confidence            34677799999 9999999998753
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure