Citrus Sinensis ID: 010058

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------52
MATSMALGRLSSSVTNPIKRHLNHGSHYYVYMSSLPDQALNNEKAPAPWINQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFEKETMKYKN
ccccccccccccccccccccccccccccEEccccccccccccccccccHHHHcccccccccHHHHHHHHHHHHHcccccEEEcccccccHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccccEEEccccccccccccccccccccccEEEEccEEEEcccccccccccHHHHHHHHHHHcccEEEEcccccccHHcHHHHHHHHHHcccEEEEHHHHHHHHHHccccccccccccEEccccccccccccccEEEEEccccHHHcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccEEEEEEcccccccHHHHHHHHHHccccccccccccccccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccccc
cHHHHHHHHHHHHcccccHHHHccccHHHHHHHccccHHHHHccccccHHHHHHccHHHHcHHHHHHHHHHHHHHHHcEEcccccccccHHHHHHHccHHHHccccEEccEEcccccHHHHHHHHHHHHHHHHHHcccEEHcccEcccccHHHHHHHHHHHHcccccEEEEEcccccccHHHccHHHcccccHHHHHcEEEEEcEccccccEcHHHHHHHHHHHcccEEEEccccccccccHHHHHHHHHHHccEEEEEccccHHHHHccccccccccccEEEEEccccccccccEEEEEccccHHHHHHccEEcHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccEEHHHcccccEEEEEcHHHcccHHHHHHHHHHccEEcEEccccccccccccccEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccHHHccccc
matsmalgrlsssvtnpikrhlnhgshYYVYmsslpdqalnnekapapwinqlnapleeidpEIADIIELEKARQwkglelipsenftSVSVMQAVGSVmtnkysegypgaryyggneyIDMAESLCQKRALDafqldpakwgvnvqslsgspanFQVYTALLKPHerimaldlphgghlshgyqtdtkkISAVSIFFEtmpyrldestgyidyEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVaagvipspfeyadvvtttthkslrgprgamIFFRKGVKEINKQGQEVMYAYEDKInqavfpglqggphnhTISGLAVALkqvktpeykaYQEQVLSNSSKFARSLLERGydlvsggtENHLVLVNLRnkgidgsrVEKVLESVHIAAnkntvpgdvsamvpggirmgtpaltsrgfveeDFEKVAEFFDAAVKLALKIkgdtkgtkLKDFVATLMSDESIQSEISNLRDKVEEYAKrfptvgfeketmkykn
matsmalgrlsssvtnpikrhLNHGSHYYVYMSSLPDQALNNEKAPAPWINQLNAPLEEIDPEIADIIELEKARQWKGLelipsenftsVSVMQAVGSVMtnkysegyPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTtthkslrgprgaMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHiaankntvpgdvsamVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLAlkikgdtkgtkLKDFVatlmsdesiqSEISNLRDKVEEYakrfptvgfeketmkykn
MATSMALGRLSSSVTNPIKRHLNHGSHYYVYMSSLPDQALNNEKAPAPWINQLNApleeidpeiadiieleKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFEKETMKYKN
********************HLNHGSHYYVYMSSLPD*******APAPWINQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLM*************************************
****************************************************LNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFEK*******
MATSMALGRLSSSVTNPIKRHLNHGSHYYVYMSSLPDQALNNEKAPAPWINQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFE********
***************NPIKRHLNHGSHYYVYMSSL***********APWINQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFEKETM*Y**
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATSMALGRLSSSVTNPIKRHLNHGSHYYVYMSSLPDQALNNEKAPAPWINQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSxxxxxxxxxxxxxxxxxxxxxFPTVGFEKETMKYKN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query519 2.2.26 [Sep-21-2011]
P50433518 Serine hydroxymethyltrans N/A no 0.996 0.998 0.846 0.0
Q9SZJ5517 Serine hydroxymethyltrans no no 0.994 0.998 0.834 0.0
P34899518 Serine hydroxymethyltrans N/A no 0.992 0.994 0.847 0.0
P49357517 Serine hydroxymethyltrans N/A no 0.994 0.998 0.844 0.0
P49358517 Serine hydroxymethyltrans N/A no 0.963 0.967 0.843 0.0
P34897504 Serine hydroxymethyltrans yes no 0.886 0.912 0.612 1e-173
Q3SZ20504 Serine hydroxymethyltrans yes no 0.872 0.898 0.616 1e-173
P14519504 Serine hydroxymethyltrans yes no 0.882 0.908 0.609 1e-171
Q60V73511 Serine hydroxymethyltrans N/A no 0.882 0.896 0.612 1e-171
Q10104488 Serine hydroxymethyltrans yes no 0.870 0.926 0.629 1e-170
>sp|P50433|GLYM_SOLTU Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1 Back     alignment and function desciption
 Score =  917 bits (2371), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/520 (84%), Positives = 483/520 (92%), Gaps = 3/520 (0%)

Query: 1   MATSMALGRLSSSVTNPIKRHLNHGSHYYVYMSSLPDQAL-NNEKAPAPWINQLNAPLEE 59
           MA ++AL RLS++V  P+K   N GS YY  MSSLP++A+ + EK+   W  QLNAPLE 
Sbjct: 1   MAMAIALRRLSATVDKPVKSLYNGGSLYY--MSSLPNEAVYDKEKSGVAWPKQLNAPLEV 58

Query: 60  IDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 119
           +DPEIADIIE EKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY
Sbjct: 59  VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 118

Query: 120 IDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGH 179
           IDMAE+LCQKRAL+AF+LDPAKWGVNVQ LSGSPANFQVYTALLKPHERIMALDLPHGGH
Sbjct: 119 IDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIMALDLPHGGH 178

Query: 180 LSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARL 239
           LSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDY+QLEKSA LFRPKLIVAGASAYARL
Sbjct: 179 LSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 238

Query: 240 YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 299
           YDY RIRKVC+KQKA++LADMAHISGLVAAGVIPSPF+YADVVTTTTHKSLRGPRGAMIF
Sbjct: 239 YDYDRIRKVCNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIF 298

Query: 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQE 359
           +RKGVKE+NKQG+EV Y YEDKINQAVFPGLQGGPHNHTI+GLAVALKQ  TPEY+AYQE
Sbjct: 299 YRKGVKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQE 358

Query: 360 QVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTV 419
           QVLSNSSKFA++L E+GY+LVSGGT+NHLVLVN++NKGIDGSRVEKVLE+VHIAANKNTV
Sbjct: 359 QVLSNSSKFAQALGEKGYELVSGGTDNHLVLVNMKNKGIDGSRVEKVLEAVHIAANKNTV 418

Query: 420 PGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVA 479
           PGDVSAMVPGGIRMGTPALTSRGF+EEDF KVA+FFDAAVK+A+K+K +T+GTKLKDFVA
Sbjct: 419 PGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGTKLKDFVA 478

Query: 480 TLMSDESIQSEISNLRDKVEEYAKRFPTVGFEKETMKYKN 519
           TL S   I+SEI+ LR  VEEYAK+FPT+GFEKETMKYKN
Sbjct: 479 TLESSAPIKSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 518
Interconversion of serine and glycine.
Solanum tuberosum (taxid: 4113)
EC: 2EC: .EC: 1EC: .EC: 2EC: .EC: 1
>sp|Q9SZJ5|GLYM_ARATH Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1 Back     alignment and function description
>sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1 Back     alignment and function description
>sp|P49357|GLYM_FLAPR Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1 Back     alignment and function description
>sp|P49358|GLYN_FLAPR Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1 Back     alignment and function description
>sp|P34897|GLYM_HUMAN Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3 Back     alignment and function description
>sp|Q3SZ20|GLYM_BOVIN Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1 Back     alignment and function description
>sp|P14519|GLYM_RABIT Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2 Back     alignment and function description
>sp|Q60V73|GLYC_CAEBR Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3 Back     alignment and function description
>sp|Q10104|GLYM_SCHPO Serine hydroxymethyltransferase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=shm2 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query519
134142069516 mitochondrial serine hydroxymethyltransf 0.990 0.996 0.889 0.0
255572828513 serine hydroxymethyltransferase, putativ 0.984 0.996 0.889 0.0
224067104516 precursor of transferase serine hydroxym 0.990 0.996 0.889 0.0
225459014516 PREDICTED: serine hydroxymethyltransfera 0.990 0.996 0.874 0.0
302142103514 unnamed protein product [Vitis vinifera] 0.988 0.998 0.875 0.0
359495798518 PREDICTED: serine hydroxymethyltransfera 0.996 0.998 0.851 0.0
449451373519 PREDICTED: serine hydroxymethyltransfera 0.994 0.994 0.853 0.0
449496391519 PREDICTED: LOW QUALITY PROTEIN: serine h 0.994 0.994 0.851 0.0
255572585515 serine hydroxymethyltransferase, putativ 0.990 0.998 0.85 0.0
1707998518 RecName: Full=Serine hydroxymethyltransf 0.996 0.998 0.846 0.0
>gi|134142069|gb|ABO61378.1| mitochondrial serine hydroxymethyltransferase [Populus tremuloides] Back     alignment and taxonomy information
 Score =  941 bits (2432), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/517 (88%), Positives = 485/517 (93%), Gaps = 3/517 (0%)

Query: 4   SMALGRLSSSVTNPIKRHLNHGSHYYVYMSSLPDQALNNEK-APAPWINQLNAPLEEIDP 62
           ++AL RLSSS+ NPIK +LN GS YY  MSSLP +AL++E  A A WI QLNAPLEEIDP
Sbjct: 2   AIALRRLSSSLRNPIKPYLNGGSLYY-NMSSLPHKALSDEDTARANWIKQLNAPLEEIDP 60

Query: 63  EIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 122
           EIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
Sbjct: 61  EIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 120

Query: 123 AESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSH 182
           AE+LCQKRAL+AF LDP KWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSH
Sbjct: 121 AETLCQKRALEAFGLDPQKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSH 180

Query: 183 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDY 242
           GYQTDTKKISAVSIFFETMPYRL+ESTGY+DY+QLEKSA LFRPKLIVAGASAYARLYDY
Sbjct: 181 GYQTDTKKISAVSIFFETMPYRLNESTGYVDYDQLEKSATLFRPKLIVAGASAYARLYDY 240

Query: 243 ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 302
           ARIRKVCDKQKAV+LADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK
Sbjct: 241 ARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 300

Query: 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVL 362
           GVKEINKQG+EVMY YEDKINQAVFPGLQGGPHNHTISGLAVALKQ +TPEYKAYQEQVL
Sbjct: 301 GVKEINKQGKEVMYDYEDKINQAVFPGLQGGPHNHTISGLAVALKQARTPEYKAYQEQVL 360

Query: 363 SNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD 422
           SN SKFA+SL+E+GY+LVSGGTENHLVLVNLRNKGIDGSRVEKVLE VHIAANKNTVPGD
Sbjct: 361 SNCSKFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLELVHIAANKNTVPGD 420

Query: 423 VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLM 482
           VSAMVPGGIRMGTPALTSRGF+E DF KVAEFFDAAVKLALKIK D +GTKLKDFVA + 
Sbjct: 421 VSAMVPGGIRMGTPALTSRGFIERDFVKVAEFFDAAVKLALKIKADAQGTKLKDFVAAMK 480

Query: 483 SDESIQSEISNLRDKVEEYAKRFPTVGFEKETMKYKN 519
           SD   QSEI+ LR  VEEYAK+FPTVGFEKETMKYK+
Sbjct: 481 SD-GYQSEIARLRHDVEEYAKQFPTVGFEKETMKYKD 516

Source: Populus tremuloides

Species: Populus tremuloides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255572828|ref|XP_002527346.1| serine hydroxymethyltransferase, putative [Ricinus communis] gi|223533265|gb|EEF35018.1| serine hydroxymethyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224067104|ref|XP_002302357.1| precursor of transferase serine hydroxymethyltransferase 3 [Populus trichocarpa] gi|222844083|gb|EEE81630.1| precursor of transferase serine hydroxymethyltransferase 3 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225459014|ref|XP_002285605.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis vinifera] Back     alignment and taxonomy information
>gi|302142103|emb|CBI19306.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359495798|ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Vitis vinifera] gi|297736687|emb|CBI25704.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449451373|ref|XP_004143436.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449496391|ref|XP_004160122.1| PREDICTED: LOW QUALITY PROTEIN: serine hydroxymethyltransferase, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255572585|ref|XP_002527226.1| serine hydroxymethyltransferase, putative [Ricinus communis] gi|223533402|gb|EEF35152.1| serine hydroxymethyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|1707998|sp|P50433.1|GLYM_SOLTU RecName: Full=Serine hydroxymethyltransferase, mitochondrial; Short=SHMT; AltName: Full=Glycine hydroxymethyltransferase; AltName: Full=Serine methylase; Flags: Precursor gi|438247|emb|CAA81082.1| glycine hydroxymethyltransferase [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query519
TAIR|locus:2005518517 SHM1 "serine transhydroxymethy 0.994 0.998 0.807 4.1e-223
TAIR|locus:2148463533 SHM2 "serine hydroxymethyltran 0.990 0.964 0.796 3.7e-222
UNIPROTKB|F1SL74504 LOC100626911 "Serine hydroxyme 0.845 0.871 0.640 1.8e-151
UNIPROTKB|Q3SZ20504 SHMT2 "Serine hydroxymethyltra 0.843 0.869 0.625 1.2e-150
UNIPROTKB|P34897504 SHMT2 "Serine hydroxymethyltra 0.845 0.871 0.628 2.6e-150
RGD|1308582504 Shmt2 "serine hydroxymethyltra 0.845 0.871 0.624 3.8e-149
UNIPROTKB|P14519504 SHMT2 "Serine hydroxymethyltra 0.842 0.867 0.625 3.4e-148
UNIPROTKB|Q60V73511 mel-32 "Serine hydroxymethyltr 0.842 0.855 0.621 3.4e-148
POMBASE|SPAC18G6.04c488 shm2 "serine hydroxymethyltran 0.834 0.887 0.636 3.9e-147
CGD|CAL0003822493 SHM1 [Candida albicans (taxid: 0.840 0.884 0.615 5e-147
TAIR|locus:2005518 SHM1 "serine transhydroxymethyltransferase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2154 (763.3 bits), Expect = 4.1e-223, P = 4.1e-223
 Identities = 420/520 (80%), Positives = 462/520 (88%)

Query:     1 MATSMALGRLSSSVTNPIKRHLNHGSHYYVYMSSLPDQALNN-EKAPAPWINQLNAXXXX 59
             MA +MAL RLSSS+  PI+  +   S    YMSSLP +A++  E++   W  QLNA    
Sbjct:     1 MAMAMALRRLSSSIDKPIRPLIRSTS---CYMSSLPSEAVDEKERSRVTWPKQLNAPLEE 57

Query:    60 XXXXXXXXXXXXKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 119
                         KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY
Sbjct:    58 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 117

Query:   120 IDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGH 179
             IDMAE+LCQKRAL+AF+LDP KWGVNVQ LSGSPANF VYTALLKPHERIMALDLPHGGH
Sbjct:   118 IDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGH 177

Query:   180 LSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARL 239
             LSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDY+Q+EKSA LFRPKLIVAGASAYARL
Sbjct:   178 LSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAYARL 237

Query:   240 YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 299
             YDYARIRKVC+KQKAVMLADMAHISGLVAA VIPSPF+YADVVTTTTHKSLRGPRGAMIF
Sbjct:   238 YDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGAMIF 297

Query:   300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQE 359
             FRKGVKEINKQG+EV+Y +EDKINQAVFPGLQGGPHNHTI+GLAVALKQ  T EYKAYQE
Sbjct:   298 FRKGVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQE 357

Query:   360 QVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTV 419
             QVLSNS+KFA++L+ERGY+LVSGGT+NHLVLVNL+ KGIDGSRVEKVLE+VHIA+NKNTV
Sbjct:   358 QVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTV 417

Query:   420 PGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVA 479
             PGDVSAMVPGGIRMGTPALTSRGFVEEDF KVAE+FD AV +ALK+K + +GTKLKDFV+
Sbjct:   418 PGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVS 477

Query:   480 TLMSDESIQSEISNLRDKVEEYAKRFPTVGFEKETMKYKN 519
              + S  +IQSEI+ LR +VEE+AK+FPT+GFEKETMKYKN
Sbjct:   478 AMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517
GO:0003824 "catalytic activity" evidence=IEA
GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IEA;ISS;TAS
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0006544 "glycine metabolic process" evidence=IEA;ISS
GO:0006563 "L-serine metabolic process" evidence=IEA;ISS
GO:0019464 "glycine decarboxylation via glycine cleavage system" evidence=IMP
GO:0030170 "pyridoxal phosphate binding" evidence=IEA
GO:0005759 "mitochondrial matrix" evidence=ISS
GO:0005634 "nucleus" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0009626 "plant-type hypersensitive response" evidence=TAS
GO:0022626 "cytosolic ribosome" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0009409 "response to cold" evidence=IEP;RCA
GO:0010319 "stromule" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009853 "photorespiration" evidence=IMP
GO:0016020 "membrane" evidence=IDA
GO:0008266 "poly(U) RNA binding" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0009534 "chloroplast thylakoid" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009814 "defense response, incompatible interaction" evidence=RCA
GO:0019684 "photosynthesis, light reaction" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
TAIR|locus:2148463 SHM2 "serine hydroxymethyltransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1SL74 LOC100626911 "Serine hydroxymethyltransferase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZ20 SHMT2 "Serine hydroxymethyltransferase, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P34897 SHMT2 "Serine hydroxymethyltransferase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1308582 Shmt2 "serine hydroxymethyltransferase 2 (mitochondrial)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P14519 SHMT2 "Serine hydroxymethyltransferase, mitochondrial" [Oryctolagus cuniculus (taxid:9986)] Back     alignment and assigned GO terms
UNIPROTKB|Q60V73 mel-32 "Serine hydroxymethyltransferase" [Caenorhabditis briggsae (taxid:6238)] Back     alignment and assigned GO terms
POMBASE|SPAC18G6.04c shm2 "serine hydroxymethyltransferase Shm2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
CGD|CAL0003822 SHM1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P34898GLYC_NEUCR2, ., 1, ., 2, ., 10.59950.87090.9416N/Ano
P34899GLYM_PEA2, ., 1, ., 2, ., 10.84740.99220.9942N/Ano
Q9SZJ5GLYM_ARATH2, ., 1, ., 2, ., 10.83460.99420.9980nono
P34897GLYM_HUMAN2, ., 1, ., 2, ., 10.61290.88630.9126yesno
Q75BQ6GLYC_ASHGO2, ., 1, ., 2, ., 10.59080.86890.9616yesno
P37291GLYC_YEAST2, ., 1, ., 2, ., 10.57540.86890.9616yesno
Q60V73GLYC_CAEBR2, ., 1, ., 2, ., 10.61220.88240.8962N/Ano
P35623GLYC_SHEEP2, ., 1, ., 2, ., 10.59860.88050.9442N/Ano
P14519GLYM_RABIT2, ., 1, ., 2, ., 10.60900.88240.9087yesno
O62585GLYC_ENCCU2, ., 1, ., 2, ., 10.47690.85740.9673yesno
P50432GLYC_CAEEL2, ., 1, ., 2, ., 10.60080.88630.9072yesno
P50433GLYM_SOLTU2, ., 1, ., 2, ., 10.84610.99610.9980N/Ano
A0LV49GLYA_ACIC12, ., 1, ., 2, ., 10.43130.80530.9789yesno
Q7S5N8GLYM_NEUCR2, ., 1, ., 2, ., 10.62330.82460.8121N/Ano
Q6FUP6GLYC_CANGA2, ., 1, ., 2, ., 10.58710.86120.9530yesno
O13425GLYM_CANAX2, ., 1, ., 2, ., 10.59910.87660.9229N/Ano
P49357GLYM_FLAPR2, ., 1, ., 2, ., 10.84420.99420.9980N/Ano
O13426GLYC_CANAL2, ., 1, ., 2, ., 10.60920.86120.9510N/Ano
Q3SZ20GLYM_BOVIN2, ., 1, ., 2, ., 10.61620.87280.8988yesno
P49358GLYN_FLAPR2, ., 1, ., 2, ., 10.84320.96330.9671N/Ano
Q54Z26GLYC1_DICDI2, ., 1, ., 2, ., 10.56890.86510.9824yesno
Q10104GLYM_SCHPO2, ., 1, ., 2, ., 10.62930.87090.9262yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.1.20.998
4th Layer2.1.2.10.994

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
SHMT3
precursor of transferase serine hydroxymethyltransferase 3 (EC-2.1.2.1); Interconversion of serine and glycine (By similarity) (516 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gdcP1
precursor of carboxylase p-protein 1, glycine decarboxylase complex (EC-1.4.4.2) (1061 aa)
•  • •• 0.947
eugene3.00002342
methionyl-trna formyltransferase (EC-2.1.2.9) (356 aa)
     •• 0.930
FTHFS1
10-formyltetrahydrofolate synthetase (EC-6.3.4.3) (636 aa)
    ••• 0.927
gdcT1
precursor of carboxylase t-protein 1, glycine decarboxylase complex (EC-2.1.2.10); The glycine [...] (409 aa)
•    •• 0.921
gdcT2
RecName- Full=Aminomethyltransferase; EC=2.1.2.10;; The glycine cleavage system catalyzes the d [...] (409 aa)
•    •• 0.921
estExt_fgenesh4_pm.C_LG_X0439
aminoimidazolecarboximide ribonucleotide transformylase/inosine monophosphate cyclohydrolase (E [...] (545 aa)
   • •• 0.917
estExt_Genewise1_v1.C_LG_XIII1664
threonine aldolase (EC-4.1.2.5) (344 aa)
    ••• 0.916
estExt_fgenesh4_pg.C_LG_XIX0195
threonine aldolase (EC-4.1.2.5) (359 aa)
     •• 0.914
estExt_fgenesh4_pg.C_LG_I1607
serine--glyoxylate transaminase (EC-2.6.1.45) (401 aa)
     •• 0.914
estExt_Genewise1_v1.C_LG_IX3694
serine--glyoxylate transaminase (EC-2.6.1.45) (401 aa)
     •• 0.914

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query519
PLN03226475 PLN03226, PLN03226, serine hydroxymethyltransferas 0.0
PTZ00094452 PTZ00094, PTZ00094, serine hydroxymethyltransferas 0.0
pfam00464380 pfam00464, SHMT, Serine hydroxymethyltransferase 0.0
cd00378402 cd00378, SHMT, Serine-glycine hydroxymethyltransfe 0.0
PLN02271586 PLN02271, PLN02271, serine hydroxymethyltransferas 0.0
PRK00011416 PRK00011, glyA, serine hydroxymethyltransferase; R 0.0
COG0112413 COG0112, GlyA, Glycine/serine hydroxymethyltransfe 0.0
PRK13034416 PRK13034, PRK13034, serine hydroxymethyltransferas 1e-169
PRK13580493 PRK13580, PRK13580, serine hydroxymethyltransferas 1e-104
cd01494170 cd01494, AAT_I, Aspartate aminotransferase (AAT) s 9e-29
pfam01212288 pfam01212, Beta_elim_lyase, Beta-eliminating lyase 0.002
COG0520405 COG0520, csdA, Selenocysteine lyase/Cysteine desul 0.004
>gnl|CDD|215639 PLN03226, PLN03226, serine hydroxymethyltransferase; Provisional Back     alignment and domain information 
 Score =  965 bits (2496), Expect = 0.0
 Identities = 334/477 (70%), Positives = 386/477 (80%), Gaps = 2/477 (0%)

Query: 43  EKAPAPWINQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTN 102
           EK+        NAPLEE+DPEIADIIE EK RQWKGLELI SENFTS +VM+A+GS +TN
Sbjct: 1   EKSMVSVPKWGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTN 60

Query: 103 KYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL 162
           KYSEG PGARYYGGNEYID  E+LCQKRAL+AF+LDP KWGVNVQ LSGSPANF VYTAL
Sbjct: 61  KYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTAL 120

Query: 163 LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAA 222
           L+PH+RIM LDLPHGGHLSHGYQTD KKISA SI+FE+MPYRLDESTG IDY++LEK A 
Sbjct: 121 LQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAM 180

Query: 223 LFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVV 282
           LFRPKLI+AGASAY R +DYAR+RK+ DK  A+++ DMAHISGLVAA    SPFEY DVV
Sbjct: 181 LFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVV 240

Query: 283 TTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGL 342
           TTTTHKSLRGPRG MIFFRKG K    QG+  +Y YEDKIN AVFPGLQGGPHNHTI+ L
Sbjct: 241 TTTTHKSLRGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAAL 300

Query: 343 AVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSR 402
           AVALKQ  TPE+KAYQ+QV +N++  A  L+ +GY LV+GGT+NHLVL +LR  G+ GSR
Sbjct: 301 AVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTGSR 360

Query: 403 VEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462
           VEKVL+  HI  NKN VPGD SA+VPGG+R+GTPA+TSRG VE+DFEKVAEF   AV +A
Sbjct: 361 VEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTIA 420

Query: 463 LKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFEKETMKYKN 519
           LKI+ +  G KLKDF   L S++    +I  LR +VEE+A  FP  GF+KE+MKYK 
Sbjct: 421 LKIQKEH-GKKLKDFKKGLESNDF-SKDIEALRAEVEEFATSFPMPGFDKESMKYKE 475

Length = 475
>gnl|CDD|240264 PTZ00094, PTZ00094, serine hydroxymethyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|189558 pfam00464, SHMT, Serine hydroxymethyltransferase Back     alignment and domain information
>gnl|CDD|99733 cd00378, SHMT, Serine-glycine hydroxymethyltransferase (SHMT) Back     alignment and domain information
>gnl|CDD|215153 PLN02271, PLN02271, serine hydroxymethyltransferase Back     alignment and domain information
>gnl|CDD|234571 PRK00011, glyA, serine hydroxymethyltransferase; Reviewed Back     alignment and domain information
>gnl|CDD|223190 COG0112, GlyA, Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|237280 PRK13034, PRK13034, serine hydroxymethyltransferase; Reviewed Back     alignment and domain information
>gnl|CDD|184161 PRK13580, PRK13580, serine hydroxymethyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes Back     alignment and domain information
>gnl|CDD|216367 pfam01212, Beta_elim_lyase, Beta-eliminating lyase Back     alignment and domain information
>gnl|CDD|223594 COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 519
KOG2467477 consensus Glycine/serine hydroxymethyltransferase 100.0
COG0112413 GlyA Glycine/serine hydroxymethyltransferase [Amin 100.0
PLN02271586 serine hydroxymethyltransferase 100.0
PF00464399 SHMT: Serine hydroxymethyltransferase; InterPro: I 100.0
PLN03226475 serine hydroxymethyltransferase; Provisional 100.0
PRK13580493 serine hydroxymethyltransferase; Provisional 100.0
PTZ00094452 serine hydroxymethyltransferase; Provisional 100.0
PRK13034416 serine hydroxymethyltransferase; Reviewed 100.0
PRK00011416 glyA serine hydroxymethyltransferase; Reviewed 100.0
cd00378402 SHMT Serine-glycine hydroxymethyltransferase (SHMT 100.0
COG0520405 csdA Selenocysteine lyase/Cysteine desulfurase [Po 100.0
COG1104386 NifS Cysteine sulfinate desulfinase/cysteine desul 100.0
COG0436393 Aspartate/tyrosine/aromatic aminotransferase [Amin 100.0
PRK10874401 cysteine sulfinate desulfinase; Provisional 99.98
TIGR03392398 FeS_syn_CsdA cysteine desulfurase, catalytic subun 99.98
PRK09295406 bifunctional cysteine desulfurase/selenocysteine l 99.98
cd06451356 AGAT_like Alanine-glyoxylate aminotransferase (AGA 99.97
PLN02855424 Bifunctional selenocysteine lyase/cysteine desulfu 99.97
TIGR03402379 FeS_nifS cysteine desulfurase NifS. Members of thi 99.97
PF00266371 Aminotran_5: Aminotransferase class-V; InterPro: I 99.97
TIGR01977376 am_tr_V_EF2568 cysteine desulfurase family protein 99.97
TIGR01979403 sufS cysteine desulfurases, SufS subfamily. This m 99.97
cd06453373 SufS_like Cysteine desulfurase (SufS)-like. This f 99.97
TIGR01976397 am_tr_V_VC1184 cysteine desulfurase family protein 99.97
PLN02409401 serine--glyoxylate aminotransaminase 99.97
TIGR03403382 nifS_epsilon cysteine desulfurase, NifS family, ep 99.97
PRK02948381 cysteine desulfurase; Provisional 99.97
PLN02651364 cysteine desulfurase 99.97
COG1168388 MalY Bifunctional PLP-dependent enzyme with beta-c 99.96
COG0075383 Serine-pyruvate aminotransferase/archaeal aspartat 99.96
PRK13238460 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d 99.96
TIGR02006402 IscS cysteine desulfurase IscS. This model represe 99.96
TIGR02326363 transamin_PhnW 2-aminoethylphosphonate--pyruvate t 99.96
TIGR01814406 kynureninase kynureninase. This model describes ky 99.96
PRK06108382 aspartate aminotransferase; Provisional 99.96
TIGR01822393 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig 99.96
PLN00175413 aminotransferase family protein; Provisional 99.95
PRK13479368 2-aminoethylphosphonate--pyruvate transaminase; Pr 99.95
PRK14012404 cysteine desulfurase; Provisional 99.95
COG0399374 WecE Predicted pyridoxal phosphate-dependent enzym 99.95
KOG1549428 consensus Cysteine desulfurase NFS1 [Amino acid tr 99.95
TIGR03301355 PhnW-AepZ 2-aminoethylphosphonate aminotransferase 99.95
TIGR03235353 DNA_S_dndA cysteine desulfurase DndA. This model d 99.95
PRK08361391 aspartate aminotransferase; Provisional 99.95
PRK08960387 hypothetical protein; Provisional 99.95
PRK09331387 Sep-tRNA:Cys-tRNA synthetase; Provisional 99.95
PRK07682378 hypothetical protein; Validated 99.95
PRK13520371 L-tyrosine decarboxylase; Provisional 99.95
PRK05957389 aspartate aminotransferase; Provisional 99.95
PRK07681399 aspartate aminotransferase; Provisional 99.95
TIGR03540383 DapC_direct LL-diaminopimelate aminotransferase. T 99.94
PRK06225380 aspartate aminotransferase; Provisional 99.94
cd06454349 KBL_like KBL_like; this family belongs to the pyri 99.94
PRK07366388 succinyldiaminopimelate transaminase; Validated 99.94
cd00617431 Tnase_like Tryptophanase family (Tnase). This fami 99.94
KOG0257420 consensus Kynurenine aminotransferase, glutamine t 99.94
PRK07337388 aminotransferase; Validated 99.94
PRK07179407 hypothetical protein; Provisional 99.94
PRK12414384 putative aminotransferase; Provisional 99.94
PRK09082386 methionine aminotransferase; Validated 99.94
PRK06348384 aspartate aminotransferase; Provisional 99.94
PRK08912387 hypothetical protein; Provisional 99.94
PLN02724 805 Molybdenum cofactor sulfurase 99.94
PRK06939397 2-amino-3-ketobutyrate coenzyme A ligase; Provisio 99.94
TIGR02539370 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation 99.94
PRK06207405 aspartate aminotransferase; Provisional 99.94
PLN02483489 serine palmitoyltransferase 99.94
TIGR00858360 bioF 8-amino-7-oxononanoate synthase. This model r 99.94
cd00613398 GDC-P Glycine cleavage system P-protein, alpha- an 99.94
PRK09276385 LL-diaminopimelate aminotransferase; Provisional 99.94
PRK06290410 aspartate aminotransferase; Provisional 99.94
PRK07683387 aminotransferase A; Validated 99.94
PRK13355517 bifunctional HTH-domain containing protein/aminotr 99.94
PRK05942394 aspartate aminotransferase; Provisional 99.94
PRK07777387 aminotransferase; Validated 99.94
PRK07309391 aromatic amino acid aminotransferase; Validated 99.94
cd06452361 SepCysS Sep-tRNA:Cys-tRNA synthase. This family be 99.94
PRK08068389 transaminase; Reviewed 99.94
PRK07550386 hypothetical protein; Provisional 99.94
TIGR03812373 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe 99.93
PRK05958385 8-amino-7-oxononanoate synthase; Reviewed 99.93
COG0156388 BioF 7-keto-8-aminopelargonate synthetase and rela 99.93
KOG2862385 consensus Alanine-glyoxylate aminotransferase AGT1 99.93
PLN00145430 tyrosine/nicotianamine aminotransferase; Provision 99.93
TIGR03537350 DapC succinyldiaminopimelate transaminase. Note: t 99.93
TIGR01437363 selA_rel uncharacterized pyridoxal phosphate-depen 99.93
PRK08636403 aspartate aminotransferase; Provisional 99.93
PTZ00377481 alanine aminotransferase; Provisional 99.93
PRK08363398 alanine aminotransferase; Validated 99.93
PRK05764393 aspartate aminotransferase; Provisional 99.93
COG0079356 HisC Histidinol-phosphate/aromatic aminotransferas 99.93
TIGR01825385 gly_Cac_T_rel pyridoxal phosphate-dependent acyltr 99.93
cd00616352 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa 99.93
PRK11658379 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin 99.93
PLN02656409 tyrosine transaminase 99.93
PLN03026380 histidinol-phosphate aminotransferase; Provisional 99.93
PLN02187462 rooty/superroot1 99.93
PRK09147396 succinyldiaminopimelate transaminase; Provisional 99.93
PRK14807351 histidinol-phosphate aminotransferase; Provisional 99.93
PRK04870356 histidinol-phosphate aminotransferase; Provisional 99.92
PRK02769380 histidine decarboxylase; Provisional 99.92
TIGR03588380 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin 99.92
PRK05387353 histidinol-phosphate aminotransferase; Provisional 99.92
PRK04366481 glycine dehydrogenase subunit 2; Validated 99.92
PRK01533366 histidinol-phosphate aminotransferase; Validated 99.92
PRK09148405 aminotransferase; Validated 99.92
cd06502338 TA_like Low-specificity threonine aldolase (TA). T 99.92
PRK06107402 aspartate aminotransferase; Provisional 99.92
PTZ00433412 tyrosine aminotransferase; Provisional 99.92
TIGR01141346 hisC histidinol-phosphate aminotransferase. Histid 99.92
TIGR03538393 DapC_gpp succinyldiaminopimelate transaminase. Thi 99.92
PLN02721353 threonine aldolase 99.92
PRK02731367 histidinol-phosphate aminotransferase; Validated 99.92
PLN02822481 serine palmitoyltransferase 99.92
PLN00143409 tyrosine/nicotianamine aminotransferase; Provision 99.92
PRK03158359 histidinol-phosphate aminotransferase; Provisional 99.92
PRK03317368 histidinol-phosphate aminotransferase; Provisional 99.92
PRK07324373 transaminase; Validated 99.92
PRK08153369 histidinol-phosphate aminotransferase; Provisional 99.92
PRK03080378 phosphoserine aminotransferase; Provisional 99.92
PRK13392410 5-aminolevulinate synthase; Provisional 99.92
PRK09265404 aminotransferase AlaT; Validated 99.92
PRK09105370 putative aminotransferase; Provisional 99.92
TIGR01265403 tyr_nico_aTase tyrosine/nicotianamine aminotransfe 99.92
PRK08175395 aminotransferase; Validated 99.92
PRK06855433 aminotransferase; Validated 99.92
PLN03227392 serine palmitoyltransferase-like protein; Provisio 99.92
TIGR01788431 Glu-decarb-GAD glutamate decarboxylase. This model 99.92
PLN02450468 1-aminocyclopropane-1-carboxylate synthase 99.91
PRK05355360 3-phosphoserine/phosphohydroxythreonine aminotrans 99.91
PLN02376496 1-aminocyclopropane-1-carboxylate synthase 99.91
PRK09064407 5-aminolevulinate synthase; Validated 99.91
PRK00950361 histidinol-phosphate aminotransferase; Validated 99.91
TIGR01821402 5aminolev_synth 5-aminolevulinic acid synthase. Th 99.91
PRK08056356 threonine-phosphate decarboxylase; Provisional 99.91
cd06450345 DOPA_deC_like DOPA decarboxylase family. This fami 99.91
PRK07590409 L,L-diaminopimelate aminotransferase; Validated 99.91
TIGR03576346 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 99.91
cd00611355 PSAT_like Phosphoserine aminotransferase (PSAT) fa 99.91
PRK00451447 glycine dehydrogenase subunit 1; Validated 99.91
TIGR01264401 tyr_amTase_E tyrosine aminotransferase, eukaryotic 99.91
PLN02231534 alanine transaminase 99.91
PRK10534333 L-threonine aldolase; Provisional 99.91
PRK15481431 transcriptional regulatory protein PtsJ; Provision 99.91
PRK05166371 histidinol-phosphate aminotransferase; Provisional 99.91
PF01041363 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe 99.9
PRK07568397 aspartate aminotransferase; Provisional 99.9
PRK01688351 histidinol-phosphate aminotransferase; Provisional 99.9
PRK07865364 N-succinyldiaminopimelate aminotransferase; Review 99.9
PRK13393406 5-aminolevulinate synthase; Provisional 99.9
PRK03321352 putative aminotransferase; Provisional 99.9
PLN03032374 serine decarboxylase; Provisional 99.9
PRK05937370 8-amino-7-oxononanoate synthase; Provisional 99.9
PLN02955476 8-amino-7-oxononanoate synthase 99.9
TIGR03539357 DapC_actino succinyldiaminopimelate transaminase. 99.9
PRK07908349 hypothetical protein; Provisional 99.9
PF00155363 Aminotran_1_2: Aminotransferase class I and II 1-a 99.9
PRK14809357 histidinol-phosphate aminotransferase; Provisional 99.9
PRK02610374 histidinol-phosphate aminotransferase; Provisional 99.9
PRK09275527 aspartate aminotransferase; Provisional 99.9
TIGR01364349 serC_1 phosphoserine aminotransferase. This model 99.89
PRK06836394 aspartate aminotransferase; Provisional 99.89
COG1167459 ARO8 Transcriptional regulators containing a DNA-b 99.89
TIGR02379376 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase 99.89
TIGR01366361 serC_3 phosphoserine aminotransferase, putative. T 99.89
cd00609350 AAT_like Aspartate aminotransferase family. This f 99.89
PLN02414993 glycine dehydrogenase (decarboxylating) 99.89
PRK04781364 histidinol-phosphate aminotransferase; Provisional 99.89
PRK06358354 threonine-phosphate decarboxylase; Provisional 99.89
PLN02607447 1-aminocyclopropane-1-carboxylate synthase 99.89
PLN026721082 methionine S-methyltransferase 99.89
TIGR03542402 DAPAT_plant LL-diaminopimelate aminotransferase. T 99.88
PRK04635354 histidinol-phosphate aminotransferase; Provisional 99.88
PRK13237460 tyrosine phenol-lyase; Provisional 99.88
PRK05839374 hypothetical protein; Provisional 99.88
PRK07392360 threonine-phosphate decarboxylase; Validated 99.88
TIGR03801521 asp_4_decarbox aspartate 4-decarboxylase. This enz 99.88
PRK15407438 lipopolysaccharide biosynthesis protein RfbH; Prov 99.88
KOG0259447 consensus Tyrosine aminotransferase [Amino acid tr 99.87
PRK09440416 avtA valine--pyruvate transaminase; Provisional 99.87
cd00615294 Orn_deC_like Ornithine decarboxylase family. This 99.87
TIGR02618450 tyr_phenol_ly tyrosine phenol-lyase. This model de 99.87
PF01276417 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; 99.86
PRK09257396 aromatic amino acid aminotransferase; Provisional 99.86
PTZ00376404 aspartate aminotransferase; Provisional 99.86
COG2008342 GLY1 Threonine aldolase [Amino acid transport and 99.86
PRK11706375 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio 99.86
PRK06425332 histidinol-phosphate aminotransferase; Validated 99.86
PLN02368407 alanine transaminase 99.86
PRK14808335 histidinol-phosphate aminotransferase; Provisional 99.85
PRK03967337 histidinol-phosphate aminotransferase; Provisional 99.85
KOG1360570 consensus 5-aminolevulinate synthase [Coenzyme tra 99.85
PRK05968389 hypothetical protein; Provisional 99.85
PLN02397423 aspartate transaminase 99.85
TIGR01140330 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy 99.84
PRK04311464 selenocysteine synthase; Provisional 99.84
KOG1359417 consensus Glycine C-acetyltransferase/2-amino-3-ke 99.84
PRK06767386 methionine gamma-lyase; Provisional 99.84
PRK15029755 arginine decarboxylase; Provisional 99.84
PLN02880490 tyrosine decarboxylase 99.83
TIGR01328391 met_gam_lyase methionine gamma-lyase. This model d 99.83
PRK05367954 glycine dehydrogenase; Provisional 99.83
PRK07504398 O-succinylhomoserine sulfhydrylase; Reviewed 99.83
PRK06234400 methionine gamma-lyase; Provisional 99.83
PLN02452365 phosphoserine transaminase 99.83
PRK05664330 threonine-phosphate decarboxylase; Reviewed 99.83
PLN02242418 methionine gamma-lyase 99.82
TIGR00461939 gcvP glycine dehydrogenase (decarboxylating). This 99.82
TIGR01329378 cysta_beta_ly_E cystathionine beta-lyase, eukaryot 99.82
PRK06959339 putative threonine-phosphate decarboxylase; Provis 99.82
PRK07811388 cystathionine gamma-synthase; Provisional 99.82
PRK00854401 rocD ornithine--oxo-acid transaminase; Reviewed 99.82
TIGR03531444 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr 99.82
COG3844407 Kynureninase [Amino acid transport and metabolism] 99.82
PRK12566954 glycine dehydrogenase; Provisional 99.82
TIGR00474454 selA seryl-tRNA(sec) selenium transferase. In bact 99.82
PRK07505402 hypothetical protein; Provisional 99.82
PRK08133390 O-succinylhomoserine sulfhydrylase; Validated 99.81
PRK07503403 methionine gamma-lyase; Provisional 99.81
PRK08574385 cystathionine gamma-synthase; Provisional 99.81
PRK08064390 cystathionine beta-lyase; Provisional 99.81
cd00614369 CGS_like CGS_like: Cystathionine gamma-synthase is 99.81
PRK08354311 putative aminotransferase; Provisional 99.81
PRK08861388 cystathionine gamma-synthase; Provisional 99.8
PRK08637388 hypothetical protein; Provisional 99.8
PLN02590539 probable tyrosine decarboxylase 99.8
TIGR01324377 cysta_beta_ly_B cystathionine beta-lyase, bacteria 99.8
TIGR03799522 NOD_PanD_pyr putative pyridoxal-dependent aspartat 99.8
PRK08776405 cystathionine gamma-synthase; Provisional 99.8
KOG1368384 consensus Threonine aldolase [Amino acid transport 99.8
PRK07810403 O-succinylhomoserine sulfhydrylase; Provisional 99.8
TIGR01325380 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. 99.8
PRK13578720 ornithine decarboxylase; Provisional 99.8
PRK08247366 cystathionine gamma-synthase; Reviewed 99.79
PRK08249398 cystathionine gamma-synthase; Provisional 99.79
PLN02263470 serine decarboxylase 99.79
PRK04073396 rocD ornithine--oxo-acid transaminase; Provisional 99.79
cd00610413 OAT_like Acetyl ornithine aminotransferase family. 99.79
PRK08045386 cystathionine gamma-synthase; Provisional 99.79
TIGR01365374 serC_2 phosphoserine aminotransferase, Methanosarc 99.79
PRK07050394 cystathionine beta-lyase; Provisional 99.79
PRK05613437 O-acetylhomoserine aminocarboxypropyltransferase; 99.78
PRK15400714 lysine decarboxylase CadA; Provisional 99.78
PRK06460376 hypothetical protein; Provisional 99.78
PRK03244398 argD acetylornithine aminotransferase; Provisional 99.78
TIGR00707379 argD acetylornithine and succinylornithine aminotr 99.78
PLN02509464 cystathionine beta-lyase 99.78
COG1103382 Archaea-specific pyridoxal phosphate-dependent enz 99.78
PRK07269364 cystathionine gamma-synthase; Reviewed 99.78
TIGR02080382 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. 99.78
PRK15399713 lysine decarboxylase LdcC; Provisional 99.78
PRK01278389 argD acetylornithine transaminase protein; Provisi 99.77
PRK05939397 hypothetical protein; Provisional 99.77
COG0076460 GadB Glutamate decarboxylase and related PLP-depen 99.76
PRK08114395 cystathionine beta-lyase; Provisional 99.76
PLN02414 993 glycine dehydrogenase (decarboxylating) 99.75
PRK08134433 O-acetylhomoserine aminocarboxypropyltransferase; 99.75
PRK06176380 cystathionine gamma-synthase/cystathionine beta-ly 99.75
TIGR01885401 Orn_aminotrans ornithine aminotransferase. This mo 99.75
PRK09028394 cystathionine beta-lyase; Provisional 99.75
PRK07812436 O-acetylhomoserine aminocarboxypropyltransferase; 99.75
PRK06702432 O-acetylhomoserine aminocarboxypropyltransferase; 99.75
PRK07582366 cystathionine gamma-lyase; Validated 99.75
PRK08248431 O-acetylhomoserine aminocarboxypropyltransferase; 99.75
PRK05994427 O-acetylhomoserine aminocarboxypropyltransferase; 99.74
TIGR03246397 arg_catab_astC succinylornithine transaminase fami 99.74
TIGR02617467 tnaA_trp_ase tryptophanase, leader peptide-associa 99.74
PRK07671377 cystathionine beta-lyase; Provisional 99.74
COG1982557 LdcC Arginine/lysine/ornithine decarboxylases [Ami 99.74
KOG0256471 consensus 1-aminocyclopropane-1-carboxylate syntha 99.74
PTZ00125400 ornithine aminotransferase-like protein; Provision 99.73
PRK06084425 O-acetylhomoserine aminocarboxypropyltransferase; 99.73
KOG1357519 consensus Serine palmitoyltransferase [Posttransla 99.73
PRK12462364 phosphoserine aminotransferase; Provisional 99.72
COG4992404 ArgD Ornithine/acetylornithine aminotransferase [A 99.72
PRK06434384 cystathionine gamma-lyase; Validated 99.72
PRK05967395 cystathionine beta-lyase; Provisional 99.72
PRK02627396 acetylornithine aminotransferase; Provisional 99.72
PRK02936377 argD acetylornithine aminotransferase; Provisional 99.72
COG1003496 GcvP Glycine cleavage system protein P (pyridoxal- 99.72
PRK05093403 argD bifunctional N-succinyldiaminopimelate-aminot 99.72
TIGR01326418 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d 99.71
PRK07049427 methionine gamma-lyase; Validated 99.71
PRK12381406 bifunctional succinylornithine transaminase/acetyl 99.71
PRK05367 954 glycine dehydrogenase; Provisional 99.7
KOG0633375 consensus Histidinol phosphate aminotransferase [A 99.7
PF01053386 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent 99.67
cd01494170 AAT_I Aspartate aminotransferase (AAT) superfamily 99.67
PF01212290 Beta_elim_lyase: Beta-eliminating lyase; InterPro: 99.66
TIGR00713423 hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi 99.66
COG0626396 MetC Cystathionine beta-lyases/cystathionine gamma 99.66
PF00282373 Pyridoxal_deC: Pyridoxal-dependent decarboxylase c 99.65
COG3977417 Alanine-alpha-ketoisovalerate (or valine-pyruvate) 99.63
PRK04260375 acetylornithine aminotransferase; Provisional 99.63
PLN02624474 ornithine-delta-aminotransferase 99.63
PRK03715395 argD acetylornithine transaminase protein; Provisi 99.61
KOG0634472 consensus Aromatic amino acid aminotransferase and 99.61
PF06838403 Met_gamma_lyase: Methionine gamma-lyase ; InterPro 99.59
PLN02760504 4-aminobutyrate:pyruvate transaminase 99.57
PRK05964423 adenosylmethionine--8-amino-7-oxononanoate transam 99.56
COG1448396 TyrB Aspartate/tyrosine/aromatic aminotransferase 99.56
PLN00144382 acetylornithine transaminase 99.56
PRK04612408 argD acetylornithine transaminase protein; Provisi 99.56
COG2873426 MET17 O-acetylhomoserine sulfhydrylase [Amino acid 99.56
PRK08117433 4-aminobutyrate aminotransferase; Provisional 99.55
COG0160447 GabT 4-aminobutyrate aminotransferase and related 99.55
PRK12403460 putative aminotransferase; Provisional 99.54
PRK08360443 4-aminobutyrate aminotransferase; Provisional 99.54
COG1921395 SelA Selenocysteine synthase [seryl-tRNASer seleni 99.53
PRK08088425 4-aminobutyrate aminotransferase; Validated 99.53
PRK09792421 4-aminobutyrate transaminase; Provisional 99.51
PRK13360442 omega amino acid--pyruvate transaminase; Provision 99.51
PRK11522459 putrescine--2-oxoglutarate aminotransferase; Provi 99.5
PRK00062426 glutamate-1-semialdehyde aminotransferase; Provisi 99.5
TIGR03372442 putres_am_tran putrescine aminotransferase. Member 99.49
PRK06058443 4-aminobutyrate aminotransferase; Provisional 99.49
PRK09221445 beta alanine--pyruvate transaminase; Provisional 99.48
PRK07495425 4-aminobutyrate aminotransferase; Provisional 99.48
PRK07986428 adenosylmethionine--8-amino-7-oxononanoate transam 99.48
PRK06541460 hypothetical protein; Provisional 99.47
TIGR00461 939 gcvP glycine dehydrogenase (decarboxylating). This 99.47
COG0001432 HemL Glutamate-1-semialdehyde aminotransferase [Co 99.46
PRK04013364 argD acetylornithine/acetyl-lysine aminotransferas 99.46
PRK06777421 4-aminobutyrate aminotransferase; Provisional 99.45
PRK09264425 diaminobutyrate--2-oxoglutarate aminotransferase; 99.45
KOG0053409 consensus Cystathionine beta-lyases/cystathionine 99.44
PRK08593445 4-aminobutyrate aminotransferase; Provisional 99.44
TIGR03811608 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu 99.43
PRK06173429 adenosylmethionine--8-amino-7-oxononanoate transam 99.43
PRK06105460 aminotransferase; Provisional 99.43
TIGR00508427 bioA adenosylmethionine-8-amino-7-oxononanoate tra 99.43
PRK06062451 hypothetical protein; Provisional 99.43
TIGR02407412 ectoine_ectB diaminobutyrate--2-oxoglutarate amino 99.42
KOG0258475 consensus Alanine aminotransferase [Amino acid tra 99.42
TIGR00700420 GABAtrnsam 4-aminobutyrate aminotransferase, proka 99.42
KOG1383491 consensus Glutamate decarboxylase/sphingosine phos 99.42
PF12897425 Aminotran_MocR: Alanine-glyoxylate amino-transfera 99.42
PRK05769441 4-aminobutyrate aminotransferase; Provisional 99.41
PRK05630422 adenosylmethionine--8-amino-7-oxononanoate transam 99.41
PRK00615433 glutamate-1-semialdehyde aminotransferase; Provisi 99.4
COG3033471 TnaA Tryptophanase [Amino acid transport and metab 99.4
PRK05965459 hypothetical protein; Provisional 99.39
KOG1402427 consensus Ornithine aminotransferase [Amino acid t 99.39
PRK07678451 aminotransferase; Validated 99.38
PF02347429 GDC-P: Glycine cleavage system P-protein; InterPro 99.38
COG0161449 BioA Adenosylmethionine-8-amino-7-oxononanoate ami 99.37
PRK06918451 4-aminobutyrate aminotransferase; Reviewed 99.37
COG0403450 GcvP Glycine cleavage system protein P (pyridoxal- 99.37
PRK07046453 aminotransferase; Validated 99.37
PRK07480456 putative aminotransferase; Validated 99.36
PRK06916460 adenosylmethionine--8-amino-7-oxononanoate transam 99.36
PRK06943453 adenosylmethionine--8-amino-7-oxononanoate transam 99.36
PRK06082459 4-aminobutyrate aminotransferase; Provisional 99.35
PRK07482461 hypothetical protein; Provisional 99.34
PRK06149972 hypothetical protein; Provisional 99.34
PRK05639457 4-aminobutyrate aminotransferase; Provisional 99.33
COG4100416 Cystathionine beta-lyase family protein involved i 99.33
KOG20401001 consensus Glycine dehydrogenase (decarboxylating) 99.32
KOG1358467 consensus Serine palmitoyltransferase [Posttransla 99.32
TIGR00709442 dat 2,4-diaminobutyrate 4-transaminases. This fami 99.31
PRK06917447 hypothetical protein; Provisional 99.31
PF03841367 SelA: L-seryl-tRNA selenium transferase; InterPro: 99.31
PRK07481449 hypothetical protein; Provisional 99.3
PLN02482474 glutamate-1-semialdehyde 2,1-aminomutase 99.3
PRK07036466 hypothetical protein; Provisional 99.3
PRK08742472 adenosylmethionine--8-amino-7-oxononanoate transam 99.29
PRK07030466 adenosylmethionine--8-amino-7-oxononanoate transam 99.28
PRK12389428 glutamate-1-semialdehyde aminotransferase; Provisi 99.28
KOG3846465 consensus L-kynurenine hydrolase [Amino acid trans 99.27
PRK07483443 hypothetical protein; Provisional 99.27
PRK06938464 diaminobutyrate--2-oxoglutarate aminotransferase; 99.24
PRK06209431 glutamate-1-semialdehyde 2,1-aminomutase; Provisio 99.24
TIGR00699464 GABAtrns_euk 4-aminobutyrate aminotransferase, euk 99.23
PRK061481013 hypothetical protein; Provisional 99.2
COG1932365 SerC Phosphoserine aminotransferase [Coenzyme meta 99.19
PRK06931459 diaminobutyrate--2-oxoglutarate aminotransferase; 99.18
TIGR03251431 LAT_fam L-lysine 6-transaminase. Characterized mem 99.16
PF05889389 SLA_LP_auto_ag: Soluble liver antigen/liver pancre 99.11
PRK08297443 L-lysine aminotransferase; Provisional 99.08
PRK12566 954 glycine dehydrogenase; Provisional 99.07
PLN02974817 adenosylmethionine-8-amino-7-oxononanoate transami 99.06
KOG0629510 consensus Glutamate decarboxylase and related prot 99.03
KOG1404442 consensus Alanine-glyoxylate aminotransferase AGT2 98.97
KOG0628511 consensus Aromatic-L-amino-acid/L-histidine decarb 98.83
KOG1411427 consensus Aspartate aminotransferase/Glutamic oxal 98.77
KOG1401433 consensus Acetylornithine aminotransferase [Amino 98.73
PF00202339 Aminotran_3: Aminotransferase class-III; InterPro: 98.61
KOG1412410 consensus Aspartate aminotransferase/Glutamic oxal 98.5
KOG1403452 consensus Predicted alanine-glyoxylate aminotransf 98.43
PF04864363 Alliinase_C: Allinase; InterPro: IPR006948 Allicin 98.13
KOG1405484 consensus 4-aminobutyrate aminotransferase [Amino 98.08
KOG2040 1001 consensus Glycine dehydrogenase (decarboxylating) 97.92
PLN02994153 1-aminocyclopropane-1-carboxylate synthase 97.65
KOG2790370 consensus Phosphoserine aminotransferase [Coenzyme 97.63
KOG3843432 consensus Predicted serine hydroxymethyltransferas 97.14
PRK09375319 quinolinate synthetase; Provisional 80.35
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.8e-108  Score=773.71  Aligned_cols=464  Identities=72%  Similarity=1.140  Sum_probs=449.0

Q ss_pred             chhhhhhhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHH
Q 010058           48 PWINQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC  127 (519)
Q Consensus        48 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~  127 (519)
                      .+..+++.+|.+.|||++++|+.|+.||+.+|+||||||+++.+|+||++++|+|+|+|||||.|||+|++++|++|.+|
T Consensus        12 ~~~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LC   91 (477)
T KOG2467|consen   12 AVIKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLC   91 (477)
T ss_pred             hhhhhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHH
Confidence            45677889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC
Q 010058          128 QKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE  207 (519)
Q Consensus       128 ~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~  207 (519)
                      ++++.+.||+|++.||||||+.||+.||++++.++++|+|+|+.+|+++|||++|||++..+++++..+.|+..||.+|+
T Consensus        92 q~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~  171 (477)
T KOG2467|consen   92 QKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDP  171 (477)
T ss_pred             HHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCC
Q 010058          208 STGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTH  287 (519)
Q Consensus       208 ~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~  287 (519)
                      .++.||||.|++.+..++||+||++.|.|++.+|++++++||++.|+++++|+||++|+++.++.|+||++|||||+++|
T Consensus       172 ~TG~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTH  251 (477)
T KOG2467|consen  172 STGYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTH  251 (477)
T ss_pred             CCCceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCCCcceEEeeccccccc-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHH
Q 010058          288 KSLRGPRGAMIFFRKGVKEIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSS  366 (519)
Q Consensus       288 K~l~GprgG~i~~~~~~~~~~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~  366 (519)
                      |+|+|||||+|++++..+... ..|..+.|++.++||.++||++||+||+|.|+|+++||+++..++|++|++|+.+|++
T Consensus       252 KsLRGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nak  331 (477)
T KOG2467|consen  252 KSLRGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAK  331 (477)
T ss_pred             ccccCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence            999999999999999876555 6788889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHH
Q 010058          367 KFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEE  446 (519)
Q Consensus       367 ~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~  446 (519)
                      .|+++|.++|++++++|+|+|+++||+++.|+++..+++.|+..+|.+|+|++|||.++..|++||||++++|+||+.|+
T Consensus       332 ala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~  411 (477)
T KOG2467|consen  332 ALASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEE  411 (477)
T ss_pred             HHHHHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCCCC
Q 010058          447 DFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFE  511 (519)
Q Consensus       447 di~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~  511 (519)
                      |+++++++|.++++.+.+++.+..+++++||++.+.+++...+++.+||++|++|+.+||+|+|+
T Consensus       412 df~~v~~fi~~av~i~~~~~~~~~~~~lkdf~~~~~~~~~~~~~v~~Lr~~Ve~fa~~fp~pg~~  476 (477)
T KOG2467|consen  412 DFEKVADFIDRAVKIALEIQKEAGGKKLKDFKKFLSENKVMSEEVAELRKRVEEFAGQFPMPGFE  476 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhccCchhHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            99999999999999999999887568999999999885443468999999999999999999985

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02271 serine hydroxymethyltransferase Back     alignment and domain information
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) [] Back     alignment and domain information
>PLN03226 serine hydroxymethyltransferase; Provisional Back     alignment and domain information
>PRK13580 serine hydroxymethyltransferase; Provisional Back     alignment and domain information
>PTZ00094 serine hydroxymethyltransferase; Provisional Back     alignment and domain information
>PRK13034 serine hydroxymethyltransferase; Reviewed Back     alignment and domain information
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed Back     alignment and domain information
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT) Back     alignment and domain information
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism] Back     alignment and domain information
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10874 cysteine sulfinate desulfinase; Provisional Back     alignment and domain information
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA Back     alignment and domain information
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated Back     alignment and domain information
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family Back     alignment and domain information
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase Back     alignment and domain information
>TIGR03402 FeS_nifS cysteine desulfurase NifS Back     alignment and domain information
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue Back     alignment and domain information
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein Back     alignment and domain information
>TIGR01979 sufS cysteine desulfurases, SufS subfamily Back     alignment and domain information
>cd06453 SufS_like Cysteine desulfurase (SufS)-like Back     alignment and domain information
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily Back     alignment and domain information
>PLN02409 serine--glyoxylate aminotransaminase Back     alignment and domain information
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type Back     alignment and domain information
>PRK02948 cysteine desulfurase; Provisional Back     alignment and domain information
>PLN02651 cysteine desulfurase Back     alignment and domain information
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism] Back     alignment and domain information
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional Back     alignment and domain information
>TIGR02006 IscS cysteine desulfurase IscS Back     alignment and domain information
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase Back     alignment and domain information
>TIGR01814 kynureninase kynureninase Back     alignment and domain information
>PRK06108 aspartate aminotransferase; Provisional Back     alignment and domain information
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase Back     alignment and domain information
>PLN00175 aminotransferase family protein; Provisional Back     alignment and domain information
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional Back     alignment and domain information
>PRK14012 cysteine desulfurase; Provisional Back     alignment and domain information
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase Back     alignment and domain information
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA Back     alignment and domain information
>PRK08361 aspartate aminotransferase; Provisional Back     alignment and domain information
>PRK08960 hypothetical protein; Provisional Back     alignment and domain information
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional Back     alignment and domain information
>PRK07682 hypothetical protein; Validated Back     alignment and domain information
>PRK13520 L-tyrosine decarboxylase; Provisional Back     alignment and domain information
>PRK05957 aspartate aminotransferase; Provisional Back     alignment and domain information
>PRK07681 aspartate aminotransferase; Provisional Back     alignment and domain information
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase Back     alignment and domain information
>PRK06225 aspartate aminotransferase; Provisional Back     alignment and domain information
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I) Back     alignment and domain information
>PRK07366 succinyldiaminopimelate transaminase; Validated Back     alignment and domain information
>cd00617 Tnase_like Tryptophanase family (Tnase) Back     alignment and domain information
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07337 aminotransferase; Validated Back     alignment and domain information
>PRK07179 hypothetical protein; Provisional Back     alignment and domain information
>PRK12414 putative aminotransferase; Provisional Back     alignment and domain information
>PRK09082 methionine aminotransferase; Validated Back     alignment and domain information
>PRK06348 aspartate aminotransferase; Provisional Back     alignment and domain information
>PRK08912 hypothetical protein; Provisional Back     alignment and domain information
>PLN02724 Molybdenum cofactor sulfurase Back     alignment and domain information
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional Back     alignment and domain information
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase Back     alignment and domain information
>PRK06207 aspartate aminotransferase; Provisional Back     alignment and domain information
>PLN02483 serine palmitoyltransferase Back     alignment and domain information
>TIGR00858 bioF 8-amino-7-oxononanoate synthase Back     alignment and domain information
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits Back     alignment and domain information
>PRK09276 LL-diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>PRK06290 aspartate aminotransferase; Provisional Back     alignment and domain information
>PRK07683 aminotransferase A; Validated Back     alignment and domain information
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional Back     alignment and domain information
>PRK05942 aspartate aminotransferase; Provisional Back     alignment and domain information
>PRK07777 aminotransferase; Validated Back     alignment and domain information
>PRK07309 aromatic amino acid aminotransferase; Validated Back     alignment and domain information
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase Back     alignment and domain information
>PRK08068 transaminase; Reviewed Back     alignment and domain information
>PRK07550 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA Back     alignment and domain information
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed Back     alignment and domain information
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism] Back     alignment and domain information
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only] Back     alignment and domain information
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional Back     alignment and domain information
>TIGR03537 DapC succinyldiaminopimelate transaminase Back     alignment and domain information
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme Back     alignment and domain information
>PRK08636 aspartate aminotransferase; Provisional Back     alignment and domain information
>PTZ00377 alanine aminotransferase; Provisional Back     alignment and domain information
>PRK08363 alanine aminotransferase; Validated Back     alignment and domain information
>PRK05764 aspartate aminotransferase; Provisional Back     alignment and domain information
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative Back     alignment and domain information
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn) Back     alignment and domain information
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional Back     alignment and domain information
>PLN02656 tyrosine transaminase Back     alignment and domain information
>PLN03026 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PLN02187 rooty/superroot1 Back     alignment and domain information
>PRK09147 succinyldiaminopimelate transaminase; Provisional Back     alignment and domain information
>PRK14807 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK04870 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK02769 histidine decarboxylase; Provisional Back     alignment and domain information
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase Back     alignment and domain information
>PRK05387 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK04366 glycine dehydrogenase subunit 2; Validated Back     alignment and domain information
>PRK01533 histidinol-phosphate aminotransferase; Validated Back     alignment and domain information
>PRK09148 aminotransferase; Validated Back     alignment and domain information
>cd06502 TA_like Low-specificity threonine aldolase (TA) Back     alignment and domain information
>PRK06107 aspartate aminotransferase; Provisional Back     alignment and domain information
>PTZ00433 tyrosine aminotransferase; Provisional Back     alignment and domain information
>TIGR01141 hisC histidinol-phosphate aminotransferase Back     alignment and domain information
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase Back     alignment and domain information
>PLN02721 threonine aldolase Back     alignment and domain information
>PRK02731 histidinol-phosphate aminotransferase; Validated Back     alignment and domain information
>PLN02822 serine palmitoyltransferase Back     alignment and domain information
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional Back     alignment and domain information
>PRK03158 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK03317 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK07324 transaminase; Validated Back     alignment and domain information
>PRK08153 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK03080 phosphoserine aminotransferase; Provisional Back     alignment and domain information
>PRK13392 5-aminolevulinate synthase; Provisional Back     alignment and domain information
>PRK09265 aminotransferase AlaT; Validated Back     alignment and domain information
>PRK09105 putative aminotransferase; Provisional Back     alignment and domain information
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases Back     alignment and domain information
>PRK08175 aminotransferase; Validated Back     alignment and domain information
>PRK06855 aminotransferase; Validated Back     alignment and domain information
>PLN03227 serine palmitoyltransferase-like protein; Provisional Back     alignment and domain information
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase Back     alignment and domain information
>PLN02450 1-aminocyclopropane-1-carboxylate synthase Back     alignment and domain information
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional Back     alignment and domain information
>PLN02376 1-aminocyclopropane-1-carboxylate synthase Back     alignment and domain information
>PRK09064 5-aminolevulinate synthase; Validated Back     alignment and domain information
>PRK00950 histidinol-phosphate aminotransferase; Validated Back     alignment and domain information
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase Back     alignment and domain information
>PRK08056 threonine-phosphate decarboxylase; Provisional Back     alignment and domain information
>cd06450 DOPA_deC_like DOPA decarboxylase family Back     alignment and domain information
>PRK07590 L,L-diaminopimelate aminotransferase; Validated Back     alignment and domain information
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family Back     alignment and domain information
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family Back     alignment and domain information
>PRK00451 glycine dehydrogenase subunit 1; Validated Back     alignment and domain information
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic Back     alignment and domain information
>PLN02231 alanine transaminase Back     alignment and domain information
>PRK10534 L-threonine aldolase; Provisional Back     alignment and domain information
>PRK15481 transcriptional regulatory protein PtsJ; Provisional Back     alignment and domain information
>PRK05166 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions Back     alignment and domain information
>PRK07568 aspartate aminotransferase; Provisional Back     alignment and domain information
>PRK01688 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed Back     alignment and domain information
>PRK13393 5-aminolevulinate synthase; Provisional Back     alignment and domain information
>PRK03321 putative aminotransferase; Provisional Back     alignment and domain information
>PLN03032 serine decarboxylase; Provisional Back     alignment and domain information
>PRK05937 8-amino-7-oxononanoate synthase; Provisional Back     alignment and domain information
>PLN02955 8-amino-7-oxononanoate synthase Back     alignment and domain information
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase Back     alignment and domain information
>PRK07908 hypothetical protein; Provisional Back     alignment and domain information
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue Back     alignment and domain information
>PRK14809 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK02610 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK09275 aspartate aminotransferase; Provisional Back     alignment and domain information
>TIGR01364 serC_1 phosphoserine aminotransferase Back     alignment and domain information
>PRK06836 aspartate aminotransferase; Provisional Back     alignment and domain information
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase Back     alignment and domain information
>TIGR01366 serC_3 phosphoserine aminotransferase, putative Back     alignment and domain information
>cd00609 AAT_like Aspartate aminotransferase family Back     alignment and domain information
>PLN02414 glycine dehydrogenase (decarboxylating) Back     alignment and domain information
>PRK04781 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK06358 threonine-phosphate decarboxylase; Provisional Back     alignment and domain information
>PLN02607 1-aminocyclopropane-1-carboxylate synthase Back     alignment and domain information
>PLN02672 methionine S-methyltransferase Back     alignment and domain information
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase Back     alignment and domain information
>PRK04635 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK13237 tyrosine phenol-lyase; Provisional Back     alignment and domain information
>PRK05839 hypothetical protein; Provisional Back     alignment and domain information
>PRK07392 threonine-phosphate decarboxylase; Validated Back     alignment and domain information
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase Back     alignment and domain information
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional Back     alignment and domain information
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09440 avtA valine--pyruvate transaminase; Provisional Back     alignment and domain information
>cd00615 Orn_deC_like Ornithine decarboxylase family Back     alignment and domain information
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase Back     alignment and domain information
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates [] Back     alignment and domain information
>PRK09257 aromatic amino acid aminotransferase; Provisional Back     alignment and domain information
>PTZ00376 aspartate aminotransferase; Provisional Back     alignment and domain information
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional Back     alignment and domain information
>PRK06425 histidinol-phosphate aminotransferase; Validated Back     alignment and domain information
>PLN02368 alanine transaminase Back     alignment and domain information
>PRK14808 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK03967 histidinol-phosphate aminotransferase; Provisional Back     alignment and domain information
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism] Back     alignment and domain information
>PRK05968 hypothetical protein; Provisional Back     alignment and domain information
>PLN02397 aspartate transaminase Back     alignment and domain information
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase Back     alignment and domain information
>PRK04311 selenocysteine synthase; Provisional Back     alignment and domain information
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06767 methionine gamma-lyase; Provisional Back     alignment and domain information
>PRK15029 arginine decarboxylase; Provisional Back     alignment and domain information
>PLN02880 tyrosine decarboxylase Back     alignment and domain information
>TIGR01328 met_gam_lyase methionine gamma-lyase Back     alignment and domain information
>PRK05367 glycine dehydrogenase; Provisional Back     alignment and domain information
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed Back     alignment and domain information
>PRK06234 methionine gamma-lyase; Provisional Back     alignment and domain information
>PLN02452 phosphoserine transaminase Back     alignment and domain information
>PRK05664 threonine-phosphate decarboxylase; Reviewed Back     alignment and domain information
>PLN02242 methionine gamma-lyase Back     alignment and domain information
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating) Back     alignment and domain information
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic Back     alignment and domain information
>PRK06959 putative threonine-phosphate decarboxylase; Provisional Back     alignment and domain information
>PRK07811 cystathionine gamma-synthase; Provisional Back     alignment and domain information
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed Back     alignment and domain information
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase Back     alignment and domain information
>COG3844 Kynureninase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12566 glycine dehydrogenase; Provisional Back     alignment and domain information
>TIGR00474 selA seryl-tRNA(sec) selenium transferase Back     alignment and domain information
>PRK07505 hypothetical protein; Provisional Back     alignment and domain information
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated Back     alignment and domain information
>PRK07503 methionine gamma-lyase; Provisional Back     alignment and domain information
>PRK08574 cystathionine gamma-synthase; Provisional Back     alignment and domain information
>PRK08064 cystathionine beta-lyase; Provisional Back     alignment and domain information
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis Back     alignment and domain information
>PRK08354 putative aminotransferase; Provisional Back     alignment and domain information
>PRK08861 cystathionine gamma-synthase; Provisional Back     alignment and domain information
>PRK08637 hypothetical protein; Provisional Back     alignment and domain information
>PLN02590 probable tyrosine decarboxylase Back     alignment and domain information
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial Back     alignment and domain information
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase Back     alignment and domain information
>PRK08776 cystathionine gamma-synthase; Provisional Back     alignment and domain information
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional Back     alignment and domain information
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase Back     alignment and domain information
>PRK13578 ornithine decarboxylase; Provisional Back     alignment and domain information
>PRK08247 cystathionine gamma-synthase; Reviewed Back     alignment and domain information
>PRK08249 cystathionine gamma-synthase; Provisional Back     alignment and domain information
>PLN02263 serine decarboxylase Back     alignment and domain information
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional Back     alignment and domain information
>cd00610 OAT_like Acetyl ornithine aminotransferase family Back     alignment and domain information
>PRK08045 cystathionine gamma-synthase; Provisional Back     alignment and domain information
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type Back     alignment and domain information
>PRK07050 cystathionine beta-lyase; Provisional Back     alignment and domain information
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated Back     alignment and domain information
>PRK15400 lysine decarboxylase CadA; Provisional Back     alignment and domain information
>PRK06460 hypothetical protein; Provisional Back     alignment and domain information
>PRK03244 argD acetylornithine aminotransferase; Provisional Back     alignment and domain information
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases Back     alignment and domain information
>PLN02509 cystathionine beta-lyase Back     alignment and domain information
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only] Back     alignment and domain information
>PRK07269 cystathionine gamma-synthase; Reviewed Back     alignment and domain information
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase Back     alignment and domain information
>PRK15399 lysine decarboxylase LdcC; Provisional Back     alignment and domain information
>PRK01278 argD acetylornithine transaminase protein; Provisional Back     alignment and domain information
>PRK05939 hypothetical protein; Provisional Back     alignment and domain information
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08114 cystathionine beta-lyase; Provisional Back     alignment and domain information
>PLN02414 glycine dehydrogenase (decarboxylating) Back     alignment and domain information
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated Back     alignment and domain information
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated Back     alignment and domain information
>TIGR01885 Orn_aminotrans ornithine aminotransferase Back     alignment and domain information
>PRK09028 cystathionine beta-lyase; Provisional Back     alignment and domain information
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated Back     alignment and domain information
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated Back     alignment and domain information
>PRK07582 cystathionine gamma-lyase; Validated Back     alignment and domain information
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated Back     alignment and domain information
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated Back     alignment and domain information
>TIGR03246 arg_catab_astC succinylornithine transaminase family Back     alignment and domain information
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated Back     alignment and domain information
>PRK07671 cystathionine beta-lyase; Provisional Back     alignment and domain information
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00125 ornithine aminotransferase-like protein; Provisional Back     alignment and domain information
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated Back     alignment and domain information
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK12462 phosphoserine aminotransferase; Provisional Back     alignment and domain information
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06434 cystathionine gamma-lyase; Validated Back     alignment and domain information
>PRK05967 cystathionine beta-lyase; Provisional Back     alignment and domain information
>PRK02627 acetylornithine aminotransferase; Provisional Back     alignment and domain information
>PRK02936 argD acetylornithine aminotransferase; Provisional Back     alignment and domain information
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed Back     alignment and domain information
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase Back     alignment and domain information
>PRK07049 methionine gamma-lyase; Validated Back     alignment and domain information
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional Back     alignment and domain information
>PRK05367 glycine dehydrogenase; Provisional Back     alignment and domain information
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal) Back     alignment and domain information
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes Back     alignment and domain information
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases Back     alignment and domain information
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase Back     alignment and domain information
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism] Back     alignment and domain information
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal) Back     alignment and domain information
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK04260 acetylornithine aminotransferase; Provisional Back     alignment and domain information
>PLN02624 ornithine-delta-aminotransferase Back     alignment and domain information
>PRK03715 argD acetylornithine transaminase protein; Provisional Back     alignment and domain information
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [] Back     alignment and domain information
>PLN02760 4-aminobutyrate:pyruvate transaminase Back     alignment and domain information
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional Back     alignment and domain information
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PLN00144 acetylornithine transaminase Back     alignment and domain information
>PRK04612 argD acetylornithine transaminase protein; Provisional Back     alignment and domain information
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08117 4-aminobutyrate aminotransferase; Provisional Back     alignment and domain information
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12403 putative aminotransferase; Provisional Back     alignment and domain information
>PRK08360 4-aminobutyrate aminotransferase; Provisional Back     alignment and domain information
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08088 4-aminobutyrate aminotransferase; Validated Back     alignment and domain information
>PRK09792 4-aminobutyrate transaminase; Provisional Back     alignment and domain information
>PRK13360 omega amino acid--pyruvate transaminase; Provisional Back     alignment and domain information
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional Back     alignment and domain information
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional Back     alignment and domain information
>TIGR03372 putres_am_tran putrescine aminotransferase Back     alignment and domain information
>PRK06058 4-aminobutyrate aminotransferase; Provisional Back     alignment and domain information
>PRK09221 beta alanine--pyruvate transaminase; Provisional Back     alignment and domain information
>PRK07495 4-aminobutyrate aminotransferase; Provisional Back     alignment and domain information
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated Back     alignment and domain information
>PRK06541 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating) Back     alignment and domain information
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism] Back     alignment and domain information
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional Back     alignment and domain information
>PRK06777 4-aminobutyrate aminotransferase; Provisional Back     alignment and domain information
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated Back     alignment and domain information
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08593 4-aminobutyrate aminotransferase; Provisional Back     alignment and domain information
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type Back     alignment and domain information
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional Back     alignment and domain information
>PRK06105 aminotransferase; Provisional Back     alignment and domain information
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase Back     alignment and domain information
>PRK06062 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase Back     alignment and domain information
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type Back     alignment and domain information
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases Back     alignment and domain information
>PRK05769 4-aminobutyrate aminotransferase; Provisional Back     alignment and domain information
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional Back     alignment and domain information
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional Back     alignment and domain information
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05965 hypothetical protein; Provisional Back     alignment and domain information
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07678 aminotransferase; Validated Back     alignment and domain information
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1 Back     alignment and domain information
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism] Back     alignment and domain information
>PRK06918 4-aminobutyrate aminotransferase; Reviewed Back     alignment and domain information
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07046 aminotransferase; Validated Back     alignment and domain information
>PRK07480 putative aminotransferase; Validated Back     alignment and domain information
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional Back     alignment and domain information
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional Back     alignment and domain information
>PRK06082 4-aminobutyrate aminotransferase; Provisional Back     alignment and domain information
>PRK07482 hypothetical protein; Provisional Back     alignment and domain information
>PRK06149 hypothetical protein; Provisional Back     alignment and domain information
>PRK05639 4-aminobutyrate aminotransferase; Provisional Back     alignment and domain information
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases Back     alignment and domain information
>PRK06917 hypothetical protein; Provisional Back     alignment and domain information
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor Back     alignment and domain information
>PRK07481 hypothetical protein; Provisional Back     alignment and domain information
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase Back     alignment and domain information
>PRK07036 hypothetical protein; Provisional Back     alignment and domain information
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional Back     alignment and domain information
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional Back     alignment and domain information
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional Back     alignment and domain information
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07483 hypothetical protein; Provisional Back     alignment and domain information
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional Back     alignment and domain information
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional Back     alignment and domain information
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type Back     alignment and domain information
>PRK06148 hypothetical protein; Provisional Back     alignment and domain information
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism] Back     alignment and domain information
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional Back     alignment and domain information
>TIGR03251 LAT_fam L-lysine 6-transaminase Back     alignment and domain information
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) Back     alignment and domain information
>PRK08297 L-lysine aminotransferase; Provisional Back     alignment and domain information
>PRK12566 glycine dehydrogenase; Provisional Back     alignment and domain information
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase Back     alignment and domain information
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue Back     alignment and domain information
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only] Back     alignment and domain information
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species Back     alignment and domain information
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02994 1-aminocyclopropane-1-carboxylate synthase Back     alignment and domain information
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK09375 quinolinate synthetase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query519
3ou5_A490 Human Mitochondrial Serine Hydroxymethyltransferase 1e-171
1bj4_A470 Recombinant Serine Hydroxymethyltransferase (human) 1e-156
1ls3_B483 Crystal Structure Of The Complex Between Rabbit Cyt 1e-156
1cj0_A470 Crystal Structure Of Rabbit Cytosolic Serine Hydrox 1e-155
1rvu_A483 E75q Mutant Of Rabbit Cytosolic Serine Hydroxymethy 1e-155
1rv3_A483 E75l Mutant Of Rabbit Cytosolic Serine Hydroxymethy 1e-155
1eji_A478 Recombinant Serine Hydroxymethyltransferase (Mouse) 1e-153
2dkj_A407 Crystal Structure Of T.Th.Hb8 Serine Hydroxymethylt 5e-95
3pgy_A415 Serine Hydroxymethyltransferase From Staphylococcus 1e-93
1dfo_A417 Crystal Structure At 2.4 Angstrom Resolution Of E. 3e-93
1eqb_A417 X-Ray Crystal Structure At 2.7 Angstroms Resolution 8e-93
3g8m_A417 Serine Hydroxymethyltransferase Y55f Mutant Length 8e-93
1kkj_A419 Crystal Structure Of Serine Hydroxymethyltransferas 2e-92
2vgs_A407 Crystal Structure Of E53qbsshmt Internal Aldimine L 3e-92
2vmv_A405 Crystal Structure Of F351gbsshmt Internal Aldimine 3e-92
2vi8_A405 Crystal Structure Of S172absshmt Internal Aldimine 3e-92
2w7d_A405 Crystal Structure Of Y51fbsshmt Internal Aldimine L 3e-92
1yjs_A419 K226q Mutant Of Serine Hydroxymethyltransferase Fro 4e-92
1yjy_A419 K226m Mutant Of Serine Hydroxymethyltransferase Fro 8e-92
2vmn_A405 Crystal Structure Of N341absshmt Internal Aldimine 1e-91
2w7i_A405 Crystal Structure Of Y61absshmt Internal Aldimine L 1e-91
2vmr_A405 Crystal Structure Of Y60absshmt Internal Aldimine L 1e-91
3n0l_A417 Crystal Structure Of Serine Hydroxymethyltransferas 1e-89
3gbx_A420 Serine Hydroxymethyltransferase From Salmonella Typ 8e-87
3h7f_A447 Crystal Structure Of Serine Hydroxymethyltransferas 2e-86
3ecd_A425 Crystal Structure Of Serine Hydroxymethyltransferas 5e-85
>pdb|3OU5|A Chain A, Human Mitochondrial Serine Hydroxymethyltransferase 2 Length = 490 Back     alignment and structure 
Iteration: 1

 Score =  597 bits (1539), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 278/442 (62%), Positives = 347/442 (78%), Gaps = 3/442 (0%)
Query: 72  KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
           K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D  E LCQ+RA
Sbjct: 50  KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 109
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
           L+AF LDPA+WGVNVQ  SGSPAN  VYTALL+PH+RIM LDLP GGHL+HGY +D K+I
Sbjct: 110 LEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRI 169
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
           SA SIFFE+MPY+L+  TG IDY QL  +A LFRP+LI+AG SAYARL DYAR+R+VCD+
Sbjct: 170 SATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDE 229
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQ 310
            KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+LRG R  +IF+RKGVK ++ K 
Sbjct: 230 VKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKT 289
Query: 311 GQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370
           G+E+ Y +ED+IN AVFP LQGGPHNH I+ +AVALKQ  TP ++ Y  QVL N+   A 
Sbjct: 290 GREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMAD 349
Query: 371 SLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGG 430
           +LLERGY LVSGGT+NHLVLV+LR KG+DG+R E+VLE V I ANKNT PGD SA+ PGG
Sbjct: 350 ALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGG 409
Query: 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSE 490
           +R+G PALTSR F E+DF +V +F D  V + L++K  +K  KL+DF + L+ D      
Sbjct: 410 LRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVK--SKTAKLQDFKSFLLKDSETSQR 467
Query: 491 ISNLRDKVEEYAKRFPTVGFEK 512
           ++NLR +VE++A+ FP  GF++
Sbjct: 468 LANLRQRVEQFARAFPMPGFDE 489
>pdb|1BJ4|A Chain A, Recombinant Serine Hydroxymethyltransferase (human) Length = 470 Back     alignment and structure
>pdb|1LS3|B Chain B, Crystal Structure Of The Complex Between Rabbit Cytosolic Serine Hydroxymethyltransferase And Triglu-5-Formyl-Tetrahydrofolate Length = 483 Back     alignment and structure
>pdb|1CJ0|A Chain A, Crystal Structure Of Rabbit Cytosolic Serine Hydroxymethyltransferase At 2.8 Angstrom Resolution Length = 470 Back     alignment and structure
>pdb|1RVU|A Chain A, E75q Mutant Of Rabbit Cytosolic Serine Hydroxymethyltransferase Length = 483 Back     alignment and structure
>pdb|1RV3|A Chain A, E75l Mutant Of Rabbit Cytosolic Serine Hydroxymethyltransferase, Complex With Glycine Length = 483 Back     alignment and structure
>pdb|1EJI|A Chain A, Recombinant Serine Hydroxymethyltransferase (Mouse) Length = 478 Back     alignment and structure
>pdb|2DKJ|A Chain A, Crystal Structure Of T.Th.Hb8 Serine Hydroxymethyltransferase Length = 407 Back     alignment and structure
>pdb|3PGY|A Chain A, Serine Hydroxymethyltransferase From Staphylococcus Aureus, S95p Mutant. Length = 415 Back     alignment and structure
>pdb|1DFO|A Chain A, Crystal Structure At 2.4 Angstrom Resolution Of E. Coli Serine Hydroxymethyltransferase In Complex With Glycine And 5-Formyl Tetrahydrofolate Length = 417 Back     alignment and structure
>pdb|1EQB|A Chain A, X-Ray Crystal Structure At 2.7 Angstroms Resolution Of Ternary Complex Between The Y65f Mutant Of E-Coli Serine Hydroxymethyltransferase, Glycine And 5-Formyl Tetrahydrofolate Length = 417 Back     alignment and structure
>pdb|3G8M|A Chain A, Serine Hydroxymethyltransferase Y55f Mutant Length = 417 Back     alignment and structure
>pdb|1KKJ|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From B.Stearothermophilus Length = 419 Back     alignment and structure
>pdb|2VGS|A Chain A, Crystal Structure Of E53qbsshmt Internal Aldimine Length = 407 Back     alignment and structure
>pdb|2VMV|A Chain A, Crystal Structure Of F351gbsshmt Internal Aldimine Length = 405 Back     alignment and structure
>pdb|2VI8|A Chain A, Crystal Structure Of S172absshmt Internal Aldimine Length = 405 Back     alignment and structure
>pdb|2W7D|A Chain A, Crystal Structure Of Y51fbsshmt Internal Aldimine Length = 405 Back     alignment and structure
>pdb|1YJS|A Chain A, K226q Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus, Complex With Glycine Length = 419 Back     alignment and structure
>pdb|1YJY|A Chain A, K226m Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus, Complex With Serine Length = 419 Back     alignment and structure
>pdb|2VMN|A Chain A, Crystal Structure Of N341absshmt Internal Aldimine Length = 405 Back     alignment and structure
>pdb|2W7I|A Chain A, Crystal Structure Of Y61absshmt Internal Aldimine Length = 405 Back     alignment and structure
>pdb|2VMR|A Chain A, Crystal Structure Of Y60absshmt Internal Aldimine Length = 405 Back     alignment and structure
>pdb|3N0L|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From Campylobacter Jejuni Length = 417 Back     alignment and structure
>pdb|3GBX|A Chain A, Serine Hydroxymethyltransferase From Salmonella Typhimurium Length = 420 Back     alignment and structure
>pdb|3H7F|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From Mycobacterium Tuberculosis Length = 447 Back     alignment and structure
>pdb|3ECD|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From Burkholderia Pseudomallei Length = 425 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query519
1rv3_A483 Serine hydroxymethyltransferase, cytosolic; one-ca 0.0
2a7v_A490 Serine hydroxymethyltransferase; structural genomi 0.0
3gbx_A420 Serine hydroxymethyltransferase; structural genomi 0.0
3ecd_A425 Serine hydroxymethyltransferase 2; ssgcid, decode, 0.0
2vi8_A405 Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, 0.0
2dkj_A407 Serine hydroxymethyltransferase; PLP dependent enz 0.0
3h7f_A447 Serine hydroxymethyltransferase 1; cytoplasm, one- 0.0
3n0l_A417 Serine hydroxymethyltransferase; alpha beta class, 0.0
2ez2_A456 Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend 5e-08
2x3l_A446 ORN/Lys/Arg decarboxylase family protein; lyase; H 4e-06
1ax4_A467 Tryptophanase; tryptophan biosynthesis, tryptophan 4e-05
2vyc_A 755 Biodegradative arginine decarboxylase; pyridoxal p 5e-05
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A* Length = 483 Back     alignment and structure
 Score =  833 bits (2155), Expect = 0.0
 Identities = 273/468 (58%), Positives = 347/468 (74%), Gaps = 2/468 (0%)

Query: 46  PAPWINQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYS 105
            +     L  PL++ D E+ DII+ E  RQ  GLELI SENF S +V++A+GS + NKYS
Sbjct: 14  WSSHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYS 73

Query: 106 EGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKP 165
            GYPG RYYGG E+ID  E+LCQKRAL A+ LDP  WGVNVQ  SGSPANF VYTAL++P
Sbjct: 74  LGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEP 133

Query: 166 HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFR 225
           H RIM LDLP GGHL+HG+ TD KKISA SIFFE+M Y+++  TGYIDY++LE++A LF 
Sbjct: 134 HGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFH 193

Query: 226 PKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTT 285
           PKLI+AG S Y+R  DY R+RK+ D+  A ++ADMAHISGLV AGV+PSPFE+  VVTTT
Sbjct: 194 PKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTT 253

Query: 286 THKSLRGPRGAMIFFRKGVKEIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAV 344
           THK+LRG R  MIF+R+GV+ ++ K G+E++Y  E  IN AVFPGLQGGPHNH I+G+AV
Sbjct: 254 THKTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAV 313

Query: 345 ALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVE 404
           ALKQ  TPE+K YQ QV++N    + +L+E GY +V+GG++NHL+LV+LR+KG DG R E
Sbjct: 314 ALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAE 373

Query: 405 KVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALK 464
           KVLE+  IA NKNT PGD SA+ P G+R+GTPALTSRG +E+DF+KVA F    ++L ++
Sbjct: 374 KVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQ 433

Query: 465 IKGDT-KGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFE 511
           I+ DT     LK+F   L  DE  Q  +  LR +VE +A  FP  G  
Sbjct: 434 IQDDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPGLP 481
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} SCOP: c.67.1.4 PDB: 3ou5_A Length = 490 Back     alignment and structure
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} PDB: 1dfo_A* 3g8m_A* 1eqb_A* Length = 420 Back     alignment and structure
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei} Length = 425 Back     alignment and structure
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ... Length = 405 Back     alignment and structure
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus} Length = 407 Back     alignment and structure
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis} Length = 447 Back     alignment and structure
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} Length = 417 Back     alignment and structure
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A* Length = 456 Back     alignment and structure
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus} Length = 446 Back     alignment and structure
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2 Length = 467 Back     alignment and structure
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli} Length = 755 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query519
3ou5_A490 Serine hydroxymethyltransferase, mitochondrial; st 100.0
2a7v_A490 Serine hydroxymethyltransferase; structural genomi 100.0
1rv3_A483 Serine hydroxymethyltransferase, cytosolic; one-ca 100.0
3h7f_A447 Serine hydroxymethyltransferase 1; cytoplasm, one- 100.0
3n0l_A417 Serine hydroxymethyltransferase; alpha beta class, 100.0
3gbx_A420 Serine hydroxymethyltransferase; structural genomi 100.0
3ecd_A425 Serine hydroxymethyltransferase 2; ssgcid, decode, 100.0
2vi8_A405 Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, 100.0
2dkj_A407 Serine hydroxymethyltransferase; PLP dependent enz 100.0
3zrp_A384 Serine-pyruvate aminotransferase (AGXT); HET: PLP; 99.97
4hvk_A382 Probable cysteine desulfurase 2; transferase and I 99.97
3isl_A416 Purine catabolism protein PUCG; pyridoxalphosphate 99.97
2dr1_A386 PH1308 protein, 386AA long hypothetical serine ami 99.97
3nnk_A411 Ureidoglycine-glyoxylate aminotransferase; PLP-dep 99.97
1iug_A352 Putative aspartate aminotransferase; wild type, py 99.97
3f0h_A376 Aminotransferase; RER070207000802, structural geno 99.97
2huf_A393 Alanine glyoxylate aminotransferase; alpha and bet 99.97
1kmj_A406 Selenocysteine lyase; persulfide perselenide NIFS 99.97
3kgw_A393 Alanine-glyoxylate aminotransferase; AAH25799.1, p 99.97
3lvm_A423 Cysteine desulfurase; structural genomics, montrea 99.96
2yrr_A353 Aminotransferase, class V; structural genomics, NP 99.96
1t3i_A420 Probable cysteine desulfurase; PLP-binding enzyme, 99.96
1vjo_A393 Alanine--glyoxylate aminotransferase; 17130350, AL 99.96
1gd9_A389 Aspartate aminotransferase; pyridoxal enzyme, temp 99.96
2z9v_A392 Aspartate aminotransferase; pyridoxamine, pyruvate 99.96
3tqx_A399 2-amino-3-ketobutyrate coenzyme A ligase; energy m 99.96
2ch1_A396 3-hydroxykynurenine transaminase; PLP-enzyme, kynu 99.96
3cai_A406 Possible aminotransferase; RV3778C; 1.80A {Mycobac 99.96
3dzz_A391 Putative pyridoxal 5'-phosphate-dependent C-S LYA; 99.96
4eb5_A382 Probable cysteine desulfurase 2; scaffold, transfe 99.96
1m32_A366 2-aminoethylphosphonate-pyruvate aminotransferase; 99.96
3get_A365 Histidinol-phosphate aminotransferase; NP_281508.1 99.96
3f9t_A397 TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L 99.96
1eg5_A384 Aminotransferase; PLP-dependent enzymes, iron-sulf 99.96
3h14_A391 Aminotransferase, classes I and II; YP_167802.1, S 99.96
1elu_A390 L-cysteine/L-cystine C-S lyase; FES cluster biosyn 99.96
1b5p_A385 Protein (aspartate aminotransferase); pyridoxal en 99.96
4dq6_A391 Putative pyridoxal phosphate-dependent transferas; 99.96
3kax_A383 Aminotransferase, classes I and II; PLP, C-S lyase 99.96
2w8t_A427 SPT, serine palmitoyltransferase; HET: LLP; 1.25A 99.96
3ffr_A362 Phosphoserine aminotransferase SERC; structural ge 99.96
3ffh_A363 Histidinol-phosphate aminotransferase; APC88260, l 99.96
1j32_A388 Aspartate aminotransferase; HET: PLP; 2.10A {Phorm 99.96
3ly1_A354 Putative histidinol-phosphate aminotransferase; st 99.96
1fc4_A401 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino 99.96
3l8a_A421 METC, putative aminotransferase, probable beta-cys 99.96
1bs0_A384 Protein (8-amino-7-oxonanoate synthase); PLP-depen 99.96
2bkw_A385 Alanine-glyoxylate aminotransferase 1; analine-gly 99.96
3euc_A367 Histidinol-phosphate aminotransferase 2; YP_297314 99.95
1v2d_A381 Glutamine aminotransferase; PLP, riken structural 99.95
3vax_A400 Putative uncharacterized protein DNDA; desulfurase 99.95
3hbx_A502 GAD 1, glutamate decarboxylase 1; calmodulin-bindi 99.95
2z61_A370 Probable aspartate aminotransferase 2; amino acid 99.95
3g0t_A437 Putative aminotransferase; NP_905498.1, putative a 99.95
2dou_A376 Probable N-succinyldiaminopimelate aminotransfera; 99.95
2o0r_A411 RV0858C (N-succinyldiaminopimelate aminotransfera; 99.95
1o4s_A389 Aspartate aminotransferase; TM1255, structural gen 99.95
1xi9_A406 Putative transaminase; alanine aminotransferase, s 99.95
2gb3_A409 Aspartate aminotransferase; TM1698, structural gen 99.95
3kki_A409 CAI-1 autoinducer synthase; quorum sensing, CQSA, 99.95
1c7n_A399 Cystalysin; transferase, aminotransferase, pyridox 99.95
1u08_A386 Hypothetical aminotransferase YBDL; alpha beta pro 99.95
3cq5_A369 Histidinol-phosphate aminotransferase; PLP, PMP, a 99.95
2e7j_A371 SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st 99.95
3nra_A407 Aspartate aminotransferase; structural genomics, j 99.95
2x5d_A412 Probable aminotransferase; HET: LLP PLP; 2.25A {Ps 99.95
3ele_A398 Amino transferase; RER070207001803, structural gen 99.95
1yiz_A429 Kynurenine aminotransferase; glutamine transaminas 99.95
3dr4_A391 Putative perosamine synthetase; deoxysugar, pyrido 99.95
1d2f_A390 MALY protein; aminotransferase fold, large PLP-bin 99.95
3p1t_A337 Putative histidinol-phosphate aminotransferase; PL 99.95
3fvs_A422 Kynurenine--oxoglutarate transaminase 1; alpha bet 99.95
3e9k_A465 Kynureninase; kynurenine-L-hydrolase, kynurenine h 99.95
2dgk_A452 GAD-beta, GADB, glutamate decarboxylase beta; gadb 99.95
3fdb_A377 Beta C-S lyase, putative PLP-dependent beta-cystat 99.95
3jtx_A396 Aminotransferase; NP_283882.1, structural genomics 99.95
2c0r_A362 PSAT, phosphoserine aminotransferase; pyridoxal-5' 99.95
3a2b_A398 Serine palmitoyltransferase; vitamin B6-dependent 99.95
3ke3_A379 Putative serine-pyruvate aminotransferase; structu 99.95
3e77_A377 Phosphoserine aminotransferase; SERC, PLP, structu 99.94
2o1b_A404 Aminotransferase, class I; aminotrasferase; HET: P 99.94
3mc6_A497 Sphingosine-1-phosphate lyase; carboxy-lyase activ 99.94
2zc0_A407 Alanine glyoxylate transaminase; alanine:glyoxylat 99.94
1b9h_A388 AHBA synthase, protein (3-amino-5-hydroxybenzoic a 99.94
3dyd_A427 Tyrosine aminotransferase; PLP, SGC, structural ge 99.94
1qz9_A416 Kynureninase; kynurenine, tryptophan, PLP, vitamin 99.94
3aow_A448 Putative uncharacterized protein PH0207; protein-P 99.94
2zyj_A397 Alpha-aminodipate aminotransferase; alpha-aminoadi 99.94
3a9z_A432 Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph 99.94
3m5u_A361 Phosphoserine aminotransferase; alpha-beta half sa 99.94
3b46_A447 Aminotransferase BNA3; kynurenine aminotransferase 99.94
3e2y_A410 Kynurenine-oxoglutarate transaminase 3; alpha beta 99.94
3ju7_A377 Putative PLP-dependent aminotransferase; NP_978343 99.94
3hdo_A360 Histidinol-phosphate aminotransferase; PSI-II, his 99.94
3qm2_A386 Phosphoserine aminotransferase; structural genomic 99.94
3qgu_A449 LL-diaminopimelate aminotransferase; L-lysine, pyr 99.94
2bwn_A401 5-aminolevulinate synthase; tetrapyrrole biosynthe 99.94
3frk_A373 QDTB; aminotransferase, sugar-modification, natura 99.94
3uwc_A374 Nucleotide-sugar aminotransferase; lipopolysacchar 99.94
1wyu_B474 Glycine dehydrogenase subunit 2 (P-protein); alpha 99.94
3mad_A514 Sphingosine-1-phosphate lyase; carboxy-lyase activ 99.94
1iay_A428 ACC synthase 2, 1-aminocyclopropane-1-carboxylate 99.94
1c4k_A 730 Protein (ornithine decarboxylase); lyase; HET: PLP 99.94
2oga_A399 Transaminase; PLP-dependent enzyme, desosamine, de 99.94
3ezs_A376 Aminotransferase ASPB; NP_207418.1, structural gen 99.93
2fnu_A375 Aminotransferase; protein-product complex, structu 99.93
3piu_A435 1-aminocyclopropane-1-carboxylate synthase; fruit 99.93
1vp4_A425 Aminotransferase, putative; structural genomics, j 99.93
1w23_A360 Phosphoserine aminotransferase; pyridoxal-5'-phosp 99.93
1jg8_A347 L-ALLO-threonine aldolase; glycine biosynthesis, p 99.93
3if2_A444 Aminotransferase; YP_265399.1, structura genomics, 99.93
1o69_A394 Aminotransferase; structural genomics, unknown fun 99.93
1mdo_A393 ARNB aminotransferase; type 1 aminotransferase fol 99.93
3nyt_A367 Aminotransferase WBPE; PLP binding, nucleotide-sug 99.93
3rq1_A418 Aminotransferase class I and II; structural genomi 99.93
2c81_A418 Glutamine-2-deoxy-scyllo-inosose aminotransferase; 99.93
1bw0_A416 TAT, protein (tyrosine aminotransferase); tyrosine 99.93
1v72_A356 Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2 99.93
3vp6_A511 Glutamate decarboxylase 1; catalytic loop SWAP, ly 99.93
3ftb_A361 Histidinol-phosphate aminotransferase; structural 99.93
2r2n_A425 Kynurenine/alpha-aminoadipate aminotransferase mit 99.93
3ez1_A423 Aminotransferase MOCR family; YP_604413.1, struct 99.92
3hvy_A427 Cystathionine beta-lyase family protein, YNBB B.S 99.92
3ei9_A432 LL-diaminopimelate aminotransferase; lysine biosyn 99.92
1svv_A359 Threonine aldolase; structural genomics, structura 99.92
2po3_A424 4-dehydrase; external aldimine, PLP, aminotransfer 99.92
3g7q_A417 Valine-pyruvate aminotransferase; NP_462565.1, str 99.92
1fg7_A356 Histidinol phosphate aminotransferase; HISC, histi 99.92
3b8x_A390 WBDK, pyridoxamine 5-phosphate-dependent dehydrase 99.92
3tcm_A500 Alanine aminotransferase 2; pyridoxal phosphate (P 99.92
1lc5_A364 COBD, L-threonine-O-3-phosphate decarboxylase; PLP 99.92
2vyc_A755 Biodegradative arginine decarboxylase; pyridoxal p 99.92
3t18_A413 Aminotransferase class I and II; PSI-biology, MCSG 99.92
2x5f_A430 Aspartate_tyrosine_phenylalanine pyridoxal-5' phos 99.92
2z67_A456 O-phosphoseryl-tRNA(SEC) selenium transferase; sel 99.92
4e1o_A481 HDC, histidine decarboxylase; lyase; HET: PLP PVH; 99.92
3op7_A375 Aminotransferase class I and II; PLP-dependent tra 99.92
2aeu_A374 Hypothetical protein MJ0158; selenocysteine syntha 99.91
3asa_A400 LL-diaminopimelate aminotransferase; PLP dependent 99.91
3d6k_A422 Putative aminotransferase; APC82464, corynebacteri 99.91
3k40_A475 Aromatic-L-amino-acid decarboxylase; PLP dependent 99.91
3ppl_A427 Aspartate aminotransferase; dimer, PLP-dependent t 99.91
3ihj_A498 Alanine aminotransferase 2; helix, structural geno 99.91
1wyu_A438 Glycine dehydrogenase (decarboxylating) subunit 1; 99.91
3pj0_A359 LMO0305 protein; structural genomics, joint center 99.91
2fyf_A398 PSAT, phosphoserine aminotransferase; PLP-dependen 99.91
2x3l_A446 ORN/Lys/Arg decarboxylase family protein; lyase; H 99.91
3bb8_A437 CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat 99.91
3b1d_A392 Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ 99.84
3fkd_A350 L-threonine-O-3-phosphate decarboxylase; structura 99.9
3i16_A427 Aluminum resistance protein; YP_878183.1, carbon-s 99.9
4f4e_A420 Aromatic-amino-acid aminotransferase; ssgcid, stru 99.9
2okj_A504 Glutamate decarboxylase 1; PLP-dependent decarboxy 99.9
2qma_A497 Diaminobutyrate-pyruvate transaminase and L-2,4- d 99.9
2ez2_A456 Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend 99.9
2jis_A515 Cysteine sulfinic acid decarboxylase; pyridoxal ph 99.9
1js3_A486 DDC;, DOPA decarboxylase; carbidopa, parkinson'S d 99.9
1uu1_A335 Histidinol-phosphate aminotransferase; histidine b 99.9
3lws_A357 Aromatic amino acid beta-eliminating lyase/threoni 99.9
7aat_A401 Aspartate aminotransferase; transferase(aminotrans 99.89
3ruy_A392 Ornithine aminotransferase; structural genomics, c 99.89
3fsl_A397 Aromatic-amino-acid aminotransferase; tyrosine ami 99.89
2eh6_A375 Acoat, acetylornithine aminotransferase; ARGD, str 99.89
1gc0_A398 Methionine gamma-lyase; pyridoxal-5'-phosphate; HE 99.89
3f6t_A533 Aspartate aminotransferase; YP_194538.1, STRU geno 99.89
1ax4_A467 Tryptophanase; tryptophan biosynthesis, tryptophan 99.89
2rfv_A398 Methionine gamma-lyase; pyridoxal-5'-phosphate, PL 99.89
3jzl_A409 Putative cystathionine beta-lyase involved in ALU 99.89
1pff_A331 Methionine gamma-lyase; homocysteine; 2.50A {Trich 99.89
3k7y_A405 Aspartate aminotransferase; aminotrans pyridoxal p 99.89
1yaa_A412 Aspartate aminotransferase; HET: PLP; 2.05A {Sacch 99.89
3n75_A715 LDC, lysine decarboxylase, inducible; pyridoxal-5' 99.88
1ajs_A412 Aspartate aminotransferase; PIG, in the presence o 99.88
4eu1_A409 Mitochondrial aspartate aminotransferase; ssgcid, 99.88
1vef_A395 Acetylornithine/acetyl-lysine aminotransferase; PL 99.88
1s0a_A429 Adenosylmethionine-8-amino-7-oxononanoate aminotra 99.87
3meb_A448 Aspartate aminotransferase; pyridoxal PHOS transfe 99.87
2q7w_A396 Aspartate aminotransferase; mechanism-based inhibi 99.87
3ht4_A431 Aluminum resistance protein; lyase, putative cysta 99.87
1qgn_A445 Protein (cystathionine gamma-synthase); methionine 99.87
2oqx_A467 Tryptophanase; lyase, pyridoxal phosphate, tryptop 99.87
2zy4_A546 L-aspartate beta-decarboxylase; pyridoxal 5'-phosp 99.87
2ay1_A394 Aroat, aromatic amino acid aminotransferase; HET: 99.87
2cb1_A412 O-acetyl homoserine sulfhydrylase; PLP enzyme, lya 99.87
2oat_A439 Ornithine aminotransferase; 5-fluoromethylornithin 99.87
4adb_A406 Succinylornithine transaminase; transferase, PLP e 99.86
1z7d_A433 Ornithine aminotransferase; structural genomics co 99.86
2eo5_A419 419AA long hypothetical aminotransferase; PLP enzy 99.86
1sff_A426 4-aminobutyrate aminotransferase; enzyme complexes 99.86
1cs1_A386 CGS, protein (cystathionine gamma-synthase); lyase 99.86
1e5e_A404 MGL, methionine gamma-lyase; methionine biosynthes 99.86
3i4j_A430 Aminotransferase, class III; structural GENOMICS,N 99.86
3ndn_A414 O-succinylhomoserine sulfhydrylase; seattle struct 99.86
3cog_A403 Cystathionine gamma-lyase; CTH, PLP, propargylglyc 99.85
2ord_A397 Acoat, acetylornithine aminotransferase; TM1785, a 99.85
2fq6_A415 Cystathionine beta-lyase; protein-inhibitor comple 99.85
3qhx_A392 Cystathionine gamma-synthase METB (CGS); structura 99.85
2pb2_A420 Acetylornithine/succinyldiaminopimelate aminotran; 99.85
3ri6_A430 O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate 99.85
1n8p_A393 Cystathionine gamma-lyase; three open alpha/beta s 99.85
4h51_A420 Aspartate aminotransferase; ssgcid, structural gen 99.84
3a8u_X449 Omega-amino acid--pyruvate aminotransferase; large 99.84
3gju_A460 Putative aminotransferase; pyridoxal phosphate, PL 99.84
3nx3_A395 Acoat, acetylornithine aminotransferase; csgid, st 99.84
3dxv_A439 Alpha-amino-epsilon-caprolactam racemase; fold-TYP 99.83
1zod_A433 DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, 99.83
1ibj_A464 CBL, cystathionine beta-lyase; PLP-dependent enzym 99.83
3n5m_A452 Adenosylmethionine-8-amino-7-oxononanoate aminotr; 99.83
3acz_A389 Methionine gamma-lyase; L-methionine; HET: LLP; 1. 99.82
4a6r_A459 Omega transaminase; transferase, PLP-binding enzym 99.82
3tfu_A457 Adenosylmethionine-8-amino-7-oxononanoate aminotr; 99.82
3bwn_A391 AT1G70560, L-tryptophan aminotransferase; auxin sy 99.82
2ctz_A421 O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac 99.81
3i5t_A476 Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N 99.81
3hmu_A472 Aminotransferase, class III; structural genomics, 99.8
3dod_A448 Adenosylmethionine-8-amino-7-oxononanoate aminotr; 99.8
3l44_A434 Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha 99.8
3bc8_A450 O-phosphoseryl-tRNA(SEC) selenium transferase; dis 99.8
3nmy_A400 Xometc, cystathionine gamma-lyase-like protein; Cy 99.79
3fq8_A427 Glutamate-1-semialdehyde 2,1-aminomutase; drug res 99.79
3hl2_A501 O-phosphoseryl-tRNA(SEC) selenium transferase; sel 99.79
2hox_A427 ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA 99.78
2cjg_A449 L-lysine-epsilon aminotransferase; internal aldimi 99.78
2epj_A434 Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy 99.78
3k28_A429 Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn 99.78
2e7u_A424 Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy 99.77
3oks_A451 4-aminobutyrate transaminase; ssgcid, transferase, 99.76
2cy8_A453 D-phgat, D-phenylglycine aminotransferase; structu 99.76
4ffc_A453 4-aminobutyrate aminotransferase (GABT); structura 99.76
4e77_A429 Glutamate-1-semialdehyde 2,1-aminomutase; structur 99.75
1ohv_A472 4-aminobutyrate aminotransferase; PLP-dependent en 99.68
2yky_A465 Beta-transaminase; transferase; HET: PLP SFE; 1.69 99.36
4ao9_A454 Beta-phenylalanine aminotransferase; HET: PLP; 1.5 99.52
4atq_A456 4-aminobutyrate transaminase; transferase; HET: PL 99.46
4e3q_A473 Pyruvate transaminase; aminotransferase, transfera 99.33
4a0g_A831 Adenosylmethionine-8-amino-7-oxononanoate aminotra 99.16
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.6e-101  Score=775.15  Aligned_cols=457  Identities=62%  Similarity=1.049  Sum_probs=394.7

Q ss_pred             hhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 010058           54 NAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD  133 (519)
Q Consensus        54 ~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~  133 (519)
                      +..|++.||+++++|++|..||+++|+||||||++|+.|++|+++.|+|+|+|||||.|||+||+++|++|.+|++++++
T Consensus        32 ~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~  111 (490)
T 3ou5_A           32 QESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE  111 (490)
T ss_dssp             CCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHH
T ss_pred             ccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHH
Confidence            57799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCC
Q 010058          134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYID  213 (519)
Q Consensus       134 ~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD  213 (519)
                      +||+++++|+||||++||++||++++.+|++|||+|+.+++++|||++||+......++++|..++.++|++|++++.||
T Consensus       112 lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~ID  191 (490)
T 3ou5_A          112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLID  191 (490)
T ss_dssp             HTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTTTEEC
T ss_pred             HhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCccc
Confidence            99999999999999999999999999999999999999999999999999877666889999999999999999999999


Q ss_pred             HHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCC
Q 010058          214 YEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP  293 (519)
Q Consensus       214 ~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gp  293 (519)
                      +|++++.+.++|||+|+++.|+|++.+|++++++||++.|++|++|+||.+|+++.+++++|++++|++|+||||+|+||
T Consensus       192 yd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTLrGP  271 (490)
T 3ou5_A          192 YNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGA  271 (490)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTTCSC
T ss_pred             HHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcceEEeeccccccc-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH
Q 010058          294 RGAMIFFRKGVKEIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL  372 (519)
Q Consensus       294 rgG~i~~~~~~~~~~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L  372 (519)
                      |||+|+++++.+... ..|....+++.++|++++||+.||+|++|.|+|+++|++++..++|++|++|+.+|++.|++.|
T Consensus       272 rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L  351 (490)
T 3ou5_A          272 RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADAL  351 (490)
T ss_dssp             SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHH
Confidence            999999998754322 4455566688999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHH
Q 010058          373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVA  452 (519)
Q Consensus       373 ~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~  452 (519)
                      .+.|+++++++|++|++++|+++.++++.++++.|+++||.+|+|.+|+|.++..+++||||++++|+|||+++||++++
T Consensus       352 ~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA  431 (490)
T 3ou5_A          352 LERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVV  431 (490)
T ss_dssp             HHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHH
T ss_pred             HhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCCCCc
Q 010058          453 EFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFEK  512 (519)
Q Consensus       453 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~~  512 (519)
                      ++|.+++...++++++. + +++||+..+..+.+..+.++++|++|.+||++||+|+||+
T Consensus       432 ~~I~~~l~~~~~~~~~~-~-kl~~f~~~~~~~~~~~~~i~~lr~~V~~l~~~FP~pg~d~  489 (490)
T 3ou5_A          432 DFIDEGVNIGLEVKSKT-A-KLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE  489 (490)
T ss_dssp             HHHHHHHHHHHHHHHTC-C-SHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTTSCCSSCSC
T ss_pred             HHHHHHHHhhhhhhhhh-h-hhHHHHHHHhcCcccHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999988764 3 6889987765432224678999999999999999999985
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A Back     alignment and structure
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A* Back     alignment and structure
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis} Back     alignment and structure
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0 Back     alignment and structure
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A* Back     alignment and structure
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei} Back     alignment and structure
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ... Back     alignment and structure
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus} Back     alignment and structure
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A* Back     alignment and structure
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A* Back     alignment and structure
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis} Back     alignment and structure
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii} Back     alignment and structure
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae} Back     alignment and structure
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3 Back     alignment and structure
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale} Back     alignment and structure
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A* Back     alignment and structure
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A* Back     alignment and structure
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A* Back     alignment and structure
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B* Back     alignment and structure
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A* Back     alignment and structure
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3 Back     alignment and structure
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3 Back     alignment and structure
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A* Back     alignment and structure
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A* Back     alignment and structure
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii} Back     alignment and structure
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A* Back     alignment and structure
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis} Back     alignment and structure
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0 Back     alignment and structure
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A* Back     alignment and structure
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3 Back     alignment and structure
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp} Back     alignment and structure
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii} Back     alignment and structure
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A* Back     alignment and structure
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3} Back     alignment and structure
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A* Back     alignment and structure
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A* Back     alignment and structure
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A* Back     alignment and structure
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A* Back     alignment and structure
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0 Back     alignment and structure
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1 Back     alignment and structure
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Back     alignment and structure
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4 Back     alignment and structure
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans} Back     alignment and structure
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A* Back     alignment and structure
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3 Back     alignment and structure
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0 Back     alignment and structure
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Back     alignment and structure
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans} Back     alignment and structure
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana} Back     alignment and structure
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii} Back     alignment and structure
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Back     alignment and structure
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus} Back     alignment and structure
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Back     alignment and structure
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1 Back     alignment and structure
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Back     alignment and structure
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1 Back     alignment and structure
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A Back     alignment and structure
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A* Back     alignment and structure
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Back     alignment and structure
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Back     alignment and structure
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A* Back     alignment and structure
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides} Back     alignment and structure
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa} Back     alignment and structure
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale} Back     alignment and structure
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Back     alignment and structure
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A* Back     alignment and structure
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3 Back     alignment and structure
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei} Back     alignment and structure
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Back     alignment and structure
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A* Back     alignment and structure
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A* Back     alignment and structure
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} Back     alignment and structure
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491} Back     alignment and structure
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A* Back     alignment and structure
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum} Back     alignment and structure
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4} Back     alignment and structure
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens} Back     alignment and structure
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus} Back     alignment and structure
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae} Back     alignment and structure
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis} Back     alignment and structure
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A* Back     alignment and structure
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Back     alignment and structure
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3 Back     alignment and structure
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A* Back     alignment and structure
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A* Back     alignment and structure
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A* Back     alignment and structure
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0 Back     alignment and structure
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A* Back     alignment and structure
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987} Back     alignment and structure
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Back     alignment and structure
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A* Back     alignment and structure
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Back     alignment and structure
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A* Back     alignment and structure
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum} Back     alignment and structure
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii} Back     alignment and structure
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B* Back     alignment and structure
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A* Back     alignment and structure
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A* Back     alignment and structure
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A* Back     alignment and structure
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A* Back     alignment and structure
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0 Back     alignment and structure
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A* Back     alignment and structure
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A* Back     alignment and structure
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1 Back     alignment and structure
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A* Back     alignment and structure
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A* Back     alignment and structure
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4} Back     alignment and structure
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A* Back     alignment and structure
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A* Back     alignment and structure
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A* Back     alignment and structure
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula} Back     alignment and structure
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A* Back     alignment and structure
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Back     alignment and structure
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1 Back     alignment and structure
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A* Back     alignment and structure
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0 Back     alignment and structure
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A* Back     alignment and structure
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Back     alignment and structure
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum} Back     alignment and structure
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A* Back     alignment and structure
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1 Back     alignment and structure
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae} Back     alignment and structure
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium} Back     alignment and structure
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A* Back     alignment and structure
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A* Back     alignment and structure
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Back     alignment and structure
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Back     alignment and structure
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli} Back     alignment and structure
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Back     alignment and structure
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9 Back     alignment and structure
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens} Back     alignment and structure
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Back     alignment and structure
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A* Back     alignment and structure
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A* Back     alignment and structure
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Back     alignment and structure
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6 Back     alignment and structure
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Back     alignment and structure
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Back     alignment and structure
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A* Back     alignment and structure
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes} Back     alignment and structure
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A* Back     alignment and structure
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus} Back     alignment and structure
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A* Back     alignment and structure
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Back     alignment and structure
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A* Back     alignment and structure
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A* Back     alignment and structure
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A* Back     alignment and structure
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus} Back     alignment and structure
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A* Back     alignment and structure
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens} Back     alignment and structure
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A* Back     alignment and structure
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A* Back     alignment and structure
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum} Back     alignment and structure
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A* Back     alignment and structure
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0 Back     alignment and structure
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A* Back     alignment and structure
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus} Back     alignment and structure
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A* Back     alignment and structure
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2 Back     alignment and structure
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A* Back     alignment and structure
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A* Back     alignment and structure
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3 Back     alignment and structure
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0 Back     alignment and structure
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1 Back     alignment and structure
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A* Back     alignment and structure
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A* Back     alignment and structure
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei} Back     alignment and structure
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A* Back     alignment and structure
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A* Back     alignment and structure
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia} Back     alignment and structure
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ... Back     alignment and structure
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579} Back     alignment and structure
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A* Back     alignment and structure
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A* Back     alignment and structure
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A* Back     alignment and structure
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A* Back     alignment and structure
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus} Back     alignment and structure
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A* Back     alignment and structure
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A Back     alignment and structure
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A Back     alignment and structure
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii} Back     alignment and structure
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A* Back     alignment and structure
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3 Back     alignment and structure
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A* Back     alignment and structure
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans} Back     alignment and structure
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis} Back     alignment and structure
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B Back     alignment and structure
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A* Back     alignment and structure
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A* Back     alignment and structure
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A* Back     alignment and structure
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A* Back     alignment and structure
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes} Back     alignment and structure
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3 Back     alignment and structure
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major} Back     alignment and structure
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida} Back     alignment and structure
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A* Back     alignment and structure
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp} Back     alignment and structure
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A* Back     alignment and structure
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A* Back     alignment and structure
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3 Back     alignment and structure
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis} Back     alignment and structure
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A* Back     alignment and structure
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A* Back     alignment and structure
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A* Back     alignment and structure
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A* Back     alignment and structure
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3 Back     alignment and structure
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2} Back     alignment and structure
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi} Back     alignment and structure
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A* Back     alignment and structure
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0 Back     alignment and structure
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A* Back     alignment and structure
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A* Back     alignment and structure
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A* Back     alignment and structure
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens} Back     alignment and structure
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A* Back     alignment and structure
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A Back     alignment and structure
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A* Back     alignment and structure
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A* Back     alignment and structure
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus} Back     alignment and structure
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A Back     alignment and structure
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri} Back     alignment and structure
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus} Back     alignment and structure
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis} Back     alignment and structure
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A* Back     alignment and structure
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A* Back     alignment and structure
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A* Back     alignment and structure
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A* Back     alignment and structure
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A Back     alignment and structure
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 519
d1rv3a_470 c.67.1.4 (A:) Serine hydroxymethyltransferase {Rab 0.0
d2a7va1463 c.67.1.4 (A:26-488) Serine hydroxymethyltransferas 1e-180
d1dfoa_416 c.67.1.4 (A:) Serine hydroxymethyltransferase {Esc 1e-154
d1kl1a_405 c.67.1.4 (A:) Serine hydroxymethyltransferase {Bac 1e-152
d2v1pa1467 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptop 2e-47
d1ax4a_465 c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanas 6e-36
d1c4ka2462 c.67.1.5 (A:108-569) Ornithine decarboxylase major 2e-32
d1c7ga_456 c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbi 8e-28
d1m6sa_343 c.67.1.1 (A:) Low-specificity threonine aldolase { 8e-09
d2z67a1434 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase ( 2e-06
d2e7ja1364 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase ( 3e-04
>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 470 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  529 bits (1363), Expect = 0.0
 Identities = 273/463 (58%), Positives = 346/463 (74%), Gaps = 2/463 (0%)

Query: 51  NQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 110
             L  PL++ D E+ DII+ E  RQ  GLELI SENF S +V++A+GS + NKYS GYPG
Sbjct: 6   QMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPG 65

Query: 111 ARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIM 170
            RYYGG E+ID  E+LCQKRAL A+ LDP  WGVNVQ  SGSPANF VYTAL++PH RIM
Sbjct: 66  QRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIM 125

Query: 171 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230
            LDLP GGHL+HG+ TD KKISA SIFFE+M Y+++  TGYIDY++LE++A LF PKLI+
Sbjct: 126 GLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLII 185

Query: 231 AGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 290
           AG S Y+R  DY R+RK+ D+  A ++ADMAHISGLV AGV+PSPFE+  VVTTTTHK+L
Sbjct: 186 AGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTL 245

Query: 291 RGPRGAMIFFRKGVKEIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV 349
           RG R  MIF+R+GV+ ++ K G+E++Y  E  IN AVFPGLQGGPHNH I+G+AVALKQ 
Sbjct: 246 RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQA 305

Query: 350 KTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLES 409
            TPE+K YQ QV++N    + +L+E GY +V+GG++NHL+LV+LR+KG DG R EKVLE+
Sbjct: 306 MTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEA 365

Query: 410 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDT 469
             IA NKNT PGD SA+ P G+R+GTPALTSRG +E+DF+KVA F    ++L ++I+ DT
Sbjct: 366 CSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDT 425

Query: 470 -KGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFE 511
                LK+F   L  DE  Q  +  LR +VE +A  FP  G  
Sbjct: 426 GPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPGLP 468
>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]} Length = 416 Back     information, alignment and structure
>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Length = 405 Back     information, alignment and structure
>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]} Length = 467 Back     information, alignment and structure
>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]} Length = 465 Back     information, alignment and structure
>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]} Length = 462 Back     information, alignment and structure
>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]} Length = 456 Back     information, alignment and structure
>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]} Length = 343 Back     information, alignment and structure
>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]} Length = 434 Back     information, alignment and structure
>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]} Length = 364 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query519
d1rv3a_470 Serine hydroxymethyltransferase {Rabbit (Oryctolag 100.0
d2a7va1463 Serine hydroxymethyltransferase {Human (Homo sapie 100.0
d1dfoa_416 Serine hydroxymethyltransferase {Escherichia coli 100.0
d1kl1a_405 Serine hydroxymethyltransferase {Bacillus stearoth 100.0
d1jf9a_405 NifS-like protein/selenocysteine lyase {Escherichi 99.97
d1t3ia_408 Probable cysteine desulfurase SufS {Synechocystis 99.97
d1b5pa_382 Aspartate aminotransferase, AAT {Thermus thermophi 99.97
d1p3wa_391 Cysteine desulfurase IscS {Escherichia coli [TaxId 99.97
d1j32a_388 Aspartate aminotransferase, AAT {Phormidium lapide 99.97
d1gdea_388 Aromatic aminoacid aminotransferase, AroAT {Archae 99.96
d1elua_381 Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 99.96
d1eg5a_376 NifS-like protein/selenocysteine lyase {Thermotoga 99.96
d1h0ca_388 Alanine-glyoxylate aminotransferase {Human (Homo s 99.96
d1d2fa_361 Modulator in mal gene expression, MalY {Escherichi 99.96
d1v2da_368 Glutamine aminotransferase {Thermus thermophilus [ 99.95
d1c7na_394 Cystalysin {Treponema denticola [TaxId: 158]} 99.95
d1xi9a_395 Putative alanine aminotransferase {Pyrococcus furi 99.95
d2e7ja1364 Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl 99.95
d1m32a_361 2-aminoethylphosphonate transaminase {Salmonella t 99.94
d2r5ea1418 Kynurenine--oxoglutarate transaminase I {Yellowfev 99.94
d2bkwa1382 Alanine-glyoxylate aminotransferase {Baker's yeast 99.94
d1vjoa_377 Alanine-glyoxylate aminotransferase {Cyanobacteria 99.94
d1o4sa_375 Aspartate aminotransferase, AAT {Thermotoga mariti 99.94
d1u08a_382 Putative methionine aminotransferase YdbL {Escheri 99.93
d2ch1a1388 3-hydroxykynurenine transaminase {Malaria mosquito 99.93
d2bwna1396 5-aminolevulinate synthase {Rhodobacter capsulatus 99.93
d1mdoa_376 Aminotransferase ArnB {Salmonella typhimurium [Tax 99.93
d1iuga_348 Subgroup IV putative aspartate aminotransferase {T 99.93
d1w7la_418 Kynurenine--oxoglutarate transaminase I {Human (Ho 99.93
d1fc4a_401 2-amino-3-ketobutyrate CoA ligase {Escherichia col 99.92
d1wsta1403 Multiple substrate aminotransferase, MSAT {Thermoc 99.92
d1bw0a_412 Tyrosine aminotransferase (TAT) {Trypanosoma cruzi 99.92
d1qz9a_404 Kynureninase {Pseudomonas fluorescens [TaxId: 294] 99.92
d1bs0a_383 PLP-dependent acyl-CoA synthase (8-amino-7-oxonano 99.92
d2gb3a1389 AAT homologue TM1698 {Thermotoga maritima [TaxId: 99.92
d1vp4a_420 Putative aminotransferase TM1131 {Thermotoga marit 99.91
d1iaya_428 1-aminocyclopropane-1-carboxylate synthase (ACC sy 99.91
d1c4ka2462 Ornithine decarboxylase major domain {Lactobacillu 99.91
d1lc5a_355 L-threonine-O-3-phosphate decarboxylase CobD {Salm 99.91
d1m7ya_431 1-aminocyclopropane-1-carboxylate synthase (ACC sy 99.9
d1fg7a_354 Histidinol-phosphate aminotransferase HisC {Escher 99.9
d1pmma_450 Glutamate decarboxylase beta, GadB {Escherichia co 99.9
d1c7ga_456 Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5 99.9
d1b9ha_384 3-amino-5-hydroxybenzoic acid synthase (AHBA synth 99.89
d2v1pa1467 Tryptophan indol-lyase (tryptophanase) {Escherichi 99.88
d7aata_401 Aspartate aminotransferase, AAT {Chicken (Gallus g 99.88
d1m6sa_343 Low-specificity threonine aldolase {Thermotoga mar 99.88
d2aeua1366 Hypothetical protein MJ0158 {Archaeon Methanococcu 99.88
d3bc8a1445 Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu 99.87
d2z67a1434 Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco 99.86
d1ax4a_465 Tryptophan indol-lyase (tryptophanase) {Proteus vu 99.86
d2fnua1371 Spore coat polysaccharide biosynthesis protein C { 99.86
d2f8ja1334 Histidinol-phosphate aminotransferase HisC {Thermo 99.86
d1ajsa_412 Aspartate aminotransferase, AAT {Pig (Sus scrofa), 99.85
d1o69a_374 Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam 99.84
d1yaaa_412 Aspartate aminotransferase, AAT {Baker's yeast (Sa 99.84
d1v72a1345 Phenylserine aldolase PSALD {Pseudomonas putida [T 99.84
d2q7wa1396 Aspartate aminotransferase, AAT {Escherichia coli 99.84
d1js3a_476 DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823] 99.82
d2ay1a_394 Aromatic aminoacid aminotransferase, AroAT {Paraco 99.82
d3tata_397 Aromatic aminoacid aminotransferase, AroAT {Escher 99.81
d2c0ra1361 Phosphoserine aminotransferase, PSAT {Bacillus cir 99.81
d1svva_340 Low-specificity threonine aldolase {Leishmania maj 99.8
d1bjna_360 Phosphoserine aminotransferase, PSAT {Escherichia 99.8
d1w23a_360 Phosphoserine aminotransferase, PSAT {Bacillus alc 99.76
d1y4ia1397 Methionine gamma-lyase, MGL {Citrobacter freundii 99.74
d1gc0a_392 Methionine gamma-lyase, MGL {Pseudomonas putida [T 99.72
d2hoxa1425 Alliinase {Garlic (Allium sativum) [TaxId: 4682]} 99.71
d1cs1a_384 Cystathionine gamma-synthase, CGS {Escherichia col 99.69
d1ibja_380 Cystathionine beta-lyase, CBL {Thale cress (Arabid 99.68
d1cl1a_391 Cystathionine beta-lyase, CBL {Escherichia coli [T 99.66
d1qgna_398 Cystathionine gamma-synthase, CGS {Common tobacco 99.65
d1e5ea_394 Methionine gamma-lyase, MGL {Trichomonas vaginalis 99.62
d1pffa_331 Methionine gamma-lyase, MGL {Trichomonas vaginalis 99.62
d1wyua1437 Glycine dehydrogenase (decarboxylating) subunit 1 99.59
d2ctza1421 O-acetyl-L-homoserine sulfhydrylase {Thermus therm 99.56
d1n8pa_393 Cystathionine gamma-lyase (CYS3) {Baker's yeast (S 99.54
d2byla1404 Ornithine aminotransferase {Human (Homo sapiens) [ 99.54
d1z7da1404 Ornithine aminotransferase {Plasmodium yoelii yoel 99.53
d1wyub1471 Glycine dehydrogenase subunit 2 (P-protein) {Therm 99.44
d1vefa1387 Acetylornithine/acetyl-lysine aminotransferase Arg 99.43
d1sffa_425 4-aminobutyrate aminotransferase, GABA-aminotransf 99.41
d1s0aa_429 Adenosylmethionine-8-amino-7-oxononanoate aminotra 99.39
d2gsaa_427 Glutamate-1-semialdehyde aminomutase (aminotransfe 99.38
d1zoda1431 Dialkylglycine decarboxylase {Pseudomonas cepacia 99.27
d1ohwa_461 4-aminobutyrate aminotransferase, GABA-aminotransf 99.18
>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2.5e-94  Score=728.77  Aligned_cols=464  Identities=59%  Similarity=0.987  Sum_probs=434.7

Q ss_pred             hhhhhhhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHH
Q 010058           49 WINQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ  128 (519)
Q Consensus        49 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~  128 (519)
                      .+++++..|++.||+++++|++|.+||+++|+||||||++|+.|++++++.|+|+|+|||||.|||+||+++|++|.+|+
T Consensus         4 ~~~~~~~~l~~~D~ei~~~i~~e~~rq~~~l~LIaSEN~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~   83 (470)
T d1rv3a_           4 HEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQ   83 (470)
T ss_dssp             HHHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHH
T ss_pred             hHHHHhhhHhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHH
Confidence            45678889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC
Q 010058          129 KRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES  208 (519)
Q Consensus       129 ~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~  208 (519)
                      ++++++||++++.|++||++.||+.||++++.+|++|||+|+.+++++|||++|++......+++.|..++.++|+++++
T Consensus        84 ~ra~~lF~~~~~~~~anVqp~SGs~An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~~  163 (470)
T d1rv3a_          84 KRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPD  163 (470)
T ss_dssp             HHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTT
T ss_pred             HHHHHHhCCChhhccccccccCCccHHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEecc
Confidence            99999999998889999999999999999999999999999999999999999998887778888899999999999999


Q ss_pred             CCCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCC
Q 010058          209 TGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHK  288 (519)
Q Consensus       209 ~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K  288 (519)
                      ++.||+|++++.+.++|||+|+++.|+|++.+|++++++||++.|++|++|++|.+|+++.++.++|++++|++|+||||
T Consensus       164 ~~~IDyd~l~~~a~~~kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl~~aDvvt~tTHK  243 (470)
T d1rv3a_         164 TGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHK  243 (470)
T ss_dssp             TCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSG
T ss_pred             cCcccHHHHHHHHHhhCcceEeechhhccccCCHHHHHHHHhccCCeEEecchhhhhhccccccCChhheeeeeeeehhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCcceEEeeccccccc-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHH
Q 010058          289 SLRGPRGAMIFFRKGVKEIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSK  367 (519)
Q Consensus       289 ~l~GprgG~i~~~~~~~~~~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~  367 (519)
                      +|+|||||+|+++++.+... ..|....+++.+++++++||+.||+|+++.++|++++++++..++|++|.+|+.+|++.
T Consensus       244 tlrGPrgGiI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~ea~~~~fk~Ya~qvv~NAk~  323 (470)
T d1rv3a_         244 TLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRA  323 (470)
T ss_dssp             GGCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred             hccCCcceEEEEccccccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence            99999999999998754333 55555666899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHH
Q 010058          368 FARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEED  447 (519)
Q Consensus       368 l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~d  447 (519)
                      |++.|.+.|+++++++|++|++++++++.++++.++++.|+++||.+|+|++|+|.++..+++||||++++|+|||+++|
T Consensus       324 La~~L~~~G~~v~~ggTdnHlvlvdl~~~g~~g~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~alTtrG~~e~d  403 (470)
T d1rv3a_         324 LSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKD  403 (470)
T ss_dssp             HHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHH
T ss_pred             HHHHHHhCCceeccCCCCCceEEEeecccCCcHHHHHHHHHHcCcEECCCcCCCCCCCCCCCeeEecCHHHHhCCCCHHH
Confidence            99999999999999999999999999988999999999999999999999999999888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCC-CCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCCCCc
Q 010058          448 FEKVAEFFDAAVKLALKIKGDTK-GTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFEK  512 (519)
Q Consensus       448 i~~l~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~~  512 (519)
                      |++++++|.+++..+++++.+.. ...++||.+.+..+.+....+.++|++|.+||++||+|||++
T Consensus       404 m~~iA~~I~~~l~~~~~~~~~~g~~~~~~ef~~~~~~~~~~~~~i~~lr~eV~~l~~~FPlPg~~~  469 (470)
T d1rv3a_         404 FQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPGLPG  469 (470)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTTSCCCSSSC
T ss_pred             HHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHhhcccccHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence            99999999999999999987762 235789998887643324678999999999999999999975
>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]} Back     information, alignment and structure
>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} Back     information, alignment and structure
>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} Back     information, alignment and structure
>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]} Back     information, alignment and structure
>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]} Back     information, alignment and structure
>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]} Back     information, alignment and structure
>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} Back     information, alignment and structure
>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]} Back     information, alignment and structure
>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]} Back     information, alignment and structure
>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]} Back     information, alignment and structure
>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]} Back     information, alignment and structure
>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]} Back     information, alignment and structure
>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Back     information, alignment and structure
>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]} Back     information, alignment and structure
>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]} Back     information, alignment and structure
>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Back     information, alignment and structure
>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Back     information, alignment and structure
>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]} Back     information, alignment and structure
>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]} Back     information, alignment and structure
>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]} Back     information, alignment and structure
>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]} Back     information, alignment and structure
>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]} Back     information, alignment and structure
>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]} Back     information, alignment and structure
>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]} Back     information, alignment and structure
>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure