Citrus Sinensis ID: 010082
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 518 | 2.2.26 [Sep-21-2011] | |||||||
| Q6R3K6 | 676 | Probable metal-nicotianam | yes | no | 0.994 | 0.761 | 0.819 | 0.0 | |
| Q6R3K8 | 670 | Probable metal-nicotianam | no | no | 0.959 | 0.741 | 0.803 | 0.0 | |
| Q7XRV2 | 678 | Probable metal-nicotianam | yes | no | 1.0 | 0.764 | 0.770 | 0.0 | |
| Q7XRV1 | 668 | Probable metal-nicotianam | no | no | 1.0 | 0.775 | 0.664 | 0.0 | |
| Q5JQD7 | 717 | Probable metal-nicotianam | no | no | 0.951 | 0.687 | 0.607 | 1e-180 | |
| Q7XKF4 | 724 | Probable metal-nicotianam | no | no | 0.949 | 0.679 | 0.590 | 1e-175 | |
| Q9SHY2 | 688 | Probable metal-nicotianam | no | no | 0.982 | 0.739 | 0.582 | 1e-174 | |
| Q6H7J6 | 727 | Probable metal-nicotianam | no | no | 0.986 | 0.702 | 0.574 | 1e-173 | |
| Q7X660 | 712 | Probable metal-nicotianam | no | no | 0.951 | 0.692 | 0.568 | 1e-172 | |
| Q0J932 | 686 | Probable metal-nicotianam | no | no | 0.982 | 0.741 | 0.547 | 1e-167 |
| >sp|Q6R3K6|YSL6_ARATH Probable metal-nicotianamine transporter YSL6 OS=Arabidopsis thaliana GN=YSL6 PE=2 SV=2 | Back alignment and function desciption |
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Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/516 (81%), Positives = 471/516 (91%), Gaps = 1/516 (0%)
Query: 1 MIGLFILLGINFSFFSSVLYQVMILDYKLTYPSGTATAMLINSFHTNTGAELAGKQVRCL 60
MIG ++ F L +VM+LDYKLTYPSGTATAMLINSFHTNTGAELAG QV+CL
Sbjct: 158 MIGFLFVVSFLGLFSLVPLRKVMVLDYKLTYPSGTATAMLINSFHTNTGAELAGNQVKCL 217
Query: 61 GKYLSISFFWSCFKWFFSGVGNSCGFDNFPSFGLTLFKNTFYFDFSPTYVGCGLICPHIV 120
GKYLS+S WSCFKWFFSG+G++CGFDNFP+ GLTLFKNTFYFDFSPTY+GCGLICPHIV
Sbjct: 218 GKYLSLSLIWSCFKWFFSGIGDACGFDNFPTLGLTLFKNTFYFDFSPTYIGCGLICPHIV 277
Query: 121 NCSVLLGAIISWGFLWPFISQHAGDWYPADLGSNDFKGLYGYKVFIAISLILGDGLYNLI 180
NCSVLLGAIISWG LWPF+SQHAGDWYPADLGSNDFKGLYGYKVFIAI++ILGDGLYNL+
Sbjct: 278 NCSVLLGAIISWGILWPFVSQHAGDWYPADLGSNDFKGLYGYKVFIAIAIILGDGLYNLV 337
Query: 181 KIITITVKEMWNRSTKDSKLPFVND-IQDTETSKLLLEQKEREIVFLKDGIPTWFAASGY 239
KII +TVKE+ + ++ LP V D + D+E S++LL +K+R+ VFLKD IP FA +GY
Sbjct: 338 KIIAVTVKELCSSRSRRLNLPIVTDGVDDSEASEILLVKKKRDEVFLKDRIPLEFAIAGY 397
Query: 240 VGLAAISTATIPTIFPPLKWYLVLCSYLIAPALAFCNSYGTGLTDWNLASTYGKIGLFII 299
VGLAAISTATIP IFPPLKWY VLCSY IAPALAFCNSYGTGLTDW+LASTYGKIGLFII
Sbjct: 398 VGLAAISTATIPIIFPPLKWYFVLCSYFIAPALAFCNSYGTGLTDWSLASTYGKIGLFII 457
Query: 300 ASLVGTDGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAMGCV 359
AS+VG+DGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQL+GTAMGCV
Sbjct: 458 ASVVGSDGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGCV 517
Query: 360 IAPLTFWMYWTAFDIGSPDGPYKAPYAVIFREMAILGIEGFSELPKHCLALCCGFFVAAL 419
IAPLTFW++WTAFDIG P+GPYKAPYAVIFREMAILGIEGF+ELPKHCLALC GFF+AAL
Sbjct: 518 IAPLTFWLFWTAFDIGDPNGPYKAPYAVIFREMAILGIEGFAELPKHCLALCYGFFIAAL 577
Query: 420 VINLLRDATPTKISRFIPVPMAMAVPFYIGAYFAIDMFVGTVILFIWELVNRKDSEDYAG 479
++NLLRD TP KIS+FIP+PMAMAVPFYIGAYFAIDMFVGTVILF+WE +NRKD+ED+AG
Sbjct: 578 IVNLLRDITPPKISQFIPIPMAMAVPFYIGAYFAIDMFVGTVILFVWERINRKDAEDFAG 637
Query: 480 AVASGLICGDGIWTIPSAILSIFRVNPPVCMYFGPA 515
AVASGLICGDGIWTIPSAILSI R+NPP+CMYFGP+
Sbjct: 638 AVASGLICGDGIWTIPSAILSILRINPPICMYFGPS 673
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May be involved in the transport of nicotianamine-chelated metals. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q6R3K8|YSL4_ARATH Probable metal-nicotianamine transporter YSL4 OS=Arabidopsis thaliana GN=YSL4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7XRV2|YSL6_ORYSJ Probable metal-nicotianamine transporter YSL6 OS=Oryza sativa subsp. japonica GN=YSL6 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7XRV1|YSL5_ORYSJ Probable metal-nicotianamine transporter YSL5 OS=Oryza sativa subsp. japonica GN=YSL5 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q5JQD7|YSL12_ORYSJ Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica GN=YSL12 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q7XKF4|YSL13_ORYSJ Probable metal-nicotianamine transporter YSL13 OS=Oryza sativa subsp. japonica GN=YSL13 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9SHY2|YSL7_ARATH Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana GN=YSL7 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6H7J6|YSL14_ORYSJ Probable metal-nicotianamine transporter YSL14 OS=Oryza sativa subsp. japonica GN=YSL14 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7X660|YSL11_ORYSJ Probable metal-nicotianamine transporter YSL11 OS=Oryza sativa subsp. japonica GN=YSL11 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q0J932|YSL10_ORYSJ Probable metal-nicotianamine transporter YSL10 OS=Oryza sativa subsp. japonica GN=YSL10 PE=2 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 518 | ||||||
| 224055759 | 669 | oligopeptide transporter OPT family [Pop | 0.994 | 0.769 | 0.850 | 0.0 | |
| 350285879 | 679 | yellow stripe-like protein 6 [Malus xiao | 0.961 | 0.733 | 0.851 | 0.0 | |
| 356561689 | 674 | PREDICTED: probable metal-nicotianamine | 0.961 | 0.738 | 0.844 | 0.0 | |
| 359488466 | 675 | PREDICTED: probable metal-nicotianamine | 0.961 | 0.737 | 0.863 | 0.0 | |
| 449460551 | 676 | PREDICTED: probable metal-nicotianamine | 0.996 | 0.763 | 0.821 | 0.0 | |
| 298571730 | 678 | yellow stripe-like protein 6.4 [Brassica | 0.965 | 0.737 | 0.844 | 0.0 | |
| 297818256 | 676 | hypothetical protein ARALYDRAFT_904909 [ | 0.994 | 0.761 | 0.817 | 0.0 | |
| 357503715 | 679 | Yellow stripe-like protein 1.1 [Medicago | 0.965 | 0.736 | 0.828 | 0.0 | |
| 18405202 | 676 | putative metal-nicotianamine transporter | 0.994 | 0.761 | 0.819 | 0.0 | |
| 298571726 | 678 | yellow stripe-like protein 6.1 [Brassica | 1.0 | 0.764 | 0.816 | 0.0 |
| >gi|224055759|ref|XP_002298639.1| oligopeptide transporter OPT family [Populus trichocarpa] gi|222845897|gb|EEE83444.1| oligopeptide transporter OPT family [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/516 (85%), Positives = 480/516 (93%), Gaps = 1/516 (0%)
Query: 1 MIGLFILLGINFSFFSSVLYQVMILDYKLTYPSGTATAMLINSFHTNTGAELAGKQVRCL 60
MIG ++ F + L +VM++DYKLTYPSGTATAMLINSFHTNTGAELAGKQV CL
Sbjct: 153 MIGFLFVVSFLGLFSLAPLRKVMVMDYKLTYPSGTATAMLINSFHTNTGAELAGKQVSCL 212
Query: 61 GKYLSISFFWSCFKWFFSGVGNSCGFDNFPSFGLTLFKNTFYFDFSPTYVGCGLICPHIV 120
GKYLSIS WSCFKWFFSG+G+SCGFDNFPS GLTLFK+TF+FDFSPTYVGCGLICPHIV
Sbjct: 213 GKYLSISLVWSCFKWFFSGIGDSCGFDNFPSLGLTLFKSTFFFDFSPTYVGCGLICPHIV 272
Query: 121 NCSVLLGAIISWGFLWPFISQHAGDWYPADLGSNDFKGLYGYKVFIAISLILGDGLYNLI 180
NCSVLLGAIISWGFLWPFISQHAG WYPADL SNDFKGLYGYKVFIAI+LILGDGLYNLI
Sbjct: 273 NCSVLLGAIISWGFLWPFISQHAGAWYPADLSSNDFKGLYGYKVFIAIALILGDGLYNLI 332
Query: 181 KIITITVKEMWNRSTKDSKLPFVNDIQDTETSKLLLEQKEREIVFLKDGIPTWFAASGYV 240
KII IT+KEM N+ST + LP V+++QD+ETSKLLLEQ++R+ VFLKD IPTW A+GYV
Sbjct: 333 KIIIITIKEMCNKSTMQN-LPIVSEVQDSETSKLLLEQRKRDEVFLKDRIPTWLVAAGYV 391
Query: 241 GLAAISTATIPTIFPPLKWYLVLCSYLIAPALAFCNSYGTGLTDWNLASTYGKIGLFIIA 300
GLAAISTA IP IFPPLKWYLVLCSY+IAPALAFCNSYGTGLTDWNL STYGKIGLFIIA
Sbjct: 392 GLAAISTAVIPVIFPPLKWYLVLCSYIIAPALAFCNSYGTGLTDWNLTSTYGKIGLFIIA 451
Query: 301 SLVGTDGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAMGCVI 360
SLVG+DGGV+AGLAA GVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQL+GTAMGCVI
Sbjct: 452 SLVGSDGGVVAGLAASGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGCVI 511
Query: 361 APLTFWMYWTAFDIGSPDGPYKAPYAVIFREMAILGIEGFSELPKHCLALCCGFFVAALV 420
APLTFW++W+AFDIG PDGPYKAPYAVIFREMAILGIEGFSELP+HCLALCCGFFVAALV
Sbjct: 512 APLTFWLFWSAFDIGDPDGPYKAPYAVIFREMAILGIEGFSELPEHCLALCCGFFVAALV 571
Query: 421 INLLRDATPTKISRFIPVPMAMAVPFYIGAYFAIDMFVGTVILFIWELVNRKDSEDYAGA 480
INLLRD TP KIS+FIP+PMAMAVPFYIGAYFAIDMFVGTVILF+WE +NRKD+EDY+GA
Sbjct: 572 INLLRDVTPKKISQFIPIPMAMAVPFYIGAYFAIDMFVGTVILFVWERINRKDAEDYSGA 631
Query: 481 VASGLICGDGIWTIPSAILSIFRVNPPVCMYFGPAV 516
VASGLICGDGIWTIPSAIL+IFR+NPP+CMYFGP++
Sbjct: 632 VASGLICGDGIWTIPSAILAIFRINPPICMYFGPSL 667
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350285879|gb|AEQ28191.1| yellow stripe-like protein 6 [Malus xiaojinensis] | Back alignment and taxonomy information |
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| >gi|356561689|ref|XP_003549112.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|359488466|ref|XP_002274559.2| PREDICTED: probable metal-nicotianamine transporter YSL6-like isoform 1 [Vitis vinifera] gi|296082320|emb|CBI21325.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449460551|ref|XP_004148009.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like [Cucumis sativus] gi|449501993|ref|XP_004161514.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|298571730|gb|ACL83357.2| yellow stripe-like protein 6.4 [Brassica juncea] | Back alignment and taxonomy information |
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| >gi|297818256|ref|XP_002877011.1| hypothetical protein ARALYDRAFT_904909 [Arabidopsis lyrata subsp. lyrata] gi|297322849|gb|EFH53270.1| hypothetical protein ARALYDRAFT_904909 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|357503715|ref|XP_003622146.1| Yellow stripe-like protein 1.1 [Medicago truncatula] gi|355497161|gb|AES78364.1| Yellow stripe-like protein 1.1 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|18405202|ref|NP_566806.1| putative metal-nicotianamine transporter YSL6 [Arabidopsis thaliana] gi|160359042|sp|Q6R3K6.2|YSL6_ARATH RecName: Full=Probable metal-nicotianamine transporter YSL6; AltName: Full=Protein YELLOW STRIPE LIKE 6; Short=AtYSL6 gi|9279625|dbj|BAB01083.1| unnamed protein product [Arabidopsis thaliana] gi|332643734|gb|AEE77255.1| putative metal-nicotianamine transporter YSL6 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|298571726|gb|ACE77055.2| yellow stripe-like protein 6.1 [Brassica juncea] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 518 | ||||||
| TAIR|locus:2091970 | 676 | YSL6 "AT3G27020" [Arabidopsis | 0.992 | 0.760 | 0.800 | 1.4e-231 | |
| TAIR|locus:2163036 | 670 | YSL4 "AT5G41000" [Arabidopsis | 0.990 | 0.765 | 0.763 | 4.7e-222 | |
| TAIR|locus:2018491 | 688 | YSL7 "AT1G65730" [Arabidopsis | 0.982 | 0.739 | 0.566 | 5.9e-160 | |
| TAIR|locus:2090502 | 714 | YSL5 "AT3G17650" [Arabidopsis | 0.982 | 0.712 | 0.541 | 7e-156 | |
| TAIR|locus:2134956 | 673 | YSL1 "YELLOW STRIPE like 1" [A | 0.965 | 0.742 | 0.532 | 3.3e-150 | |
| TAIR|locus:2007715 | 724 | YSL8 "AT1G48370" [Arabidopsis | 0.974 | 0.697 | 0.528 | 1.1e-149 | |
| TAIR|locus:2152896 | 664 | YSL2 "AT5G24380" [Arabidopsis | 0.955 | 0.745 | 0.525 | 3.9e-147 | |
| TAIR|locus:2168656 | 675 | YSL3 "YELLOW STRIPE like 3" [A | 0.947 | 0.727 | 0.531 | 6.4e-147 | |
| TAIR|locus:2163508 | 216 | AT5G45450 "AT5G45450" [Arabido | 0.382 | 0.916 | 0.556 | 1e-59 | |
| CGD|CAL0001509 | 718 | OPT8 [Candida albicans (taxid: | 0.525 | 0.378 | 0.269 | 1.3e-27 |
| TAIR|locus:2091970 YSL6 "AT3G27020" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2234 (791.5 bits), Expect = 1.4e-231, P = 1.4e-231
Identities = 414/517 (80%), Positives = 461/517 (89%)
Query: 1 MIGLFILLGINFSFFSSV-LYQVMILDYKLTYPSGTATAMLINSFHTNTGAELAGKQVRC 59
MIG ++ FS V L +VM+LDYKLTYPSGTATAMLINSFHTNTGAELAG QV+C
Sbjct: 158 MIGFLFVVSF-LGLFSLVPLRKVMVLDYKLTYPSGTATAMLINSFHTNTGAELAGNQVKC 216
Query: 60 LGKYLXXXXXXXXXXXXXXGVGNSCGFDNFPSFGLTLFKNTFYFDFSPTYVGCGLICPHI 119
LGKYL G+G++CGFDNFP+ GLTLFKNTFYFDFSPTY+GCGLICPHI
Sbjct: 217 LGKYLSLSLIWSCFKWFFSGIGDACGFDNFPTLGLTLFKNTFYFDFSPTYIGCGLICPHI 276
Query: 120 VNCSVLLGAIISWGFLWPFISQHAGDWYPADLGSNDFKGLYGYKVFIAISLILGDGLYNL 179
VNCSVLLGAIISWG LWPF+SQHAGDWYPADLGSNDFKGLYGYKVFIAI++ILGDGLYNL
Sbjct: 277 VNCSVLLGAIISWGILWPFVSQHAGDWYPADLGSNDFKGLYGYKVFIAIAIILGDGLYNL 336
Query: 180 IKIITITVKEMWNRSTKDSKLPFVND-IQDTETSKLLLEQKEREIVFLKDGIPTWFAASG 238
+KII +TVKE+ + ++ LP V D + D+E S++LL +K+R+ VFLKD IP FA +G
Sbjct: 337 VKIIAVTVKELCSSRSRRLNLPIVTDGVDDSEASEILLVKKKRDEVFLKDRIPLEFAIAG 396
Query: 239 YVGLAAISTATIPTIFPPLKWYLVLCSYLIAPALAFCNSYGTGLTDWNLASTYGKIGLFI 298
YVGLAAISTATIP IFPPLKWY VLCSY IAPALAFCNSYGTGLTDW+LASTYGKIGLFI
Sbjct: 397 YVGLAAISTATIPIIFPPLKWYFVLCSYFIAPALAFCNSYGTGLTDWSLASTYGKIGLFI 456
Query: 299 IASLVGTDGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAMGC 358
IAS+VG+DGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQL+GTAMGC
Sbjct: 457 IASVVGSDGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGC 516
Query: 359 VIAPLTFWMYWTAFDIGSPDGPYKAPYAVIFREMAILGIEGFSELPKHCLALCCGFFVAA 418
VIAPLTFW++WTAFDIG P+GPYKAPYAVIFREMAILGIEGF+ELPKHCLALC GFF+AA
Sbjct: 517 VIAPLTFWLFWTAFDIGDPNGPYKAPYAVIFREMAILGIEGFAELPKHCLALCYGFFIAA 576
Query: 419 LVINLLRDATPTKISRFIPVPMAMAVPFYIGAYFAIDMFVGTVILFIWELVNRKDSEDYA 478
L++NLLRD TP KIS+FIP+PMAMAVPFYIGAYFAIDMFVGTVILF+WE +NRKD+ED+A
Sbjct: 577 LIVNLLRDITPPKISQFIPIPMAMAVPFYIGAYFAIDMFVGTVILFVWERINRKDAEDFA 636
Query: 479 GAVASGLICGDGIWTIPSAILSIFRVNPPVCMYFGPA 515
GAVASGLICGDGIWTIPSAILSI R+NPP+CMYFGP+
Sbjct: 637 GAVASGLICGDGIWTIPSAILSILRINPPICMYFGPS 673
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| TAIR|locus:2163036 YSL4 "AT5G41000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2018491 YSL7 "AT1G65730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2090502 YSL5 "AT3G17650" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2134956 YSL1 "YELLOW STRIPE like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2007715 YSL8 "AT1G48370" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2152896 YSL2 "AT5G24380" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2168656 YSL3 "YELLOW STRIPE like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163508 AT5G45450 "AT5G45450" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| CGD|CAL0001509 OPT8 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6R3K6 | YSL6_ARATH | No assigned EC number | 0.8197 | 0.9942 | 0.7618 | yes | no |
| Q7XRV2 | YSL6_ORYSJ | No assigned EC number | 0.7702 | 1.0 | 0.7640 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_Genewise1_v1.C_LG_I3156 | oligopeptide transporter OPT family (670 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 518 | |||
| pfam03169 | 619 | pfam03169, OPT, OPT oligopeptide transporter prote | 9e-92 | |
| TIGR00728 | 606 | TIGR00728, OPT_sfam, oligopeptide transporter, OPT | 4e-65 | |
| COG1297 | 624 | COG1297, COG1297, Predicted membrane protein [Func | 6e-17 | |
| TIGR00733 | 591 | TIGR00733, TIGR00733, putative oligopeptide transp | 2e-05 |
| >gnl|CDD|217401 pfam03169, OPT, OPT oligopeptide transporter protein | Back alignment and domain information |
|---|
Score = 292 bits (749), Expect = 9e-92
Identities = 131/523 (25%), Positives = 215/523 (41%), Gaps = 40/523 (7%)
Query: 4 LFILLGINFS--FFSSVLYQVMILDYKLTYPSGTATAMLINSFHTNTGAELAGKQVRCLG 61
+ +LL F+ L + ++ KL +PSG ATA L+ + HT G + A +++
Sbjct: 109 ILLLLSTQLLGVGFAGPLRRFLVYPPKLPFPSGLATAELLKALHTPGGWKEAKSRLKFFL 168
Query: 62 KYLSISF--FWSCFKWFFSGVGNS---CGFDNFPSFGLTLFKNTFYFDFSPTYVGCGLIC 116
SF +W F F + S + P+FGL F FD+S +G GLI
Sbjct: 169 IGFVASFVYYWFPFYIFPALSSFSWVCWIAPSNPTFGLLFGGLGFTFDWSAILLGSGLIV 228
Query: 117 PHIVNCSVLLGAIISWGFLWPFISQHAGDWYPADLGSND---------FKGLYGYKVFIA 167
P V ++L+GA++SWG + P + WY A L GL Y +I
Sbjct: 229 PLWVAVNMLIGAVLSWGIIIPLLYYSGNVWYTAYLPIMSNGLFDNTGTSDGLLDYARYIG 288
Query: 168 ISLILGDGLYNLIKIITITVKEMWN--RSTKDSKLPFVNDIQDTETSKLLLEQKEREIVF 225
+L GLY L+ IT + + +D ++ + R ++
Sbjct: 289 YGPMLLSGLYALLFFAAITATIVHSILFHGRDIWQALKASRGPKKS----YDDPHRRLMR 344
Query: 226 LKDGIPTWFAASGYVGLAAISTATIPTIFP-PLKWYLVLCSYLIAPALAFCNSYGTGLTD 284
+P W+ +G V + A + +FP L + +L + L+A A ++Y GLT
Sbjct: 345 KYKEVPMWWYLAGLVLSLVLGIALVAALFPTQLPVWGLLLALLLAFVFAIPSAYIAGLTG 404
Query: 285 WNLASTYGKIGLFIIASLVGTDGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAK 344
+ S G + I ++ G +A L GV + + A D MQD KTG+ T + +
Sbjct: 405 SSPVSGLGILTELIAGYVLP--GRPLANLIFGGVGYNAAAQAGDFMQDLKTGHYTGAPPR 462
Query: 345 SMFVSQLLGTAMGCVIAPLTFWMYWTAFDIGSPDGP---YKAPYAVIFREMAILGIEGF- 400
+ FV+QL+GT +G V+ P + A+ G AP A +A I G
Sbjct: 463 AQFVAQLIGTLVGSVVNPGVLNLLNQAYGCTGAQGDSWTCPAPQAFFSAAVAWGVIGGKR 522
Query: 401 SELPKHCLALCCGFFVAALVINLLRDATPTKISRFIPVPMAMA----VPFYIGAYFAIDM 456
LP + L A V++ L + +P +A A + Y+ +
Sbjct: 523 FGLPYYALLWGFLVGAVAPVLDWLL-------HKRLPRSLAFAGAGTIGPYLPPSLTSAI 575
Query: 457 FVGTVILFIWELVNRKDSEDYAGAVASGLICGDGIWTIPSAIL 499
VG + + + Y +A+GLI G+ + + A L
Sbjct: 576 LVGGLFNYYVRRRRKAWWRKYNYVLAAGLIAGEALMGVIIAFL 618
|
The OPT family of oligopeptide transporters is distinct from the ABC pfam00005 and PTR pfam00854 transporter families. OPT transporters were first recognised in fungi (Candida albicans and Schizosaccharomyces pombe), but this alignment also includes orthologues from Arabidopsis thaliana. OPT transporters are thought to have 12-14 transmembrane domains and contain the following motif: SPYxEVRxxVxxxDDP. Length = 619 |
| >gnl|CDD|233105 TIGR00728, OPT_sfam, oligopeptide transporter, OPT superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|224216 COG1297, COG1297, Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|129816 TIGR00733, TIGR00733, putative oligopeptide transporter, OPT family | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 518 | |||
| KOG2262 | 761 | consensus Sexual differentiation process protein I | 100.0 | |
| TIGR00727 | 681 | ISP4_OPT small oligopeptide transporter, OPT famil | 100.0 | |
| PF03169 | 624 | OPT: OPT oligopeptide transporter protein; InterPr | 100.0 | |
| TIGR00728 | 654 | OPT_sfam oligopeptide transporters, OPT superfamil | 100.0 | |
| TIGR00733 | 591 | putative oligopeptide transporter, OPT family. Thi | 100.0 | |
| COG1297 | 624 | Predicted membrane protein [Function unknown] | 100.0 | |
| TIGR00733 | 591 | putative oligopeptide transporter, OPT family. Thi | 93.47 | |
| PF03169 | 624 | OPT: OPT oligopeptide transporter protein; InterPr | 85.22 |
| >KOG2262 consensus Sexual differentiation process protein ISP4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-97 Score=768.82 Aligned_cols=487 Identities=16% Similarity=0.202 Sum_probs=429.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccCCCCCCchHHHHHHHHhhccCCccccc-chhHHHHHHHHHHHHHHHHH-HHHhcCC
Q 010082 3 GLFILLGINFSFFSSVLYQVMILDYKLTYPSGTATAMLINSFHTNTGAELA-GKQVRCLGKYLSISFFWSCF-KWFFSGV 80 (518)
Q Consensus 3 ~~~~~~~~lG~~~Ag~lRr~lV~~~~l~~P~~la~a~l~~~lh~~~~~~~~-~~~~~~f~~~f~~~fv~~~~-~~i~p~l 80 (518)
-+.+++|++|||+||++||++|+|.+|.||++|++++|+|+||++|+++++ .+|+|||.++|+++|+|+|+ .+++|.|
T Consensus 185 ll~lttQ~lGyGwAGl~Rk~lV~Pa~m~WPsnLvqvsLFraLHeke~~~~g~msR~rFF~ivfv~SFiyY~fPgylF~~L 264 (761)
T KOG2262|consen 185 LLVLTTQLLGYGWAGLFRKYLVYPASMWWPSNLVQVSLFRALHEKENKSKGNMSRYRFFLIVFVASFIYYWFPGYLFPIL 264 (761)
T ss_pred HHHHHHHHhcccHhhhhHhhccCcHhhcCcchhHHHHHHHHHHhhhhhcccCccchhhhhHHHHHHHHHHHhhHHHHHHH
Confidence 467888999999999999999999999999999999999999997665544 58999999999999999998 5999987
Q ss_pred C---Ccccccc--c---cccccccc--cceeeecccc--ccccCcccccHHHHHHHHHHHHHHHHHHHHHHHhhcCcccC
Q 010082 81 G---NSCGFDN--F---PSFGLTLF--KNTFYFDFSP--TYVGCGLICPHIVNCSVLLGAIISWGFLWPFISQHAGDWYP 148 (518)
Q Consensus 81 ~---~~~~~~~--~---~~~G~~~~--~~~~~~d~s~--~~iG~g~i~p~~~~~~~~~G~vl~~~il~P~~~~~~~~w~~ 148 (518)
+ .+||... . .++|+..| ..++++||+. +|+|+|+.+|+++.+|.++|.++..+|+.|++|++ |.|+.
T Consensus 265 s~~swvcW~~P~s~~~~qi~sg~~GLGi~~~tlDW~~IssylgSPLasP~~a~~n~~~gfvl~~~IV~Pi~Y~~-n~~~a 343 (761)
T KOG2262|consen 265 SSFSWVCWIWPSSITANQIGSGLTGLGIGPFTLDWSQISSYLGSPLASPFFAIANVFLGFVLFIYIVLPILYWT-NTYDA 343 (761)
T ss_pred hhhheeeEeccccHHHHHhcccccccccccccccHHHHHHHcCCcchhhHHHHHHHhhhhhhhhhhhhhhHhhc-cceec
Confidence 5 4888842 1 25666544 4579999997 58999999999999999999999999999999997 89988
Q ss_pred CCCCCCC--c-------------------chhhhhH----hhHHHHHHHHHH--HHHHHHHHHH----HHHHHHHHhhhC
Q 010082 149 ADLGSND--F-------------------KGLYGYK----VFIAISLILGDG--LYNLIKIITI----TVKEMWNRSTKD 197 (518)
Q Consensus 149 ~~~~~~~--~-------------------~~~~~y~----~~~~~~~~~~~g--~~~~~~~~~~----~~~~i~~~~~~~ 197 (518)
+++|+.+ . -++.+|+ +|++..+.+++| +.++.+.+.| ..||+|++.|+.
T Consensus 344 ~~fPI~Ss~lf~~tG~sYnvt~Il~~~f~ld~~~Y~~ysp~yls~~falsygl~faa~~a~i~Hv~Lf~gkdiw~~~~~~ 423 (761)
T KOG2262|consen 344 KYFPIFSSSLFDHTGNSYNVTKILDSKFELDLDKYQEYSPLYLSTFFALSYGLGFAALSATIVHVALFNGKDIWQQTKKA 423 (761)
T ss_pred ceeceecCcceecCCcEeceeeeecCccccchHHHhhcCCcceeHHHHHHHHHHHHHHHHHhhhheeeccHHHHHHHHhc
Confidence 7777411 0 1233565 578888888877 4555555554 469999987765
Q ss_pred CCCCCccccccchhhhhhhhhhhhhhhcccCCCchHHHHHHHHHHHHHHHhhhccccC--CchHHHHHHHHHHHHHHHhh
Q 010082 198 SKLPFVNDIQDTETSKLLLEQKEREIVFLKDGIPTWFAASGYVGLAAISTATIPTIFP--PLKWYLVLCSYLIAPALAFC 275 (518)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~y~~vP~ww~~~~lvv~~~~~~~~~~~~~~--~~p~w~~ilai~l~~i~~~~ 275 (518)
. ++++|.|++.|+||||||+|||.+.+++++++++++++.+.. |+|||++++|+++++++++|
T Consensus 424 ~---------------~k~~DiHtrlMkkYKeVP~WWf~~ili~s~~l~~~~~~~~~~~~q~PwWg~~va~~ia~vf~iP 488 (761)
T KOG2262|consen 424 F---------------NKKMDIHTRLMKKYKEVPDWWFLAILIVSLGLGLAACEGYKTQVQLPWWGLLVACAIAFVFTIP 488 (761)
T ss_pred c---------------ccCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHhhheeeecccccCchHHHHHHHHHHHHHhcc
Confidence 3 246799999999999999999999999999999999988877 89999999999999999999
Q ss_pred hhhhhhccccccccchhHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCChHHHHHHHHHHHH
Q 010082 276 NSYGTGLTDWNLASTYGKIGLFIIASLVGTDGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTA 355 (518)
Q Consensus 276 ~~~~~g~tg~~p~~~l~~i~~li~g~~~g~pg~~~anl~~~~~~~~~~~qa~~~~~DlK~G~yl~~pPR~~f~~Q~iG~i 355 (518)
.|+++|+||++| |+|+++|+|+||+. ||+|+|||.||.||++++.||..++||+|+|||||+|||.||.+|++||+
T Consensus 489 igii~AtTNq~~--GLNiitE~i~Gy~~--PgrPiAn~~FK~yGyism~Qal~f~~DlKlghYMKIPPR~mF~~Q~v~ti 564 (761)
T KOG2262|consen 489 IGIIQATTNQTP--GLNIITEYIIGYIY--PGRPIANLCFKTYGYISMTQALTFLQDLKLGHYMKIPPRSMFAVQLVGTI 564 (761)
T ss_pred HHHhhhhccCCc--cHHHHHHHHHHhhc--CCchHHHHHHHHhchhhHHHHHHHHhhccceeeecCChHHHHHHHHHHHH
Confidence 999999999998 59999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHH-HHHHhhcCCCCC--CCCCCCCchhHHHHHHHhh-hcccC------CCCchhhHHHHHHHHHHHHHHHHHH
Q 010082 356 MGCVIAPLT-FWMYWTAFDIGS--PDGPYKAPYAVIFREMAIL-GIEGF------SELPKHCLALCCGFFVAALVINLLR 425 (518)
Q Consensus 356 vga~v~~~v-~~~l~~~~~i~~--~~~~~~~P~a~~~~~~a~~-g~~G~------~~lp~~~~~~~~~g~~lg~~l~~~~ 425 (518)
++++|+.+| .|++.++.|+|+ +++.|+||+.++++++|++ |.+|+ .+.++...+|+++|++.+++...++
T Consensus 565 vs~~Vn~gv~~W~m~~I~~iC~~~~~s~~TCP~~rvffnASvIWGlIGP~riF~~~g~Y~~l~wFFLiGa~~pv~vw~~~ 644 (761)
T KOG2262|consen 565 VAGFVNLGVAWWLMYSIPNICTTDQNSPWTCPSDRVFFNASVIWGLIGPKRIFGSLGIYPGLNWFFLIGALAPVLVWLLQ 644 (761)
T ss_pred hheeeeHHhHHHHHhcccccccCCCCCCccCCCCceEEeceeeeecccchhhcCCCCccCcchHHHHHHHHhhHHHHHHH
Confidence 999999999 789999999996 4578999999999999988 77773 3566777888889999999999999
Q ss_pred hhcccc-cccccccchhcccccccch----hhHHHHHHHHHHHHHHHHhCcCcccchhhhcchhhhhhhHhhHHHHHH-H
Q 010082 426 DATPTK-ISRFIPVPMAMAVPFYIGA----YFAIDMFVGTVILFIWELVNRKDSEDYAGAVASGLICGDGIWTIPSAI-L 499 (518)
Q Consensus 426 ~~~p~~-~~~~~p~~~~~~~g~~~p~----~~~~~~~vG~~~~~~~~r~~~~~~~ky~y~laagL~aG~ai~gviia~-~ 499 (518)
+.+||+ |.+.++.|+.+++...+|| ++++++++|.+++++++||++.||+||||++|||||+|.+++++++++ +
T Consensus 645 k~fPk~~w~~~i~~pvl~gg~~~mPpat~vny~sw~iv~fifny~i~r~~~~WW~kYNyvLsaaldaG~a~~~vliffcv 724 (761)
T KOG2262|consen 645 KKFPKKKWIKQINPPVLFGGTANMPPATAVNYTSWAIVGFIFNYYIFRYRRSWWQKYNYVLSAALDAGVAFMGVLIFFCV 724 (761)
T ss_pred HhcchhhhhhccCcceEecccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhhcccchhHHHhHhhhee
Confidence 999975 4676777999998888886 689999999999999999999999999999999999999999999986 7
Q ss_pred HhcCCCCCcce
Q 010082 500 SIFRVNPPVCM 510 (518)
Q Consensus 500 ~~~gv~~~~~~ 510 (518)
+..|++.+ ||
T Consensus 725 ~~~~~~~~-WW 734 (761)
T KOG2262|consen 725 QYPGISLN-WW 734 (761)
T ss_pred ccCCCccc-cc
Confidence 88899985 77
|
|
| >TIGR00727 ISP4_OPT small oligopeptide transporter, OPT family | Back alignment and domain information |
|---|
| >PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast | Back alignment and domain information |
|---|
| >TIGR00728 OPT_sfam oligopeptide transporters, OPT superfamily | Back alignment and domain information |
|---|
| >TIGR00733 putative oligopeptide transporter, OPT family | Back alignment and domain information |
|---|
| >COG1297 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00733 putative oligopeptide transporter, OPT family | Back alignment and domain information |
|---|
| >PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00