Citrus Sinensis ID: 010307
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 513 | ||||||
| 225424418 | 514 | PREDICTED: vacuolar fusion protein CCZ1 | 1.0 | 0.998 | 0.789 | 0.0 | |
| 255557247 | 513 | conserved hypothetical protein [Ricinus | 1.0 | 1.0 | 0.791 | 0.0 | |
| 359472555 | 527 | PREDICTED: vacuolar fusion protein CCZ1 | 1.0 | 0.973 | 0.770 | 0.0 | |
| 224101919 | 524 | predicted protein [Populus trichocarpa] | 0.994 | 0.973 | 0.771 | 0.0 | |
| 356513030 | 499 | PREDICTED: vacuolar fusion protein CCZ1 | 0.972 | 1.0 | 0.749 | 0.0 | |
| 356524626 | 499 | PREDICTED: vacuolar fusion protein CCZ1 | 0.970 | 0.997 | 0.751 | 0.0 | |
| 357521401 | 545 | hypothetical protein MTR_8g105900 [Medic | 0.998 | 0.939 | 0.706 | 0.0 | |
| 449449030 | 493 | PREDICTED: vacuolar fusion protein CCZ1 | 0.959 | 0.997 | 0.725 | 0.0 | |
| 222424098 | 497 | AT1G80910 [Arabidopsis thaliana] | 0.964 | 0.995 | 0.708 | 0.0 | |
| 6503303 | 513 | F23A5.27 [Arabidopsis thaliana] | 0.964 | 0.964 | 0.706 | 0.0 |
| >gi|225424418|ref|XP_002285048.1| PREDICTED: vacuolar fusion protein CCZ1 homolog isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/514 (78%), Positives = 459/514 (89%), Gaps = 1/514 (0%)
Query: 1 MGLASASTA-TDGMQLCIFDLRRGQNEGQELDKILFFFPADLPFSTQLSVIGLSEGLITF 59
MGL+SA+T +G Q CIFDLRRGQ+EGQELDKILFF+PADLPFSTQLSVIGLSEGLITF
Sbjct: 1 MGLSSANTVVNEGFQFCIFDLRRGQHEGQELDKILFFYPADLPFSTQLSVIGLSEGLITF 60
Query: 60 TRIFSPEAACEIIEAERHSHVFYEAETDIWMVMVVEKGKDSDAIWRIDALRKVLKEVHSL 119
TRIFSPEAACE+IEAERHSHVF++AE DIWMVMVVEK K+SDAIWRIDALR+VLKEVHSL
Sbjct: 61 TRIFSPEAACEVIEAERHSHVFHQAEPDIWMVMVVEKSKESDAIWRIDALRRVLKEVHSL 120
Query: 120 FVMFYGSIRAMLEKDPSGGLIRSHLYPFIMDYLSDFPVGKKLQLPSFRDCLKERGTVQML 179
FVMF+GSIR++L+K+PSG L+RSHLY FIMDYLSDF VGKK++LPSFRDCLKERGTVQML
Sbjct: 121 FVMFHGSIRSLLDKEPSGELVRSHLYAFIMDYLSDFLVGKKIKLPSFRDCLKERGTVQML 180
Query: 180 TMGREAAIEVQSLVSVLDSCAGNSSCYSMILFHDLLVSTTLSPDDTINLFTYAVLRLSPN 239
T+GREAA+EVQSLV VL+SCAGN+ CYS++LF DLLVSTTLSPDDTINLFTYAVLRL+PN
Sbjct: 181 TVGREAALEVQSLVRVLESCAGNAPCYSLVLFQDLLVSTTLSPDDTINLFTYAVLRLAPN 240
Query: 240 ALSSGVNSWSYIRRGSTSSHFVSGSALTHSGPVSEQIYHSSDTSPVGNNINRVTRALQHG 299
AL S +SWSY+R+G+T+S + S + SG VSEQ Y S DTSP G + V R LQH
Sbjct: 241 ALLSRASSWSYLRKGNTASQIAAASVMASSGSVSEQFYGSRDTSPHGGERSHVVRPLQHN 300
Query: 300 KWYKGKDGFLVTDIWGVDVGSLVCATPTVWLQQTEEAMYLCPYQFKSLTLILLIPVSSIL 359
KWYKG DGFLVTDIWG +VGS+V ATPTV L QTEE MYLC YQ KSLTLILL P+SSIL
Sbjct: 301 KWYKGTDGFLVTDIWGPEVGSMVSATPTVLLHQTEERMYLCVYQHKSLTLILLFPISSIL 360
Query: 360 NGEQGVALVKQQLLENASLKILKVEEKLSKGWGGENAYHVSGYRYLLVDGDRNISRASPP 419
NGEQG+++VKQQ++ENASLK+LKVEEKLSKGWGGENAYHV GYRYLLVDGDRN+SRASPP
Sbjct: 361 NGEQGISVVKQQIVENASLKMLKVEEKLSKGWGGENAYHVGGYRYLLVDGDRNVSRASPP 420
Query: 420 GKVTTLAKESLLALSKLRDEVDLEKSRAKRDNAGCEKDLEVSIRAKNNAWAIARITGGKE 479
GKVTTL KESL++LS LR+E+DLEKSRAK D+ EKDLE+ IRAKNNAW IAR T GKE
Sbjct: 421 GKVTTLTKESLISLSNLREEIDLEKSRAKWDDPDHEKDLEICIRAKNNAWVIARTTRGKE 480
Query: 480 LYMVLEKASETLLYASDAVEKFSNRYCNGAFSLD 513
LYMVLEKA+ETLL+ASDA+EKFSNRYC+GAFSLD
Sbjct: 481 LYMVLEKANETLLFASDAIEKFSNRYCSGAFSLD 514
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255557247|ref|XP_002519654.1| conserved hypothetical protein [Ricinus communis] gi|223541071|gb|EEF42627.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|359472555|ref|XP_003631164.1| PREDICTED: vacuolar fusion protein CCZ1 homolog isoform 2 [Vitis vinifera] gi|297737604|emb|CBI26805.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224101919|ref|XP_002312475.1| predicted protein [Populus trichocarpa] gi|222852295|gb|EEE89842.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356513030|ref|XP_003525217.1| PREDICTED: vacuolar fusion protein CCZ1 homolog [Glycine max] | Back alignment and taxonomy information |
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| >gi|356524626|ref|XP_003530929.1| PREDICTED: vacuolar fusion protein CCZ1 homolog-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357521401|ref|XP_003630989.1| hypothetical protein MTR_8g105900 [Medicago truncatula] gi|355525011|gb|AET05465.1| hypothetical protein MTR_8g105900 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449449030|ref|XP_004142268.1| PREDICTED: vacuolar fusion protein CCZ1 homolog [Cucumis sativus] gi|449510583|ref|XP_004163706.1| PREDICTED: vacuolar fusion protein CCZ1 homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|222424098|dbj|BAH20009.1| AT1G80910 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|6503303|gb|AAF14679.1|AC011713_27 F23A5.27 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 513 | ||||||
| TAIR|locus:2025782 | 497 | AT1G80910 "AT1G80910" [Arabido | 0.964 | 0.995 | 0.683 | 3.1e-186 | |
| TAIR|locus:2200547 | 515 | AT1G16020 "AT1G16020" [Arabido | 0.976 | 0.972 | 0.643 | 2.8e-176 | |
| UNIPROTKB|Q0VD30 | 480 | CCZ1 "Vacuolar fusion protein | 0.413 | 0.441 | 0.288 | 6.1e-20 | |
| UNIPROTKB|P86790 | 482 | CCZ1B "Vacuolar fusion protein | 0.415 | 0.441 | 0.289 | 1e-19 | |
| UNIPROTKB|P86791 | 482 | CCZ1 "Vacuolar fusion protein | 0.415 | 0.441 | 0.289 | 1e-19 | |
| MGI|MGI:2141070 | 480 | Ccz1 "CCZ1 vacuolar protein tr | 0.415 | 0.443 | 0.285 | 1.7e-19 | |
| UNIPROTKB|Q5ZLN2 | 476 | CCZ1 "Vacuolar fusion protein | 0.415 | 0.447 | 0.273 | 2.1e-19 | |
| ZFIN|ZDB-GENE-040426-698 | 506 | ccz1 "CCZ1 vacuolar protein tr | 0.411 | 0.416 | 0.277 | 1.5e-17 | |
| DICTYBASE|DDB_G0288589 | 445 | DDB_G0288589 "DUF2049 family p | 0.426 | 0.492 | 0.256 | 6.9e-17 | |
| FB|FBgn0035470 | 485 | CG14980 [Drosophila melanogast | 0.471 | 0.498 | 0.241 | 1.5e-12 |
| TAIR|locus:2025782 AT1G80910 "AT1G80910" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1806 (640.8 bits), Expect = 3.1e-186, P = 3.1e-186
Identities = 352/515 (68%), Positives = 419/515 (81%)
Query: 1 MGLASASTATDGMQLCIFDLRRGQNEGQELDKILFFFPADLPFSTQLSVIGLSEGLITFT 60
MG+AS S+ T+ ++LC+FDLRRGQ+EGQELDKILFF+P DL FSTQLSVIGLSEGLITFT
Sbjct: 1 MGMASMSSGTESLRLCVFDLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFT 60
Query: 61 RIFSPEAACEIIEAERHSHVFYEAETDIWMVMVVEKGKDSDAIWRIDALRKVLKEVHSLF 120
R+FSPEAACE+IEAERHSHVFYEAE DIWMVM+VEK K+ +A+WRIDALR+VLKEVHSLF
Sbjct: 61 RLFSPEAACEVIEAERHSHVFYEAEPDIWMVMIVEKNKEIEAVWRIDALRRVLKEVHSLF 120
Query: 121 VMFYGSIRAMLEKDPSGGLIRSHLYPFIMDYLSDFPVGKKLQLPSFRDCLKERGTVQMLT 180
VMF GSIRA+LEK+P+GGL+RSHLYPFI DYL+D VGKK QLPSFRD LKERGTVQMLT
Sbjct: 121 VMFQGSIRALLEKEPTGGLVRSHLYPFITDYLNDLFVGKKQQLPSFRDTLKERGTVQMLT 180
Query: 181 MGREAAIEVQSLVSVLDSCAGNSSCYSMILFHDLLVSTTLSPDDTINLFTYAVLRLSPNA 240
+ R+AA+EVQSLV VLDSCAG C+S+ILFHDLLVSTTLSPDDT++LF ++V+RL+ NA
Sbjct: 181 LARDAALEVQSLVGVLDSCAGTVRCHSVILFHDLLVSTTLSPDDTVDLFAFSVMRLTTNA 240
Query: 241 LSSGVNSWSYIRRGSTSSHFVSGSALTHSGPVSEQIYHSSDTSPVGN--NINRVTRALQH 298
LSSG +SWSY+R+GS S S S T P+ S T P GN + RV R LQH
Sbjct: 241 LSSGTSSWSYLRKGSGSPQISSRS--TTVPPLG-----SGGTLPSGNGSSTGRVIRPLQH 293
Query: 299 GKWYKGKDGFLVTDIWGVDVGSLVCATPTVWLQQTEEAMYLCPYQFKSLTLILLIPVSSI 358
KW KGKDGFLVTDIWG+D ATPT+ +Q+T+E+ YL YQ+KSLTL+LL+P+++I
Sbjct: 294 DKWSKGKDGFLVTDIWGLD------ATPTILIQKTQESFYLLTYQYKSLTLVLLVPIAAI 347
Query: 359 LNGEQGVALVKQQLLENASLKILKVEEKLSKGWGGENAYHVSGYRYLLVDGDRNISRASP 418
+NGE ++ VKQQ++ENAS KILKVEEKLSKGWGGENAYHVSGYRYLLVD D +SRASP
Sbjct: 348 VNGELDISFVKQQVIENASTKILKVEEKLSKGWGGENAYHVSGYRYLLVDNDMEVSRASP 407
Query: 419 PGKVXXXXXXXXXXXXXXRDEVDLEKSRAKRDNAGCEKDLEVSIRAKNNAWAIARITGGK 478
PGKV R+EVD EK+R+K+ EKD+E+ IRAKNN W IAR+ GK
Sbjct: 408 PGKVATLAKESLLALNKLREEVDTEKNRSKQ-----EKDMEICIRAKNNTWVIARLNRGK 462
Query: 479 ELYMVLEKASETLLYASDAVEKFSNRYCNGAFSLD 513
ELYM LEKASETLL A+D+V++FSNRYC+GAF +D
Sbjct: 463 ELYMALEKASETLLDATDSVQRFSNRYCSGAFPMD 497
|
|
| TAIR|locus:2200547 AT1G16020 "AT1G16020" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q0VD30 CCZ1 "Vacuolar fusion protein CCZ1 homolog" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P86790 CCZ1B "Vacuolar fusion protein CCZ1 homolog B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P86791 CCZ1 "Vacuolar fusion protein CCZ1 homolog" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| MGI|MGI:2141070 Ccz1 "CCZ1 vacuolar protein trafficking and biogenesis associated" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5ZLN2 CCZ1 "Vacuolar fusion protein CCZ1 homolog" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040426-698 ccz1 "CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0288589 DDB_G0288589 "DUF2049 family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0035470 CG14980 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| gw1.VIII.987.1 | hypothetical protein (524 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 513 | |||
| pfam08217 | 466 | pfam08217, DUF1712, Fungal domain of unknown funct | 1e-154 |
| >gnl|CDD|219750 pfam08217, DUF1712, Fungal domain of unknown function (DUF1712) | Back alignment and domain information |
|---|
Score = 446 bits (1150), Expect = e-154
Identities = 168/505 (33%), Positives = 246/505 (48%), Gaps = 48/505 (9%)
Query: 15 LCIFDLRRGQNEGQELDKILFFFPADLPFSTQLSVIGLSEGLITFTRIFSPEAACEIIEA 74
+F+ GQ EG+E KILF+ P D+ + +LS IGL E + TFTR FSPE CEIIE
Sbjct: 1 FVVFNPSFGQKEGEEHKKILFYHPFDISLNEKLSKIGLIEAIWTFTRTFSPEDPCEIIET 60
Query: 75 ERHSHVFYEAETDIWMVMVVE---KGKDSDAIWRIDALRKVLKEVHSLFVMFYGSIRAML 131
E+ + +FYE E D WMV+VVE K+ + R VLK+ + F +F GS ++L
Sbjct: 61 EKTTQIFYEPEPDFWMVLVVEVEIDNKEIPNVIEYRIYRAVLKQCYQFFRLFNGSFSSLL 120
Query: 132 EKDPSGGLIRSHLYPFIMDYLSDFPVGKKLQLPSFRDCLKERGTVQMLTMGREAAIEVQS 191
E L R L + ++ F + LQLP D L G+VQ L + +E + +Q
Sbjct: 121 E-----DLERELLTDRLNEFFVPF--WQDLQLPPECDLLDMLGSVQNLPLDKENYLGIQG 173
Query: 192 LVSVLDSCAGNSSCYSMILFHDLLVSTTLSPDDTINLFTYAVLRLSPNALSSGVNSWSYI 251
+ DS G+ C+S L+HD LV TLS DT L+ Y + L P S V SW+ I
Sbjct: 174 FIRNFDSTFGSLPCHSNWLYHDHLVYGTLSSHDTRILYNYTLPILFPYDAISEVGSWTGI 233
Query: 252 RRGSTSSHFVSGSALTHSGPVSEQIYHSSDTSPVGNNINRVTRALQHGKWYKGKDGFL-- 309
R S S + P SS+ G++ ++ GKDGFL
Sbjct: 234 R--------NSPSLFMNYTPSGRVRSGSSEN---GDSKAKLD----------GKDGFLIS 272
Query: 310 -VTDIWGVDVGSLVCATPTVWLQQTEEAMYLCPYQFKS-LTLILLIPVSSILNGEQGVAL 367
+ ++ + ++ L Y K LTL L P +N + +
Sbjct: 273 PLAKVFLPESYL------PFNTDDEQKYYNLLFYYAKDVLTLCLFDPAFDKINEQDYLKE 326
Query: 368 VKQQLLENASLKILKVEEKLSKGWGGENAYHVSGYRYLLVDGDRNISRASPPGKVTTLAK 427
+ QL S L +EE LSK GENAY S ++YL + D R+S P K T+LAK
Sbjct: 327 LDAQLYPQLSTLALDIEEHLSKEANGENAYDDSSFKYLYFNKDNLKIRSSIPRKKTSLAK 386
Query: 428 ESLLALSKLR--DEVDLEKSRAKRDNAGCEKDLEVSIRAKNNAWAIARITGGKELYMVLE 485
S L+ + L+ +++ + SR+K D E+ ++ NN W + R T G+ELY++L+
Sbjct: 387 SSGLSRNVLKLIEDITTDFSRSKAKA-----DEEIILKTLNNGWLVYRKTNGRELYIILK 441
Query: 486 KASETLLYASDAVEKFSNRYCNGAF 510
S TLL ++ + + R+ NG F
Sbjct: 442 NWSSTLLDLTEELGRDVTRWWNGIF 466
|
The function of this family of proteins is unknown. Length = 466 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 513 | |||
| KOG2622 | 510 | consensus Putative myrosinase precursor [Defense m | 100.0 | |
| PF08217 | 604 | DUF1712: Fungal domain of unknown function (DUF171 | 100.0 | |
| PF03164 | 415 | Mon1: Trafficking protein Mon1; InterPro: IPR00435 | 98.79 | |
| KOG0997 | 523 | consensus Uncharacterized conserved protein Sand [ | 97.48 | |
| KOG2622 | 510 | consensus Putative myrosinase precursor [Defense m | 97.37 | |
| PF04099 | 142 | Sybindin: Sybindin-like family ; InterPro: IPR0072 | 95.27 | |
| KOG3368 | 140 | consensus Transport protein particle (TRAPP) compl | 90.46 |
| >KOG2622 consensus Putative myrosinase precursor [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-108 Score=825.02 Aligned_cols=482 Identities=53% Similarity=0.814 Sum_probs=451.0
Q ss_pred CCCCCCCCCCCC-----------eE-EEEEcCCCCCCCccccCcEEEEcCCCCChhhhhhhhhHHHHHHHhhhccCCCcc
Q 010307 1 MGLASASTATDG-----------MQ-LCIFDLRRGQNEGQELDKILFFFPADLPFSTQLSVIGLSEGLITFTRIFSPEAA 68 (513)
Q Consensus 1 ~~~~~~~~~~~~-----------~~-f~Ifnp~~g~~Eg~e~~kILfY~P~~~~~n~ql~~IGL~egiv~Ft~~Fs~~~~ 68 (513)
|||+|+.++.|+ |. ||||||++|++||+|++|||||||++...++|++.|||+||+|+||++|+|+.+
T Consensus 1 m~~as~~sg~~~scsq~~qF~~~L~~ffv~~pr~G~~EGqE~nkIlffhP~~~~~~~q~~viGl~EalV~FTr~Fspe~~ 80 (510)
T KOG2622|consen 1 MAMASMSSGNEPSCSQEKQFPPALRSFFVFDPRRGQREGQELNKILFFHPNDLEFSTQLSVIGLSEALVTFTRLFSPEAA 80 (510)
T ss_pred CcccccCCCCCccccccccccHHHHHHhhcCcccCcccchhhceeEEECCCccchhhheehhhHHHHHHHHHHhcCcchh
Confidence 899999998888 65 899999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecceEEEEEEecCCeEEEEEEEcCCCC--------------CchhhHHHHHHHHHHHHHHHHHhccchhHhhhcC
Q 010307 69 CEIIEAERHSHVFYEAETDIWMVMVVEKGKDS--------------DAIWRIDALRKVLKEVHSLFVMFYGSIRAMLEKD 134 (513)
Q Consensus 69 ~~~I~T~k~~~v~~e~Ep~~wm~~~v~k~~~~--------------~~~i~~~~l~~~L~~~Y~~F~Lf~Gsf~~~l~~~ 134 (513)
|+++|+++++++++++||++||||++++.+.- +.+.-..+++++|++||+||+||+|+|+.....
T Consensus 81 ~~v~e~e~~~~ff~e~e~~~wmVmvv~~~~~~~~~~~i~k~~~~~~e~~ll~~~~~s~lr~~y~m~~lF~Gtf~~s~~~- 159 (510)
T KOG2622|consen 81 CEVIEAERHSHFFYEAEPDIWMVMVVEKNKEIEAQWRIDKLRRVLKEVHLLFVMFSSSLRALYEMEPLFTGTFSRSHLY- 159 (510)
T ss_pred hhhhhhcccccccccCCCceEEEEEEeeCChhheeeecchhHHHhhhhHHHHHHHHHHHHHHHHhchhhcCCcchhhcC-
Confidence 99999999999999999999999999865421 234457889999999999999999999988875
Q ss_pred CChhHHHHhhhHHHHHhhhcCcCCcccCCCCCCchhhccCCcceeccCchhHHHHHHHHHHHHhhhCCCceEEEEEecCc
Q 010307 135 PSGGLIRSHLYPFIMDYLSDFPVGKKLQLPSFRDCLKERGTVQMLTMGREAAIEVQSLVSVLDSCAGNSSCYSMILFHDL 214 (513)
Q Consensus 135 ~~~~~L~~~L~~F~~~yl~~~~~~~~l~l~~~~d~l~~~~gi~~lpl~k~~~L~iqs~in~l~~~f~~~i~~~~~Ly~d~ 214 (513)
+....+++||+.||.+|++...+. .||.++.++||+||||++.+||+||+|||.++++++ .+||++|||+|+
T Consensus 160 ~~I~~~keRLdfFf~kylqll~~~-------~~dlLd~~GgV~fl~l~~~tyL~VqSlv~~l~e~~~-v~~~smfLyqD~ 231 (510)
T KOG2622|consen 160 PFITDYKERLDFFFGKYLQLLHFR-------SCDLLDERGGVQFLTLARDTYLEVQSLVNVLDECAG-VRCHSMFLYQDL 231 (510)
T ss_pred chHHHHHHHHHHHHHhhccccccc-------ccchhhhcCCEEEEEcCcchhHHHHHHHHHHHHhhC-hhhhhhhhhhhh
Confidence 678899999999999999976555 789999999999999999999999999999999999 999999999999
Q ss_pred ccccCCCchhHHHHHHHHhhccCCCCcCCCCCcccccccCCCccccccCCCcCCCCCcccccccCCCCCCC--CCccccc
Q 010307 215 LVSTTLSPDDTINLFTYAVLRLSPNALSSGVNSWSYIRRGSTSSHFVSGSALTHSGPVSEQIYHSSDTSPV--GNNINRV 292 (513)
Q Consensus 215 Li~S~L~~~d~~~Ly~YL~~~l~p~~~~~e~~~~~~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~~~~~ 292 (513)
|||++|+++||.+||+||+++|+|+++++|+++|||+|||..++.. +.++..+.|+|+.+.+|. |++..++
T Consensus 232 Lv~t~Ls~dD~~~Lf~ylt~~L~p~~lsp~~~~~~~~~kGr~s~~~-------s~~st~ap~lG~~~t~~~~~~s~~g~~ 304 (510)
T KOG2622|consen 232 LVSTTLSQDDTVDLFKYLTMRLTPRALSPETSSWSYLRKGRGSPII-------SSRSTNAPHLGSFLTLPSHNGSDQGTV 304 (510)
T ss_pred hheeccCcccHHHHHHHHHhhccccccCCCccchhhhhcCCCCCCc-------ccCCCCCcccccccccccccCCccccc
Confidence 9999999999999999999999999999999999999999854444 344567788999988774 4668899
Q ss_pred cccccccccccCCCceeeecccCccCCCcccCCCEEEeccCCceeEEEEEeccCcEEEEEeeCCcccchhhhHHHHHHHH
Q 010307 293 TRALQHGKWYKGKDGFLVTDIWGVDVGSLVCATPTVWLQQTEEAMYLCPYQFKSLTLILLIPVSSILNGEQGVALVKQQL 372 (513)
Q Consensus 293 ~~~~~~~~~~~~~~G~~~t~~~~~~~~~~~~~~P~V~l~~~~e~~~L~vY~~~~~tl~l~i~~~~~~~~~~~~~~l~~~L 372 (513)
+||+|.++|-++++||+.|+.|+++ .+|.|+.+...+++|+++|+.++.|++++.+...+++++..+.+.++|.
T Consensus 305 ~~~~~~d~~~~~~~~f~~Td~~~~e------~~~~il~~~~~~~~~~~~~a~~s~tlv~~rrl~~iV~~~L~i~~s~~~~ 378 (510)
T KOG2622|consen 305 IRPLQPDKWCKGKDGFLNTDIWGLE------ALPTILYQATQEAVYLLIYASKSLTLVLLRRLDAIVNGQLTISASKQQV 378 (510)
T ss_pred ccccCCCceeeeccceeeeeeeccc------cccchhhhhhhhHHHHHhhcccCcceeeeehhhhhcCcceeehhhhHHH
Confidence 9999999999999999999999988 5799999988999999999999999999999999999987888999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCceeEEEEcCcccccccCCCCCcccCCHHHHHHHHHHHHHHHHHhhhhccCCC
Q 010307 373 LENASLKILKVEEKLSKGWGGENAYHVSGYRYLLVDGDRNISRASPPGKVTTLAKESLLALSKLRDEVDLEKSRAKRDNA 452 (513)
Q Consensus 373 ~~~~s~~i~~~~~~~~~~~~~~~~~~~~~~ryiy~n~~~~a~r~s~~~~~~~l~~e~l~~l~~l~~ei~~~~s~~~~~~~ 452 (513)
.++++..|.+.++..+.+|.+.||+|.++|||+..++..-++|++|+++++++.|| .++|+|++|++++++|++
T Consensus 379 ~~n~~~r~~k~ee~p~f~~iyfN~~h~s~~~~ll~~~~~~v~rssps~~ltt~~p~--~~lnkl~~dv~S~f~r~~---- 452 (510)
T KOG2622|consen 379 IENASKRILKSEEEPSFGWIYFNAYHMSGYRYLLVDNDTVVSRSSPSGKLTTLAPE--LALNKLREDVDSEFTRVK---- 452 (510)
T ss_pred HhcccchhccCcccCccceeeecchhccceeeeeccCCceeeccCCCcceeecCCh--HHHHHHHHhhhccccccc----
Confidence 99999999999999999999999999999999999999999999999999999999 678999999999999987
Q ss_pred CCCCcceEEEEecCCeEEEEEeeCCEEEEEEEecCCccHHhHHHHHHHHHHhhcCCcccc
Q 010307 453 GCEKDLEVSIRAKNNAWAIARITGGKELYMVLEKASETLLYASDAVEKFSNRYCNGAFSL 512 (513)
Q Consensus 453 ~~~~~~Ei~vKt~~d~WVv~k~s~~Relyvvl~~k~~tL~~v~~ev~k~~~~~f~gif~~ 512 (513)
++|+|||||++|||||||||+|+|++||||++||+||+||++||+|||++||+|||||
T Consensus 453 --eed~Ei~Vka~sd~WVV~kk~~~r~lymil~~~n~tL~dv~~~v~~~~~~~f~~iFf~ 510 (510)
T KOG2622|consen 453 --EEDMEICVKAKSDYWVVAKKSRGRELYMILEKKNATLLDVTDEVKRFSNRYFSGIFFM 510 (510)
T ss_pred --cccceeEEEecCcEEEEEEecCCceEEEEEcCCcchhhhhHHHHHHHHHHhhhccccC
Confidence 6899999999999999999999999999999999999999999999999999999996
|
|
| >PF08217 DUF1712: Fungal domain of unknown function (DUF1712); InterPro: IPR013176 The function of this fungal family of proteins is unknown | Back alignment and domain information |
|---|
| >PF03164 Mon1: Trafficking protein Mon1; InterPro: IPR004353 Members of this family have been called SAND proteins [] although these proteins do not contain a SAND domain | Back alignment and domain information |
|---|
| >KOG0997 consensus Uncharacterized conserved protein Sand [Function unknown] | Back alignment and domain information |
|---|
| >KOG2622 consensus Putative myrosinase precursor [Defense mechanisms] | Back alignment and domain information |
|---|
| >PF04099 Sybindin: Sybindin-like family ; InterPro: IPR007233 Sybindin is a physiological syndecan-2 ligand on dendritic spines, the small protrusions on the surface of dendrites that receive the vast majority of excitatory synapses | Back alignment and domain information |
|---|
| >KOG3368 consensus Transport protein particle (TRAPP) complex subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 513 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 9e-06
Identities = 54/436 (12%), Positives = 114/436 (26%), Gaps = 119/436 (27%)
Query: 56 LITFTRIFSPEAAC-EIIEAERHSHVFYEAETDIWMVMVVEKGKDSDAIWRI-DALRKVL 113
L F F C ++ + + + + E D ++ R+ L
Sbjct: 22 LSVFEDAFVDNFDCKDVQDMPKS--ILSKEEIDH----IIMSKDAVSGTLRLFWTLLSKQ 75
Query: 114 KEVHSLFVMFYGSIRAMLEKDPSGGLIRSHLYPFIMDYLSDFPVGKKLQLPSFRDCL-KE 172
+E+ FV +L + Y F+M + + + + +
Sbjct: 76 EEMVQKFV------EEVLRIN----------YKFLMSPIKTEQRQPSMMTRMYIEQRDRL 119
Query: 173 RGTVQMLTMG-----------REAAIEVQSLVSVL---DSCAGNSSCYSMILFHDLLVST 218
Q+ R+A +E++ +VL +G + +
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW----------VALD 169
Query: 219 TLSPDDTINLFTYAVLRLSPNALSSGVNSW-SYIRRGSTSSHFVSGSALTH--SGPVSEQ 275
+ + W + S + L + + +
Sbjct: 170 VCLSYKVQCKMDFKIF-------------WLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 276 IYHSSDTSPVGNNINRVTRALQHGKWYKGKDGFLVTDIWGVDVGSLVCATPTVWLQQTEE 335
HSS+ ++I R L K Y ++ LV +V W
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPY--ENCLLVLL----NV-----QNAKAW-----N 260
Query: 336 AMYLCPYQFKSLTLIL--LIPVSSILNGEQG--VALVKQQ--LLENASLKIL-KV----E 384
A L+ V+ L+ ++L L + +L K
Sbjct: 261 AF-----NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315
Query: 385 EKLSKGWGGENAYHVS--------------GYRYLLVDGDRNISRASPPGKVTTLA---- 426
+ L + N +S ++++ D I +S + L
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS----LNVLEPAEY 371
Query: 427 KESLLALSKLRDEVDL 442
++ LS +
Sbjct: 372 RKMFDRLSVFPPSAHI 387
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 513 | |||
| 3cue_A | 219 | Transport protein particle 23 kDa subunit; membran | 86.54 |
| >3cue_A Transport protein particle 23 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=86.54 E-value=20 Score=34.09 Aligned_cols=128 Identities=12% Similarity=0.174 Sum_probs=86.0
Q ss_pred EEEEEcCCCCCCCccccCcEEEEcCC-----CCChhhhhhhhhHHHHHHHhhhccCCCc---------------------
Q 010307 14 QLCIFDLRRGQNEGQELDKILFFFPA-----DLPFSTQLSVIGLSEGLITFTRIFSPEA--------------------- 67 (513)
Q Consensus 14 ~f~Ifnp~~g~~Eg~e~~kILfY~P~-----~~~~n~ql~~IGL~egiv~Ft~~Fs~~~--------------------- 67 (513)
+|+|||-.= .++||.-. ..+.|+.+..-|+.-|+-.+++..+|..
T Consensus 5 sl~IiNk~G---------glIY~r~~~~~~~~l~snd~l~lag~lhsv~ai~~~ltP~~~~~~~~~~~~~~~~~~~~~g~ 75 (219)
T 3cue_A 5 TILVINKSG---------GLIYQRNFTNDEQKLNSNEYLILASTLHGVFAIASQLTPKALQLTQQTNIENTIPYIPYVGM 75 (219)
T ss_dssp EEEEECTTS---------CEEEEEECSSCCCCSCHHHHHHHHHHHHHHHHHHHHTCCSCC-----------CCCCCSCCC
T ss_pred EEEEEeCCC---------CEEeehhhccCcCCCCcchhhhhhhhhHHHHHHHhhcCCCcccccccccccccccccccccc
Confidence 688998653 36666622 2567899999999999999999888742
Q ss_pred ------------------------------------------cceEEEecceEEEEEEecCCeEEEEEEEcCC-C-----
Q 010307 68 ------------------------------------------ACEIIEAERHSHVFYEAETDIWMVMVVEKGK-D----- 99 (513)
Q Consensus 68 ------------------------------------------~~~~I~T~k~~~v~~e~Ep~~wm~~~v~k~~-~----- 99 (513)
..+.++|++.++-.++--.++.+++..+... +
T Consensus 76 ~~~~~~s~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~Td~y~l~~f~T~TGiKFVlltd~~~~~~~~s~ 155 (219)
T 3cue_A 76 SSNRSDTRNGGGNNNKHTNNEKLGSFKGDDFFKEPFTNWNKSGLRQLCTDQFTMFIYQTLTGLKFVAISSSVMPQRQPTI 155 (219)
T ss_dssp ----------------------------CCSCCSCCCCCCSSSCCEEEESSCEEEEEECTTSCEEEEEESSCC-------
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCceEEEEeCCEEEEEEEcCCCCEEEEEecCCCccccccc
Confidence 2678999999999999889999999764321 0
Q ss_pred ----------CCchhhHHHHHHHHHHHHHHHHH--hccchhHhhhcCCChhHHHHhhhHHHHHh
Q 010307 100 ----------SDAIWRIDALRKVLKEVHSLFVM--FYGSIRAMLEKDPSGGLIRSHLYPFIMDY 151 (513)
Q Consensus 100 ----------~~~~i~~~~l~~~L~~~Y~~F~L--f~Gsf~~~l~~~~~~~~L~~~L~~F~~~y 151 (513)
....+.+..++..|++.|+.|.= .--||=..-.. -.-+.+..+++.+...+
T Consensus 156 ~~~~~~~~~~~~s~l~e~~ir~ff~~VYelYvd~VmkNPFY~~~~p-I~S~~Fd~~V~~~~~~~ 218 (219)
T 3cue_A 156 ATTDKPDRPKSTSNLAIQIADNFLRKVYCLYSDYVMKDPSYSMEMP-IRSNLFDEKVKKMVENL 218 (219)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHHSCTTCCTTSC-CCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc-cccHHHHHHHHHHHHhc
Confidence 00123457889999999988862 11233222111 13356777777776543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00