Citrus Sinensis ID: 010453
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 510 | ||||||
| 449443532 | 679 | PREDICTED: dolichyl-diphosphooligosaccha | 0.970 | 0.729 | 0.721 | 0.0 | |
| 356505035 | 687 | PREDICTED: dolichyl-diphosphooligosaccha | 0.972 | 0.721 | 0.728 | 0.0 | |
| 356572268 | 688 | PREDICTED: dolichyl-diphosphooligosaccha | 0.974 | 0.722 | 0.720 | 0.0 | |
| 297744165 | 756 | unnamed protein product [Vitis vinifera] | 0.994 | 0.670 | 0.757 | 0.0 | |
| 359480291 | 690 | PREDICTED: dolichyl-diphosphooligosaccha | 0.994 | 0.734 | 0.757 | 0.0 | |
| 356537059 | 689 | PREDICTED: dolichyl-diphosphooligosaccha | 0.994 | 0.735 | 0.712 | 0.0 | |
| 224062133 | 694 | predicted protein [Populus trichocarpa] | 0.992 | 0.729 | 0.731 | 0.0 | |
| 255577958 | 699 | ribophorin II, putative [Ricinus communi | 0.964 | 0.703 | 0.713 | 0.0 | |
| 22328844 | 691 | ribophorin II (RPN2) family protein [Ara | 0.990 | 0.730 | 0.664 | 0.0 | |
| 224085660 | 695 | predicted protein [Populus trichocarpa] | 0.952 | 0.699 | 0.724 | 0.0 |
| >gi|449443532|ref|XP_004139531.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucumis sativus] gi|449508984|ref|XP_004163460.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/507 (72%), Positives = 424/507 (83%), Gaps = 12/507 (2%)
Query: 4 SGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQG 63
+G+ALE+L+GVVSLASS+IDQ MI VKNDI+KLFDS+EKYDDG YF+EK+V+ E G
Sbjct: 185 AGLALESLAGVVSLASSDIDQNMIDTVKNDILKLFDSIEKYDDGALYFEEKVVDAYEHHG 244
Query: 64 PLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLE 123
PLATTSSVVRGLTAF+SV + SLNL GD I G+AKFFLGIGIPGD K+ FDQ+DSLACLE
Sbjct: 245 PLATTSSVVRGLTAFTSVTSGSLNLPGDTIFGLAKFFLGIGIPGDAKDLFDQIDSLACLE 304
Query: 124 NNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIEN 183
NR SIPLILSLP+TV+SLTK+D LKV +NTVLGS APPLTV +V+AF S ++D SII +
Sbjct: 305 TNRFSIPLILSLPATVLSLTKEDKLKVSMNTVLGSAAPPLTVKIVKAFLSGSKDTSIISS 364
Query: 184 QELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIK 243
QELKFDP ++ LD P +FDVG Y+FVF++++ DSE YATG QVPIY++G++K
Sbjct: 365 QELKFDPLSGLHILDAFPKTFDVGNYVFVFEVVLHDSEHMDKYATGGKIQVPIYISGVVK 424
Query: 244 IENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAF 303
IENA+IAVLDSDLGSVETQKKLDL GES VS+SANHLQKLRL FQ++TP G+ FKPHQAF
Sbjct: 425 IENAEIAVLDSDLGSVETQKKLDLVGESVVSLSANHLQKLRLLFQLATPQGHGFKPHQAF 484
Query: 304 LRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRD 363
L+LRHE+ VEH FV DFLGLVEKFFYLSG+YDIQLTVGDAVMENS LR
Sbjct: 485 LKLRHESGVEHIFV------------DFLGLVEKFFYLSGQYDIQLTVGDAVMENSFLRV 532
Query: 364 IGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTIL 423
IG+++LDLPE PE A+RPP QPVD YTRYGPKAEI+HIFRAPEKRPP+ELSL FL LT L
Sbjct: 533 IGHIDLDLPEAPEKAARPPLQPVDLYTRYGPKAEISHIFRAPEKRPPKELSLTFLGLTFL 592
Query: 424 PLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLC 483
P GF++GLLRLGVNLKNFPTS VPATFA +FHL IAAV+LLY FWLKLDLFTTLK +
Sbjct: 593 PFLGFLVGLLRLGVNLKNFPTSTVPATFAFLFHLSIAAVILLYTFFWLKLDLFTTLKAVG 652
Query: 484 FLGVFLMVVGHRTLSHLASASAKLKSA 510
LG+ L+ +GHRTLSHLAS SAKLKSA
Sbjct: 653 ILGILLVFLGHRTLSHLASTSAKLKSA 679
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356505035|ref|XP_003521298.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356572268|ref|XP_003554291.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297744165|emb|CBI37135.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359480291|ref|XP_002272576.2| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356537059|ref|XP_003537048.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224062133|ref|XP_002300771.1| predicted protein [Populus trichocarpa] gi|222842497|gb|EEE80044.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255577958|ref|XP_002529851.1| ribophorin II, putative [Ricinus communis] gi|223530679|gb|EEF32552.1| ribophorin II, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|22328844|ref|NP_193847.2| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|334186764|ref|NP_001190785.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|75163691|sp|Q93Z16.1|RPN2_ARATH RecName: Full=Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; AltName: Full=Protein HAPLESS 6; AltName: Full=Ribophorin II; Short=RPN-II; AltName: Full=Ribophorin-2; Flags: Precursor gi|16604454|gb|AAL24233.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gi|18958022|gb|AAL79584.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gi|332659008|gb|AEE84408.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|332659010|gb|AEE84410.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|224085660|ref|XP_002307654.1| predicted protein [Populus trichocarpa] gi|222857103|gb|EEE94650.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 510 | ||||||
| TAIR|locus:2127328 | 691 | HAP6 "HAPLESS 6" [Arabidopsis | 0.962 | 0.710 | 0.580 | 4.3e-148 | |
| UNIPROTKB|P04844 | 631 | RPN2 "Dolichyl-diphosphooligos | 0.786 | 0.635 | 0.250 | 8.5e-21 | |
| UNIPROTKB|F1PBH2 | 562 | RPN2 "Uncharacterized protein" | 0.786 | 0.713 | 0.248 | 3e-20 | |
| UNIPROTKB|F1PCT7 | 647 | RPN2 "Uncharacterized protein" | 0.786 | 0.619 | 0.248 | 6e-20 | |
| UNIPROTKB|Q3SZI6 | 631 | RPN2 "Dolichyl-diphosphooligos | 0.786 | 0.635 | 0.245 | 3.7e-19 | |
| ZFIN|ZDB-GENE-030131-7928 | 643 | rpn2 "ribophorin II" [Danio re | 0.798 | 0.632 | 0.238 | 6e-19 | |
| FB|FBgn0034277 | 634 | OstDelta "Oligosaccharide tran | 0.774 | 0.623 | 0.242 | 9.9e-19 | |
| UNIPROTKB|E1C8Z0 | 631 | RPN2 "Dolichyl-diphosphooligos | 0.645 | 0.521 | 0.261 | 3.9e-18 | |
| UNIPROTKB|F1NE20 | 631 | RPN2 "Dolichyl-diphosphooligos | 0.645 | 0.521 | 0.261 | 3.9e-18 | |
| UNIPROTKB|E1BSQ3 | 632 | RPN2 "Dolichyl-diphosphooligos | 0.645 | 0.520 | 0.261 | 4e-18 |
| TAIR|locus:2127328 HAP6 "HAPLESS 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1446 (514.1 bits), Expect = 4.3e-148, P = 4.3e-148
Identities = 286/493 (58%), Positives = 362/493 (73%)
Query: 4 SGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQG 63
+G+A E L+GV+SLA SE D +I +VK I+KL DS++KYDDGTFYFDEK V+ QG
Sbjct: 187 AGLAYETLAGVISLAPSEFDPSLIQSVKTGILKLSDSIQKYDDGTFYFDEKSVDA--SQG 244
Query: 64 PLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLE 123
P++TT+SV+RGLT+F++ + LNL GDKI+G+AKFFLG+GIPGD K+FF+Q+D+LACLE
Sbjct: 245 PISTTASVIRGLTSFAASESTGLNLPGDKIVGLAKFFLGVGIPGDAKDFFNQIDALACLE 304
Query: 124 NNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIEN 183
+N+ S+PLILSLPSTVISLTKK+ LKVKV+TVLGS AP L+V L +A SS + D+S+I N
Sbjct: 305 DNKFSVPLILSLPSTVISLTKKEPLKVKVSTVLGSKAPALSVKLTQALSSKSVDSSVINN 364
Query: 184 QELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIK 243
QELKFD A YFLD P +FD+G+Y FVFK+++ +S + VY T T+VPI TG I
Sbjct: 365 QELKFDADSATYFLDSFPKNFDIGKYTFVFKIVLDESAHEKVYITEAQTKVPIAATGAIS 424
Query: 244 IENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAF 303
IENA+IAVLDSD+GSVE+QKKLDL + VS+SANHLQKLRLSFQ++TPLGNAFKPHQAF
Sbjct: 425 IENAEIAVLDSDIGSVESQKKLDLTKDGAVSLSANHLQKLRLSFQLTTPLGNAFKPHQAF 484
Query: 304 LRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRD 363
+L+HE++VEH F+V +SGKK E+ LDFLGLVEK +YLSG+Y+IQLT+GDA MENSLL +
Sbjct: 485 FKLKHESQVEHIFLVKTSGKKSELVLDFLGLVEKLYYLSGKYEIQLTIGDASMENSLLSN 544
Query: 364 IGYVELDLXXXXXXXXXXXXXXVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVXXXX 423
IG++ELDL +PY+RYGPKAEI+HIFR PEK P ++LSL FL
Sbjct: 545 IGHIELDLPERPEKATRPPLQSTEPYSRYGPKAEISHIFRIPEKLPAKQLSLVFLGVIVL 604
Query: 424 XXXXXXXXXXXXXVNLKNFPTSAVPATFAVIFHLGIAAVXXXXXXXXXXXXXXXXXXXXX 483
VN+K+FP+S A A++FH GI AV
Sbjct: 605 PFIGFLIGLTRLGVNIKSFPSSTGSAISALLFHCGIGAVLLLYVLFWLKLDLFTTLKALS 664
Query: 484 XXGVFLMVVGHRT 496
GVFL+ VGHRT
Sbjct: 665 LLGVFLLFVGHRT 677
|
|
| UNIPROTKB|P04844 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PBH2 RPN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PCT7 RPN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q3SZI6 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030131-7928 rpn2 "ribophorin II" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| FB|FBgn0034277 OstDelta "Oligosaccharide transferase Delta subunit" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1C8Z0 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NE20 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BSQ3 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 510 | |||
| pfam05817 | 636 | pfam05817, Ribophorin_II, Oligosaccharyltransferas | 1e-179 |
| >gnl|CDD|218763 pfam05817, Ribophorin_II, Oligosaccharyltransferase subunit Ribophorin II | Back alignment and domain information |
|---|
Score = 518 bits (1337), Expect = e-179
Identities = 184/503 (36%), Positives = 274/503 (54%), Gaps = 36/503 (7%)
Query: 5 GIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQGP 64
G ALE + + A L D V++ +D DE + + +G
Sbjct: 167 GHALETAAELSQQAD-----------------LADIVDEIEDLVAQADELDGDYLQFEGG 209
Query: 65 LATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLEN 124
L+TT+ VVRG + ++ + ++I+ +A +FL K+ F +++LA L N
Sbjct: 210 LSTTALVVRGAYKLADHVSTEPPIKEEQIVKLANYFLSRKSVQSAKDAFSLLEALAVLSN 269
Query: 125 NRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQ 184
N+ +P+++SLP SL ++ LKVKV VLG P +V LV+A S + +++
Sbjct: 270 NKFHVPVVVSLPGPAASLHEQPVLKVKVTNVLGKPLSPASVKLVQAVKSKSTKAAVLSKV 329
Query: 185 ELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKI 244
L FD V+ L+ + A G Y FV ++ + + + +Y T L + V+G + I
Sbjct: 330 NLTFDLDGDVFELNFMSAKPASGYYTFVVEV---EGDHRYIYNTVELK---VKVSGKVSI 383
Query: 245 ENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQM-STPLGNAFKPHQAF 303
+N +++V+D D SV K+D ++ VS+SA+ QK LSFQ+ TP G PHQAF
Sbjct: 384 DNVELSVVDKDQSSVPKTTKVDYPKKAKVSLSADSHQKFVLSFQLVDTPSGKPLTPHQAF 443
Query: 304 LRLRH-ETKVEHTFVVG-SSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLL 361
+RL + +TK E FV S K ++ LD E F LSG Y++ L VGDA +ENS L
Sbjct: 444 VRLHNQKTKQEIIFVAEPDSSKAYKFELDVGARKEDFGSLSGTYELYLIVGDATLENSFL 503
Query: 362 RDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLT 421
++ VEL PE P P V+ + +GPK EI+H+FR PEKRPP +S F L
Sbjct: 504 WNVADVELKFPE------EPAPSTVEAKSLFGPKPEISHLFREPEKRPPTVVSNTFTALI 557
Query: 422 ILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKT 481
+LPL +I ++LGVN+ NFP S A++FHLG+ A+L LY +FWLKL++FTTLK
Sbjct: 558 LLPLLLLLILWMKLGVNISNFPFS----PSAILFHLGLGAILGLYYVFWLKLNMFTTLKY 613
Query: 482 LCFLGVFLMVVGHRTLSHLASAS 504
L LGVF + G+R LS +A
Sbjct: 614 LAILGVFTFLAGNRMLSQIAVKR 636
|
This family contains eukaryotic Ribophorin II (RPN2) proteins. The mammalian oligosaccharyltransferase (OST) is a protein complex that effects the cotranslational N-glycosylation of newly synthesised polypeptides, and is composed of the following proteins: ribophorins I and II (RI and RII), OST48, and Dadl, N33/IAP, OST4, STT3. The family also includes the SWP1 protein from yeast. In yeast the oligosaccharyltransferase complex is composed 7 or 8 subunits, SWP1, being one of them. Length = 636 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 510 | |||
| PF05817 | 636 | Ribophorin_II: Oligosaccharyltransferase subunit R | 100.0 | |
| KOG2447 | 287 | consensus Oligosaccharyltransferase, delta subunit | 100.0 |
| >PF05817 Ribophorin_II: Oligosaccharyltransferase subunit Ribophorin II; InterPro: IPR008814 This family consists of several eukaryotic Ribophorin II (RPN2) proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-118 Score=981.16 Aligned_cols=468 Identities=37% Similarity=0.604 Sum_probs=440.0
Q ss_pred hhhhHHHhccceecccccchHHHHHHhhcchhhhhhccccccccccccccceeecccccCCcchhhhhhhhhhhcccccc
Q 010453 4 SGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVIT 83 (510)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~~~v~~~~~eggLs~Ta~~v~g~~~la~~~~ 83 (510)
+|.|+++++.+...+ |+.+++|+|||.+.+++|+|++|+| |||||++||++|+|+|+|++++|
T Consensus 166 ~g~al~~aa~L~~~a--------------~l~~~~~~ieD~v~qaDEv~~~~Lq---FeggLs~TA~vv~g~~~la~~~~ 228 (636)
T PF05817_consen 166 LGYALHAAAQLSKQA--------------DLADIVERIEDAVAQADEVDGKYLQ---FEGGLSTTALVVRGIYKLADAVG 228 (636)
T ss_pred HHHHHHHHHhhccch--------------hhhHHHHHHHHHHHhhhhhccccee---ecCCchhhHHHHHHHHHHHHhhC
Confidence 588888888776533 4888899999999999999999999 89999999999999999999999
Q ss_pred CCCCCChhHHHHHhhhhhccCCCCChhhHHHHHHHHHhhhcCCeeeceEEEccCceeccccCCceEEEEEeccCCCCCCc
Q 010453 84 ESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPL 163 (510)
Q Consensus 84 ~~p~i~~dQi~~~anyllsr~~v~s~k~a~~l~~al~~l~~N~~~~P~~~~l~~~~~~~~~~~~l~v~Vtdvlg~~l~~~ 163 (510)
|+|+|++||++||||||||||++|++||||++++||++|++|++++|+|++++++.++.+++|.|+|+|+|+||+|++++
T Consensus 229 k~~~i~~dQivklanylLsrr~v~s~k~a~~l~~al~~L~~N~~~~Pv~i~l~~~~~~~~~~~~l~v~Vt~vlG~~~~~~ 308 (636)
T PF05817_consen 229 KKPPIKEDQIVKLANYLLSRRSVQSPKDAFNLLEALKSLSSNKFHVPVVISLESSASLSSSKPSLKVRVTNVLGQPLPPL 308 (636)
T ss_pred CCCCCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhhCCccccEEEEeCCCcccccCCCcEEEEEEeccCCcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred eEEEEEeEeecCCCceEEeccccccCCCCceEEecCCCCCCCceeEEEEEEEeecccccceeeeecceeEEEEEEEEEEE
Q 010453 164 TVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIK 243 (510)
Q Consensus 164 ~V~~~~~~~~~~~~~~v~~~~~l~~~~~~~~y~l~~~~~k~~~G~Y~~~~~v~~~d~~~~~~~~~~~~~~~~v~V~~~v~ 243 (510)
+|++++++++.+++++++++++|+++++++.|++|+++.|+++|+|++++++ . ++.++++ .+.+++|+|+++|+
T Consensus 309 ~v~~~~a~~s~~~~~~vls~~~l~~~~~~~~~~l~~~~~k~~~G~Y~~~~~~-~----~~~~~~~-~~~~~~vkV~~~v~ 382 (636)
T PF05817_consen 309 SVKLVSAISSSSDDSVVLSNKPLTFDSDKTVYELDLMSLKPARGYYKFSFSV-S----GDKRLIG-NTAQLQVKVLGEVS 382 (636)
T ss_pred hhhhhhhhhccCCcceeeccccceecCCCCeEEEecccCCCCCceEEEEEEe-c----Cccceee-eEEEEEEEEEEEEE
Confidence 9999999888888889999999998888899999999999999999999988 2 2235554 34899999999999
Q ss_pred EEeeEEEEeeCCCCccceeeeeecCCCcceeeecCCcceEEEEEEEEc-CCCCCCCceeEEEEEEe-CCceEEEEEec-c
Q 010453 244 IENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMST-PLGNAFKPHQAFLRLRH-ETKVEHTFVVG-S 320 (510)
Q Consensus 244 v~~~~v~v~d~d~~~~~~~~~l~~~~kl~~~L~ad~~~~L~l~F~l~~-~~g~~~~PhQafL~L~~-~tg~e~~fv~k-~ 320 (510)
|++++++|.|+|+++.++++++++++++..+|++|++|+++++|+|++ ++|++++||||||||+| ++|+|++|+++ +
T Consensus 383 v~~~~v~v~d~d~~~~~~~~~v~~~~k~~~~l~ad~~~~l~l~f~l~~~~~g~~~~phQafl~l~~~~t~~e~~f~~~~~ 462 (636)
T PF05817_consen 383 VENAEVSVADSDQSSAPKKTSVDYPSKLSSSLSADSHQKLKLKFSLTDKSDGKPKRPHQAFLRLTHQETGLEIIFPAEVD 462 (636)
T ss_pred EeEEEEEeecCCCCcCcceeeecccccccCCccCCCCceEEEEEEEEEcCCCCccceeEEEEEEEeCCCCceEEEeeecC
Confidence 999999999999999999999999999999999999999999999965 78899999999999999 99999999985 5
Q ss_pred CCceEEEEeccccchhhhhccCccEEEEEEEecccccCCccccceeEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCceee
Q 010453 321 SGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITH 400 (510)
Q Consensus 321 s~k~yk~~ld~~~l~~~f~~~Sg~y~v~LIVGD~~~~~p~~~~l~~v~L~f~~~~~~~~~~p~~~~e~~~ry~pkPEI~H 400 (510)
++++|++++|+++++++|.+.||+|+++|||||+.++||+.|++|+++|++++. +++.+++++.||+|||||||
T Consensus 463 ~~~~~k~~l~~~~~~~~f~~~sg~y~~~LiiGd~~~~~~~~~~l~~i~l~~~~~------~~~~~~~~~~ry~~kpEI~H 536 (636)
T PF05817_consen 463 SSGKYKFELDLKDLPKQFLYLSGPYSLSLIIGDASISNPLNWNLGDISLKFPED------APPPKYEKPVRYGPKPEIHH 536 (636)
T ss_pred CCceEEEEEeccccchhhhhcCCceeEEEEEecCCcCCceeeeeeEEEEecCCc------CCCCCccccccCCCCCceee
Confidence 567899999999999999999999999999999999999999999999999873 12245667799999999999
Q ss_pred ecCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhccChHHHHH
Q 010453 401 IFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLK 480 (510)
Q Consensus 401 iFR~peKrPP~iVS~~Ft~lvlapll~Lli~W~~lG~Nl~n~p~s~~~~~~~i~F~~sL~gie~Lf~~YWl~lnmFqTL~ 480 (510)
+||+||||||++||++|+++|++||++||++|.++|+|++|+|+++ ++++||+||+|||++|++||++|||||||+
T Consensus 537 ~Fr~~eK~pp~~vS~~F~~~vlapl~~Ll~~W~~lG~Nl~~l~~~~----~~~~F~~~l~ai~glf~~Yw~~l~lFqTL~ 612 (636)
T PF05817_consen 537 IFREPEKRPPKIVSLVFTGLVLAPLLVLLILWLKLGANLSNLPFSP----SAILFHGGLGAIEGLFFLYWLGLNLFQTLP 612 (636)
T ss_pred ecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHcCcchhhCCCCc----hHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 9999999999999999999999999999999999999999999998 499999999999999999999999999999
Q ss_pred HHHHhhHhhhhhhhHHHHHHHHHh
Q 010453 481 TLCFLGVFLMVVGHRTLSHLASAS 504 (510)
Q Consensus 481 yl~~Lg~~t~l~G~raLr~la~~r 504 (510)
|+++||+|||++|+|+||++++||
T Consensus 613 ~~~~lg~~t~~~G~r~L~~~a~~r 636 (636)
T PF05817_consen 613 YLAVLGAVTFLSGNRALRELAERR 636 (636)
T ss_pred HHHHHHHHHHHHhHHHHHHHhhcC
Confidence 999999999999999999999998
|
The mammalian oligosaccharyltransferase (OST) is a protein complex that effects the cotranslational N-glycosylation of newly synthesised polypeptides, and is composed of at least four rough ER-specific membrane proteins: ribophorins I and II (RI and RII), OST48, and Dadl. The mechanism(s) by which the subunits of this complex are retained in the ER are not well understood [].; GO: 0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity, 0018279 protein N-linked glycosylation via asparagine, 0005789 endoplasmic reticulum membrane, 0008250 oligosaccharyltransferase complex |
| >KOG2447 consensus Oligosaccharyltransferase, delta subunit (ribophorin II) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 510 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 5e-08
Identities = 45/285 (15%), Positives = 91/285 (31%), Gaps = 68/285 (23%)
Query: 182 ENQELKFDPQDAVY-FLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTG 240
E E ++ +D + F D +FD + + K ++ E + + + +
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69
Query: 241 LIKIENAKIA------VLDSDLG----SVETQKKLDLAGESTVSVSANHLQKLRLSFQMS 290
+ + ++ VL + ++T+++ + + + + +L Q+
Sbjct: 70 TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR-QPSMMTRMYIE--QRDRLYNDNQVF 126
Query: 291 TPLG-NAFKPH----QAFLRLRHETKVEHTFVVG--SSGK-----------KFEITLDFL 332
+ +P+ QA L LR V + G SGK K + +DF
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNV---LIDGVLGSGKTWVALDVCLSYKVQCKMDF- 182
Query: 333 GLVEKFFYLS-GRYDIQLTVGDAVME--NSLLRDIGYVELDLPEPPENASRPPPQPVDPY 389
K F+L+ + + V+E LL I + N +
Sbjct: 183 ----KIFWLNLKNCNSP----ETVLEMLQKLLYQIDPNWTSRSDHSSN----IKLRIHSI 230
Query: 390 TRYGPKAEITHIFRAPEKRPPQELSLAFLVL------TILPLFGF 428
+AE+ + + K L LVL F
Sbjct: 231 -----QAELRRLLK--SKPYENCL----LVLLNVQNAKAWNAFNL 264
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00