Citrus Sinensis ID: 010453


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510
MIFSGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASASAKLKSA
ccHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccEEEEcccccccccccccEEEEEEEcccccccccEEEEEEEEEEcccccEEEEcccccccccccEEEEccccccccccEEEEEEEEEEccccccEEEEEccEEEEEEEEEEEEEEEEEEEEEEEcccccccEEEEEccccccccEEEcccccEEEEEEEEEccccccccccEEEEEEEcccEEEEEEEEEccccEEEEEEccccccHHcccccccEEEEEEEEEcccccccEEEEEEEEEccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
cHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccEEEEEEEEcccccEccccccEEEEEEEccccccccccEEEEEEEEEccccEEEEEcccccccccccEEEEEcccccccccEEEEEEEEEEccccccEEEEEcEEEEEEEEEEEEEEEEEEEEEEEEccccccccEEEEEcccccccEEEcccccEEEEEEEEEccccccccccEEEEEEEcccccEEEEEEEcccccEEEEEEcccccHHHccccccEEEEEEEEcccccccccccEEEEEEEcccccccccccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
MIFSGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSvekyddgtfyfdEKLVNMReqqgplattssVVRGLTAFSSVITESLNLTGDKILGIAKFFlgigipgdtknffDQVDSLAclennrvsiplilslpstvisltkkdslKVKVNtvlgshapplTVTLVRAFsssardnsiienqelkfdpqdavyflddlpasfdvgEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAvldsdlgsvetQKKLDLAGESTVSVSANHLQKLRLSfqmstplgnafkphQAFLRLRhetkvehtfvvgssgkkfeITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLlrdigyveldlpeppenasrpppqpvdpytrygpkaeithifrapekrppqeLSLAFLVLTILPLFGFIIGLLRLgvnlknfptsavpaTFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASASAKLKSA
MIFSGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNtvlgshappltVTLVRAFSSSARDNSIIenqelkfdpqDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHtfvvgssgkkfeITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEPpenasrpppqpvdPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLShlasasaklksa
MIFSGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLpeppenasrpppqpVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVltilplfgfiigllrlgVNLKNFPTSAVPATFAVIFHLGIAAVlllyvlfwlkldlfttlktlcflGVFLMVVGHRTlshlasasaklksa
**FSGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVE**************V*ANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELD***************************ITHIF**********LSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSH***********
MIFSGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSV***********ILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLP************KVKVNTVLGSHAPPLTVTLV**********************QDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAV*****************************QKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDL********************YGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLS************
MIFSGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPE**********QPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLA*********
MIFSGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEP*********QP*DPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASAS******
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MIFSGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASASAKLKSA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query510 2.2.26 [Sep-21-2011]
Q93Z16691 Dolichyl-diphosphooligosa yes no 0.990 0.730 0.664 0.0
Q5N7W3698 Dolichyl-diphosphooligosa yes no 0.988 0.722 0.625 0.0
Q5RBM1631 Dolichyl-diphosphooligosa yes no 0.709 0.573 0.300 1e-32
P04844631 Dolichyl-diphosphooligosa yes no 0.705 0.570 0.296 7e-32
Q3SZI6631 Dolichyl-diphosphooligosa yes no 0.7 0.565 0.293 2e-29
Q9DBG6631 Dolichyl-diphosphooligosa yes no 0.701 0.567 0.290 2e-29
P25235631 Dolichyl-diphosphooligosa yes no 0.701 0.567 0.290 5e-29
Q9GL01629 Dolichyl-diphosphooligosa yes no 0.692 0.561 0.294 9e-26
Q54HG9685 Dolichyl-diphosphooligosa yes no 0.860 0.640 0.247 1e-19
>sp|Q93Z16|RPN2_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Arabidopsis thaliana GN=RPN2 PE=2 SV=1 Back     alignment and function desciption
 Score =  699 bits (1805), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/507 (66%), Positives = 417/507 (82%), Gaps = 2/507 (0%)

Query: 4   SGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQG 63
           +G+A E L+GV+SLA SE D  +I +VK  I+KL DS++KYDDGTFYFDEK V+    QG
Sbjct: 187 AGLAYETLAGVISLAPSEFDPSLIQSVKTGILKLSDSIQKYDDGTFYFDEKSVDA--SQG 244

Query: 64  PLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLE 123
           P++TT+SV+RGLT+F++  +  LNL GDKI+G+AKFFLG+GIPGD K+FF+Q+D+LACLE
Sbjct: 245 PISTTASVIRGLTSFAASESTGLNLPGDKIVGLAKFFLGVGIPGDAKDFFNQIDALACLE 304

Query: 124 NNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIEN 183
           +N+ S+PLILSLPSTVISLTKK+ LKVKV+TVLGS AP L+V L +A SS + D+S+I N
Sbjct: 305 DNKFSVPLILSLPSTVISLTKKEPLKVKVSTVLGSKAPALSVKLTQALSSKSVDSSVINN 364

Query: 184 QELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIK 243
           QELKFD   A YFLD  P +FD+G+Y FVFK+++ +S  + VY T   T+VPI  TG I 
Sbjct: 365 QELKFDADSATYFLDSFPKNFDIGKYTFVFKIVLDESAHEKVYITEAQTKVPIAATGAIS 424

Query: 244 IENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAF 303
           IENA+IAVLDSD+GSVE+QKKLDL  +  VS+SANHLQKLRLSFQ++TPLGNAFKPHQAF
Sbjct: 425 IENAEIAVLDSDIGSVESQKKLDLTKDGAVSLSANHLQKLRLSFQLTTPLGNAFKPHQAF 484

Query: 304 LRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRD 363
            +L+HE++VEH F+V +SGKK E+ LDFLGLVEK +YLSG+Y+IQLT+GDA MENSLL +
Sbjct: 485 FKLKHESQVEHIFLVKTSGKKSELVLDFLGLVEKLYYLSGKYEIQLTIGDASMENSLLSN 544

Query: 364 IGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTIL 423
           IG++ELDLPE PE A+RPP Q  +PY+RYGPKAEI+HIFR PEK P ++LSL FL + +L
Sbjct: 545 IGHIELDLPERPEKATRPPLQSTEPYSRYGPKAEISHIFRIPEKLPAKQLSLVFLGVIVL 604

Query: 424 PLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLC 483
           P  GF+IGL RLGVN+K+FP+S   A  A++FH GI AVLLLYVLFWLKLDLFTTLK L 
Sbjct: 605 PFIGFLIGLTRLGVNIKSFPSSTGSAISALLFHCGIGAVLLLYVLFWLKLDLFTTLKALS 664

Query: 484 FLGVFLMVVGHRTLSHLASASAKLKSA 510
            LGVFL+ VGHRTLS LASAS KLKSA
Sbjct: 665 LLGVFLLFVGHRTLSQLASASNKLKSA 691




Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 9EC: 9EC: .EC: 1EC: 8
>sp|Q5N7W3|RPN2_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Oryza sativa subsp. japonica GN=RPN2 PE=2 SV=1 Back     alignment and function description
>sp|Q5RBM1|RPN2_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Pongo abelii GN=RPN2 PE=2 SV=1 Back     alignment and function description
>sp|P04844|RPN2_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Homo sapiens GN=RPN2 PE=1 SV=3 Back     alignment and function description
>sp|Q3SZI6|RPN2_BOVIN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Bos taurus GN=RPN2 PE=2 SV=1 Back     alignment and function description
>sp|Q9DBG6|RPN2_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Mus musculus GN=Rpn2 PE=2 SV=1 Back     alignment and function description
>sp|P25235|RPN2_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus GN=Rpn2 PE=2 SV=2 Back     alignment and function description
>sp|Q9GL01|RPN2_PIG Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Sus scrofa GN=RPN2 PE=2 SV=1 Back     alignment and function description
>sp|Q54HG9|RPN2_DICDI Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit swp1 OS=Dictyostelium discoideum GN=swp1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query510
449443532 679 PREDICTED: dolichyl-diphosphooligosaccha 0.970 0.729 0.721 0.0
356505035 687 PREDICTED: dolichyl-diphosphooligosaccha 0.972 0.721 0.728 0.0
356572268 688 PREDICTED: dolichyl-diphosphooligosaccha 0.974 0.722 0.720 0.0
297744165 756 unnamed protein product [Vitis vinifera] 0.994 0.670 0.757 0.0
359480291 690 PREDICTED: dolichyl-diphosphooligosaccha 0.994 0.734 0.757 0.0
356537059 689 PREDICTED: dolichyl-diphosphooligosaccha 0.994 0.735 0.712 0.0
224062133 694 predicted protein [Populus trichocarpa] 0.992 0.729 0.731 0.0
255577958 699 ribophorin II, putative [Ricinus communi 0.964 0.703 0.713 0.0
22328844 691 ribophorin II (RPN2) family protein [Ara 0.990 0.730 0.664 0.0
224085660 695 predicted protein [Populus trichocarpa] 0.952 0.699 0.724 0.0
>gi|449443532|ref|XP_004139531.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucumis sativus] gi|449508984|ref|XP_004163460.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  749 bits (1934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/507 (72%), Positives = 424/507 (83%), Gaps = 12/507 (2%)

Query: 4   SGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQG 63
           +G+ALE+L+GVVSLASS+IDQ MI  VKNDI+KLFDS+EKYDDG  YF+EK+V+  E  G
Sbjct: 185 AGLALESLAGVVSLASSDIDQNMIDTVKNDILKLFDSIEKYDDGALYFEEKVVDAYEHHG 244

Query: 64  PLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLE 123
           PLATTSSVVRGLTAF+SV + SLNL GD I G+AKFFLGIGIPGD K+ FDQ+DSLACLE
Sbjct: 245 PLATTSSVVRGLTAFTSVTSGSLNLPGDTIFGLAKFFLGIGIPGDAKDLFDQIDSLACLE 304

Query: 124 NNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIEN 183
            NR SIPLILSLP+TV+SLTK+D LKV +NTVLGS APPLTV +V+AF S ++D SII +
Sbjct: 305 TNRFSIPLILSLPATVLSLTKEDKLKVSMNTVLGSAAPPLTVKIVKAFLSGSKDTSIISS 364

Query: 184 QELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIK 243
           QELKFDP   ++ LD  P +FDVG Y+FVF++++ DSE    YATG   QVPIY++G++K
Sbjct: 365 QELKFDPLSGLHILDAFPKTFDVGNYVFVFEVVLHDSEHMDKYATGGKIQVPIYISGVVK 424

Query: 244 IENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAF 303
           IENA+IAVLDSDLGSVETQKKLDL GES VS+SANHLQKLRL FQ++TP G+ FKPHQAF
Sbjct: 425 IENAEIAVLDSDLGSVETQKKLDLVGESVVSLSANHLQKLRLLFQLATPQGHGFKPHQAF 484

Query: 304 LRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRD 363
           L+LRHE+ VEH FV            DFLGLVEKFFYLSG+YDIQLTVGDAVMENS LR 
Sbjct: 485 LKLRHESGVEHIFV------------DFLGLVEKFFYLSGQYDIQLTVGDAVMENSFLRV 532

Query: 364 IGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTIL 423
           IG+++LDLPE PE A+RPP QPVD YTRYGPKAEI+HIFRAPEKRPP+ELSL FL LT L
Sbjct: 533 IGHIDLDLPEAPEKAARPPLQPVDLYTRYGPKAEISHIFRAPEKRPPKELSLTFLGLTFL 592

Query: 424 PLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLC 483
           P  GF++GLLRLGVNLKNFPTS VPATFA +FHL IAAV+LLY  FWLKLDLFTTLK + 
Sbjct: 593 PFLGFLVGLLRLGVNLKNFPTSTVPATFAFLFHLSIAAVILLYTFFWLKLDLFTTLKAVG 652

Query: 484 FLGVFLMVVGHRTLSHLASASAKLKSA 510
            LG+ L+ +GHRTLSHLAS SAKLKSA
Sbjct: 653 ILGILLVFLGHRTLSHLASTSAKLKSA 679




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505035|ref|XP_003521298.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] Back     alignment and taxonomy information
>gi|356572268|ref|XP_003554291.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] Back     alignment and taxonomy information
>gi|297744165|emb|CBI37135.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359480291|ref|XP_002272576.2| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356537059|ref|XP_003537048.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] Back     alignment and taxonomy information
>gi|224062133|ref|XP_002300771.1| predicted protein [Populus trichocarpa] gi|222842497|gb|EEE80044.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255577958|ref|XP_002529851.1| ribophorin II, putative [Ricinus communis] gi|223530679|gb|EEF32552.1| ribophorin II, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|22328844|ref|NP_193847.2| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|334186764|ref|NP_001190785.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|75163691|sp|Q93Z16.1|RPN2_ARATH RecName: Full=Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; AltName: Full=Protein HAPLESS 6; AltName: Full=Ribophorin II; Short=RPN-II; AltName: Full=Ribophorin-2; Flags: Precursor gi|16604454|gb|AAL24233.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gi|18958022|gb|AAL79584.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gi|332659008|gb|AEE84408.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|332659010|gb|AEE84410.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224085660|ref|XP_002307654.1| predicted protein [Populus trichocarpa] gi|222857103|gb|EEE94650.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query510
TAIR|locus:2127328691 HAP6 "HAPLESS 6" [Arabidopsis 0.962 0.710 0.580 4.3e-148
UNIPROTKB|P04844631 RPN2 "Dolichyl-diphosphooligos 0.786 0.635 0.250 8.5e-21
UNIPROTKB|F1PBH2562 RPN2 "Uncharacterized protein" 0.786 0.713 0.248 3e-20
UNIPROTKB|F1PCT7647 RPN2 "Uncharacterized protein" 0.786 0.619 0.248 6e-20
UNIPROTKB|Q3SZI6631 RPN2 "Dolichyl-diphosphooligos 0.786 0.635 0.245 3.7e-19
ZFIN|ZDB-GENE-030131-7928643 rpn2 "ribophorin II" [Danio re 0.798 0.632 0.238 6e-19
FB|FBgn0034277634 OstDelta "Oligosaccharide tran 0.774 0.623 0.242 9.9e-19
UNIPROTKB|E1C8Z0631 RPN2 "Dolichyl-diphosphooligos 0.645 0.521 0.261 3.9e-18
UNIPROTKB|F1NE20631 RPN2 "Dolichyl-diphosphooligos 0.645 0.521 0.261 3.9e-18
UNIPROTKB|E1BSQ3632 RPN2 "Dolichyl-diphosphooligos 0.645 0.520 0.261 4e-18
TAIR|locus:2127328 HAP6 "HAPLESS 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1446 (514.1 bits), Expect = 4.3e-148, P = 4.3e-148
 Identities = 286/493 (58%), Positives = 362/493 (73%)

Query:     4 SGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQG 63
             +G+A E L+GV+SLA SE D  +I +VK  I+KL DS++KYDDGTFYFDEK V+    QG
Sbjct:   187 AGLAYETLAGVISLAPSEFDPSLIQSVKTGILKLSDSIQKYDDGTFYFDEKSVDA--SQG 244

Query:    64 PLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLE 123
             P++TT+SV+RGLT+F++  +  LNL GDKI+G+AKFFLG+GIPGD K+FF+Q+D+LACLE
Sbjct:   245 PISTTASVIRGLTSFAASESTGLNLPGDKIVGLAKFFLGVGIPGDAKDFFNQIDALACLE 304

Query:   124 NNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIEN 183
             +N+ S+PLILSLPSTVISLTKK+ LKVKV+TVLGS AP L+V L +A SS + D+S+I N
Sbjct:   305 DNKFSVPLILSLPSTVISLTKKEPLKVKVSTVLGSKAPALSVKLTQALSSKSVDSSVINN 364

Query:   184 QELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIK 243
             QELKFD   A YFLD  P +FD+G+Y FVFK+++ +S  + VY T   T+VPI  TG I 
Sbjct:   365 QELKFDADSATYFLDSFPKNFDIGKYTFVFKIVLDESAHEKVYITEAQTKVPIAATGAIS 424

Query:   244 IENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAF 303
             IENA+IAVLDSD+GSVE+QKKLDL  +  VS+SANHLQKLRLSFQ++TPLGNAFKPHQAF
Sbjct:   425 IENAEIAVLDSDIGSVESQKKLDLTKDGAVSLSANHLQKLRLSFQLTTPLGNAFKPHQAF 484

Query:   304 LRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRD 363
              +L+HE++VEH F+V +SGKK E+ LDFLGLVEK +YLSG+Y+IQLT+GDA MENSLL +
Sbjct:   485 FKLKHESQVEHIFLVKTSGKKSELVLDFLGLVEKLYYLSGKYEIQLTIGDASMENSLLSN 544

Query:   364 IGYVELDLXXXXXXXXXXXXXXVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVXXXX 423
             IG++ELDL               +PY+RYGPKAEI+HIFR PEK P ++LSL FL     
Sbjct:   545 IGHIELDLPERPEKATRPPLQSTEPYSRYGPKAEISHIFRIPEKLPAKQLSLVFLGVIVL 604

Query:   424 XXXXXXXXXXXXXVNLKNFPTSAVPATFAVIFHLGIAAVXXXXXXXXXXXXXXXXXXXXX 483
                          VN+K+FP+S   A  A++FH GI AV                     
Sbjct:   605 PFIGFLIGLTRLGVNIKSFPSSTGSAISALLFHCGIGAVLLLYVLFWLKLDLFTTLKALS 664

Query:   484 XXGVFLMVVGHRT 496
               GVFL+ VGHRT
Sbjct:   665 LLGVFLLFVGHRT 677




GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA
GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISS
GO:0008250 "oligosaccharyltransferase complex" evidence=IEA
GO:0018279 "protein N-linked glycosylation via asparagine" evidence=IEA
GO:0009409 "response to cold" evidence=IEP
GO:0005739 "mitochondrion" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006364 "rRNA processing" evidence=RCA
GO:0030244 "cellulose biosynthetic process" evidence=RCA
UNIPROTKB|P04844 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PBH2 RPN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1PCT7 RPN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZI6 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-7928 rpn2 "ribophorin II" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0034277 OstDelta "Oligosaccharide transferase Delta subunit" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E1C8Z0 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NE20 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BSQ3 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q93Z16RPN2_ARATH2, ., 4, ., 9, 9, ., 1, 80.66460.99010.7308yesno
Q5N7W3RPN2_ORYSJ2, ., 4, ., 9, 9, ., 1, 80.62540.98820.7220yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.119LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query510
pfam05817636 pfam05817, Ribophorin_II, Oligosaccharyltransferas 1e-179
>gnl|CDD|218763 pfam05817, Ribophorin_II, Oligosaccharyltransferase subunit Ribophorin II Back     alignment and domain information
 Score =  518 bits (1337), Expect = e-179
 Identities = 184/503 (36%), Positives = 274/503 (54%), Gaps = 36/503 (7%)

Query: 5   GIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQGP 64
           G ALE  + +   A                  L D V++ +D     DE   +  + +G 
Sbjct: 167 GHALETAAELSQQAD-----------------LADIVDEIEDLVAQADELDGDYLQFEGG 209

Query: 65  LATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLEN 124
           L+TT+ VVRG    +  ++    +  ++I+ +A +FL        K+ F  +++LA L N
Sbjct: 210 LSTTALVVRGAYKLADHVSTEPPIKEEQIVKLANYFLSRKSVQSAKDAFSLLEALAVLSN 269

Query: 125 NRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQ 184
           N+  +P+++SLP    SL ++  LKVKV  VLG    P +V LV+A  S +   +++   
Sbjct: 270 NKFHVPVVVSLPGPAASLHEQPVLKVKVTNVLGKPLSPASVKLVQAVKSKSTKAAVLSKV 329

Query: 185 ELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKI 244
            L FD    V+ L+ + A    G Y FV ++   + + + +Y T  L    + V+G + I
Sbjct: 330 NLTFDLDGDVFELNFMSAKPASGYYTFVVEV---EGDHRYIYNTVELK---VKVSGKVSI 383

Query: 245 ENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQM-STPLGNAFKPHQAF 303
           +N +++V+D D  SV    K+D   ++ VS+SA+  QK  LSFQ+  TP G    PHQAF
Sbjct: 384 DNVELSVVDKDQSSVPKTTKVDYPKKAKVSLSADSHQKFVLSFQLVDTPSGKPLTPHQAF 443

Query: 304 LRLRH-ETKVEHTFVVG-SSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLL 361
           +RL + +TK E  FV    S K ++  LD     E F  LSG Y++ L VGDA +ENS L
Sbjct: 444 VRLHNQKTKQEIIFVAEPDSSKAYKFELDVGARKEDFGSLSGTYELYLIVGDATLENSFL 503

Query: 362 RDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLT 421
            ++  VEL  PE       P P  V+  + +GPK EI+H+FR PEKRPP  +S  F  L 
Sbjct: 504 WNVADVELKFPE------EPAPSTVEAKSLFGPKPEISHLFREPEKRPPTVVSNTFTALI 557

Query: 422 ILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKT 481
           +LPL   +I  ++LGVN+ NFP S      A++FHLG+ A+L LY +FWLKL++FTTLK 
Sbjct: 558 LLPLLLLLILWMKLGVNISNFPFS----PSAILFHLGLGAILGLYYVFWLKLNMFTTLKY 613

Query: 482 LCFLGVFLMVVGHRTLSHLASAS 504
           L  LGVF  + G+R LS +A   
Sbjct: 614 LAILGVFTFLAGNRMLSQIAVKR 636


This family contains eukaryotic Ribophorin II (RPN2) proteins. The mammalian oligosaccharyltransferase (OST) is a protein complex that effects the cotranslational N-glycosylation of newly synthesised polypeptides, and is composed of the following proteins: ribophorins I and II (RI and RII), OST48, and Dadl, N33/IAP, OST4, STT3. The family also includes the SWP1 protein from yeast. In yeast the oligosaccharyltransferase complex is composed 7 or 8 subunits, SWP1, being one of them. Length = 636

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 510
PF05817636 Ribophorin_II: Oligosaccharyltransferase subunit R 100.0
KOG2447287 consensus Oligosaccharyltransferase, delta subunit 100.0
>PF05817 Ribophorin_II: Oligosaccharyltransferase subunit Ribophorin II; InterPro: IPR008814 This family consists of several eukaryotic Ribophorin II (RPN2) proteins Back     alignment and domain information
Probab=100.00  E-value=3.2e-118  Score=981.16  Aligned_cols=468  Identities=37%  Similarity=0.604  Sum_probs=440.0

Q ss_pred             hhhhHHHhccceecccccchHHHHHHhhcchhhhhhccccccccccccccceeecccccCCcchhhhhhhhhhhcccccc
Q 010453            4 SGIALEALSGVVSLASSEIDQFMIGAVKNDIVKLFDSVEKYDDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVIT   83 (510)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~~~v~~~~~eggLs~Ta~~v~g~~~la~~~~   83 (510)
                      +|.|+++++.+...+              |+.+++|+|||.+.+++|+|++|+|   |||||++||++|+|+|+|++++|
T Consensus       166 ~g~al~~aa~L~~~a--------------~l~~~~~~ieD~v~qaDEv~~~~Lq---FeggLs~TA~vv~g~~~la~~~~  228 (636)
T PF05817_consen  166 LGYALHAAAQLSKQA--------------DLADIVERIEDAVAQADEVDGKYLQ---FEGGLSTTALVVRGIYKLADAVG  228 (636)
T ss_pred             HHHHHHHHHhhccch--------------hhhHHHHHHHHHHHhhhhhccccee---ecCCchhhHHHHHHHHHHHHhhC
Confidence            588888888776533              4888899999999999999999999   89999999999999999999999


Q ss_pred             CCCCCChhHHHHHhhhhhccCCCCChhhHHHHHHHHHhhhcCCeeeceEEEccCceeccccCCceEEEEEeccCCCCCCc
Q 010453           84 ESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPL  163 (510)
Q Consensus        84 ~~p~i~~dQi~~~anyllsr~~v~s~k~a~~l~~al~~l~~N~~~~P~~~~l~~~~~~~~~~~~l~v~Vtdvlg~~l~~~  163 (510)
                      |+|+|++||++||||||||||++|++||||++++||++|++|++++|+|++++++.++.+++|.|+|+|+|+||+|++++
T Consensus       229 k~~~i~~dQivklanylLsrr~v~s~k~a~~l~~al~~L~~N~~~~Pv~i~l~~~~~~~~~~~~l~v~Vt~vlG~~~~~~  308 (636)
T PF05817_consen  229 KKPPIKEDQIVKLANYLLSRRSVQSPKDAFNLLEALKSLSSNKFHVPVVISLESSASLSSSKPSLKVRVTNVLGQPLPPL  308 (636)
T ss_pred             CCCCCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhhCCccccEEEEeCCCcccccCCCcEEEEEEeccCCcCCcc
Confidence            99999999999999999999999999999999999999999999999999999999988899999999999999999999


Q ss_pred             eEEEEEeEeecCCCceEEeccccccCCCCceEEecCCCCCCCceeEEEEEEEeecccccceeeeecceeEEEEEEEEEEE
Q 010453          164 TVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIK  243 (510)
Q Consensus       164 ~V~~~~~~~~~~~~~~v~~~~~l~~~~~~~~y~l~~~~~k~~~G~Y~~~~~v~~~d~~~~~~~~~~~~~~~~v~V~~~v~  243 (510)
                      +|++++++++.+++++++++++|+++++++.|++|+++.|+++|+|++++++ .    ++.++++ .+.+++|+|+++|+
T Consensus       309 ~v~~~~a~~s~~~~~~vls~~~l~~~~~~~~~~l~~~~~k~~~G~Y~~~~~~-~----~~~~~~~-~~~~~~vkV~~~v~  382 (636)
T PF05817_consen  309 SVKLVSAISSSSDDSVVLSNKPLTFDSDKTVYELDLMSLKPARGYYKFSFSV-S----GDKRLIG-NTAQLQVKVLGEVS  382 (636)
T ss_pred             hhhhhhhhhccCCcceeeccccceecCCCCeEEEecccCCCCCceEEEEEEe-c----Cccceee-eEEEEEEEEEEEEE
Confidence            9999999888888889999999998888899999999999999999999988 2    2235554 34899999999999


Q ss_pred             EEeeEEEEeeCCCCccceeeeeecCCCcceeeecCCcceEEEEEEEEc-CCCCCCCceeEEEEEEe-CCceEEEEEec-c
Q 010453          244 IENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMST-PLGNAFKPHQAFLRLRH-ETKVEHTFVVG-S  320 (510)
Q Consensus       244 v~~~~v~v~d~d~~~~~~~~~l~~~~kl~~~L~ad~~~~L~l~F~l~~-~~g~~~~PhQafL~L~~-~tg~e~~fv~k-~  320 (510)
                      |++++++|.|+|+++.++++++++++++..+|++|++|+++++|+|++ ++|++++||||||||+| ++|+|++|+++ +
T Consensus       383 v~~~~v~v~d~d~~~~~~~~~v~~~~k~~~~l~ad~~~~l~l~f~l~~~~~g~~~~phQafl~l~~~~t~~e~~f~~~~~  462 (636)
T PF05817_consen  383 VENAEVSVADSDQSSAPKKTSVDYPSKLSSSLSADSHQKLKLKFSLTDKSDGKPKRPHQAFLRLTHQETGLEIIFPAEVD  462 (636)
T ss_pred             EeEEEEEeecCCCCcCcceeeecccccccCCccCCCCceEEEEEEEEEcCCCCccceeEEEEEEEeCCCCceEEEeeecC
Confidence            999999999999999999999999999999999999999999999965 78899999999999999 99999999985 5


Q ss_pred             CCceEEEEeccccchhhhhccCccEEEEEEEecccccCCccccceeEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCceee
Q 010453          321 SGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITH  400 (510)
Q Consensus       321 s~k~yk~~ld~~~l~~~f~~~Sg~y~v~LIVGD~~~~~p~~~~l~~v~L~f~~~~~~~~~~p~~~~e~~~ry~pkPEI~H  400 (510)
                      ++++|++++|+++++++|.+.||+|+++|||||+.++||+.|++|+++|++++.      +++.+++++.||+|||||||
T Consensus       463 ~~~~~k~~l~~~~~~~~f~~~sg~y~~~LiiGd~~~~~~~~~~l~~i~l~~~~~------~~~~~~~~~~ry~~kpEI~H  536 (636)
T PF05817_consen  463 SSGKYKFELDLKDLPKQFLYLSGPYSLSLIIGDASISNPLNWNLGDISLKFPED------APPPKYEKPVRYGPKPEIHH  536 (636)
T ss_pred             CCceEEEEEeccccchhhhhcCCceeEEEEEecCCcCCceeeeeeEEEEecCCc------CCCCCccccccCCCCCceee
Confidence            567899999999999999999999999999999999999999999999999873      12245667799999999999


Q ss_pred             ecCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhccChHHHHH
Q 010453          401 IFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLK  480 (510)
Q Consensus       401 iFR~peKrPP~iVS~~Ft~lvlapll~Lli~W~~lG~Nl~n~p~s~~~~~~~i~F~~sL~gie~Lf~~YWl~lnmFqTL~  480 (510)
                      +||+||||||++||++|+++|++||++||++|.++|+|++|+|+++    ++++||+||+|||++|++||++|||||||+
T Consensus       537 ~Fr~~eK~pp~~vS~~F~~~vlapl~~Ll~~W~~lG~Nl~~l~~~~----~~~~F~~~l~ai~glf~~Yw~~l~lFqTL~  612 (636)
T PF05817_consen  537 IFREPEKRPPKIVSLVFTGLVLAPLLVLLILWLKLGANLSNLPFSP----SAILFHGGLGAIEGLFFLYWLGLNLFQTLP  612 (636)
T ss_pred             ecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHcCcchhhCCCCc----hHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence            9999999999999999999999999999999999999999999998    499999999999999999999999999999


Q ss_pred             HHHHhhHhhhhhhhHHHHHHHHHh
Q 010453          481 TLCFLGVFLMVVGHRTLSHLASAS  504 (510)
Q Consensus       481 yl~~Lg~~t~l~G~raLr~la~~r  504 (510)
                      |+++||+|||++|+|+||++++||
T Consensus       613 ~~~~lg~~t~~~G~r~L~~~a~~r  636 (636)
T PF05817_consen  613 YLAVLGAVTFLSGNRALRELAERR  636 (636)
T ss_pred             HHHHHHHHHHHHhHHHHHHHhhcC
Confidence            999999999999999999999998



The mammalian oligosaccharyltransferase (OST) is a protein complex that effects the cotranslational N-glycosylation of newly synthesised polypeptides, and is composed of at least four rough ER-specific membrane proteins: ribophorins I and II (RI and RII), OST48, and Dadl. The mechanism(s) by which the subunits of this complex are retained in the ER are not well understood [].; GO: 0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity, 0018279 protein N-linked glycosylation via asparagine, 0005789 endoplasmic reticulum membrane, 0008250 oligosaccharyltransferase complex

>KOG2447 consensus Oligosaccharyltransferase, delta subunit (ribophorin II) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query510
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 54.9 bits (131), Expect = 5e-08
 Identities = 45/285 (15%), Positives = 91/285 (31%), Gaps = 68/285 (23%)

Query: 182 ENQELKFDPQDAVY-FLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTG 240
           E  E ++  +D +  F D    +FD  +   + K ++   E   +  +       + +  
Sbjct: 10  ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69

Query: 241 LIKIENAKIA------VLDSDLG----SVETQKKLDLAGESTVSVSANHLQKLRLSFQMS 290
            +  +  ++       VL  +       ++T+++   +  + + +      +L    Q+ 
Sbjct: 70  TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR-QPSMMTRMYIE--QRDRLYNDNQVF 126

Query: 291 TPLG-NAFKPH----QAFLRLRHETKVEHTFVVG--SSGK-----------KFEITLDFL 332
                +  +P+    QA L LR    V    + G   SGK           K +  +DF 
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNV---LIDGVLGSGKTWVALDVCLSYKVQCKMDF- 182

Query: 333 GLVEKFFYLS-GRYDIQLTVGDAVME--NSLLRDIGYVELDLPEPPENASRPPPQPVDPY 389
               K F+L+    +      + V+E    LL  I        +   N        +   
Sbjct: 183 ----KIFWLNLKNCNSP----ETVLEMLQKLLYQIDPNWTSRSDHSSN----IKLRIHSI 230

Query: 390 TRYGPKAEITHIFRAPEKRPPQELSLAFLVL------TILPLFGF 428
                +AE+  + +   K     L    LVL           F  
Sbjct: 231 -----QAELRRLLK--SKPYENCL----LVLLNVQNAKAWNAFNL 264


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00