Citrus Sinensis ID: 010906

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------
Protein Sequence
MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPKAEKSNNNSCLQALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENGHISAKRQRIECS
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHcccccccccccHHHHHHHHHcccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccEEEccccccccccccccccccccccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEEcccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccEEEEEccccccccccHccHHHHHccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccHHHHHHHcHHHHHHHHHHHccccccEEEEccccccccccccccccEEccccccccccccccccEEEcccccccccccccEEEcc
Coil and Loop (DISEMBL)
mefvklgnggkfHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLegkgisddktgsadenseshsrASIELSLRKSYYILskipsmednneksehemwsgsgssseegnlkeaskksktkvkmpkaeksnnnSCLQALSAAIISKKMKSKFTKAWITFLrlplpvdiYKEVLVTLHRAvipflsnpimlcdfltrsydiggVVSVMALSSLFILMTqhgleypnFYEKLYALLVPSIFMAKHRAKFFELLDsclrspllPAYLAAAFVKKLSRlsilvppsgALVIMALIHNLLrrhpsincllhredgnethnddskAEKEIVDAATVanissikpgidhfddeesnpvksnamrSSLWEIdtlrhhycppvsrFVLSLENDltvraktteinvkdfcsgsyatIFGEEIRRRVKQVPlafykttptslfsdsdfagwtficdkteensngnkeknFACLseenghisaKRQRIECS
Flexible Loop (DISEMBL)
mefvklgngGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDktgsadenseshsrasielslrKSYYILSKIPSMEDNNEKSEHEMwsgsgssseegnlkeaskksktkvkmpkaeksnnnscLQALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAnissikpgidhfddeesnpVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAktteinvkdfcsgsyATIFGEEIRRRVKQVPLAFYKttptslfsdsdfAGWTFICDKteensngnkEKNFaclseenghisakrqriecs
Low Complexity Region (SEG)
MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKsehemwsgsgssseegNLkeaskksktkvkmpkAEKSNNNSCLQALsaaiiskkmkskFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENGHISAKRQRIECS
Disordered region (IsUnstruct)
****KLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKL***********************************SYYIL******************************************************LQALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLH*****************************************************LWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICD**********************************
Disordered Region (DISOPRED)
*EF*K**NGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARS****************NSESHSRASIELSLRKSYYILSKI************************************************************SKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGN*****************************DHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLEND*********INVKDFCSGSYATIFGEEIRRRVKQ*******************AGWTFI************************************
Disordered Region (DISEMBL)
MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGK********************SIELSLRKSYYILSKIPSM*********************************************NSCLQALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG*********AEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENG************
Disordered Region (DISPRO)
*EFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLE********************RASIELSLRKSYYILSKIPSMED*N*******W************************************LQALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHRED***************************KPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICD**********************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPKAEKSNNNSCLQALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENGHISAKRQRIECS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	497	2.2.26 [Sep-21-2011]
Q8BHY2	516	Nucleolar complex protein	yes	no	0.501	0.482	0.401	2e-55
Q5I0I8	516	Nucleolar complex protein	yes	no	0.501	0.482	0.397	3e-55
Q5ZJC7	508	Nucleolar complex protein	yes	no	0.496	0.486	0.396	3e-55
Q6NU91	525	Nucleolar complex protein	N/A	no	0.501	0.474	0.392	1e-52
Q4VBT2	525	Nucleolar complex protein	yes	no	0.563	0.533	0.364	1e-52
Q6NRQ2	526	Nucleolar complex protein	N/A	no	0.414	0.391	0.441	1e-50
Q9BVI4	516	Nucleolar complex protein	yes	no	0.501	0.482	0.394	4e-48
Q06512	552	Nucleolar complex protein	yes	no	0.575	0.518	0.355	4e-47
O94372	485	Uncharacterized protein C	yes	no	0.507	0.519	0.380	4e-47
P41843	504	Uncharacterized protein T	yes	no	0.410	0.404	0.283	1e-24

>sp|Q8BHY2|NOC4L_MOUSE Nucleolar complex protein 4 homolog OS=Mus musculus GN=Noc4l PE=2 SV=1

 Score =  217 bits (552), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 112/279 (40%), Positives = 170/279 (60%), Gaps = 30/279 (10%)

Query: 164 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 223
           K+ K  F + W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S
Sbjct: 246 KEHKKAFQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAIS 305

Query: 224 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 283
           ++AL+ LFIL+ +H LEYP+FY+KLY LL PSIF  K+RA+FF L D  L S  LPAYL 
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYQKLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLV 365

Query: 284 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 343
           AAF K+L+RL++  PP   L+++ LI NLLRRHP+   ++HR  G E            +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPE------------L 413

Query: 344 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 403
           DA             D +D  E +P +S A+ S LWE+ TL+ HY P VS+    +   L
Sbjct: 414 DA-------------DPYDPTEKDPARSRALESCLWELQTLQQHYHPEVSKAASVINQVL 460

Query: 404 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAF 441
           +V     E+++      +   IF +++++++ + VPL F
Sbjct: 461 SV----PEVSIAPLLELTAYEIFEQDLKKKMPESVPLEF 495

Mus musculus (taxid: 10090)

>sp|Q5I0I8|NOC4L_RAT Nucleolar complex protein 4 homolog OS=Rattus norvegicus GN=Noc4l PE=2 SV=1

 Score =  216 bits (550), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 111/279 (39%), Positives = 169/279 (60%), Gaps = 30/279 (10%)

Query: 164 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 223
           K+ +  F + W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S
Sbjct: 246 KEQRKAFQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAIS 305

Query: 224 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 283
           ++AL+ LFIL+ +H LEYP+FY++LY LL PSIF  K+RA+FF L D  L S  LPAYL 
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYQRLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLV 365

Query: 284 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 343
           AAF K+L+RL++  PP   L+++ LI NLLRRHP+   ++HR  G E            +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPE------------L 413

Query: 344 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 403
           DA             D +D  E +P +S A+ S LWE+ TL+ HY P VSR    +   L
Sbjct: 414 DA-------------DPYDPTEKDPARSRALESCLWELQTLQQHYHPEVSRAASVINQAL 460

Query: 404 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAF 441
           +V     E+++      +   IF +++++ + + VPL F
Sbjct: 461 SV----PEVSIAPLLELTAYEIFEQDLKKMMPESVPLEF 495

Rattus norvegicus (taxid: 10116)

>sp|Q5ZJC7|NOC4L_CHICK Nucleolar complex protein 4 homolog OS=Gallus gallus GN=NOC4L PE=2 SV=1

 Score =  216 bits (550), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/275 (39%), Positives = 166/275 (60%), Gaps = 28/275 (10%)

Query: 167 KSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMA 226
           K  F + W+TFL+  LP  +YK+VLV LH +++P+++ P ++ DFLT +Y +GG +S++A
Sbjct: 241 KQAFERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAISLLA 300

Query: 227 LSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAF 286
           L+ LFIL+ QH LEYP+FY+KLY+LL PSI+  K+RA+FF L D  L S  LPAYL AAF
Sbjct: 301 LNGLFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLVAAF 360

Query: 287 VKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAA 346
           +K+LSRL++  PP   L+++  I NL RRHP+   L+HR +G +  ++D           
Sbjct: 361 IKRLSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSEDP---------- 410

Query: 347 TVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVR 406
                         +  E+  P +S A+ SSLWE+ +L++HY P V++    L   L+  
Sbjct: 411 --------------YIMEQEEPSESRALESSLWELQSLQNHYHPDVAQAAAILNQSLS-- 454

Query: 407 AKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF 441
               E ++      S + +F +EI++    VPL F
Sbjct: 455 --EIEDDISGLLELSASELFDKEIKKTSANVPLEF 487

Gallus gallus (taxid: 9031)

>sp|Q6NU91|NOC4B_XENLA Nucleolar complex protein 4 homolog B OS=Xenopus laevis GN=noc4l-b PE=2 SV=1

 Score =  208 bits (529), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 109/278 (39%), Positives = 162/278 (58%), Gaps = 29/278 (10%)

Query: 164 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 223
           K+ K  F + W++FL+  L V +YK+VL+ LH +++P +S P ++ DFLT +YD+GG +S
Sbjct: 257 KEQKRVFERVWMSFLKHQLSVSLYKKVLLILHESILPHMSKPSLMIDFLTAAYDVGGAIS 316

Query: 224 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 283
           ++AL+ LFIL+ QH LEYP+FY+KLY+LL PS+F  K+RA+FF L +  L S  LP YL 
Sbjct: 317 LLALNGLFILIHQHNLEYPDFYKKLYSLLEPSVFHVKYRARFFHLANLFLSSTHLPVYLV 376

Query: 284 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 343
           AAF K+L+RL++  PP   L+I+  I NL+RRHP+   L+HR                  
Sbjct: 377 AAFAKRLARLALTAPPQVLLMIIPFICNLIRRHPACRVLIHRPSAG-------------- 422

Query: 344 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 403
           D  T           D +  EE +P KS A+ S LWE++ L+ HY   V R      N +
Sbjct: 423 DLVT-----------DPYIMEEQDPAKSQALESCLWELEVLQQHYHGDVVRAA----NVI 467

Query: 404 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF 441
           +      E +V      S   +F +E++++ K VPL +
Sbjct: 468 SRALSAQESDVSGLLEMSSCELFDKEMKKKFKSVPLEY 505

Xenopus laevis (taxid: 8355)

>sp|Q4VBT2|NOC4L_DANRE Nucleolar complex protein 4 homolog OS=Danio rerio GN=noc4l PE=2 SV=1

 Score =  207 bits (527), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 114/313 (36%), Positives = 174/313 (55%), Gaps = 33/313 (10%)

Query: 138 TKVKMPKAEKSNNNSCLQALSA-----AIISKKMKSKFTKAWITFLRLPLPVDIYKEVLV 192
           T + +P       N  +Q  S      A   K+ K  F + W+ FLR  LP  +YK++LV
Sbjct: 224 TTINIPNQASEMTNFLVQQQSKHDDWKAAKLKEHKRAFEQMWLLFLRYKLPGSMYKKILV 283

Query: 193 TLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALL 252
            LH +++P +S+P ++ DFL+ +YDIGG +S+ AL+ LF+ + +H L+YP+FY+KLY LL
Sbjct: 284 ILHESILPQMSDPKLMMDFLSAAYDIGGAISLSALNGLFVPIHEHNLDYPDFYKKLYNLL 343

Query: 253 VPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNL 312
            PSIF  K+RA+FF L +  L S  LP YL AAFVK+L+RLS+  PP+  L+++  I NL
Sbjct: 344 DPSIFHVKYRARFFHLANIFLSSTHLPVYLVAAFVKRLARLSLTAPPTALLILLPFICNL 403

Query: 313 LRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSN 372
           +RRHPS   L+HR    +                        +P  D +  EE +P + +
Sbjct: 404 IRRHPSCRVLIHRPSAAD------------------------EPCDDPYVMEEEDPAQCH 439

Query: 373 AMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRR 432
           A+ SSLWEI TL++H+ P VS+    +   L+ +    E ++ +    +   +   E++ 
Sbjct: 440 ALESSLWEIKTLQNHHHPDVSKAATMINEPLSAQ----EEDISELLELTTFELMERELKG 495

Query: 433 RVKQVPLAFYKTT 445
             K VPL F   T
Sbjct: 496 EKKTVPLEFDMAT 508

Danio rerio (taxid: 7955)

>sp|Q6NRQ2|NOC41_XENLA Nucleolar complex protein 4 homolog A OS=Xenopus laevis GN=noc4l-a PE=2 SV=1

 Score =  201 bits (511), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 102/231 (44%), Positives = 142/231 (61%), Gaps = 25/231 (10%)

Query: 164 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 223
           K  K  F + W+ FL+  L V +YK+VL+ LH +++P +S P ++ DFLT +YD+GG +S
Sbjct: 257 KDHKRVFERVWMIFLKHQLSVSLYKKVLLILHESILPHMSKPTLMIDFLTAAYDVGGAIS 316

Query: 224 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 283
           ++AL+ LFIL+ QH LEYP+FY+KLY+LL PSIF  K+RA+FF L +  L S  LP YL 
Sbjct: 317 LLALNGLFILIHQHNLEYPDFYKKLYSLLEPSIFHVKYRARFFHLANMFLSSTHLPVYLV 376

Query: 284 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 343
           AAF K+L+RL++  PP   L+I+  I NL+RRHP+   L+HR                  
Sbjct: 377 AAFAKRLARLALTAPPQVLLMIIPFICNLIRRHPACRVLIHRPSAG-------------- 422

Query: 344 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSR 394
           D AT           D +  EE +P KS A+ SSLWE++ L+ HY   V R
Sbjct: 423 DLAT-----------DPYIMEEQDPAKSQALESSLWELEVLQQHYHGDVVR 462

Xenopus laevis (taxid: 8355)

>sp|Q9BVI4|NOC4L_HUMAN Nucleolar complex protein 4 homolog OS=Homo sapiens GN=NOC4L PE=1 SV=1

 Score =  192 bits (489), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/279 (39%), Positives = 167/279 (59%), Gaps = 30/279 (10%)

Query: 164 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 223
           K+ +  F   W++FL+  LP+ +YK+VL+ +H A++P L+ P ++ DFLTR+ D+GG +S
Sbjct: 246 KEHRRVFQAMWLSFLKHKLPLSLYKKVLLIVHDAILPQLAQPTLMIDFLTRACDLGGALS 305

Query: 224 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 283
           ++AL+ LFIL+ +H LEYP+FY KLY LL PS+F  K+RA+FF L D  L S  LPAYL 
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYRKLYGLLDPSVFHVKYRARFFHLADLFLSSSHLPAYLV 365

Query: 284 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 343
           AAF K+L+RL++  PP   L+++  I NLLRRHP+   L+HR  G E            +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPFICNLLRRHPACRVLVHRPHGPE------------L 413

Query: 344 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 403
           DA             D +D  E +P +S A+ SSLWE+  L+ HY P VS+    +   L
Sbjct: 414 DA-------------DPYDPGEEDPAQSRALESSLWELQALQRHYHPEVSKAASVINQAL 460

Query: 404 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAF 441
           ++     E+++      +   IF  +++++  + VPL F
Sbjct: 461 SM----PEVSIAPLLELTAYEIFERDLKKKGPEPVPLEF 495

Homo sapiens (taxid: 9606)

>sp|Q06512|NOC4_YEAST Nucleolar complex protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOC4 PE=1 SV=1

 Score =  189 bits (480), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 175/315 (55%), Gaps = 29/315 (9%)

Query: 165 KMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDI------ 218
           K KS F K W++ L   L +  YK +L+ LH+ +IP    P  L DFLT SY++      
Sbjct: 252 KFKSNFEKNWLSLLNGQLSLQQYKSILLILHKRIIPHFHTPTKLMDFLTDSYNLQSSNKN 311

Query: 219 GGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLL 278
            GVV ++AL+ LF LM +  LEYPNFY KLY ++ P +   K+RA+FF L+D  L S  L
Sbjct: 312 AGVVPILALNGLFELMKRFNLEYPNFYMKLYQIINPDLMHVKYRARFFRLMDVFLSSTHL 371

Query: 279 PAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKA 338
            A+L A+F+KKL+RL++  PPS  + ++  I+NL+R+HP  NC++   +     N     
Sbjct: 372 SAHLVASFIKKLARLTLESPPSAIVTVIPFIYNLIRKHP--NCMIMLHNPAFISNPFQTP 429

Query: 339 EKEIVDAATVANISSIKPG-IDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVL 397
           ++       VAN+ ++K   +D FD  ES+P  ++A+ SSLWE+ +L  HY P V+    
Sbjct: 430 DQ-------VANLKTLKENYVDPFDVHESDPELTHALDSSLWELASLMEHYHPNVA---- 478

Query: 398 SLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAG 457
           +L        K    N++DF   +Y ++   E  R++K +P   ++   T++F + D   
Sbjct: 479 TLAKIFAQPFKKLSYNMEDFLDWNYDSLLNAESSRKLKTLPTLEFEAF-TNVFDNED--- 534

Query: 458 WTFICDKTEENSNGN 472
                  +E +S GN
Sbjct: 535 -----GDSEASSQGN 544

Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. Has a role in the nuclear export of 40S pre-ribosomal subunit to the cytoplasm.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O94372|YG06_SCHPO Uncharacterized protein C1604.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1604.06c PE=3 SV=1

 Score =  189 bits (480), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/284 (38%), Positives = 165/284 (58%), Gaps = 32/284 (11%)

Query: 166 MKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVM 225
           +K  F ++W++ L LPL V++YK+VL  +H+ VIPFL  P +L DFLT +Y+    VS++
Sbjct: 226 IKRAFQESWLSALSLPLSVNLYKQVLNVIHKRVIPFLQKPNLLMDFLTDAYNSHHAVSLL 285

Query: 226 ALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAA 285
           AL+ LF LM  H L+YP FY KLYALL  ++   K R++FF LLD  L S  LPA L A+
Sbjct: 286 ALNGLFTLMISHNLDYPLFYPKLYALLDRNLLYLKTRSRFFRLLDLFLSSTHLPATLIAS 345

Query: 286 FVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDA 345
           F+K+L+RL++  PP    +++  I+N L+RHP+   +LHR                    
Sbjct: 346 FIKRLARLALTAPPGAIAIVIPFIYNCLQRHPTCMQMLHR-------------------- 385

Query: 346 ATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTV 405
                 SS + G D FD ++ +P+ + A+ SSLWE+ TL++HY   ++    SL + ++ 
Sbjct: 386 ------SSAESG-DSFDFDQPDPLLTGAIESSLWELSTLQNHYYSNIA----SLASIMSQ 434

Query: 406 RAKTTEINVKDFCSGSYATIFGEEIRRRVK-QVPLAFYKTTPTS 448
           +       ++DF    YAT+   E+RR +K + P+ F K T  S
Sbjct: 435 KFTKPRYELEDFLDHGYATMCDAELRRPLKNEPPIEFEKRTLAS 478

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P41843|YO93_CAEEL Uncharacterized protein T20B12.3 OS=Caenorhabditis elegans GN=T20B12.3 PE=3 SV=1

 Score =  114 bits (286), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 114/229 (49%), Gaps = 25/229 (10%)

Query: 166 MKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVM 225
           + + +   W+  +   +   +  +++  + + VI  L  P    DF  + +D      ++
Sbjct: 190 ISTDYDNVWMAVMNGKISDKLTLKLIPYITQNVISKLKAPFKSADFFFKMFDKTDYHGIL 249

Query: 226 ALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAA 285
           +L ++F L+++H  EYP FY+K+Y+L  PS+     +     LLDS L S  LP Y+ A+
Sbjct: 250 SLGAIFRLISEHNFEYPKFYDKVYSLTNPSLLYMSQKESILTLLDSFLSSTHLPTYITAS 309

Query: 286 FVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDA 345
           F+K+LSR  +L P      I+ LI NL+ RHP+ + L+HRE     ++            
Sbjct: 310 FLKRLSRCLLLAPIDAQEPILGLIRNLVIRHPNCSELVHREVPQTLYD------------ 357

Query: 346 ATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSR 394
                        D FD++E++  K+ A+ SSLWE+  L+ H+   V +
Sbjct: 358 -------------DPFDNDETDLHKTRALESSLWEMKLLQCHWNQSVRK 393

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	497
224104817	575	predicted protein [Populus trichocarpa]	0.897	0.775	0.701	0.0
255580614	652	nucleolar complex protein, putative [Ric	0.953	0.726	0.648	0.0
357492085	607	Nucleolar complex protein-like protein [	0.949	0.777	0.638	1e-179
356553291	600	PREDICTED: nucleolar complex protein 4 h	0.935	0.775	0.651	1e-179
356501033	581	PREDICTED: nucleolar complex protein 4 h	0.913	0.781	0.656	1e-173
449500195	608	PREDICTED: nucleolar complex protein 4 h	0.941	0.769	0.595	1e-171
297832324	582	hypothetical protein ARALYDRAFT_480608 [	0.901	0.769	0.635	1e-168
22325731	577	CCAAT-binding factor [Arabidopsis thalia	0.901	0.776	0.635	1e-168
18086412	577	At2g17250/T23A1.11 [Arabidopsis thaliana	0.901	0.776	0.633	1e-167
449454418	576	PREDICTED: nucleolar complex protein 4 h	0.873	0.753	0.571	1e-156

>gi|224104817|ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|222849985|gb|EEE87532.1| predicted protein [Populus trichocarpa]

 Score =  659 bits (1699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/462 (70%), Positives = 385/462 (83%), Gaps = 16/462 (3%)

Query: 1   MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLA 60
           MEFVK GNGG+F+SAIYH+ L +IV STES+  V + LASKYFKYID+RYFTYI++EK A
Sbjct: 123 MEFVKTGNGGRFNSAIYHRFLVNIVQSTESLDFVLELLASKYFKYIDIRYFTYINIEKFA 182

Query: 61  RSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGS 120
           ++LE K ISD KT S D+  ES SR S+ELS+ K +YI+S IP +ED  + S++E+W GS
Sbjct: 183 KNLELKDISDGKTESGDKVGESDSRESLELSIYKIHYIISNIPPLEDPKQNSDYELWGGS 242

Query: 121 GSSSEEGNLKEASKKSKTKVKMPKAEKSNNNSCLQALSAAIISKKMKSKFTKAWITFLRL 180
           G           S+  KT+ K  K+EK +N+     LSA   +KKMK KFTKAWI+FLRL
Sbjct: 243 G----------PSQHLKTEDKDLKSEKHDND----VLSAGNYAKKMKLKFTKAWISFLRL 288

Query: 181 PLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLE 240
           PLP+D+YKEVL  LH+AVIP LSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMT+HGLE
Sbjct: 289 PLPIDVYKEVLSNLHQAVIPHLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTKHGLE 348

Query: 241 YPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPS 300
           YPNFYEKLY LL+PSIFMAKHRAKFF+LLDSCL+SPLLPAYLAAAF KKLSRL+++VPPS
Sbjct: 349 YPNFYEKLYVLLLPSIFMAKHRAKFFQLLDSCLKSPLLPAYLAAAFAKKLSRLALVVPPS 408

Query: 301 GALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAE--KEIVDAATVANISSIKPGI 358
           GALVI+ALIHNLLRRHPSINCL+H+ED N+T +++S+AE      +     NI++ K GI
Sbjct: 409 GALVIIALIHNLLRRHPSINCLVHQEDCNDTTDNNSEAEGGDNENEFGASTNIAARKAGI 468

Query: 359 DHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFC 418
           DHFD+EESNP+KS+A+ SSLWEID+LRHHYCPPVSRFV SLENDLTVRAKTTE+NV+DF 
Sbjct: 469 DHFDNEESNPLKSHALGSSLWEIDSLRHHYCPPVSRFVQSLENDLTVRAKTTEVNVEDFS 528

Query: 419 SGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTF 460
           SGSYATIFGEEIRRRVKQVP+AFYK  PTSLFS++DF+GW+F
Sbjct: 529 SGSYATIFGEEIRRRVKQVPVAFYKAIPTSLFSETDFSGWSF 570

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580614|ref|XP_002531130.1| nucleolar complex protein, putative [Ricinus communis] gi|223529279|gb|EEF31250.1| nucleolar complex protein, putative [Ricinus communis]

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/506 (64%), Positives = 398/506 (78%), Gaps = 32/506 (6%)

Query: 1   MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLA 60
           MEFVKLGNGG+F+SAIYH+LL+++V S   V  V + LASKYF YID+ YFTYIS++KLA
Sbjct: 170 MEFVKLGNGGRFNSAIYHRLLYNLVQSATPVDFVLELLASKYFNYIDICYFTYISLDKLA 229

Query: 61  RSLEGKGISDDKTGSA-DENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSG 119
           +++      D+K  SA + +  SH RAS++LS+ K +YILS IP++ED  E S+++MWSG
Sbjct: 230 KTMGENDSPDNKAKSAANGDDASHPRASMDLSIHKIHYILSCIPTVEDPKENSDNKMWSG 289

Query: 120 SGSSSEEGNLKEASKKSKTKVKMPKAEKSNNNSCLQALSAAIISKKMKSKFTKAWITFLR 179
               +   ++        T + M           +Q LSAA ISKKMK KFTKAWI+FLR
Sbjct: 290 LVVFNLYSSVL-------TLLCM---------QSIQVLSAASISKKMKLKFTKAWISFLR 333

Query: 180 LPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGL 239
           LPLPV++YKEVL++LH+AVIP++SNP+MLCDFLTRSYDIGGVVSVMALSSLFILMTQHGL
Sbjct: 334 LPLPVNVYKEVLISLHQAVIPYISNPLMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGL 393

Query: 240 EYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPP 299
           EYPNFYEKLYALL+PS+FMAKHR+KFF+LLDSCL+SPLLPAYLAAAF K+LSRL++  PP
Sbjct: 394 EYPNFYEKLYALLLPSVFMAKHRSKFFQLLDSCLKSPLLPAYLAAAFAKRLSRLALTAPP 453

Query: 300 SGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN------ISS 353
           SG +VI+ALIHNLLRRHPSINCL+HREDGNE+  D+SKA+ E  DA    N       S+
Sbjct: 454 SGGVVIIALIHNLLRRHPSINCLVHREDGNESAADNSKAKGE--DAGDANNSRNGSHASA 511

Query: 354 IKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEIN 413
            KPGID F++EE +P+KS+A+RSSLWEIDTL HHYCPPVSRFVLSLENDLTVR KTTE+N
Sbjct: 512 RKPGIDRFNNEECSPIKSSALRSSLWEIDTLSHHYCPPVSRFVLSLENDLTVRKKTTEVN 571

Query: 414 VKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENS--NG 471
           + DF S SYATIF EE+RRRVKQVPLAF+K TPTSLFS+SDFAGWTF  ++++ N   NG
Sbjct: 572 INDFSSSSYATIFEEELRRRVKQVPLAFFKATPTSLFSESDFAGWTFKYEQSKRNDAVNG 631

Query: 472 NKEKNFACLSEENGHISAKRQRIECS 497
             +K     SEEN     KRQRIECS
Sbjct: 632 TSDK-----SEENDCSPTKRQRIECS 652

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357492085|ref|XP_003616331.1| Nucleolar complex protein-like protein [Medicago truncatula] gi|355517666|gb|AES99289.1| Nucleolar complex protein-like protein [Medicago truncatula]

 Score =  635 bits (1637), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 318/498 (63%), Positives = 376/498 (75%), Gaps = 26/498 (5%)

Query: 1   MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLA 60
           MEFVK+ NGG FHS++Y+++L SI+HST +   + D L SKYFKYIDVRYFT+IS+EKL 
Sbjct: 133 MEFVKVANGGAFHSSLYNRILRSIIHSTSNAEFLIDLLISKYFKYIDVRYFTFISLEKLT 192

Query: 61  RSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGS 120
           R+L+GK  SDDKT SAD   ES   +S E  +   YY +S IP +E +++ S  EMWS  
Sbjct: 193 RNLDGKDASDDKTASADGTDESQLSSSTEFIIHNMYYTISHIPPLEKSDDTSHLEMWS-- 250

Query: 121 GSSSEEGNLKEASKKSKTKVKMPKAEKSNNNSCLQALSAAIISKKMKSKFTKAWITFLRL 180
                            T  K  K++K NNN     LSAA I+KKMK KFTKAWI +LRL
Sbjct: 251 ----------------LTDDKQLKSKKRNNN----VLSAARIAKKMKLKFTKAWIAYLRL 290

Query: 181 PLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLE 240
           PLP+D++KEVLV LH+AVIP LSNPIMLCDFLTRSYD+GGVVSVMAL+SLFILMTQHGLE
Sbjct: 291 PLPLDLFKEVLVNLHQAVIPHLSNPIMLCDFLTRSYDVGGVVSVMALNSLFILMTQHGLE 350

Query: 241 YPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPS 300
           YP FYEKLYALLVPSIFMAKHRA+FF+LLDSCL+SPLLPAYLAA+F KKLSRL + VPPS
Sbjct: 351 YPKFYEKLYALLVPSIFMAKHRARFFQLLDSCLKSPLLPAYLAASFAKKLSRLLLSVPPS 410

Query: 301 GALVIMALIHNLLRRHPSINCLLHREDGNET--HNDDSKAEKEIVDAATVANISSIKPGI 358
           GALVI +L+HN+LRRHPSINCL+HRE+ NE   H  D +    + +A  VA     K G+
Sbjct: 411 GALVITSLVHNILRRHPSINCLVHREEVNEDSEHRTDEETNSNLDNAHNVAKPCQ-KSGL 469

Query: 359 DHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFC 418
           DHF+ EES+P+KS AMRSSLWEIDT  HHYCPPVSRF LSL  DLTVRAKT+E+N+ DF 
Sbjct: 470 DHFNIEESDPMKSGAMRSSLWEIDTALHHYCPPVSRFALSLGTDLTVRAKTSEVNIGDFS 529

Query: 419 SGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFA 478
           +GSYATI G EI RRVKQVPLAFYKTTP+SLFS++DFAGWTF C++  E    N E    
Sbjct: 530 AGSYATILGAEITRRVKQVPLAFYKTTPSSLFSENDFAGWTFKCEENSETIIDNNENGAK 589

Query: 479 CLSEENGHISAKRQRIEC 496
            L ++  H  AKRQRIEC
Sbjct: 590 DLLDQE-HSPAKRQRIEC 606

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553291|ref|XP_003544990.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]

 Score =  632 bits (1631), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 311/477 (65%), Positives = 370/477 (77%), Gaps = 12/477 (2%)

Query: 1   MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLA 60
           MEFVK+ NGG FHS++YHKLL SIV+ST     + D LASKYFKYIDVRYFT+IS++KLA
Sbjct: 127 MEFVKVSNGGAFHSSLYHKLLCSIVYSTSPPTFLVDLLASKYFKYIDVRYFTFISLKKLA 186

Query: 61  RSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGS 120
            +LEGK +SDDK  +AD +SES   +++E  +   YY +S +P  + ++  SE EMWS S
Sbjct: 187 STLEGKDVSDDKIANADGSSESQMSSNMECVIHNMYYTISHVPPHQGSDNTSELEMWSSS 246

Query: 121 GSSSEEGNLKEASKKSKTKVKMPKAEKSNNNSCLQALSAAIISKKMKSKFTKAWITFLRL 180
                E + K+         K  K +K N N     LSAA I+KKMK KFTKAWI +LRL
Sbjct: 247 -----ESDHKQLYGDKGADDKPQKFQKPNKN----VLSAAKIAKKMKLKFTKAWIAYLRL 297

Query: 181 PLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLE 240
           PLP+D+YKEVLV LH+AVIP LSNPIMLCDFLTRSYD+GGVVSVMALSSLF+LMTQ+GLE
Sbjct: 298 PLPIDVYKEVLVNLHQAVIPHLSNPIMLCDFLTRSYDVGGVVSVMALSSLFVLMTQYGLE 357

Query: 241 YPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPS 300
           YPNFYEKLYALLVPSIFMAKHRA+FF+LLDSCL+SPLLPAYLAA+F KKLSRL + VPPS
Sbjct: 358 YPNFYEKLYALLVPSIFMAKHRARFFQLLDSCLKSPLLPAYLAASFAKKLSRLLLSVPPS 417

Query: 301 GALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV---DAATVANISSIKPG 357
           GALVI ALIHN+LRRHPSINCL+HREDG +    D + ++ +    D A    + S K G
Sbjct: 418 GALVITALIHNILRRHPSINCLVHREDGVDEGKGDHRTDEGMATNSDNAKTVAMPSQKSG 477

Query: 358 IDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDF 417
           IDHF+  E++P KS AMRSSLWEIDT+ HHYCPP SRF LSL NDLTVRAKTTE+NV DF
Sbjct: 478 IDHFNSSETDPKKSGAMRSSLWEIDTILHHYCPPASRFALSLGNDLTVRAKTTEVNVGDF 537

Query: 418 CSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKE 474
            +GSYATI G EI RRVKQVPLAF+K TP+SLFS++DFAGWTF C++T +  N N +
Sbjct: 538 SAGSYATILGAEISRRVKQVPLAFFKATPSSLFSETDFAGWTFKCEETPKMINDNND 594

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501033|ref|XP_003519333.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 309/471 (65%), Positives = 367/471 (77%), Gaps = 17/471 (3%)

Query: 1   MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLA 60
           MEFVK+ NGG FHS++YHKLLHSIV+S+     + D LA+KYFKYIDVRYFT+IS++KLA
Sbjct: 122 MEFVKVANGGAFHSSLYHKLLHSIVYSSSPPTFLVDLLATKYFKYIDVRYFTFISLKKLA 181

Query: 61  RSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGS 120
            +LEGK +S    G+AD  SES   +++E  +   YY +S +P  + ++  S+ EMWS  
Sbjct: 182 STLEGKDVS----GAADGTSESQLSSNMECVIHNMYYTISHVPPHKGSDNTSDLEMWS-- 235

Query: 121 GSSSEEGNLKEASKKSKTKVKMPKAEKSNNNSCLQALSAAIISKKMKSKFTKAWITFLRL 180
              S E + K+ S       K  K++K N N     LSAA I+KKMK KFTKAWI +LRL
Sbjct: 236 ---SSESDHKQLSGDKGADDKPQKSQKPNKN----VLSAAKIAKKMKLKFTKAWIAYLRL 288

Query: 181 PLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLE 240
           PLP D+YKEVLV LH+AVIP LSNPI+LCDFLTRSYD+GGVVSVMALSSLF+LMTQ+GLE
Sbjct: 289 PLPHDVYKEVLVCLHQAVIPHLSNPIILCDFLTRSYDVGGVVSVMALSSLFVLMTQYGLE 348

Query: 241 YPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPS 300
           YPNFY+KLYALLVPSIFMAKHRA+FF+LLDSCL+SPLLPAYLAA+F KKLSRL + VPPS
Sbjct: 349 YPNFYDKLYALLVPSIFMAKHRARFFQLLDSCLKSPLLPAYLAASFAKKLSRLLLSVPPS 408

Query: 301 GALVIMALIHNLLRRHPSINCLLHREDG-NETHNDDSKAEKEIVDAATVANISSIKPGID 359
           GALVI ALIHNLLRRHPSINCL+HREDG +E   D+  A     D A  A + S K GID
Sbjct: 409 GALVITALIHNLLRRHPSINCLVHREDGVDEGKGDEGMATNS--DNAKTA-MPSQKSGID 465

Query: 360 HFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCS 419
           HF+  E++P KS AMRSSLWEIDT+ HHYCPP SRF LSL NDLTVRAKTTE+NV DF +
Sbjct: 466 HFNSSETDPKKSGAMRSSLWEIDTILHHYCPPASRFALSLGNDLTVRAKTTEVNVGDFSA 525

Query: 420 GSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSN 470
           GSYATI G EI RRVKQVPLAF+K TP+SLFS++DFAGWTF C++T +  N
Sbjct: 526 GSYATILGAEISRRVKQVPLAFFKATPSSLFSETDFAGWTFKCEETPKMIN 576

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449500195|ref|XP_004161032.1| PREDICTED: nucleolar complex protein 4 homolog B-like [Cucumis sativus]

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 296/497 (59%), Positives = 389/497 (78%), Gaps = 29/497 (5%)

Query: 1   MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLA 60
           MEFVK+GN GKFHSA+YH+ L SI HS+  V ++   L  KYF Y+DVRYFTYIS+++LA
Sbjct: 141 MEFVKVGNKGKFHSAVYHRFLQSIAHSSTPVDTLIALLVKKYFHYLDVRYFTYISIKELA 200

Query: 61  RSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGS 120
           ++ + + +S D  G        HS+  +E  +   + I+S IP +E++N+ S++ MW  S
Sbjct: 201 KTFKAEYMSGDVGG--------HSKEGVEF-IHIVHSIISSIPPLENSNQ-SDYTMWVES 250

Query: 121 GSSSEEGNLKEASKKSKTKVKMPKAEKSNNNSCLQALSAAIISKKMKSKFTKAWITFLRL 180
           G +    + +EA +     +KM K ++ N  + LQ L+++ I ++MK KF+KAWI+FL+L
Sbjct: 251 GDNKVLSDDQEAKQ-----LKMKKNDEENIANTLQVLTSSKIVRRMKLKFSKAWISFLKL 305

Query: 181 PLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLE 240
           PLP+D+YKEVLV L + VIP+LS PI+L DFLT+SYDIGGV+SVMALSSLF+LMT++GLE
Sbjct: 306 PLPIDVYKEVLVILDQEVIPYLSKPIILSDFLTKSYDIGGVISVMALSSLFLLMTKYGLE 365

Query: 241 YPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPS 300
           YPNFYEKLYALLVPSIFMAKHRAKFF+LLDSCL+SPLLPAYLAAAF KKLSRLS++VPPS
Sbjct: 366 YPNFYEKLYALLVPSIFMAKHRAKFFQLLDSCLKSPLLPAYLAAAFAKKLSRLSLVVPPS 425

Query: 301 GALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDH 360
           GALVI+ALIHNLLRRHPSINCL+HRE+ +E+ ND+S +E+      T A+   +KPGIDH
Sbjct: 426 GALVIIALIHNLLRRHPSINCLVHRENVSESKNDNSTSEE--AAKGTDADTPKMKPGIDH 483

Query: 361 FDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSG 420
           F+ EE++P+KS+A+RSSLWEID+LRHHYCPPVSR VLSLENDLTVR+KTTEI+VKDF +G
Sbjct: 484 FNYEEADPIKSSALRSSLWEIDSLRHHYCPPVSRLVLSLENDLTVRSKTTEIDVKDFVAG 543

Query: 421 SYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACL 480
           SY+TI G+E+++++K+VPLAFY+  PT+LFS+SDFAGW+F         N + EKN    
Sbjct: 544 SYSTILGQELKKKLKRVPLAFYQAPPTTLFSESDFAGWSF--------DNEHSEKNI--- 592

Query: 481 SEENGHISAKRQRIECS 497
            + + H+SAKRQR+  S
Sbjct: 593 -DSSDHLSAKRQRVGSS 608

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297832324|ref|XP_002884044.1| hypothetical protein ARALYDRAFT_480608 [Arabidopsis lyrata subsp. lyrata] gi|297329884|gb|EFH60303.1| hypothetical protein ARALYDRAFT_480608 [Arabidopsis lyrata subsp. lyrata]

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 296/466 (63%), Positives = 364/466 (78%), Gaps = 18/466 (3%)

Query: 1   MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLA 60
           MEFVKL N G+FHS+IYH+LLH+I+HS   +    D L SKYFKYIDVRYFTYISMEK  
Sbjct: 132 MEFVKLLNVGRFHSSIYHRLLHAIIHSEVDIEIFLDILTSKYFKYIDVRYFTYISMEKFV 191

Query: 61  RSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGS 120
           ++LE   +S D+T   +  +E+ S+ S+ELS+RK Y +LS+IP  E   EKS HEMWSGS
Sbjct: 192 KTLEA-SVSADRTAIENSEAENDSKESLELSVRKIYQVLSQIPPPEKLAEKSHHEMWSGS 250

Query: 121 GSSSEEGNLKEASKKSKTKVKMPKAEKSNNNSCLQALSAAIISKKMKSKFTKAWITFLRL 180
             SS E   K   KK KT+           +S L  LS   ISK+MK KFTKAWI+FLRL
Sbjct: 251 DESSSE---KPTDKKKKTE---------EGDSTL--LSPTTISKRMKLKFTKAWISFLRL 296

Query: 181 PLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLE 240
           PLP+D+YKEVL ++H  VIP LSNP MLCDFLT+SYDIGGVVSVMALSSLFILMTQHGLE
Sbjct: 297 PLPIDVYKEVLASIHLTVIPHLSNPTMLCDFLTKSYDIGGVVSVMALSSLFILMTQHGLE 356

Query: 241 YPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPS 300
           YPNFYEKLYALLVPS+F+AKHRAKF +LLD+CL+S +LPAYLAA+F KKLSRLS+ +PP+
Sbjct: 357 YPNFYEKLYALLVPSVFVAKHRAKFLQLLDACLKSSMLPAYLAASFTKKLSRLSLSIPPA 416

Query: 301 GALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDH 360
           G+LVI ALI+NLLRRHP+IN L+ +E    T+  +++A++   + +    I   K GID+
Sbjct: 417 GSLVITALIYNLLRRHPTINHLV-QETVENTNEGNTEADEH--NESQPKTIKKRKLGIDY 473

Query: 361 FDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSG 420
           F+++ES+P KS A++SSLWEIDTLRHHYCPPVSRF+ SLE +LT+R+KTTE+ ++DF SG
Sbjct: 474 FNNQESDPKKSGALKSSLWEIDTLRHHYCPPVSRFISSLETNLTIRSKTTEMKIEDFSSG 533

Query: 421 SYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTE 466
           SYATIFG+EIRRRVKQVPLAFYKT PTSLF+DSDF GW+F   + E
Sbjct: 534 SYATIFGDEIRRRVKQVPLAFYKTVPTSLFADSDFPGWSFTIPQEE 579

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22325731|ref|NP_179316.2| CCAAT-binding factor [Arabidopsis thaliana] gi|330251509|gb|AEC06603.1| CCAAT-binding factor [Arabidopsis thaliana]

 Score =  597 bits (1538), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 296/466 (63%), Positives = 359/466 (77%), Gaps = 18/466 (3%)

Query: 1   MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLA 60
           MEFVKL N G+FHS+IYH+LL +I+HS   +    D L SKYFKYIDVRYFTYISMEK  
Sbjct: 127 MEFVKLLNAGRFHSSIYHRLLDAIIHSEVDIEIFLDILTSKYFKYIDVRYFTYISMEKFV 186

Query: 61  RSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGS 120
           ++LE   +S D+T   +  +ES S+ S+ELS+RK Y +LS+IP  E   EKS+HEMWSGS
Sbjct: 187 KTLEA-SVSADRTVIENNEAESDSKESLELSVRKIYQVLSQIPPPEKQAEKSQHEMWSGS 245

Query: 121 GSSSEEGNLKEASKKSKTKVKMPKAEKSNNNSCLQALSAAIISKKMKSKFTKAWITFLRL 180
             S  E   K   KK KT       EK ++      LS A ISK+MK KFTKAWI+FLRL
Sbjct: 246 DESISE---KPTDKKKKT-------EKGDST----LLSPATISKRMKLKFTKAWISFLRL 291

Query: 181 PLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLE 240
           PLP+D+YKEVL ++H  VIP LSNP MLCDFLT+SYDIGGVVSVMALSSLFILMTQHGLE
Sbjct: 292 PLPIDVYKEVLASIHLTVIPHLSNPTMLCDFLTKSYDIGGVVSVMALSSLFILMTQHGLE 351

Query: 241 YPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPS 300
           YP FYEKLYALLVPS+F+AKHRAKF +LLD+CL+S +LPAYLAA+F KKLSRLS+ +PP+
Sbjct: 352 YPFFYEKLYALLVPSVFVAKHRAKFLQLLDACLKSSMLPAYLAASFTKKLSRLSLSIPPA 411

Query: 301 GALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDH 360
           G+LVI ALI+NLLRR+P+IN L+     N    D++  E    + +    I   K GID+
Sbjct: 412 GSLVITALIYNLLRRNPTINHLVQEIVENA---DEANTEAGEHNESQPKTIKKRKLGIDY 468

Query: 361 FDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSG 420
           F+++ES+P KS A++SSLWEIDTLRHHYCPPVSRF+ SLE +LT+R+KTTE+ ++DFCSG
Sbjct: 469 FNNQESDPKKSGALKSSLWEIDTLRHHYCPPVSRFISSLETNLTIRSKTTEMKIEDFCSG 528

Query: 421 SYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTE 466
           SYATIFG+EIRRRVKQVPLAFYKT PTSLF+DSDF GWTF   + E
Sbjct: 529 SYATIFGDEIRRRVKQVPLAFYKTVPTSLFADSDFPGWTFTIPQEE 574

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18086412|gb|AAL57663.1| At2g17250/T23A1.11 [Arabidopsis thaliana]

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 295/466 (63%), Positives = 359/466 (77%), Gaps = 18/466 (3%)

Query: 1   MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLA 60
           MEFVKL N G+FHS+IYH+LL +I+HS   +    D L SKYFKYIDVRYFTYISMEK  
Sbjct: 127 MEFVKLLNAGRFHSSIYHRLLDAIIHSEVDIEIFLDILTSKYFKYIDVRYFTYISMEKFV 186

Query: 61  RSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGS 120
           ++LE   +S D+T   +  +ES S+ S+ELS+RK Y +LS+IP  E   EKS+HEMWSGS
Sbjct: 187 KTLEA-SVSADRTVIENNEAESDSKESLELSVRKIYQVLSQIPPPEKQAEKSQHEMWSGS 245

Query: 121 GSSSEEGNLKEASKKSKTKVKMPKAEKSNNNSCLQALSAAIISKKMKSKFTKAWITFLRL 180
             S  E   K   KK KT       EK ++      LS A ISK+MK KFTKAWI+FLRL
Sbjct: 246 DESISE---KPTDKKKKT-------EKGDST----LLSPATISKRMKLKFTKAWISFLRL 291

Query: 181 PLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLE 240
           PLP+D+YKEVL ++H  VIP LSNP MLCDFLT+SYDIGGVVSVMALSSLFILMT+HGLE
Sbjct: 292 PLPIDVYKEVLASIHLTVIPHLSNPTMLCDFLTKSYDIGGVVSVMALSSLFILMTRHGLE 351

Query: 241 YPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPS 300
           YP FYEKLYALLVPS+F+AKHRAKF +LLD+CL+S +LPAYLAA+F KKLSRLS+ +PP+
Sbjct: 352 YPFFYEKLYALLVPSVFVAKHRAKFLQLLDACLKSSMLPAYLAASFTKKLSRLSLSIPPA 411

Query: 301 GALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDH 360
           G+LVI ALI+NLLRR+P+IN L+     N    D++  E    + +    I   K GID+
Sbjct: 412 GSLVITALIYNLLRRNPTINHLVQEIVENA---DEANTEAGEHNESQPKTIKKRKLGIDY 468

Query: 361 FDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSG 420
           F+++ES+P KS A++SSLWEIDTLRHHYCPPVSRF+ SLE +LT+R+KTTE+ ++DFCSG
Sbjct: 469 FNNQESDPKKSGALKSSLWEIDTLRHHYCPPVSRFISSLETNLTIRSKTTEMKIEDFCSG 528

Query: 421 SYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTE 466
           SYATIFG+EIRRRVKQVPLAFYKT PTSLF+DSDF GWTF   + E
Sbjct: 529 SYATIFGDEIRRRVKQVPLAFYKTVPTSLFADSDFPGWTFTIPQEE 574

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454418|ref|XP_004144952.1| PREDICTED: nucleolar complex protein 4 homolog B-like [Cucumis sativus]

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 285/499 (57%), Positives = 360/499 (72%), Gaps = 65/499 (13%)

Query: 1   MEFVKLGNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLA 60
           MEFVK+GN GKFHSA+YH+ L SI HS+  V ++   L  KYF Y+DVRYFTYIS+++LA
Sbjct: 141 MEFVKVGNKGKFHSAVYHRFLQSIAHSSTPVDTLIALLVKKYFHYLDVRYFTYISIKELA 200

Query: 61  RSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGS 120
                      KT  A+  S   S     LS                        +W   
Sbjct: 201 -----------KTFKAEYMSGWSSFTLCTLSY-------------------PPFPLW--- 227

Query: 121 GSSSEEGNLKEASKKSKTKVKMPKAEKSNNN--SCLQALSAAIISKKMKSKFTKAWITFL 178
                           KT++ +      N N  + LQ L+++ I ++MK KF+KAWI+FL
Sbjct: 228 ----------------KTQINLTTLCGLNQNIANTLQVLTSSKIVRRMKLKFSKAWISFL 271

Query: 179 RLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHG 238
           +LPLP+D+YKEVLV L + VIP+LS PI+L DFLT+SYDIGGV+SVMALSSLF+LMT++G
Sbjct: 272 KLPLPIDVYKEVLVILDQEVIPYLSKPIILSDFLTKSYDIGGVISVMALSSLFLLMTKYG 331

Query: 239 LEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVP 298
           LEYPNFYEKLYALLVPSIFMAKHRAKFF+LLDSCL+SPLLPAYLAAAF KKLSRLS++VP
Sbjct: 332 LEYPNFYEKLYALLVPSIFMAKHRAKFFQLLDSCLKSPLLPAYLAAAFAKKLSRLSLVVP 391

Query: 299 PSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGI 358
           PSGALVI+ALIHNLLRRHPSINCL+HRE+ +E+ ND+S +E+      T A+   +KPGI
Sbjct: 392 PSGALVIIALIHNLLRRHPSINCLVHRENVSESKNDNSTSEE--AAKGTDADTPKMKPGI 449

Query: 359 DHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFC 418
           DHF+ EE++P+KS+A+RSSLWEID+LRHHYCPPVSR VLSLENDLTVR+KTTEI+VKDF 
Sbjct: 450 DHFNYEEADPIKSSALRSSLWEIDSLRHHYCPPVSRLVLSLENDLTVRSKTTEIDVKDFV 509

Query: 419 SGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFA 478
           +GSY+TI G+E+++++K+VPLAFY+  PT+LFS+SDFAGW+F         N + EKN  
Sbjct: 510 AGSYSTILGQELKKKLKRVPLAFYQAPPTTLFSESDFAGWSF--------DNEHSEKNI- 560

Query: 479 CLSEENGHISAKRQRIECS 497
              + + H+SAKRQR+  S
Sbjct: 561 ---DSSDHLSAKRQRVGSS 576

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	497
TAIR|locus:2059657	577	EMB2762 "AT2G17250" [Arabidops	0.591	0.509	0.700	4.4e-141
UNIPROTKB|F1Q279	516	NOC4L "Uncharacterized protein	0.344	0.331	0.508	3.2e-59
UNIPROTKB|F1P3D2	519	EP400 "Uncharacterized protein	0.334	0.319	0.5	6.4e-57
UNIPROTKB|Q5ZJC7	508	NOC4L "Nucleolar complex prote	0.334	0.326	0.5	6.4e-57
MGI|MGI:2140843	516	Noc4l "nucleolar complex assoc	0.346	0.333	0.491	1e-56
RGD|1310661	516	Noc4l "nucleolar complex assoc	0.346	0.333	0.485	3.4e-56
UNIPROTKB|F1RFR4	516	NOC4L "Uncharacterized protein	0.346	0.333	0.505	1.3e-53
ZFIN|ZDB-GENE-050522-98	525	noc4l "nucleolar complex assoc	0.346	0.327	0.476	2.6e-51
CGD|CAL0002495	562	NOC4 [Candida albicans (taxid:	0.346	0.306	0.436	2.5e-47
UNIPROTKB|Q59U49	562	CaO19.1902 "Putative uncharact	0.346	0.306	0.436	2.5e-47

TAIR|locus:2059657 EMB2762 "AT2G17250" [Arabidopsis thaliana (taxid:3702)]

 Score = 1094 (390.2 bits), Expect = 4.4e-141, Sum P(2) = 4.4e-141
 Identities = 208/297 (70%), Positives = 250/297 (84%)

Query:   170 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 229
             FTKAWI+FLRLPLP+D+YKEVL ++H  VIP LSNP MLCDFLT+SYDIGGVVSVMALSS
Sbjct:   281 FTKAWISFLRLPLPIDVYKEVLASIHLTVIPHLSNPTMLCDFLTKSYDIGGVVSVMALSS 340

Query:   230 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 289
             LFILMTQHGLEYP FYEKLYALLVPS+F+AKHRAKF +LLD+CL+S +LPAYLAA+F KK
Sbjct:   341 LFILMTQHGLEYPFFYEKLYALLVPSVFVAKHRAKFLQLLDACLKSSMLPAYLAASFTKK 400

Query:   290 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVA 349
             LSRLS+ +PP+G+LVI ALI+NLLRR+P+IN L+     N    D++  E    + +   
Sbjct:   401 LSRLSLSIPPAGSLVITALIYNLLRRNPTINHLVQEIVENA---DEANTEAGEHNESQPK 457

Query:   350 NISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKT 409
              I   K GID+F+++ES+P KS A++SSLWEIDTLRHHYCPPVSRF+ SLE +LT+R+KT
Sbjct:   458 TIKKRKLGIDYFNNQESDPKKSGALKSSLWEIDTLRHHYCPPVSRFISSLETNLTIRSKT 517

Query:   410 TEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTE 466
             TE+ ++DFCSGSYATIFG+EIRRRVKQVPLAFYKT PTSLF+DSDF GWTF   + E
Sbjct:   518 TEMKIEDFCSGSYATIFGDEIRRRVKQVPLAFYKTVPTSLFADSDFPGWTFTIPQEE 574

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IDA

GO:0000478 "endonucleolytic cleavage involved in rRNA processing" evidence=RCA

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

GO:0005654 "nucleoplasm" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0006364 "rRNA processing" evidence=IMP

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

UNIPROTKB|F1Q279 NOC4L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 461 (167.3 bits), Expect = 3.2e-59, Sum P(3) = 3.2e-59
 Identities = 87/171 (50%), Positives = 120/171 (70%)

Query:   170 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 229
             F   W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLTR+YD+GG +S++AL+ 
Sbjct:   252 FQLMWLGFLKHELPLGLYKKVLVIMHDSILPHLAQPSLMIDFLTRAYDMGGAISLLALNG 311

Query:   230 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 289
             LFIL+ QH LEYP+FY KLY LL PSIF  K+RA+FF L D  L S  LPAYL AAF K+
Sbjct:   312 LFILIHQHNLEYPDFYRKLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKR 371

Query:   290 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEK 340
             LSRL++  PP   L+++  I NLLRRHP+   L+H   G+E  +D    E+
Sbjct:   372 LSRLALTAPPEALLMVLPFICNLLRRHPACRVLVHHPLGHELDSDPFDPEE 422

GO:0042254 "ribosome biogenesis" evidence=IEA

UNIPROTKB|F1P3D2 EP400 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 462 (167.7 bits), Expect = 6.4e-57, Sum P(3) = 6.4e-57
 Identities = 83/166 (50%), Positives = 122/166 (73%)

Query:   170 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 229
             F + W+TFL+  LP  +YK+VLV LH +++P+++ P ++ DFLT +Y +GG +S++AL+ 
Sbjct:   255 FERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAISLLALNG 314

Query:   230 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 289
             LFIL+ QH LEYP+FY+KLY+LL PSI+  K+RA+FF L D  L S  LPAYL AAF+K+
Sbjct:   315 LFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLVAAFIKR 374

Query:   290 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD 335
             LSRL++  PP   L+++  I NL RRHP+   L+HR +G +  ++D
Sbjct:   375 LSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSED 420

GO:0042254 "ribosome biogenesis" evidence=IEA

UNIPROTKB|Q5ZJC7 NOC4L "Nucleolar complex protein 4 homolog" [Gallus gallus (taxid:9031)]

 Score = 462 (167.7 bits), Expect = 6.4e-57, Sum P(3) = 6.4e-57
 Identities = 83/166 (50%), Positives = 122/166 (73%)

Query:   170 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 229
             F + W+TFL+  LP  +YK+VLV LH +++P+++ P ++ DFLT +Y +GG +S++AL+ 
Sbjct:   244 FERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAISLLALNG 303

Query:   230 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 289
             LFIL+ QH LEYP+FY+KLY+LL PSI+  K+RA+FF L D  L S  LPAYL AAF+K+
Sbjct:   304 LFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLVAAFIKR 363

Query:   290 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD 335
             LSRL++  PP   L+++  I NL RRHP+   L+HR +G +  ++D
Sbjct:   364 LSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSED 409

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

MGI|MGI:2140843 Noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 454 (164.9 bits), Expect = 1.0e-56, Sum P(3) = 1.0e-56
 Identities = 85/173 (49%), Positives = 121/173 (69%)

Query:   170 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 229
             F + W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S++AL+ 
Sbjct:   252 FQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAISLLALNG 311

Query:   230 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 289
             LFIL+ +H LEYP+FY+KLY LL PSIF  K+RA+FF L D  L S  LPAYL AAF K+
Sbjct:   312 LFILIHKHNLEYPDFYQKLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKR 371

Query:   290 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD-SKAEKE 341
             L+RL++  PP   L+++ LI NLLRRHP+   ++HR  G E   D     EK+
Sbjct:   372 LARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPELDADPYDPTEKD 424

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1310661 Noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 451 (163.8 bits), Expect = 3.4e-56, Sum P(3) = 3.4e-56
 Identities = 84/173 (48%), Positives = 121/173 (69%)

Query:   170 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 229
             F + W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S++AL+ 
Sbjct:   252 FQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAISLLALNG 311

Query:   230 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 289
             LFIL+ +H LEYP+FY++LY LL PSIF  K+RA+FF L D  L S  LPAYL AAF K+
Sbjct:   312 LFILIHKHNLEYPDFYQRLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKR 371

Query:   290 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD-SKAEKE 341
             L+RL++  PP   L+++ LI NLLRRHP+   ++HR  G E   D     EK+
Sbjct:   372 LARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPELDADPYDPTEKD 424

GO:0005730 "nucleolus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

UNIPROTKB|F1RFR4 NOC4L "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 456 (165.6 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
 Identities = 87/172 (50%), Positives = 120/172 (69%)

Query:   170 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 229
             F   W+ FL+  LP+ I K+VLV +H +++P L+ P ++ DFLTR+YDIGG +S++AL+ 
Sbjct:   252 FQVMWLGFLKHQLPLRICKKVLVIMHDSILPHLAQPTLMIDFLTRAYDIGGAISLLALNG 311

Query:   230 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 289
             LFIL+ +H LEYP+FY KLY+LL PS+F  K+RA+FF L D  L S  LPAYL AAF K+
Sbjct:   312 LFILIHKHNLEYPDFYRKLYSLLDPSVFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKR 371

Query:   290 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 341
             L+RL++  PP   L+++  I NLLRRHP+   L+HR  G E   D    E+E
Sbjct:   372 LARLALTAPPEALLMVLPFICNLLRRHPACRVLVHRPRGPELDADPYDPEEE 423

GO:0042254 "ribosome biogenesis" evidence=IEA

ZFIN|ZDB-GENE-050522-98 noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 440 (159.9 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
 Identities = 82/172 (47%), Positives = 119/172 (69%)

Query:   170 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 229
             F + W+ FLR  LP  +YK++LV LH +++P +S+P ++ DFL+ +YDIGG +S+ AL+ 
Sbjct:   261 FEQMWLLFLRYKLPGSMYKKILVILHESILPQMSDPKLMMDFLSAAYDIGGAISLSALNG 320

Query:   230 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 289
             LF+ + +H L+YP+FY+KLY LL PSIF  K+RA+FF L +  L S  LP YL AAFVK+
Sbjct:   321 LFVPIHEHNLDYPDFYKKLYNLLDPSIFHVKYRARFFHLANIFLSSTHLPVYLVAAFVKR 380

Query:   290 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 341
             L+RLS+  PP+  L+++  I NL+RRHPS   L+HR    +   DD    +E
Sbjct:   381 LARLSLTAPPTALLILLPFICNLIRRHPSCRVLIHRPSAADEPCDDPYVMEE 432

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

CGD|CAL0002495 NOC4 [Candida albicans (taxid:5476)]

 Score = 383 (139.9 bits), Expect = 2.5e-47, Sum P(2) = 2.5e-47
 Identities = 76/174 (43%), Positives = 112/174 (64%)

Query:   170 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGG--VVSVMAL 227
             F K+ I  L  PL  + YK VL  LH+ +IP++S P  L DFLT  YD+    +V ++AL
Sbjct:   291 FQKSVIAMLSYPLLQEQYKSVLTILHKRIIPYMSQPQSLMDFLTDCYDLTDDLIVPILAL 350

Query:   228 SSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFV 287
             +SL+ LM  + LEYP+FY KLY+LL P +   K+R++FF L D  L S  L A L A+F+
Sbjct:   351 NSLYELMKNYNLEYPDFYSKLYSLLTPELLYTKYRSRFFRLCDLFLSSTHLSANLVASFI 410

Query:   288 KKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 341
             KKL+R+S+    SG ++I+  I+NLL+RHP+   +LH+ED    + D   +E++
Sbjct:   411 KKLARISLAASASGVVIIIPFIYNLLKRHPTCMIMLHKEDTESGYQDPFNSEEK 464

GO:0003674 "molecular_function" evidence=ND

GO:0035690 "cellular response to drug" evidence=IMP

GO:0030692 "Noc4p-Nop14p complex" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

UNIPROTKB|Q59U49 CaO19.1902 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 383 (139.9 bits), Expect = 2.5e-47, Sum P(2) = 2.5e-47
 Identities = 76/174 (43%), Positives = 112/174 (64%)

Query:   170 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGG--VVSVMAL 227
             F K+ I  L  PL  + YK VL  LH+ +IP++S P  L DFLT  YD+    +V ++AL
Sbjct:   291 FQKSVIAMLSYPLLQEQYKSVLTILHKRIIPYMSQPQSLMDFLTDCYDLTDDLIVPILAL 350

Query:   228 SSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFV 287
             +SL+ LM  + LEYP+FY KLY+LL P +   K+R++FF L D  L S  L A L A+F+
Sbjct:   351 NSLYELMKNYNLEYPDFYSKLYSLLTPELLYTKYRSRFFRLCDLFLSSTHLSANLVASFI 410

Query:   288 KKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 341
             KKL+R+S+    SG ++I+  I+NLL+RHP+   +LH+ED    + D   +E++
Sbjct:   411 KKLARISLAASASGVVIIIPFIYNLLKRHPTCMIMLHKEDTESGYQDPFNSEEK 464

GO:0003674 "molecular_function" evidence=ND

GO:0035690 "cellular response to drug" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	497
pfam03914	151	pfam03914, CBF, CBF/Mak21 family	6e-51
COG5117	657	COG5117, NOC3, Protein involved in the nuclear exp	0.002

>gnl|CDD|217788 pfam03914, CBF, CBF/Mak21 family

 Score =  170 bits (432), Expect = 6e-51
 Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 27/176 (15%)

Query: 222 VSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAK-FFELLDSCLRSPLLPA 280
            S++AL  LF LM+ H L+   FY KLY LL+  +  + ++++ F  LLD  L+S  LPA
Sbjct: 1   TSILALFLLFQLMSGHNLDLDRFYRKLYRLLLDKLLHSSYKSRLFLRLLDKALKSDHLPA 60

Query: 281 YLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEK 340
              AAFVK+L +L++  PPS AL I+ LI NLL+RHP++  LLH E+             
Sbjct: 61  QRVAAFVKRLLQLALHAPPSFALGILPLIRNLLKRHPNLKSLLHTEERGG---------- 110

Query: 341 EIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFV 396
                               +D EE +P  SNA+ SSLWE++ L++HY P V++  
Sbjct: 111 ----------------EDGPYDPEERDPEYSNALNSSLWELELLQNHYHPSVAKLA 150

Length = 151

>gnl|CDD|227447 COG5117, NOC3, Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis / Intracellular trafficking and secretion]

 Score = 40.8 bits (95), Expect = 0.002
 Identities = 25/117 (21%), Positives = 36/117 (30%), Gaps = 27/117 (23%)

Query: 283 AAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEI 342
              F K+L       P      I+ +   L  R+   + L   E                
Sbjct: 562 HVIFKKRLLYCCSRSPEEFKGAILDISAKLDIRYSDCSNLKCSEF--------------- 606

Query: 343 VDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 399
                         G  + D   SNP  SN+  + L+E   L+ HY P VS+    L
Sbjct: 607 ------------DIGAGNVDSIPSNPDLSNSSTAVLFEYFLLKQHYSPAVSQSAKEL 651

Length = 657

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	497
KOG2154	505	consensus Predicted nucleolar protein involved in	100.0
KOG2038	988	consensus CAATT-binding transcription factor/60S r	100.0
PF03914	164	CBF: CBF/Mak21 family; InterPro: IPR005612 This do	100.0
COG5593	821	Nucleic-acid-binding protein possibly involved in	99.97
COG5117	657	NOC3 Protein involved in the nuclear export of pre	99.85
KOG2153	704	consensus Protein involved in the nuclear export o	99.79
KOG2153	704	consensus Protein involved in the nuclear export o	97.93

>KOG2154 consensus Predicted nucleolar protein involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=1.2e-72  Score=582.26  Aligned_cols=357  Identities=36%  Similarity=0.599  Sum_probs=311.4

Q ss_pred             cCCCccChHHHHHHHHHHHcCCCChhhHHHHHHhhccccCcchhhHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccchh
Q 010906            7 GNGGKFHSAIYHKLLHSIVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHSRA   86 (497)
Q Consensus         7 ~~~~~f~~~~~~~l~~~l~~~~~~~~~~~~~~~~~y~~y~Dvryy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (497)
                      ...|.||+.+|++++.+|+.+    +-.+..|.+. ..|+|.||.+|....+.+.++..+.+.             ++  
T Consensus       135 ~~~g~fp~~~f~~l~~~LisS----dv~it~f~e~-~~~t~k~f~~~~~~~~~~~s~~~q~~~-------------Dp--  194 (505)
T KOG2154|consen  135 AENGGFPNSIFHRLLDALISS----DVDITIFLEN-VGYTDKYFKYFDITLTQVRSVVPQHPT-------------DP--  194 (505)
T ss_pred             ccccCCcHHHHHHHHHHHhcc----cccHHHHHHh-ccchhHHHHHHHHHHHHHHHhccCCCC-------------CC--
Confidence            346779999999999999987    3456777654 789999999999888877776542211             11  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCCCcccccccccccCCCCCcccchhHhhhhhhhcccCcchhccCcchhhhhchHHHHHHHH
Q 010906           87 SIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPKAEKSNNNSCLQALSAAIISKKM  166 (497)
Q Consensus        87 ~~~~~~~n~~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (497)
                        +.+..|.+.+++.++++-...   ....|...+                                  .++.+...+++
T Consensus       195 --~v~~~N~~~~ls~v~~p~~~~---S~~~~~~~~----------------------------------~p~~~~~~~~~  235 (505)
T KOG2154|consen  195 --PVIANNELEILSLVSLPLSVS---STSSYVLEP----------------------------------IPKQTENEKQI  235 (505)
T ss_pred             --chhhcchHHHhhhccCCCCcc---cHhhhcccc----------------------------------CccccccHHHH
Confidence              467789999999999875211   112233321                                  11112223678


Q ss_pred             HHHHHHHHHHhccCCCChhHHHHHHHHhhhhhhcccCChhhHhhHHHHHhh-cCCchHHHHHHHHHHHHHhcCCCcchHH
Q 010906          167 KSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYD-IGGVVSVMALSSLFILMTQHGLEYPNFY  245 (497)
Q Consensus       167 k~~~~~awL~~L~~~l~~~l~k~vL~~L~k~i~pHl~np~ll~DFlt~~~d-~gg~isllAL~~LF~L~~~~nld~~rFY  245 (497)
                      ++.|+.+|+++++..+|.++++++|.+++++|+||+..|..++||||++|| .||++||+||+|||+||++||++||.||
T Consensus       236 ~k~f~~~Wls~l~~~ls~~lykkil~vih~rvip~l~~P~kl~DFLtdsyd~~~g~vslLALngLF~Lm~khNleYP~FY  315 (505)
T KOG2154|consen  236 RKSFQNMWLSSLNGELSLKLYKKILLVIHKRVIPHLISPTKLMDFLTDSYDDIGGVVSLLALNGLFILMTKHNLEYPDFY  315 (505)
T ss_pred             HHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHhccCCchhHHHHhHHHHHHHHcCCCCchHH
Confidence            999999999999999999999999999999999999999999999999999 8999999999999999999999999999


Q ss_pred             HHHHHhhCcCcccchhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHhCccccccccc
Q 010906          246 EKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHR  325 (497)
Q Consensus       246 ~~LY~LLdp~l~~s~~ra~fl~LL~~~Lks~~lp~~rVAAFiKRLlqlaL~~pp~~~l~iL~lI~nLLkrhP~l~~Ll~~  325 (497)
                      .+||+||+|++||.+||+|||+|+|.||+|+|||+++||||+|||+|+||.+||.+++.+|+||+||++|||+|+.|+|+
T Consensus       316 ~KLY~Ll~Pslfh~KyRarff~L~D~FLSSTHLpa~LvAsFlKrLaRlaL~APpeA~~~vipfI~Nll~rHp~c~~lvhr  395 (505)
T KOG2154|consen  316 EKLYALLNPSLFHVKYRARFFRLADLFLSSTHLPAYLVASFLKRLARLALEAPPEAIVIVIPFICNLLRRHPNCQPLVHR  395 (505)
T ss_pred             HHHHHhcCchHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHhCCchhhhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCCCCCCCcCCCCCcccHHHHHHHhhccChHHHHHHHHhhccccc
Q 010906          326 EDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTV  405 (497)
Q Consensus       326 ~~~~~~~~~~~~~eg~~~d~~~~~~~~~~~~~~d~Ydp~~~DP~~~nA~~SsLWEL~~L~~HyHPsVa~~A~~l~~g~~~  405 (497)
                      +...+                         ...||||+++.||..++|++|+||||.+||.||||+|+..|+.+.+++++
T Consensus       396 ~~~~~-------------------------~~~Dpfd~~EtDP~ks~ALeSSLWEL~~Lq~Hy~p~Va~~A~~~~q~~~k  450 (505)
T KOG2154|consen  396 SHALS-------------------------LYDDPFDNDETDPKKSGALESSLWELELLQTHYHPEVAKAASFFNQSLYK  450 (505)
T ss_pred             ccccc-------------------------CCCCCCCCCCCChhhhhhHHHHHHHHHHHHHhhcHHHHHHHHHHhccCcc
Confidence            87522                         24599999999999999999999999999999999999999999999886


Q ss_pred             cccccccccCcCCCCcHHHHHHHHHhcccC-CCCcccccCCCccccCCC
Q 010906          406 RAKTTEINVKDFCSGSYATIFGEEIRRRVK-QVPLAFYKTTPTSLFSDS  453 (497)
Q Consensus       406 ~~~~~~y~~~dfld~s~~~~ld~e~~k~~k-~~p~~~~~~~p~~lf~~~  453 (497)
                          ++|+++|++|++|..++|+|++|+.| .+|+++.+  ++++++..
T Consensus       451 ----~ef~~ed~ld~~y~~l~d~el~~kgk~~p~lefe~--~t~~~g~~  493 (505)
T KOG2154|consen  451 ----PEFGLEDGLDSKYSVLQDGELSRKGKRFPPLEFER--RTGLGGRF  493 (505)
T ss_pred             ----ccccCcchhhhhhHHhhcchhhcccCCCCCccccc--ccccCCch
Confidence                58999999999999999999999988 66666665  68888764

>KOG2038 consensus CAATT-binding transcription factor/60S ribosomal subunit biogenesis protein [Translation, ribosomal structure and biogenesis; Transcription]

Probab=100.00  E-value=1.1e-47  Score=413.43  Aligned_cols=254  Identities=26%  Similarity=0.367  Sum_probs=219.3

Q ss_pred             HHHHHHHHHHHHhccCCCC-----hhHHHHHHHHhhhhhhcccCChhhHhhHHHHHhhcCCchHHHHHHHHHHHHHhcCC
Q 010906          165 KMKSKFTKAWITFLRLPLP-----VDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGL  239 (497)
Q Consensus       165 ~~k~~~~~awL~~L~~~l~-----~~l~k~vL~~L~k~i~pHl~np~ll~DFlt~~~d~gg~isllAL~~LF~L~~~~nl  239 (497)
                      +..+++.+|.|+|+|||+|     .+.+..++..|++  +.|.+|      |+         +|||||++|||++....+
T Consensus       468 e~nsrllSAlLTGvNRAfPfaq~~ddk~~~~~~tLFk--l~HssN------FN---------TsVQaLmLlfQvs~~~~~  530 (988)
T KOG2038|consen  468 ELNSRLLSALLTGVNRAFPFAQTADDKLEEQMKTLFK--LTHSSN------FN---------TSVQALMLLFQVSKKNDY  530 (988)
T ss_pred             hhhHHHHHHHHhcccccCCcccCchHHHHHHhHHHHH--HHhhcc------cc---------hhHHHHHHHHHHHHhhhh
Confidence            5688999999999999987     4689999999999  999999      98         599999999999999999


Q ss_pred             CcchHHHHHHH-hhCcCcccchhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHhCcc
Q 010906          240 EYPNFYEKLYA-LLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPS  318 (497)
Q Consensus       240 d~~rFY~~LY~-LLdp~l~~s~~ra~fl~LL~~~Lks~~lp~~rVAAFiKRLlqlaL~~pp~~~l~iL~lI~nLLkrhP~  318 (497)
                      .++|||++||+ ||||+++.++++++||+||+++|+.|. ++.||+||||||+|||++.+|+++||+|.++++|++..|.
T Consensus       531 vSDRyY~aLY~kLLdP~l~~sSKq~m~LnLlykslK~D~-ni~RV~AFvKRlLQVa~~q~P~~i~G~l~Llsel~Karp~  609 (988)
T KOG2038|consen  531 VSDRYYRALYRKLLDPRLMNSSKQAMFLNLLYKSLKEDI-NIQRVRAFVKRLLQVAVQQQPPFICGILFLLSELLKARPT  609 (988)
T ss_pred             hHHHHHHHHHHHhcCcccCchHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHhcCCchhHhHHHHHHHHHHhcch
Confidence            99999999999 999999999999999999999999997 9999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCC--------CCc--------hhHHHHHH----------h----hhhhc------c-cCCCCCCCCC
Q 010906          319 INCLLHREDGNETHN--------DDS--------KAEKEIVD----------A----ATVAN------I-SSIKPGIDHF  361 (497)
Q Consensus       319 l~~Ll~~~~~~~~~~--------~~~--------~~eg~~~d----------~----~~~~~------~-~~~~~~~d~Y  361 (497)
                      ++.|+.+.+..+.++        ++.        +.+|..++          +    ...+.      . -.++...++|
T Consensus       610 l~~lv~~~~~~D~e~dv~~~~e~DD~deek~vd~Dke~~~vdk~~~e~~~~e~ds~s~k~E~~~~~~~d~~~~~~~~~~Y  689 (988)
T KOG2038|consen  610 LRKLVVNSEDIDPEEDVVAQMENDDVDEEKKVDLDKEGKEVDKNGVEEEVEEEDSVSEKKEDLDKKKVDPIGARGAKTPY  689 (988)
T ss_pred             HHHHhhCCcccChhhhhhhhhcccccchhhhccccccceeecccccccccccccccccchhhhhhhhccccccccCCCCC
Confidence            999987655422211        011        11111110          0    00000      0 0134456799


Q ss_pred             CCCCCCCcCCCCCcccHHHHHHHhhccChHHHHHHHHhhccccccccccccccCcCCCCcHHHHHHHHHhcccCCCCccc
Q 010906          362 DDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF  441 (497)
Q Consensus       362 dp~~~DP~~~nA~~SsLWEL~~L~~HyHPsVa~~A~~l~~g~~~~~~~~~y~~~dfld~s~~~~ld~e~~k~~k~~p~~~  441 (497)
                      ||.+|||.||||..||||||..|.+||||+|+.||+.|.+|..+     .|+++|+.|+|+++||||++.|.+|++..+.
T Consensus       690 D~r~R~P~f~nAd~tslWEl~~ls~HfHPSVa~~Akall~G~~i-----~y~g~~L~dfTL~~FLDrF~yRnPK~~t~~~  764 (988)
T KOG2038|consen  690 DPRKRNPLFCNADHTSLWELLLLSKHFHPSVATFAKALLEGEEI-----QYGGPPLNDFTLMAFLDRFAYRNPKQVTKAR  764 (988)
T ss_pred             CcccCCccccCCccchHHHHHHHhhhcCchHHHHHHHHhcCcee-----ecCCCchhHHHHHHHHHHHHhcCcccccccC
Confidence            99999999999999999999999999999999999999999987     5999999999999999999999999887655

>PF03914 CBF: CBF/Mak21 family; InterPro: IPR005612 This domain is present in the CAATT-binding protein which is essential for growth and necessary for 60S ribosomal subunit biogenesis

Probab=100.00  E-value=3.5e-40  Score=307.37  Aligned_cols=162  Identities=41%  Similarity=0.702  Sum_probs=143.2

Q ss_pred             hHHHHHHHHHHHHHhcCCCcchHHHHHHHhh-CcCcccchhH-HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhhcCCh
Q 010906          222 VSVMALSSLFILMTQHGLEYPNFYEKLYALL-VPSIFMAKHR-AKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPP  299 (497)
Q Consensus       222 isllAL~~LF~L~~~~nld~~rFY~~LY~LL-dp~l~~s~~r-a~fl~LL~~~Lks~~lp~~rVAAFiKRLlqlaL~~pp  299 (497)
                      ++|+||.++|+|++++|+|+++||++||++| +|..++++++ .+||++|+.+|+++++|..||+||||||+|+|+++||
T Consensus         1 ~~i~al~~l~~l~~~~n~d~~~FY~~LY~~L~~p~~~~~~~~~~~~l~lL~~~l~~~~~~~~rvaAFiKRLl~~sl~~~~   80 (164)
T PF03914_consen    1 TCIQALFLLFQLLSGQNIDLDRFYRALYSLLLDPELFSSSDKSALLLNLLDKSLKSDHLPIQRVAAFIKRLLQLSLHLPP   80 (164)
T ss_pred             CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHcchhhccccchHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHcCCH
Confidence            5899999999999999999999999999966 9999998865 5599999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCCCCCCCcCCCCCcccHH
Q 010906          300 SGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLW  379 (497)
Q Consensus       300 ~~~l~iL~lI~nLLkrhP~l~~Ll~~~~~~~~~~~~~~~eg~~~d~~~~~~~~~~~~~~d~Ydp~~~DP~~~nA~~SsLW  379 (497)
                      ++++++|.+|++|+++||.|+.|+++++...+  .+.+++++            .....++|+|+++||++|||..|+||
T Consensus        81 ~~~~~~L~~i~~ll~~~p~l~~ll~~~~~~~~--~~~~~~~~------------~~~~~~~Y~p~~~dP~~~~a~~s~lW  146 (164)
T PF03914_consen   81 SFALAILALIRKLLKRHPNLKSLLDNEEKKAD--SGSEEEDE------------EDKSEDKYDPEKRDPEFSNALASSLW  146 (164)
T ss_pred             HHHHHHHHHHHHHHHHCHHHHHHhcCCccccc--cchhhccc------------ccccccccCcCCCCHhHcCCchhHHH
Confidence            99999999999999999999999988775321  01111111            12456799999999999999999999


Q ss_pred             HHHHHhhccChHHHHHHH
Q 010906          380 EIDTLRHHYCPPVSRFVL  397 (497)
Q Consensus       380 EL~~L~~HyHPsVa~~A~  397 (497)
                      ||.+|++||||+|+++|+
T Consensus       147 EL~lL~~H~hP~V~~~A~  164 (164)
T PF03914_consen  147 ELNLLRNHYHPSVRQFAR  164 (164)
T ss_pred             HHHHHHHCCCcHHHHHhC
Confidence            999999999999999985

Other proteins containing this domain stimulate transcription from the HSP70 promoter.

>COG5593 Nucleic-acid-binding protein possibly involved in ribosomal biogenesis [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=1.4e-30  Score=272.95  Aligned_cols=252  Identities=21%  Similarity=0.196  Sum_probs=209.1

Q ss_pred             HHHHHHHHHHHHhccCCCC-----hhHHHHHHHHhhhhhhcccCChhhHhhHHHHHhhcCCchHHHHHHHHHHHHHhcCC
Q 010906          165 KMKSKFTKAWITFLRLPLP-----VDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGL  239 (497)
Q Consensus       165 ~~k~~~~~awL~~L~~~l~-----~~l~k~vL~~L~k~i~pHl~np~ll~DFlt~~~d~gg~isllAL~~LF~L~~~~nl  239 (497)
                      +..+.+.++.|+++||+.|     ...++.++.+|++  +.|-.+      |+         +++|||++++|..-..-+
T Consensus       363 eknS~~~savLtG~nRa~pfa~l~~~~~~~Hm~tlfk--ith~~~------fn---------ts~qalmli~q~~~~~~l  425 (821)
T COG5593         363 EKNSFYGSAVLTGCNRAGPFALLFRNAVKSHMMTLFK--ITHEFL------FN---------TSEQALMLIDQEFYRFLL  425 (821)
T ss_pred             hhhhHHHHHHHhcccccCchhhhhHHHHHHHHHHHHh--hhhhhh------hh---------HHHHHHHHHHHHHHHHhh
Confidence            4467889999999999854     6889999999999  999988      88         599999999999999999


Q ss_pred             CcchHHHHHHH-hhCcCcccchhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhhc-CChhHHHHHHHHHHHHHHhCc
Q 010906          240 EYPNFYEKLYA-LLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSIL-VPPSGALVIMALIHNLLRRHP  317 (497)
Q Consensus       240 d~~rFY~~LY~-LLdp~l~~s~~ra~fl~LL~~~Lks~~lp~~rVAAFiKRLlqlaL~-~pp~~~l~iL~lI~nLLkrhP  317 (497)
                      +++|||+.||. |+||.+..+++++.+++|++.+|+.+. ++.||-||+||++|+|-+ ..+++.-+....+.+|-+.-|
T Consensus       426 ~SdryY~~lYesl~dprls~ssKqgiylnllykSL~vd~-nV~rv~af~kr~lQv~S~w~~~p~~tg~f~~l~ql~~a~~  504 (821)
T COG5593         426 DSDRYYTPLYESLIDPRLSESSKQGIYLNLLYKSLRVDT-NVHRVDAFRKRALQVISGWMVLPFDTGDFMSLLQLEMACG  504 (821)
T ss_pred             ccchhhhhHHHHHhhhhhhcccccchhHHHHHHHHHHhc-CchHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHhH
Confidence            99999999999 999999999999999999999999998 899999999999999655 567788888888999999999


Q ss_pred             cccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCCCCCCCcCCCCCcccHHHHHHHhhccChHHHHHHH
Q 010906          318 SINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVL  397 (497)
Q Consensus       318 ~l~~Ll~~~~~~~~~~~~~~~eg~~~d~~~~~~~~~~~~~~d~Ydp~~~DP~~~nA~~SsLWEL~~L~~HyHPsVa~~A~  397 (497)
                      .++.|+.+.+-+=+-+.+.+++..+           .......||..+|||.++||..|||||+..+.+||||+|..+|+
T Consensus       505 ~lk~l~tn~~vd~e~e~d~~eeq~d-----------kd~krkeydgrkrdpk~anae~s~lwei~~finhfhptv~~~a~  573 (821)
T COG5593         505 DLKNLLTNTPVDYEYESDAEEEQGD-----------KDIKRKEYDGRKRDPKFANAEKSSLWEINNFINHFHPTVKTYAN  573 (821)
T ss_pred             HHHHHhcCCCcccccccchhhhhcc-----------cchhhhhccCcccCcccccccccchhhhhhhhhhcccHHHHHHH
Confidence            9999998765421111111111111           11223469999999999999999999999999999999999999


Q ss_pred             HhhccccccccccccccCcCCCCcHHHHHHHHHhcccCCCCcccccCCCccccC
Q 010906          398 SLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFS  451 (497)
Q Consensus       398 ~l~~g~~~~~~~~~y~~~dfld~s~~~~ld~e~~k~~k~~p~~~~~~~p~~lf~  451 (497)
                      .+..|..+      .--.++.=||+..|||+++.|.+|+-..+-...+-+-||+
T Consensus       574 a~v~ge~~------i~kp~l~l~tl~hfldrf~yr~~kqt~~arg~simqpl~~  621 (821)
T COG5593         574 AYVTGEEQ------IAKPDLGLFTLSHFLDRFVYRSAKQTNTARGTSIMQPLFS  621 (821)
T ss_pred             Hhhhhhhh------hcCCCcchhhHHHHHHHHHhcCcccccccccchhhhhhhc
Confidence            99999854      2334556699999999999999988766655444444554

>COG5117 NOC3 Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis / Intracellular trafficking and secretion]

Probab=99.85  E-value=3.8e-20  Score=192.26  Aligned_cols=205  Identities=20%  Similarity=0.252  Sum_probs=174.4

Q ss_pred             HHHHHHHHHhccCCCChhHHHHHHHHhhhhhhcccCChhhHhhHHHHHhhc---------CC---chHHHHHHHHHHHHH
Q 010906          168 SKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDI---------GG---VVSVMALSSLFILMT  235 (497)
Q Consensus       168 ~~~~~awL~~L~~~l~~~l~k~vL~~L~k~i~pHl~np~ll~DFlt~~~d~---------gg---~isllAL~~LF~L~~  235 (497)
                      +..+..||.+|+ .--.+++..||+||.|  +.||.||++++|||..+|..         |.   .-+++|+.+.|.|++
T Consensus       406 kiif~~Yf~vLk-~~~k~lig~vleGl~k--~~~~~n~eflGD~Levl~eL~~d~~~dk~ss~a~r~alLcI~tAF~i~S  482 (657)
T COG5117         406 KIIFRLYFMVLK-GDRKDLIGYVLEGLVK--YRKIINPEFLGDLLEVLYELLNDNPLDKISSDARRQALLCILTAFEIAS  482 (657)
T ss_pred             HHHHHHHHHHHh-cchHHHHHHHHHHHHH--HHhhcCHHHHhHHHHHHHHHHcCCchhhhhHHHHHHHHHHhhHHHHHhh
Confidence            345567777776 3346799999999999  99999999999999998853         21   357889999999886


Q ss_pred             h-----cCCCcchHHHHHHHhhCcCccc--------------------------chhHHHHHHHHHH-HhcCCCChHHHH
Q 010906          236 Q-----HGLEYPNFYEKLYALLVPSIFM--------------------------AKHRAKFFELLDS-CLRSPLLPAYLA  283 (497)
Q Consensus       236 ~-----~nld~~rFY~~LY~LLdp~l~~--------------------------s~~ra~fl~LL~~-~Lks~~lp~~rV  283 (497)
                      .     .|+|.+.|...||+++.|--+.                          +-...+++.+++. |.++.+....|.
T Consensus       483 ~t~ygk~n~Dl~~fVd~lY~~v~p~~l~pD~dLn~k~~RL~DP~~~~~~~~VN~tt~~e~LlK~~~~~Ffksk~~~~~r~  562 (657)
T COG5117         483 ATLYGKENYDLGGFVDLLYSMVHPMNLEPDADLNLKIKRLKDPDAPSKPFVVNATTDNEELLKIVRLLFFKSKQPVHRRH  562 (657)
T ss_pred             hhhhhhccccHHHHHHHHHHHhCcccCCcchhhhhhhhhhcCCcccccCccccccccHHHHHHHHHHHheeccCchHHHH
Confidence            4     7999999999999976441111                          1234677777754 678888788999


Q ss_pred             HHHHHHHHHHhhcCChhHHHHHHHHHHHHHHhCccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCC
Q 010906          284 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDD  363 (497)
Q Consensus       284 AAFiKRLlqlaL~~pp~~~l~iL~lI~nLLkrhP~l~~Ll~~~~~~~~~~~~~~~eg~~~d~~~~~~~~~~~~~~d~Ydp  363 (497)
                      .+|-|||+-.|.+.|..++.++|.++..|+.|+|.|..+..++.+                           .|.|.|+|
T Consensus       563 ~~f~krl~~c~s~~pe~~~~ail~~~~kl~~rys~~s~l~~sE~~---------------------------ig~g~~~~  615 (657)
T COG5117         563 VIFKKRLLYCCSRSPEEFKGAILDISAKLDIRYSDCSNLKCSEFD---------------------------IGAGNVDS  615 (657)
T ss_pred             HHHHHHHHHHHccChHHHHHHHHHHHHHHHhhhhhccCccCchhh---------------------------cCCccccc
Confidence            999999999999999999999999999999999999999988765                           57899999


Q ss_pred             CCCCCcCCCCCcccHHHHHHHhhccChHHHHHHHHhhcc
Q 010906          364 EESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLEND  402 (497)
Q Consensus       364 ~~~DP~~~nA~~SsLWEL~~L~~HyHPsVa~~A~~l~~g  402 (497)
                      ...||..+|.....|||-.+|.+||+|.|.+-|+.++..
T Consensus       616 ~~~nP~~SN~~tA~l~e~fLlk~hy~P~Vsq~~k~L~~~  654 (657)
T COG5117         616 IPSNPDLSNSSTAVLFEYFLLKQHYSPAVSQSAKELLKS  654 (657)
T ss_pred             CCCCcccCCchhHHHHHHHHHHhhcCHHhHHHHHHHHhh
Confidence            999999999999999999999999999999999998753

>KOG2153 consensus Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.79  E-value=3.4e-19  Score=191.82  Aligned_cols=222  Identities=18%  Similarity=0.204  Sum_probs=175.0

Q ss_pred             HHHHHHHHhccCCCChhHHHHHHHHhhhhhhcccCChhhHhhHHHHHhhc------CCchHHHHHHHHHHHHHh----cC
Q 010906          169 KFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDI------GGVVSVMALSSLFILMTQ----HG  238 (497)
Q Consensus       169 ~~~~awL~~L~~~l~~~l~k~vL~~L~k~i~pHl~np~ll~DFlt~~~d~------gg~isllAL~~LF~L~~~----~n  238 (497)
                      ..+.+|+.+|+...-. ++..+|+||++  +.|++|++++.|++...-++      +...+++|++++|.|++.    .|
T Consensus       460 iVFtiYFrILkn~~~t-ll~~vlEGlak--f~h~invef~~dll~vlk~ll~d~~~~~re~l~cvqtaf~IlS~qg~~ln  536 (704)
T KOG2153|consen  460 IVFTIYFRILKNDRYT-LLGAVLEGLAK--FAHLINVEFLGDLLKVLKELLEDIELSYREALLCVQTAFCILSGQGEKLN  536 (704)
T ss_pred             HHHHHHHHHHhcchhh-HHHHHHhhHHH--HhhhccHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccceeec
Confidence            4455899999876666 99999999999  99999999999998765532      346789999999999985    68


Q ss_pred             CCcchHHHHHHHhhCcCcccch--hHHHHHHHHHHHh-cCCCChHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHh
Q 010906          239 LEYPNFYEKLYALLVPSIFMAK--HRAKFFELLDSCL-RSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRR  315 (497)
Q Consensus       239 ld~~rFY~~LY~LLdp~l~~s~--~ra~fl~LL~~~L-ks~~lp~~rVAAFiKRLlqlaL~~pp~~~l~iL~lI~nLLkr  315 (497)
                      +|+.+||.+||+++-|--....  --.+.+++++..+ +... |..+|.+|++||+..+++.-+...+    .+...+..
T Consensus       537 iD~~~fv~~lY~~l~~~~~~~~~~~~~~ilr~~d~~~~k~r~-~v~~~~~~~~~Ll~~~~h~~~~s~~----~s~~~~~~  611 (704)
T KOG2153|consen  537 IDLGKFVDHLYKMLFPMNLGPDDDGFAIILRLLDPLLIKIRK-PVVNVITKMERLLKCSLHVFFNSKL----ISKYRDIE  611 (704)
T ss_pred             cCHHHHHHHHHHHhcccccCCCcchHHHHHHHhhHhhhhhhh-hHHHHHHHHHHHHHHHHHHhhcccc----hHHHHHHH
Confidence            9999999999998766222222  2357889998874 5555 8888999999999999998877666    56777788


Q ss_pred             CccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCCCCCCCcCCCCCcccHHHHHHHhhccChHHHHH
Q 010906          316 HPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRF  395 (497)
Q Consensus       316 hP~l~~Ll~~~~~~~~~~~~~~~eg~~~d~~~~~~~~~~~~~~d~Ydp~~~DP~~~nA~~SsLWEL~~L~~HyHPsVa~~  395 (497)
                      .+.|..|+.++                                        -|+||++....|||+.+++  |||.|+.+
T Consensus       612 fsk~~~~~~~~----------------------------------------~pe~~s~a~~al~e~~l~r--y~~~~~~~  649 (704)
T KOG2153|consen  612 FSKRLNLLDSE----------------------------------------TPEYCSIASLALFEKLLLR--YHPISRLM  649 (704)
T ss_pred             hhhhhhhhhcc----------------------------------------CccccccccHHHHHHHHHh--cchHHHHH
Confidence            88887776432                                        1999999999999999999  99999999


Q ss_pred             HHHhhccccccccccccccCcCCCCcHHHHHHHHHhcccCCCCcccccCCCccccCCCCCCCceeccCCccC
Q 010906          396 VLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEE  467 (497)
Q Consensus       396 A~~l~~g~~~~~~~~~y~~~dfld~s~~~~ld~e~~k~~k~~p~~~~~~~p~~lf~~~d~~~~~F~~~~~~~  467 (497)
                      |..+.-|.+.      |.         ...++.|+++.           ....||.+ +...|+|+|+|+..
T Consensus       650 a~~~~~G~~~------~~---------~~a~~p~~s~~-----------sa~~L~~~-~~~~~~~~P~v~~~  694 (704)
T KOG2153|consen  650 ASEIAIGVGA------TG---------EGALPPELSNL-----------SAAELFEQ-DLLEMHYNPTVPLS  694 (704)
T ss_pred             HHHHhhcCCc------cC---------cCCCCccccCc-----------hHHHHhhh-HHHHhccCCCCCch
Confidence            9999988875      11         22334444443           45678877 88899999999843

>KOG2153 consensus Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.93  E-value=2.4e-05  Score=86.04  Aligned_cols=146  Identities=24%  Similarity=0.323  Sum_probs=108.6

Q ss_pred             HHHHHHHHhcCCC--cchHHHHHHHhhCcCcccch--------hHHHHHHHH-HHHhcCCCChHHHHHHHHHHHHHHhhc
Q 010906          228 SSLFILMTQHGLE--YPNFYEKLYALLVPSIFMAK--------HRAKFFELL-DSCLRSPLLPAYLAAAFVKKLSRLSIL  296 (497)
Q Consensus       228 ~~LF~L~~~~nld--~~rFY~~LY~LLdp~l~~s~--------~ra~fl~LL-~~~Lks~~lp~~rVAAFiKRLlqlaL~  296 (497)
                      ..+|.++-..|++  -+.||. +-+++||-+...+        .+-+++.+. ..+-.+..+..+|..+|-||+.-++.+
T Consensus       544 ~~lY~~l~~~~~~~~~~~~~~-ilr~~d~~~~k~r~~v~~~~~~~~~Ll~~~~h~~~~s~~~s~~~~~~fsk~~~~~~~~  622 (704)
T KOG2153|consen  544 DHLYKMLFPMNLGPDDDGFAI-ILRLLDPLLIKIRKPVVNVITKMERLLKCSLHVFFNSKLISKYRDIEFSKRLNLLDSE  622 (704)
T ss_pred             HHHHHHhcccccCCCcchHHH-HHHHhhHhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhhhhhhhhcc
Confidence            3455555544444  345554 3356666322211        122333332 234456778999999999999999999


Q ss_pred             CChhHHHHHHHHHHHHHHhCccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCCCCCCCcCCCCCcc
Q 010906          297 VPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRS  376 (497)
Q Consensus       297 ~pp~~~l~iL~lI~nLLkrhP~l~~Ll~~~~~~~~~~~~~~~eg~~~d~~~~~~~~~~~~~~d~Ydp~~~DP~~~nA~~S  376 (497)
                      .|-...++.++|+-.+|-|++.+-.++..+..                           .|.+.|.+...+|+.+|...+
T Consensus       623 ~pe~~s~a~~al~e~~l~ry~~~~~~~a~~~~---------------------------~G~~~~~~~a~~p~~s~~sa~  675 (704)
T KOG2153|consen  623 TPEYCSIASLALFEKLLLRYHPISRLMASEIA---------------------------IGVGATGEGALPPELSNLSAA  675 (704)
T ss_pred             CccccccccHHHHHHHHHhcchHHHHHHHHHh---------------------------hcCCccCcCCCCccccCchHH
Confidence            99999999999999999988888777765543                           578899999999999999999


Q ss_pred             cHHHHHHHhhccChHHHHHHHHhhc
Q 010906          377 SLWEIDTLRHHYCPPVSRFVLSLEN  401 (497)
Q Consensus       377 sLWEL~~L~~HyHPsVa~~A~~l~~  401 (497)
                      .|||-.+++.||+|+|..-++.+..
T Consensus       676 ~L~~~~~~~~~~~P~v~~~~kql~~  700 (704)
T KOG2153|consen  676 ELFEQDLLEMHYNPTVPLSLKQLYK  700 (704)
T ss_pred             HHhhhHHHHhccCCCCCchHHHHHH
Confidence            9999999999999999988777654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	497
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.8 bits (136), Expect = 1e-08
 Identities = 63/422 (14%), Positives = 123/422 (29%), Gaps = 121/422 (28%)

Query: 34  VTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENS------------- 80
           ++ F    +    D +      ++ + +S+  K   D    S D  S             
Sbjct: 22  LSVFE-DAFVDNFDCKD-----VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQ 75

Query: 81  ESHSRASIELSLRKSY-YILSKI------PSMEDNNEKSEHEMWSGSGSSSEEGNLKEAS 133
           E   +  +E  LR +Y +++S I      PSM       + +          + N+    
Sbjct: 76  EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ 135

Query: 134 KKSKTKVKMPKAEKSNN----------NSCLQALSAAIISKKMKSKFTK--AWITFLRLP 181
              K +  + +   + N           + + AL   + S K++ K      W+      
Sbjct: 136 PYLKLRQALLELRPAKNVLIDGVLGSGKTWV-ALDVCL-SYKVQCKMDFKIFWLNLKNCN 193

Query: 182 LPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEY 241
            P  + + +   L++    + S      +   R + I        L  L          Y
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA-----ELRRLLKSK-----PY 243

Query: 242 PNFYEKLYALLV------PSIFMAKHRAKFFELLDSC----------------------- 272
            N       LLV         + A      F L  SC                       
Sbjct: 244 EN------CLLVLLNVQNAKAWNA------FNL--SCKILLTTRFKQVTDFLSAATTTHI 289

Query: 273 ----LRSPLLPAYLAAAFVKKLS-RLSILVPP---SGALVIMALIHNLLRRHPSINCLLH 324
                   L P  + +  +K L  R   L P    +     +++I   +R   +      
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDL-PREVLTTNPRRLSIIAESIRDGLA------ 342

Query: 325 REDGNETHNDDSKAEKEIVDAATVANISSIKPGI--DHFDD----EESNPVKSNAMRSSL 378
             D  +  N D      I++++    ++ ++P      FD       S  + +  + S +
Sbjct: 343 TWDNWKHVNCDKL--TTIIESS----LNVLEPAEYRKMFDRLSVFPPSAHIPTILL-SLI 395

Query: 379 WE 380
           W 
Sbjct: 396 WF 397

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 3e-04
 Identities = 62/341 (18%), Positives = 104/341 (30%), Gaps = 108/341 (31%)

Query: 33  SVTDFLASKYFKYIDVRY----FT----------YISMEK------------LARSLEGK 66
            VTDFL++    +I + +     T          Y+                   S+  +
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE 335

Query: 67  GISDDKT---GSADENSESHSRASIELSL--------RKSYYILS------KIPSMEDNN 109
            I D           N +  +   IE SL        RK +  LS       IP      
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTI-IESSLNVLEPAEYRKMFDRLSVFPPSAHIP------ 388

Query: 110 EKSEHEMWSGSGSSSEEGNLKEASKKS-------KTKVKMP----KAEKSNNNSCLQALS 158
                 +W     S     + +  K S       ++ + +P    + +    N    AL 
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN--EYALH 446

Query: 159 AAIISKKMKSKFTKAWITFLRLPLPVDIY-------------KEVLVTLHRAVIPFLSNP 205
            +I+         K + +   +P  +D Y                 +TL R V  FL   
Sbjct: 447 RSIVDHY---NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV--FLD-- 499

Query: 206 IMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEK-------LYALLVPSI-- 256
                FL +        +  A  S+   + Q  L+   FY+         Y  LV +I  
Sbjct: 500 ---FRFLEQKIRHDS-TAWNASGSILNTLQQ--LK---FYKPYICDNDPKYERLVNAILD 550

Query: 257 FMAKH-----RAKFFELLDSCLRSPLLPAYLAAAFVKKLSR 292
           F+ K       +K+ +LL   L +     +  A   K++ R
Sbjct: 551 FLPKIEENLICSKYTDLLRIALMAEDEAIFEEAH--KQVQR 589

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00