Citrus Sinensis ID: 010967


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490------
MEPVLIESNVNGASEVHNNNNANVDHGWQKVTYAKRQRKTKPGADPSNALVAANGGAGSSGEKNNVFRNLEQQAEERHLRIIGARQAALSAAASESAPARSKHRSDDEYDEDSDADVAAAENGKAEEPKKPKQKKPKKPKITVAEAAAKLDATDLSAFLIDISGTYEDKQDIQMMRFADYFGRAFSGVTASQFPWMKIFRESTVAKMADIPLSQIPDVVYKTSIDWINQRSPEVLGSFVLWCLDSILADVETHNVSSKASKKVVQQASSKSQVAIFVALAMVLRRKPDVLIGVLPALRENAKYQGQDKLPVIVWMIAQASQGELAVGLYSWAHNLLPIVGGKNCNPQSRDIILQLVERILSSPKARTILVNGAVRKGERLVPPSALETLLRLTFPTSSARVKATERFEAIYPTLKEVALAGVPGSKAMKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWVSYSHQTLYADTRWFLHFPLWPAM
ccccccccccccccccccccccccccccEEEEccccccccccccccccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHcccccccccccccccccccccHHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccHHHHccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccccHHHccccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccc
ccccEEEEEEcccEEEccccccccccccEEEEccHHHccccccccHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHcccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccHHHHcccccHHHHcccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHcHHHHHccHHccccccHHHHHHHHHHcHccHHHHHHHHHHHHcHHHccccccHHHHHHHHHHHHHHHccccccEEEEcccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccEEEEcccccccc
mepvliesnvngasevhnnnnanvdhgwQKVTYAKrqrktkpgadpsnalvaanggagssgeknNVFRNLEQQAEERHLRIIGARQAALSAAasesaparskhrsddeydedsdaDVAAaengkaeepkkpkqkkpkkpkiTVAEAAAKLDATDLSAFLIDisgtyedkqdIQMMRFADYFGrafsgvtasqfpwmKIFRESTVAKmadiplsqipdvvYKTSIDWinqrspevLGSFVLWCLDSILADvethnvsskaSKKVVQQASSKSQVAIFVALAMVLRRKPDVLIGVLPALRenakyqgqdklPVIVWMIAQASQGELAVGLYSWAhnllpivggkncnpqSRDIILQLVERILSSPKARTILVNgavrkgerlvppsaLETLLrltfptssarVKATERFEAIYPTLKEValagvpgskamKQVSLQILSFAIKFagestpdlsneaAGIFIWCLTQSADCYKHWVSYShqtlyadtrwflhfplwpam
MEPVLIESNVNGAsevhnnnnanvdhgwQKVTYAKRQRktkpgadpsnALVAANggagssgekNNVFRNLEQQAEERHLRIIGARQAALSaaasesaparskhrsddeydeDSDADVAAaengkaeepkkpkqkkpkkpkITVAEAAAKLDATDLSAFLIDISGTYEDKQDIQMMRFADYFGRAFSGVTASQFPWMKIFRESTVAKMadiplsqipdVVYKTSIDWINQRSPEVLGSFVLWCLDSILADVETHNVSSKASKKvvqqassksQVAIFVALAMVLRRKPDVLIGVLPALRENAKYQGQDKLPVIVWMIAQASQGELAVGLYSWAHNLLPIVGGKNCNPQSRDIILQLVERilsspkartilvngavrkgerlvppsaletllrltfptssarvKATERFEAIYPTLKEVALAGVPGSKAMKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWVSYSHQTLYADTRWFLHFPLWPAM
MEPVLIESNVNGASEVHNNNNANVDHGWQKVTYAKRQRKTKPGADPSNALVAANGGAGSSGEKNNVFRNLEQQAEERHLRIIGarqaalsaaasesaparsKHRSddeydedsdadvaaaeNGKAEEpkkpkqkkpkkpkITVAEAAAKLDATDLSAFLIDISGTYEDKQDIQMMRFADYFGRAFSGVTASQFPWMKIFRESTVAKMADIPLSQIPDVVYKTSIDWINQRSPEVLGSFVLWCLDSILADVETHNvsskaskkvvqqassksqvaIFVALAMVLRRKPDVLIGVLPALRENAKYQGQDKLPVIVWMIAQASQGELAVGLYSWAHNLLPIVGGKNCNPQSRDIILQLVERILSSPKARTILVNGAVRKGERLVPPSALETLLRLTFPTSSARVKATERFEAIYPTLKEVALAGVPGSKAMKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWVSYSHQTLYADTRWFLHFPLWPAM
*************************************************************************************************************************************************AAAKLDATDLSAFLIDISGTYEDKQDIQMMRFADYFGRAFSGVTASQFPWMKIFR*****************VVYKTSIDWINQRSPEVLGSFVLWCLDSILADVETH******************QVAIFVALAMVLRRKPDVLIGVLPALRENAKYQGQDKLPVIVWMIAQASQGELAVGLYSWAHNLLPIVGGKNCNPQSRDIILQLVERILSSPKARTILVNGAVRKGERLVPPSALETLLRLTFPTSSARVKATERFEAIYPTLKEVALAGVPGSKAMKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWVSYSHQTLYADTRWFLHFPLW***
****LIE*NVNG************DHGW***********************************************************************************************************************AKLDATDLSAFLIDISGTYEDKQDIQMMRFADYFGRAFSGVTASQFPWMKIFRESTVAKMADIPLSQIPDVVYKTSIDWINQRSPEVLGSFVLWCLDSILADVE*************QQASSKSQVAIFVALAMVLRRKPDVLIGVLPALRE****QGQDKLPVIVWMIAQASQGELAVGLYSWAHNLLPIVGGKNCNPQSRDIILQLVERILSSPKARTILVNGAVRKGERLVPPSALETLLRLTFP*************AIYPTLKEVALAGVPGSKAMKQVSLQILSFAIKFA****PDLSNEAAGIFIWCLTQSADCYKHWVSYSHQTLYADTRWFLHFPLWPA*
MEPVLIESNVNGASEVHNNNNANVDHGWQKVTY***********DPSNALVAANGGAGSSGEKNNVFRNLEQQAEERHLRIIGAR********************************************************TVAEAAAKLDATDLSAFLIDISGTYEDKQDIQMMRFADYFGRAFSGVTASQFPWMKIFRESTVAKMADIPLSQIPDVVYKTSIDWINQRSPEVLGSFVLWCLDSILADVET******************SQVAIFVALAMVLRRKPDVLIGVLPALRENAKYQGQDKLPVIVWMIAQASQGELAVGLYSWAHNLLPIVGGKNCNPQSRDIILQLVERILSSPKARTILVNGAVRKGERLVPPSALETLLRLTFPTSSARVKATERFEAIYPTLKEVALAGVPGSKAMKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWVSYSHQTLYADTRWFLHFPLWPAM
*EPVLIESNVNGASEVHNNNNANVDHGWQKVTYAKRQR*******************************************IGARQAALSA***********************************************PKITVAEAAAKLDATDLSAFLIDISGTYEDKQDIQMMRFADYFGRAFSGVTASQFPWMKIFRESTVAKMADIPLSQIPDVVYKTSIDWINQRSPEVLGSFVLWCLDSILADVET****************SKSQVAIFVALAMVLRRKPDVLIGVLPALRENAKYQGQDKLPVIVWMIAQASQGELAVGLYSWAHNLLPIVGGKNCNPQSRDIILQLVERILSSPKARTILVNGAVRKGERLVPPSALETLLRLTFPTSSARVKATERFEAIYPTLKEVALAGVPGSKAMKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWVSYSHQTLYADTRWFLHFPLWPA*
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MEPVLIESNVNGASEVHNNNNANVDHGWQKVTYAKRQRKTKPGADPSNALVAANGGAGSSGEKNNVFRNLEQQAEERHLRIIGARQAALSAAASESAPARSKHRSDDEYDEDSDADVAAAENGKAEEPKKPKQKKPKKPKITVAEAAAKLDATDLSAFLIDISGTYEDKQDIQMMRFADYFGRAFSGVTASQFPWMKIFRESTVAKMADIPLSQIPDVVYKTSIDWINQRSPEVLGSFVLWCLDSILADVETHNVSSKASKKVVQQASSKSQVAIFVALAMVLRRKPDVLIGVLPALRENAKYQGQDKLPVIVWMIAQASQGELAVGLYSWAHNLLPIVGGKNCNPQSRDIILQLVERILSSPKARTILVNGAVRKGERLVPPSALETLLRLTFPTSSARVKATERFEAIYPTLKEVALAGVPGSKAMKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWVSYSHQTLYADTRWFLHFPLWPAM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query496 2.2.26 [Sep-21-2011]
A1L2I9 679 Transmembrane protein 214 N/A no 0.633 0.462 0.225 2e-08
A0JMW6 681 Transmembrane protein 214 N/A no 0.342 0.249 0.251 3e-06
Q6NUQ4 689 Transmembrane protein 214 yes no 0.600 0.432 0.230 5e-05
A4FV45 687 Transmembrane protein 214 yes no 0.526 0.379 0.233 0.0002
>sp|A1L2I9|T214B_XENLA Transmembrane protein 214-B OS=Xenopus laevis GN=tmem214-b PE=2 SV=1 Back     alignment and function desciption
 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/377 (22%), Positives = 135/377 (35%), Gaps = 63/377 (16%)

Query: 107 DEYDEDSDADVAAAENGKAEEPKK----PKQKKP-------KKPKITVAEAAAK-LDATD 154
           D   +  + +     N  +E+P+K    P +KKP       K+ K    E A K LD  +
Sbjct: 55  DRIHKKQNKEQVPPNNMSSEQPQKQQQNPGKKKPQSGDSVCKQSKFHTLECALKALDVAE 114

Query: 155 LSAFLIDISGTYEDKQDIQMMRFADYFGRAFSGVTASQFPWMKIFRESTVAKMADIPLSQ 214
           L   L      + +   I +   A Y       V            +  + +  D P   
Sbjct: 115 LQRDLEKSQNMFPENPSIWVKDLAGYLNYKLQTVK----------NDVLIQQSHDYPYCL 164

Query: 215 IPDVVYKTSIDWINQRSPEVLGSFVLWCLDSILADVETHNVSSKASKKVVQQASSKSQVA 274
           I   + K  +  +  ++P VL   V  C+ S+L +++     S    ++  QA       
Sbjct: 165 INKEL-KGIVRSLLAKAPHVLDVMVDHCIFSMLQELDKPTGESLHGYRICIQA------- 216

Query: 275 IFVALAMVLRRKPDVLIGVLPALRE--NAKYQGQDKLPVIVWMIAQASQGELAVGLYSWA 332
                  VL  KP  +   LP   E   +      K   ++W + QA   +   GL  W 
Sbjct: 217 -------VLLDKPKTVTSNLPKYLELLRSHLNRPMKCLTVMWAVGQAGFTDFTEGLKVWL 269

Query: 333 HNLLPIVGGKNCNPQSRDIILQLVERILSSPKARTILVNGAVRKGERLVPPSALETLLRL 392
             + P++G KN  P +   IL L          R +L +  + KG  ++ P     +L  
Sbjct: 270 GLMFPVLGVKNLTPYA---ILYL---------DRLLLAHSNLTKGFGMIGPKDFFPILDF 317

Query: 393 TF-PTSSARVKATERFEAIYPTLKEVALAGVPGSKAMKQVSLQILSFAIKFAGESTPDLS 451
            F P +S      E    +YP LK +AL   P S         + ++   F   +TP   
Sbjct: 318 AFMPNNSLTPSQQENLRNLYPKLKVLALGATPEST--------LHTYFPSFLSRATPSCP 369

Query: 452 NEAAGIFIWCLTQSADC 468
            E     I  LT   DC
Sbjct: 370 AEMRKELIHSLT---DC 383





Xenopus laevis (taxid: 8355)
>sp|A0JMW6|T214A_XENLA Transmembrane protein 214-A OS=Xenopus laevis GN=tmem214-a PE=2 SV=1 Back     alignment and function description
>sp|Q6NUQ4|TM214_HUMAN Transmembrane protein 214 OS=Homo sapiens GN=TMEM214 PE=1 SV=2 Back     alignment and function description
>sp|A4FV45|TM214_BOVIN Transmembrane protein 214 OS=Bos taurus GN=TMEM214 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query496
255573742589 conserved hypothetical protein [Ricinus 0.929 0.782 0.690 1e-175
225424297594 PREDICTED: uncharacterized protein LOC10 0.935 0.781 0.661 1e-170
147814802594 hypothetical protein VITISV_007906 [Viti 0.935 0.781 0.661 1e-170
449449042591 PREDICTED: uncharacterized protein LOC10 0.901 0.756 0.699 1e-168
224099505567 predicted protein [Populus trichocarpa] 0.883 0.772 0.662 1e-159
334182786 615 uncharacterized protein [Arabidopsis tha 0.949 0.765 0.614 1e-158
356525068 599 PREDICTED: uncharacterized protein LOC10 0.901 0.746 0.659 1e-157
356512296 597 PREDICTED: uncharacterized protein LOC10 0.909 0.755 0.663 1e-156
297841825 616 hypothetical protein ARALYDRAFT_476207 [ 0.927 0.746 0.621 1e-155
224111486594 predicted protein [Populus trichocarpa] 0.891 0.744 0.685 1e-155
>gi|255573742|ref|XP_002527792.1| conserved hypothetical protein [Ricinus communis] gi|223532827|gb|EEF34602.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  620 bits (1598), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 325/471 (69%), Positives = 379/471 (80%), Gaps = 10/471 (2%)

Query: 6   IESNVNGASEVHN-NNNANVDHGWQKVTYAKRQRKTKPGADPSNALVAANG---GAGSSG 61
            ESN+N  +E H   NN N DHGWQKVTYAKRQRK KP AD + A+   NG   G  ++ 
Sbjct: 4   FESNINNNNEDHQITNNHNTDHGWQKVTYAKRQRKQKP-ADTAAAVT--NGKINGTAAAN 60

Query: 62  EKNNVFRNLEQQAEERHLRIIGARQAALSAAASESAPARSKHRSDDEYDEDSDADVAAAE 121
           +K NVFR+LEQQ+EER  RII +++AA      E+AP RSKH   D+ +ED D     A+
Sbjct: 61  DKANVFRSLEQQSEERRRRIIESQRAA---DVPEAAPVRSKHHRSDDDEEDDDDSEDGAK 117

Query: 122 NGKAEEPKKPKQKKPKKPKITVAEAAAKLDATDLSAFLIDISGTYEDKQDIQMMRFADYF 181
             +    KK KQKK KKPK+TVAEAA K+DA+DL+AFL +IS +YE +Q+I +MRFADYF
Sbjct: 118 GNEKAAEKKVKQKKAKKPKVTVAEAAVKIDASDLAAFLAEISESYEGQQEIMLMRFADYF 177

Query: 182 GRAFSGVTASQFPWMKIFRESTVAKMADIPLSQIPDVVYKTSIDWINQRSPEVLGSFVLW 241
           GRAFS V+++QFPW+K+FRE++VAKMADIPLS I D VYKTSIDWINQR+ E LGSFVLW
Sbjct: 178 GRAFSSVSSAQFPWVKLFRENSVAKMADIPLSHISDAVYKTSIDWINQRTIEALGSFVLW 237

Query: 242 CLDSILADVETHNVSSKASKKVVQQASSKSQVAIFVALAMVLRRKPDVLIGVLPALRENA 301
            LD IL D+ +    SK SKK VQQ SSKSQV +FV LAMVLRRKPD L+ VLP LR+++
Sbjct: 238 SLDCILHDLSSQQTGSKVSKKGVQQVSSKSQVGMFVVLAMVLRRKPDALVNVLPTLRDSS 297

Query: 302 KYQGQDKLPVIVWMIAQASQGELAVGLYSWAHNLLPIVGGKNCNPQSRDIILQLVERILS 361
           KYQGQDKLPV+ WMIAQ SQG+LAVGLY+WAHNL P+V GK+ NPQSRDIILQLVE+ILS
Sbjct: 298 KYQGQDKLPVVAWMIAQVSQGDLAVGLYAWAHNLFPLVSGKSSNPQSRDIILQLVEKILS 357

Query: 362 SPKARTILVNGAVRKGERLVPPSALETLLRLTFPTSSARVKATERFEAIYPTLKEVALAG 421
           SPKARTILV+GAVRKGERLVPP ALE LLR+TFPTSSARVKATERFEAIYPTLK+VALAG
Sbjct: 358 SPKARTILVSGAVRKGERLVPPFALEILLRVTFPTSSARVKATERFEAIYPTLKDVALAG 417

Query: 422 VPGSKAMKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHW 472
             GSKAMKQVSLQIL+FA K AGES P+LS EAAGI IWCLTQ+A+CYKHW
Sbjct: 418 SVGSKAMKQVSLQILNFAFKAAGESNPELSKEAAGICIWCLTQNAECYKHW 468




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424297|ref|XP_002284658.1| PREDICTED: uncharacterized protein LOC100264607 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147814802|emb|CAN67931.1| hypothetical protein VITISV_007906 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449449042|ref|XP_004142274.1| PREDICTED: uncharacterized protein LOC101205264 [Cucumis sativus] gi|449510363|ref|XP_004163644.1| PREDICTED: uncharacterized protein LOC101224709 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224099505|ref|XP_002311510.1| predicted protein [Populus trichocarpa] gi|222851330|gb|EEE88877.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|334182786|ref|NP_001185070.1| uncharacterized protein [Arabidopsis thaliana] gi|332192230|gb|AEE30351.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356525068|ref|XP_003531149.1| PREDICTED: uncharacterized protein LOC100795409 isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|356512296|ref|XP_003524856.1| PREDICTED: uncharacterized protein LOC100777797 isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|297841825|ref|XP_002888794.1| hypothetical protein ARALYDRAFT_476207 [Arabidopsis lyrata subsp. lyrata] gi|297334635|gb|EFH65053.1| hypothetical protein ARALYDRAFT_476207 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224111486|ref|XP_002315874.1| predicted protein [Populus trichocarpa] gi|222864914|gb|EEF02045.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query496
TAIR|locus:2013955 610 AT1G70770 "AT1G70770" [Arabido 0.949 0.772 0.546 5.7e-130
TAIR|locus:2081566443 AT3G11880 "AT3G11880" [Arabido 0.649 0.726 0.475 1.8e-71
TAIR|locus:2060969156 AT2G18070 "AT2G18070" [Arabido 0.118 0.378 0.424 0.0002
TAIR|locus:2013955 AT1G70770 "AT1G70770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
 Identities = 267/489 (54%), Positives = 323/489 (66%)

Query:     1 MEPVLIES-NVNGASEVHNNNNANVDHGWQKVTYAKRQRKTKPGADPSNA----LVAANG 55
             M+P  IES   NG       +N NVDHGW+KV Y KR RK K  AD + A     VA+NG
Sbjct:     1 MDP--IESVEYNG----FETSNGNVDHGWKKVVYPKRHRKQKQ-ADQATANGGKTVASNG 53

Query:    56 GAGSSGEKNNVFRNLEQQAEERHLRIIGXXXXXXXXXXXXXXXXXXKHRSXXXXXXXXXX 115
                + G+  NVFR+LE+QAE+R  RI+                   KHRS          
Sbjct:    54 TVANGGD--NVFRSLEEQAEDRRRRILAAKMTAIDSDDDGVVRS--KHRSNGYGDDGYDF 109

Query:   116 XXXXXXNG--KAEEXXXXXXXXXXXXXITVAEAAAKLDATDLSAFLIDISGTYEDKQDIQ 173
                       K EE             +++ EAA+K+D  +L AFL++ S +Y  + +IQ
Sbjct:   110 DGSDDEIATLKVEEVKKPKPKKEKKPKVSLPEAASKIDPLNLEAFLVEASESYASQPEIQ 169

Query:   174 MMRFADYFGRAFSGVTASQFPWMKIFRESTVAKMADIPLSQIPDVVYKTSIDWINQRSPE 233
             +MRFADYFGRA SGV++ QFPW+K+F+ES ++K+ ++PL+ IP+ VYKTS+DWIN R  E
Sbjct:   170 LMRFADYFGRALSGVSSVQFPWVKMFKESPLSKLIEVPLAHIPEPVYKTSVDWINHRPIE 229

Query:   234 VLGSFVLWCLDSILADVETHNXXXXXXXXXXXXXXXXXXXXIFVALAMVLRRKPDVLIGV 293
              LG+FVLW  D IL D+                        IFVALAMVLRRKPD L  V
Sbjct:   230 ALGAFVLWAFDCILTDLAAQQGGAKGGKKGGQQTTSKSQVAIFVALAMVLRRKPDALTNV 289

Query:   294 LPALRENAKYQGQDKLPVIVWMIAQASQGELAVGLYSWAHNLLPIVGGKNCNPQSRDIIL 353
             LP LREN KYQGQDKLPV VWM+AQASQG++AVGLYSWAHNLLP+VG KNCNPQSRD+IL
Sbjct:   290 LPTLRENPKYQGQDKLPVTVWMMAQASQGDIAVGLYSWAHNLLPVVGNKNCNPQSRDLIL 349

Query:   354 QLVERILSSPKARTILVNGAVRKGERLVPPSALETLLRLTFPTSSARVKATERFEAIYPT 413
             QLVE+IL++PKARTILVNGAVRKGERL+PP + E LLRLTFP SSARVKATERFEAIYP 
Sbjct:   350 QLVEKILTNPKARTILVNGAVRKGERLIPPPSFEILLRLTFPASSARVKATERFEAIYPL 409

Query:   414 LKEVALAGVPGSKAMKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWV 473
             LKEVALAG PGSKAMKQV+ QI +FA+K AGE  P L+ EA  I IW +TQ+ DC KHW 
Sbjct:   410 LKEVALAGAPGSKAMKQVTQQIFTFALKLAGEGNPVLAKEATAIAIWSVTQNFDCCKHWD 469

Query:   474 SYSHQTLYA 482
             +   + L A
Sbjct:   470 NLYKENLEA 478




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006007 "glucose catabolic process" evidence=RCA
GO:0006098 "pentose-phosphate shunt" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA
TAIR|locus:2081566 AT3G11880 "AT3G11880" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060969 AT2G18070 "AT2G18070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_fgenesh4_pm.C_LG_VIII0567
hypothetical protein (568 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query496
pfam10151 469 pfam10151, DUF2359, Uncharacterized conserved prot 0.004
>gnl|CDD|150784 pfam10151, DUF2359, Uncharacterized conserved protein (DUF2359) Back     alignment and domain information
 Score = 39.1 bits (91), Expect = 0.004
 Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 21/154 (13%)

Query: 312 IVWMIAQASQGELAVGLYSWAHNLLPIVGGKNCNPQSRDIILQLVERILSSPKARTILVN 371
           I+W + QA    L  GL  W   +LP++G K  +P +   I  L          R +L++
Sbjct: 42  IMWALGQAGFTNLTQGLRVWLGIMLPVLGVKALSPYA---IAYL---------ERLLLLH 89

Query: 372 GAVRKGERLVPPSALETLLRLTF-PTSSARVKATERFEAIYPTLKEVALAGVPGSKAMKQ 430
             + KG  ++ P     LL   F P +S      E+   +YP LK +A    P S     
Sbjct: 90  DNLTKGFGMLGPKDFFPLLDFAFMPNNSLSPSLQEQLCRLYPRLKVLAFGAKPES----- 144

Query: 431 VSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQ 464
            +L   ++   F   +TP    E     +  LT+
Sbjct: 145 -TLH--TYFPSFLSRATPSCPAEMKKELLDSLTE 175


This is a 450 amino acid region of a family of proteins conserved from insects to humans. The mouse protein, Q8BM55, is annotated as being a putative Vitamin K-dependent carboxylation gamma-carboxyglutamic (GLA) domain containing protein, but this could not be confirmed. The function is not known. Length = 469

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 496
KOG4467 557 consensus Uncharacterized conserved protein [Funct 100.0
PF10151 469 DUF2359: Uncharacterised conserved protein (DUF235 100.0
>KOG4467 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=2.2e-155  Score=1167.62  Aligned_cols=434  Identities=60%  Similarity=0.883  Sum_probs=419.8

Q ss_pred             CCCcceeecccCccccccCCCCCCCCCceeeehhhhhcCCCCCCCCcc---cccccCCCCCCCCCCchhhHHHHHhHHHH
Q 010967            1 MEPVLIESNVNGASEVHNNNNANVDHGWQKVTYAKRQRKTKPGADPSN---ALVAANGGAGSSGEKNNVFRNLEQQAEER   77 (496)
Q Consensus         1 ~~~~~ie~~~~~~~~~~~~~~~~~dhGWqkVt~~Kr~rk~~~~~~~~~---~~~~~~g~~~~~~~~~~vf~~le~~ae~r   77 (496)
                      |.|  ||+..|++++   +.++++||||+||+||||+|||||+|++++   .-+++||| ++||+ .|||||||.|||+|
T Consensus         1 mdp--iesveynGFe---t~ngn~dhgWkkvvyPkr~rkqk~adqa~a~gg~t~~~ngt-~~ngg-~nvfrSLeeqAe~r   73 (557)
T KOG4467|consen    1 MDP--IESVEYNGFE---TLNGNDDHGWKKVVYPKRNRKQKPADQAAALGGVTLIPNGT-LSNGG-GNVFRSLEEQAETR   73 (557)
T ss_pred             CCh--HHhhhhcccc---ccCCCcccceeeeecccccccccchhhhhhcCCceeccCcc-ccCCC-cchhhcccHHHHHH
Confidence            889  9999999999   455669999999999999999999999984   34567998 87766 99999999999999


Q ss_pred             HHHHHHHHHHHHHhhhccCCCccc-CCCCCCCCCCCchhHHHhhhcCCCCCCCCCCCCCCCCCcccHHHHHhcCChhhHH
Q 010967           78 HLRIIGARQAALSAAASESAPARS-KHRSDDEYDEDSDADVAAAENGKAEEPKKPKQKKPKKPKITVAEAAAKLDATDLS  156 (496)
Q Consensus        78 ~~~~~~a~~~a~~~~~~~~~~~~~-~~~~~de~~d~d~~~~~~~~~~~~~e~kk~K~kk~kkpKvsvaeAAakID~sdLa  156 (496)
                      |+||++++..+.++++++..||+| +++++|+++|+||+|++.+ -.|.||.||||+||.||||||+.|||.||||.+|.
T Consensus        74 ~~riLaak~~~~~~d~~~~~rsk~rsnGyGd~GyDFd~sd~eia-~lk~eevkkpkpkk~kkPkvsL~Eaa~kidplnl~  152 (557)
T KOG4467|consen   74 LDRILAAKPNSDTADVSDGGRSKWRSNGYGDIGYDFDDSDSEIA-VLKLEEVKKPKPKKSKKPKVSLQEAACKIDPLNLL  152 (557)
T ss_pred             HHHHHhcCCCccccccccccchhhccccCCccccccCCccchhh-eeeHHHhcccCcccccCCcccHHHHHhccCHHHHH
Confidence            999999999999999999999999 9999999999999988653 47899999999999999999999999999999999


Q ss_pred             HHHHhhhccccccchhhHHHHHhHHhhhccCCcccCCchhhhccccchhhhhccCCCCCChhhhhhhhhhhccCChhhhh
Q 010967          157 AFLIDISGTYEDKQDIQMMRFADYFGRAFSGVTASQFPWMKIFRESTVAKMADIPLSQIPDVVYKTSIDWINQRSPEVLG  236 (496)
Q Consensus       157 afL~~is~sY~~~pdiQLmRFaDYFgrafs~Vss~qfpW~kMfkespl~klidvPL~hIpe~VyktSvdWI~q~~~~aL~  236 (496)
                      +||++.+                                              +||+|||+|||+|++|||||+|+|+|+
T Consensus       153 AFlveas----------------------------------------------~pL~Hipepvyktsadwin~rPiEalg  186 (557)
T KOG4467|consen  153 AFLVEAS----------------------------------------------SPLSHIPEPVYKTSADWINQRPIEALG  186 (557)
T ss_pred             HHhcCCC----------------------------------------------CccccCCcchhhccCCccccCCHHHHH
Confidence            9999876                                              799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhccccccccccccccccccccchHHHHHHHHHHHhcChhHHHhhhhhhhhhccccCCCCchHHHHHH
Q 010967          237 SFVLWCLDSILADVETHNVSSKASKKVVQQASSKSQVAIFVALAMVLRRKPDVLIGVLPALRENAKYQGQDKLPVIVWMI  316 (496)
Q Consensus       237 sFVlW~ln~IL~dL~~qqgg~kg~k~~~q~~s~ksqVaifV~LAMVLR~kP~vL~~vlptlr~~~kyqg~dkLPv~vWmi  316 (496)
                      .||+|.++||+.|+..||||.||||||.||++|||||+|||+||||||++||.|+++|||+|+|+||||||+|||+||||
T Consensus       187 afvlw~~dCil~Dla~qqgg~kggkKg~qQs~Sksqvaifvalamvlr~kPdaltn~LptlrenpKyqgQdkLpvtvwmm  266 (557)
T KOG4467|consen  187 AFVLWLTDCILVDLASQQGGRKGGKKGLQQSSSKSQVAIFVALAMVLRQKPDALTNSLPTLRENPKYQGQDKLPVTVWMM  266 (557)
T ss_pred             HHHHHHHHHHhccHHHHhhhhhhcccccccccchhHHHHHHHHHHHHHhccHHHHHhhHHHHhCccccCcccchHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcchhhHHHHhhhhhhccccCCCCCcchHHHHHHHHHHHhcCcccceeeeccccccCCccCCchHHHHHHHHhCCC
Q 010967          317 AQASQGELAVGLYSWAHNLLPIVGGKNCNPQSRDIILQLVERILSSPKARTILVNGAVRKGERLVPPSALETLLRLTFPT  396 (496)
Q Consensus       317 aQAsqgDL~vGly~WahnLLP~v~gk~~nPqSrDliLQlvE~iLs~pkArtiLvngavrkgerliPP~sfeillR~tFP~  396 (496)
                      +||+|||++||+|+|+|||||+++.++|||||||+||||||+||++|||||||+|||||+|||||||++||||+|+|||+
T Consensus       267 aqasQgDi~vglyswahnLlpVvg~k~cnPqsRdLiLqLVe~il~npkaRtilvngAvrkGeRLipppsFeil~rltfPA  346 (557)
T KOG4467|consen  267 AQASQGDIVVGLYSWAHNLLPVVGPKSCNPQSRDLILQLVEAILLNPKARTILVNGAVRKGERLIPPPSFEILVRLTFPA  346 (557)
T ss_pred             hccccCCeeeeehhhhcccccccCCCCCCchHHHHHHHHHHHHHcCchHhHHhhhhhhhcCccccCCCcchhhhhccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccchhhhhhhHhhhhhhhHHHhcCCCCchhHHHHHHHHHHHHHHHhccCCchhhHhhHhhhhhhcccCchHHHhHHhhh
Q 010967          397 SSARVKATERFEAIYPTLKEVALAGVPGSKAMKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWVSYS  476 (496)
Q Consensus       397 ssaRvKateRfeAiyP~LKevALaG~~gskamkqv~qqif~~slk~age~np~LakEa~~i~IWcLtqn~dc~k~We~ly  476 (496)
                      ||||||||||||||||+||||+|+|.||||+||||+||||+|++|.+||.||.|++||++|.||.+|||+||||||+|+|
T Consensus       347 SsArvKaterfeaiYplLkEv~lagapGSkamkqVtqqiftfAlk~age~np~Lakeaaai~iW~~tqn~Dcckhw~nly  426 (557)
T KOG4467|consen  347 SSARVKATERFEAIYPLLKEVSLAGAPGSKAMKQVTQQIFTFALKHAGETNPFLAKEAAAILIWFGTQNVDCCKHWSNLY  426 (557)
T ss_pred             HHHHHHHHHHHHhhhHHHHhhhccCCCchHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhccCccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcccchhhhh
Q 010967          477 HQTLYADTRWFL  488 (496)
Q Consensus       477 ~eNl~asva~~~  488 (496)
                      ++||++||+-.+
T Consensus       427 ~~nL~aSVavLk  438 (557)
T KOG4467|consen  427 QINLPASVAVLK  438 (557)
T ss_pred             HhhchhHHHHHH
Confidence            999999999654



>PF10151 DUF2359: Uncharacterised conserved protein (DUF2359); InterPro: IPR019308 This is a 450 amino acid region of a family of proteins conserved from insects to humans Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query496
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 49.5 bits (117), Expect = 2e-06
 Identities = 52/352 (14%), Positives = 100/352 (28%), Gaps = 94/352 (26%)

Query: 196 MKIFRESTVAKMADIPLSQIPD----VVYKTSIDWINQRSPEVLGSFVL-WCL------- 243
           + +F ++ V    +     + D    ++ K  ID I      V G+  L W L       
Sbjct: 22  LSVFEDAFVD---NFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM 78

Query: 244 -----DSILAD----------VETHNVSSKASKKVVQQASSKSQVAIFVALAMVLRRKPD 288
                + +L             E    S      + Q+    +   +F     V R +P 
Sbjct: 79  VQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN-VSRLQP- 136

Query: 289 VLIGVLPALRENAKYQGQDKLPVIV---------WMIAQAS-----QGELAVGLYSWAHN 334
                   LR  A  + +    V++         W+          Q ++   ++ W + 
Sbjct: 137 -----YLKLR-QALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF-WLN- 188

Query: 335 LLPIVGGKNCNPQSRDIILQLVERILSSPKARTILVNGAVRKGERLVPPSALETLLRLTF 394
               +   NCN     ++  L + +       T   + +     +L   S    L RL  
Sbjct: 189 ----LK--NCN-SPETVLEMLQKLLYQIDPNWTSRSDHSSN--IKLRIHSIQAELRRLLK 239

Query: 395 PTSSAR-------VKATERFEA------IYPTLKEVALAGVPGSKAMKQVSL-------- 433
                        V+  + + A      I  T +   +     +     +SL        
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT 299

Query: 434 --QILSFAIKFAGESTPDLSNEAAGIF------IWCLTQSADCYKHWVSYSH 477
             ++ S  +K+      DL  E           I    +  D    W ++ H
Sbjct: 300 PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR--DGLATWDNWKH 349


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00