Citrus Sinensis ID: 011046

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-----
MASSSSLSPPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAGAPWPSNKTAPSNS
cccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccEEEcccccccccccccccEEEcccccccEEEEEEccccEEEEEccccccccEEEEcccccHHHHHHHcccccEEcHHHHHHHHHHHHHcccccEEEccccccccccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccEEEEcccccccccccccccccccccccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccHHHHHHHcccccEEEEccEEEccccccccccccccHHHHHHHHHcccccccccccccc
cccccccccccccHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccccccccEcccccEEEEcccccccEEEEEEcccccEEEEEccccHHHHHHccccccHHHHHHHccccccccHHHHHHHHHHHHcccccEEEEEEcccccccccccHHHHHcccccccccHHHHHHHHHHcEEEccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccEEEEcccccEEEEEcccccccccEcccccEEEEEEcEEEccEEccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccccccccccccEccccccccccccHHHcccccccccccccccEcccccEEEEcccEEEccccccHHccccHHHHHccHHHHHHHccccEEEEcccEEEEcccccEcccccccHHHHHHHHHcccccccccccccc
masssslsppkvpkelyFINREKVLNSLRQHLtetsrplhGFVLlqggeeqtrYCTDHLELFRQESYFAYLFgvrepgfygaidiatgksilfaprlppdyavwlgkikplsYFQEKYMVNMVYYTDEIVGVLqghykepgkpLLFLLHglntdsnnfskpaqfegMEKFETELNTLHPilsecrvfkSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHhtymyggcrhcsytcicatgensavlhyghaaapndrtfedgdMALLDMGaeyqfygsditcsfpvngkftsdQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAvfmphglghflgidthdpggypkgterskepglksLRTVRELQERMVITVEPGCYFIDAllvpamenestskffnhevigrfkdfggvrieSDVLVTAngsknmtsvpreisDIEAimagapwpsnktapsns
masssslsppkvpkELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILSECRVFKSDHELALIQFandisseahVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKgterskepglkslRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVtangsknmtsvpREISDIEaimagapwpsnktapsns
MAsssslsPPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAGAPWPSNKTAPSNS
***************LYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDS**********GMEKFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTH**********************VRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTAN**********************************
**************ELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIM***************
***********VPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY********EPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAGAPWP*********
*********PKVPKELYFINREKVLNSLRQHLTET*RPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTE*SKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAG*************
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MASSSSLSPPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAGAPWPSNKTAPSNS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query495 2.2.26 [Sep-21-2011]
P12955493 Xaa-Pro dipeptidase OS=Ho yes no 0.939 0.943 0.573 1e-158
Q5RFB3493 Xaa-Pro dipeptidase OS=Po yes no 0.939 0.943 0.573 1e-157
Q11136493 Xaa-Pro dipeptidase OS=Mu yes no 0.941 0.945 0.568 1e-157
Q5I0D7492 Xaa-Pro dipeptidase OS=Ra yes no 0.941 0.947 0.566 1e-156
Q55E60501 Xaa-Pro dipeptidase OS=Di yes no 0.929 0.918 0.462 1e-121
B2WMQ2463 Probable Xaa-Pro aminopep N/A no 0.858 0.917 0.371 7e-77
E3S6N7463 Probable Xaa-Pro aminopep N/A no 0.858 0.917 0.369 3e-75
A7UWH7468 Probable Xaa-Pro aminopep N/A no 0.886 0.938 0.349 2e-72
C9SDK8460 Probable Xaa-Pro aminopep N/A no 0.864 0.930 0.358 1e-71
E4ZHV7562 Probable Xaa-Pro aminopep N/A no 0.864 0.761 0.344 1e-71
>sp|P12955|PEPD_HUMAN Xaa-Pro dipeptidase OS=Homo sapiens GN=PEPD PE=1 SV=3 Back     alignment and function desciption
 Score =  559 bits (1441), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 272/474 (57%), Positives = 338/474 (71%), Gaps = 9/474 (1%)

Query: 11  KVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAY 70
           KVP  L+ +NR+++   LR++    +  +   V+LQGGEE  RYCTD   LFRQES+F +
Sbjct: 17  KVPLALFALNRQRLCERLRKNPAVQAGSI---VVLQGGEETQRYCTDTGVLFRQESFFHW 73

Query: 71  LFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIV 130
            FGV EPG YG ID+ TGKS LF PRLP  +A W+GKI    +F+EKY V+ V Y DEI 
Sbjct: 74  AFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIA 133

Query: 131 GVLQGHYKEPGKP-LLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILSECRVFKS 189
            VL        KP +L  L G+NTDS +  + A F+G+ KFE     LHP + ECRVFK+
Sbjct: 134 SVLTSQ-----KPSVLLTLRGVNTDSGSVCREASFDGISKFEVNNTILHPEIVECRVFKT 188

Query: 190 DHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATG 249
           D EL ++++ N ISSEAH EVMK  +VGMKEY++ES+F H+ Y  GG RH SYTCIC +G
Sbjct: 189 DMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSG 248

Query: 250 ENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNA 309
           ENSAVLHYGHA APNDRT ++GDM L DMG EY  + SDITCSFP NGKFT+DQ  +Y A
Sbjct: 249 ENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEA 308

Query: 310 VLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGL 369
           VL++  AV+ AMKPGV W DMH+LA++I LE L   G++ G+VD M+ A LGAVFMPHGL
Sbjct: 309 VLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGL 368

Query: 370 GHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMEN 429
           GHFLGID HD GGYP+G ER  EPGL+SLRT R LQ  MV+TVEPG YFID LL  A+ +
Sbjct: 369 GHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALAD 428

Query: 430 ESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAGA 483
            + + F N EV+ RF+ FGGVRIE DV+VT +G + +T VPR + +IEA MAG 
Sbjct: 429 PARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMAGC 482
Splits dipeptides with a prolyl or hydroxyprolyl residue in the C-terminal position. Plays an important role in collagen metabolism because the high level of iminoacids in collagen.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 4EC: .EC: 1EC: 3EC: .EC: 9
>sp|Q5RFB3|PEPD_PONAB Xaa-Pro dipeptidase OS=Pongo abelii GN=PEPD PE=2 SV=1 Back     alignment and function description
>sp|Q11136|PEPD_MOUSE Xaa-Pro dipeptidase OS=Mus musculus GN=Pepd PE=2 SV=3 Back     alignment and function description
>sp|Q5I0D7|PEPD_RAT Xaa-Pro dipeptidase OS=Rattus norvegicus GN=Pepd PE=2 SV=1 Back     alignment and function description
>sp|Q55E60|PEPD_DICDI Xaa-Pro dipeptidase OS=Dictyostelium discoideum GN=pepd PE=1 SV=1 Back     alignment and function description
>sp|B2WMQ2|AMPP3_PYRTR Probable Xaa-Pro aminopeptidase pepP OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=pepP PE=3 SV=1 Back     alignment and function description
>sp|E3S6N7|AMPP3_PYRTT Probable Xaa-Pro aminopeptidase pepP OS=Pyrenophora teres f. teres (strain 0-1) GN=pepP PE=3 SV=1 Back     alignment and function description
>sp|A7UWH7|AMPP2_NEUCR Probable Xaa-Pro aminopeptidase NCU11288 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU11288 PE=3 SV=1 Back     alignment and function description
>sp|C9SDK8|AMPP2_VERA1 Probable Xaa-Pro aminopeptidase VDBG_02538 OS=Verticillium albo-atrum (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) GN=VDBG_02538 PE=3 SV=1 Back     alignment and function description
>sp|E4ZHV7|AMPP3_LEPMJ Probable Xaa-Pro aminopeptidase PEPP OS=Leptosphaeria maculans (strain JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8) GN=PEPP PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query495
359484508509 PREDICTED: xaa-Pro dipeptidase-like [Vit 0.987 0.960 0.834 0.0
224088005488 predicted protein [Populus trichocarpa] 0.985 1.0 0.829 0.0
255546201494 xaa-pro dipeptidase, putative [Ricinus c 0.997 1.0 0.807 0.0
145348919486 Xaa-Pro dipeptidase [Arabidopsis thalian 0.979 0.997 0.783 0.0
22531162486 X-Pro dipeptidase-like protein [Arabidop 0.979 0.997 0.783 0.0
297803092486 X-Pro dipeptidase [Arabidopsis lyrata su 0.979 0.997 0.777 0.0
359806866477 uncharacterized protein LOC100793240 [Gl 0.959 0.995 0.791 0.0
449489859494 PREDICTED: xaa-Pro dipeptidase-like [Cuc 0.981 0.983 0.779 0.0
449435826494 PREDICTED: LOW QUALITY PROTEIN: xaa-Pro 0.981 0.983 0.773 0.0
194700576509 unknown [Zea mays] gi|413936724|gb|AFW71 0.981 0.954 0.733 0.0
>gi|359484508|ref|XP_002282779.2| PREDICTED: xaa-Pro dipeptidase-like [Vitis vinifera] gi|297738698|emb|CBI27943.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  864 bits (2232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/489 (83%), Positives = 449/489 (91%)

Query: 3   SSSSLSPPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELF 62
           +SSSL+PP+VP EL+ INR K++ SL QHLTE++ PLHGFVLLQGGEEQTR+ TDH ELF
Sbjct: 11  ASSSLTPPEVPMELHAINRGKLVKSLLQHLTESTHPLHGFVLLQGGEEQTRHDTDHAELF 70

Query: 63  RQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNM 122
           RQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLP +YAVWLG+IKPLSYF+E+YMV+ 
Sbjct: 71  RQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLPAEYAVWLGEIKPLSYFKERYMVSK 130

Query: 123 VYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILS 182
           V YTDEI GVL   YKE GKPLLFLLHGLNTDSNNFSKPA+FEG+EKF+T+LNTLHPIL+
Sbjct: 131 VCYTDEIAGVLHDEYKEQGKPLLFLLHGLNTDSNNFSKPAEFEGIEKFKTDLNTLHPILA 190

Query: 183 ECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSY 242
           ECRVFKSD ELALIQ+ANDISSEAHVEVM+KT VGMKEYQ+ESMFLHHTYMYGGCRHCSY
Sbjct: 191 ECRVFKSDLELALIQYANDISSEAHVEVMRKTTVGMKEYQLESMFLHHTYMYGGCRHCSY 250

Query: 243 TCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSD 302
           TCICATG NSAVLHYGHAAAPNDRTFEDGDMALLDMGAEY FYGSDITCSFPVNGKFTSD
Sbjct: 251 TCICATGGNSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYHFYGSDITCSFPVNGKFTSD 310

Query: 303 QSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGA 362
           Q LIYNAVL+AHN VI+AMKPGV W+DMHKLAEKIIL+SLKKG ++VG+VD+MM  RLGA
Sbjct: 311 QRLIYNAVLQAHNTVISAMKPGVNWIDMHKLAEKIILDSLKKGCIVVGDVDDMMVKRLGA 370

Query: 363 VFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDAL 422
           VFMPHGLGHFLGIDTHD GGY +G ER KEPGLKSLRTVR+LQE MVITVEPGCYFIDAL
Sbjct: 371 VFMPHGLGHFLGIDTHDTGGYLEGLERPKEPGLKSLRTVRDLQEGMVITVEPGCYFIDAL 430

Query: 423 LVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAG 482
           L PAMEN  TSKFFNHE+IGRFK FGGVRIESDV VT+NG KNMT+VPRE  +IEA+MAG
Sbjct: 431 LAPAMENSETSKFFNHEIIGRFKSFGGVRIESDVHVTSNGCKNMTNVPRETWEIEAVMAG 490

Query: 483 APWPSNKTA 491
           +PWP +K++
Sbjct: 491 SPWPLDKSS 499

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224088005|ref|XP_002308288.1| predicted protein [Populus trichocarpa] gi|222854264|gb|EEE91811.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255546201|ref|XP_002514160.1| xaa-pro dipeptidase, putative [Ricinus communis] gi|223546616|gb|EEF48114.1| xaa-pro dipeptidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|145348919|ref|NP_194678.2| Xaa-Pro dipeptidase [Arabidopsis thaliana] gi|110742445|dbj|BAE99141.1| putative prolidase [Arabidopsis thaliana] gi|332660237|gb|AEE85637.1| Xaa-Pro dipeptidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|22531162|gb|AAM97085.1| X-Pro dipeptidase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297803092|ref|XP_002869430.1| X-Pro dipeptidase [Arabidopsis lyrata subsp. lyrata] gi|297315266|gb|EFH45689.1| X-Pro dipeptidase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|359806866|ref|NP_001241060.1| uncharacterized protein LOC100793240 [Glycine max] gi|255637035|gb|ACU18850.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449489859|ref|XP_004158440.1| PREDICTED: xaa-Pro dipeptidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449435826|ref|XP_004135695.1| PREDICTED: LOW QUALITY PROTEIN: xaa-Pro dipeptidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|194700576|gb|ACF84372.1| unknown [Zea mays] gi|413936724|gb|AFW71275.1| xaa-Pro dipeptidase [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query495
TAIR|locus:2118284486 AT4G29490 [Arabidopsis thalian 0.971 0.989 0.781 8e-211
UNIPROTKB|P12955493 PEPD "Xaa-Pro dipeptidase" [Ho 0.939 0.943 0.574 3.6e-144
UNIPROTKB|F6Q234493 PEPD "Uncharacterized protein" 0.939 0.943 0.569 2e-143
MGI|MGI:97542493 Pepd "peptidase D" [Mus muscul 0.939 0.943 0.569 5.3e-143
RGD|1594571492 Pepd "peptidase D" [Rattus nor 0.939 0.945 0.567 2.9e-142
UNIPROTKB|Q5I0D7492 Pepd "Xaa-Pro dipeptidase" [Ra 0.939 0.945 0.567 2.9e-142
UNIPROTKB|F1NIQ9497 PEPD "Uncharacterized protein" 0.937 0.933 0.562 6.1e-142
ZFIN|ZDB-GENE-030131-9444496 pepd "peptidase D" [Danio reri 0.937 0.935 0.539 1.8e-135
FB|FBgn0000455491 Dip-C "Dipeptidase C" [Drosoph 0.939 0.947 0.5 7.8e-126
WB|WBGene00019673498 K12C11.1 [Caenorhabditis elega 0.947 0.941 0.505 4.3e-125
TAIR|locus:2118284 AT4G29490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2038 (722.5 bits), Expect = 8.0e-211, P = 8.0e-211
 Identities = 376/481 (78%), Positives = 422/481 (87%)

Query:     9 PPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYF 68
             PP +P EL+  NR+K+L S+R+ L+ ++R L GFVLLQGGEE+ RYCTDH ELFRQESYF
Sbjct:     6 PPPIPMELHAGNRKKLLESIRRQLSSSNRSLDGFVLLQGGEEKNRYCTDHTELFRQESYF 65

Query:    69 AYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDE 128
             AYLFGVREP FYGAIDI +GKSILF PRLP DYAVWLG+IKPLS+F+E YMV+MV+Y DE
Sbjct:    66 AYLFGVREPDFYGAIDIGSGKSILFIPRLPDDYAVWLGEIKPLSHFKETYMVDMVFYVDE 125

Query:   129 IVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILSECRVFK 188
             I+ V    +K  GKPLL+LLHGLNTDS+NFSKPA FEG++KFET+L TLHPIL+ECRV K
Sbjct:   126 IIQVFNEQFKGSGKPLLYLLHGLNTDSSNFSKPASFEGIDKFETDLTTLHPILAECRVIK 185

Query:   189 SDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICAT 248
             S  EL LIQFANDISSEAH+EVM+K   GMKEYQMESMFLHH+YMYGGCRHCSYTCICAT
Sbjct:   186 SSLELQLIQFANDISSEAHIEVMRKVTPGMKEYQMESMFLHHSYMYGGCRHCSYTCICAT 245

Query:   249 GENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYN 308
             G+NSAVLHYGHAAAPNDRTFEDGD+ALLDMGAEY FYGSDITCSFPVNGKFTSDQSLIYN
Sbjct:   246 GDNSAVLHYGHAAAPNDRTFEDGDLALLDMGAEYHFYGSDITCSFPVNGKFTSDQSLIYN 305

Query:   309 AVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHG 368
             AVL AHN+VI+AMKPGV WVDMHKLAEKIILESLKKG ++ G+VD+MM  RLGAVFMPHG
Sbjct:   306 AVLDAHNSVISAMKPGVNWVDMHKLAEKIILESLKKGSILTGDVDDMMVQRLGAVFMPHG 365

Query:   369 LGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAME 428
             LGHF+GIDTHD GGYPKG ER K+PGLKSLRT R+L E MVITVEPGCYFI ALL PAM 
Sbjct:   366 LGHFMGIDTHDTGGYPKGVERPKKPGLKSLRTARDLLEGMVITVEPGCYFIKALLFPAMA 425

Query:   429 NESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAGAPWPSN 488
             N +TSKFFN E I RF++FGGVRIESD++VTANG KNMT+VPRE  +IEA+MAG PWP  
Sbjct:   426 NATTSKFFNRETIERFRNFGGVRIESDLVVTANGCKNMTNVPRETWEIEAVMAGGPWPPT 485

Query:   489 K 489
             K
Sbjct:   486 K 486
GO:0004177 "aminopeptidase activity" evidence=IEA
GO:0009987 "cellular process" evidence=IEA
GO:0030145 "manganese ion binding" evidence=IEA
UNIPROTKB|P12955 PEPD "Xaa-Pro dipeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F6Q234 PEPD "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:97542 Pepd "peptidase D" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1594571 Pepd "peptidase D" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5I0D7 Pepd "Xaa-Pro dipeptidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NIQ9 PEPD "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-9444 pepd "peptidase D" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0000455 Dip-C "Dipeptidase C" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00019673 K12C11.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q55E60PEPD_DICDI3, ., 4, ., 1, 3, ., 90.46200.92920.9181yesno
B2AFW1AMPP3_PODAN3, ., 4, ., 1, 1, ., 90.34310.86460.9304yesno
Q11136PEPD_MOUSE3, ., 4, ., 1, 3, ., 90.56870.94140.9452yesno
B6H2M0AMPP3_PENCW3, ., 4, ., 1, 1, ., 90.34440.84840.9032yesno
Q96WX8AMPP3_EMENI3, ., 4, ., 1, 1, ., 90.34750.83230.8860yesno
Q5RFB3PEPD_PONAB3, ., 4, ., 1, 3, ., 90.57380.93930.9432yesno
P12955PEPD_HUMAN3, ., 4, ., 1, 3, ., 90.57380.93930.9432yesno
A2QKF6AMPP3_ASPNC3, ., 4, ., 1, 1, ., 90.34520.85450.9077yesno
Q5I0D7PEPD_RAT3, ., 4, ., 1, 3, ., 90.56650.94140.9471yesno
Q4X267AMPP3_ASPFU3, ., 4, ., 1, 1, ., 90.35110.85650.9059yesno
P44881AMPP_HAEIN3, ., 4, ., 1, 1, ., 90.33190.83230.9581yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.110.766
3rd Layer3.4.13.90.946
3rd Layer3.4.130.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00016599001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (509 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00029481001
SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (597 aa)
      • 0.493
GSVIVG00000444001
SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (925 aa)
      • 0.456
GSVIVG00016278001
SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (126 aa)
•       0.415

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query495
cd01087243 cd01087, Prolidase, Prolidase 1e-119
PRK10879438 PRK10879, PRK10879, proline aminopeptidase P II; P 9e-71
COG0006384 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid 3e-67
pfam00557208 pfam00557, Peptidase_M24, Metallopeptidase family 4e-59
PRK13607443 PRK13607, PRK13607, proline dipeptidase; Provision 5e-59
cd01092208 cd01092, APP-like, Similar to Prolidase and Aminop 5e-39
pfam05195134 pfam05195, AMP_N, Aminopeptidase P, N-terminal dom 2e-29
smart01011135 smart01011, AMP_N, Aminopeptidase P, N-terminal do 9e-29
cd01066207 cd01066, APP_MetAP, A family including aminopeptid 9e-29
PRK09795361 PRK09795, PRK09795, aminopeptidase; Provisional 6e-22
cd01085224 cd01085, APP, X-Prolyl Aminopeptidase 2 1e-10
COG0024255 COG0024, Map, Methionine aminopeptidase [Translati 6e-07
PRK14575406 PRK14575, PRK14575, putative peptidase; Provisiona 4e-05
PRK08671291 PRK08671, PRK08671, methionine aminopeptidase; Pro 4e-05
PRK15173323 PRK15173, PRK15173, peptidase; Provisional 4e-05
TIGR00500247 TIGR00500, met_pdase_I, methionine aminopeptidase, 4e-05
cd01086238 cd01086, MetAP1, Methionine Aminopeptidase 1 5e-05
PRK05716252 PRK05716, PRK05716, methionine aminopeptidase; Val 0.001
>gnl|CDD|238520 cd01087, Prolidase, Prolidase Back     alignment and domain information 
 Score =  349 bits (897), Expect = e-119
 Identities = 123/276 (44%), Positives = 164/276 (59%), Gaps = 33/276 (11%)

Query: 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENS 252
           + L++ A DIS+EAH   MK +R GM EY++E+ F +     G      Y+ I A G N+
Sbjct: 1   IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARLA--YSYIVAAGSNA 58

Query: 253 AVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLK 312
           A+LHY H    ND+  +DGD+ L+D GAEY  Y SDIT +FPVNGKFT +Q  +Y AVL 
Sbjct: 59  AILHYVH----NDQPLKDGDLVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLA 114

Query: 313 AHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHF 372
           A  A I A KPGV + D+H LA +++ E LK+ G++ G+VDE++ +   A F PHGLGH+
Sbjct: 115 AQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHY 174

Query: 373 LGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENEST 432
           LG+D HD GGY           L+ LR  R L+  MVIT+EPG YFI  LL         
Sbjct: 175 LGLDVHDVGGY-----------LRYLRRARPLEPGMVITIEPGIYFIPDLLDVP------ 217

Query: 433 SKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 468
                      +   GG+RIE DVLVT +G +N+T 
Sbjct: 218 ----------EYFRGGGIRIEDDVLVTEDGPENLTR 243

E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro. Length = 243
>gnl|CDD|182804 PRK10879, PRK10879, proline aminopeptidase P II; Provisional Back     alignment and domain information
>gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 Back     alignment and domain information
>gnl|CDD|237444 PRK13607, PRK13607, proline dipeptidase; Provisional Back     alignment and domain information
>gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>gnl|CDD|218491 pfam05195, AMP_N, Aminopeptidase P, N-terminal domain Back     alignment and domain information
>gnl|CDD|198079 smart01011, AMP_N, Aminopeptidase P, N-terminal domain Back     alignment and domain information
>gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>gnl|CDD|182080 PRK09795, PRK09795, aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|238518 cd01085, APP, X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|173039 PRK14575, PRK14575, putative peptidase; Provisional Back     alignment and domain information
>gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|185095 PRK15173, PRK15173, peptidase; Provisional Back     alignment and domain information
>gnl|CDD|129591 TIGR00500, met_pdase_I, methionine aminopeptidase, type I Back     alignment and domain information
>gnl|CDD|238519 cd01086, MetAP1, Methionine Aminopeptidase 1 Back     alignment and domain information
>gnl|CDD|235576 PRK05716, PRK05716, methionine aminopeptidase; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 495
KOG2737492 consensus Putative metallopeptidase [General funct 100.0
PRK10879438 proline aminopeptidase P II; Provisional 100.0
KOG2414488 consensus Putative Xaa-Pro aminopeptidase [Amino a 100.0
PRK13607443 proline dipeptidase; Provisional 100.0
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 100.0
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 100.0
PRK09795361 aminopeptidase; Provisional 100.0
PRK14575406 putative peptidase; Provisional 100.0
PRK14576405 putative endopeptidase; Provisional 100.0
PRK15173323 peptidase; Provisional 100.0
PRK12897248 methionine aminopeptidase; Reviewed 100.0
PRK07281286 methionine aminopeptidase; Reviewed 100.0
PRK12318291 methionine aminopeptidase; Provisional 100.0
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 100.0
PRK05716252 methionine aminopeptidase; Validated 100.0
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 100.0
PLN03158396 methionine aminopeptidase; Provisional 100.0
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 100.0
PRK12896255 methionine aminopeptidase; Reviewed 100.0
cd01091243 CDC68-like Related to aminopeptidase P and aminope 100.0
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 100.0
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 100.0
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 100.0
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 100.0
cd01066207 APP_MetAP A family including aminopeptidase P, ami 100.0
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 100.0
KOG1189 960 consensus Global transcriptional regulator, cell d 100.0
COG0024255 Map Methionine aminopeptidase [Translation, riboso 100.0
KOG2738369 consensus Putative methionine aminopeptidase [Post 100.0
PRK08671291 methionine aminopeptidase; Provisional 100.0
PTZ00053470 methionine aminopeptidase 2; Provisional 100.0
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 100.0
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 99.98
COG5406 1001 Nucleosome binding factor SPN, SPT16 subunit [Tran 99.98
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 99.98
KOG2413606 consensus Xaa-Pro aminopeptidase [Amino acid trans 99.95
PF05195134 AMP_N: Aminopeptidase P, N-terminal domain; InterP 99.82
KOG2776398 consensus Metallopeptidase [General function predi 99.27
KOG2775397 consensus Metallopeptidase [General function predi 99.08
PF01321132 Creatinase_N: Creatinase/Prolidase N-terminal doma 98.59
PF14826163 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-term 98.36
PLN03158396 methionine aminopeptidase; Provisional 96.66
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 96.13
KOG2738369 consensus Putative methionine aminopeptidase [Post 95.96
COG0024255 Map Methionine aminopeptidase [Translation, riboso 95.41
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 95.31
PRK12896255 methionine aminopeptidase; Reviewed 94.87
cd01066207 APP_MetAP A family including aminopeptidase P, ami 94.65
TIGR00495 389 crvDNA_42K 42K curved DNA binding protein. Protein 93.74
PRK05716252 methionine aminopeptidase; Validated 93.63
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 93.47
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 92.24
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 91.96
cd01091243 CDC68-like Related to aminopeptidase P and aminope 91.75
PRK12897248 methionine aminopeptidase; Reviewed 91.69
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 91.24
PTZ00053 470 methionine aminopeptidase 2; Provisional 91.2
PRK12318291 methionine aminopeptidase; Provisional 90.62
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 90.55
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 90.18
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 89.21
PRK09795361 aminopeptidase; Provisional 88.84
PRK07281286 methionine aminopeptidase; Reviewed 88.73
PRK08671291 methionine aminopeptidase; Provisional 88.45
PRK15173323 peptidase; Provisional 87.77
PRK14575406 putative peptidase; Provisional 87.5
PRK14576405 putative endopeptidase; Provisional 86.66
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 86.22
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 85.72
KOG2775 397 consensus Metallopeptidase [General function predi 84.86
>KOG2737 consensus Putative metallopeptidase [General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=1.2e-90  Score=663.06  Aligned_cols=475  Identities=66%  Similarity=1.123  Sum_probs=449.4

Q ss_pred             CCCHHHHHHHHHHHHHHhhhhhccC--CCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCCCCCCeEEEEEecCC
Q 011046           11 KVPKELYFINREKVLNSLRQHLTET--SRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATG   88 (495)
Q Consensus        11 ~~~~~~y~~R~~~l~~~~~~~~~~~--~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~~~~~~~lvl~~~~g   88 (495)
                      .+|.+.|..+|.|+-++++......  +++..+++++.|++++.||.+|..+.|||++.|+||+|.++|+++.+|...+|
T Consensus        11 ~vP~~lf~~nr~rl~~~lr~k~~~~nr~~~~~s~vllqgGeE~nrYctD~~~lFrQesYF~~lfGV~ep~~yg~idv~tg   90 (492)
T KOG2737|consen   11 LVPMELFAGNRKRLLEALRKKLLSSNRSLDGGSFVLLQGGEEKNRYCTDTTELFRQESYFAYLFGVREPGFYGAIDVGTG   90 (492)
T ss_pred             eecHHHhhcchHHHHHHHHhhcccccccccCceEEEEecchhhcccccchHHHHhhhhHHHHhhcCCCccceEEEEecCC
Confidence            3899999999999999988753211  24445799999999999999999999999999999999999999999988899


Q ss_pred             eeEEecCCCCcccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCchhhhhhhc
Q 011046           89 KSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGME  168 (495)
Q Consensus        89 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~  168 (495)
                      +.+||+|+++.+.+.|.|.+.+.+++++.+.+|.+.+.+++...+...    +++-++.+.+.++|+++.+....|.+..
T Consensus        91 KstLFvPrlp~~ya~W~G~i~~l~~fke~y~VDev~yvde~~~~~~~~----~~k~l~~l~g~nTDsg~v~~e~~f~g~~  166 (492)
T KOG2737|consen   91 KSTLFVPRLPDSYATWMGEILSLQHFKEKYAVDEVFYVDEIIQVLKGS----KPKLLYLLRGLNTDSGNVLKEASFAGIS  166 (492)
T ss_pred             ceEEEecCCChhhceeccccCCHHHHHHHhhhhheeehHhHHHHhhcc----CccceeeeeccccCcccccCcccccchh
Confidence            999999999999999999999999999999999999999999988665    7888999999999999888888888777


Q ss_pred             cccccccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeee
Q 011046          169 KFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICAT  248 (495)
Q Consensus       169 ~~~~~~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~s  248 (495)
                      .+..+..-+.+++.+.|.|||+.||+.||.|++|+++|+.++|++++||+.|+++++.+++.....||+...+|.+||+|
T Consensus       167 kf~~D~~~lyp~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh~sYtcIc~s  246 (492)
T KOG2737|consen  167 KFETDLTLLYPILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRHLSYTCICAS  246 (492)
T ss_pred             hcccCchhhhHHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccccccceeeec
Confidence            77667677889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Q 011046          249 GENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWV  328 (495)
Q Consensus       249 G~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~  328 (495)
                      |.|++++||.+.+.||++.+|.||++++|.|++|++|.|||||+|+++|++|++|+.+|+++++++.++++++|||+.|.
T Consensus       247 G~ns~vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~  326 (492)
T KOG2737|consen  247 GDNSAVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWV  326 (492)
T ss_pred             CCCcceeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence            99999999988789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCC
Q 011046          329 DMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERM  408 (495)
Q Consensus       329 dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GM  408 (495)
                      |+|..+.+++-++|++.|+++++++++++++.++.|+||++||.+||++||+++|+.+.+||..|++.+.+..+.|++||
T Consensus       327 Dmh~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~M  406 (492)
T KOG2737|consen  327 DMHKLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGM  406 (492)
T ss_pred             cHHHHHHHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCc
Confidence            99999999999999999999999999999999999999999999999999999999988999999999999999999999


Q ss_pred             EEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCCCCCCHHHHHHHHhcCCCCCC
Q 011046          409 VITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAGAPWPSN  488 (495)
Q Consensus       409 v~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~~p~~~~~Ie~~~~~~~~~~~  488 (495)
                      |+|+|||+||++.++++.+.||..+.|+|...++.|.++|||||||+|+||++|+|+||.+||+.++||+.|++..|+-+
T Consensus       407 viTvEPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt~vprtveeIEa~ma~g~~~p~  486 (492)
T KOG2737|consen  407 VITVEPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTCVPRTVEEIEACMAGGDKAPT  486 (492)
T ss_pred             EEEecCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEeccccccccCCCCCHHHHHHHHhcCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999843


Q ss_pred             C
Q 011046          489 K  489 (495)
Q Consensus       489 ~  489 (495)
                      |
T Consensus       487 ~  487 (492)
T KOG2737|consen  487 K  487 (492)
T ss_pred             c
Confidence            3

>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2776 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG2775 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3 Back     alignment and domain information
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2775 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query495
2iw2_A494 Crystal Structure Of Human Prolidase Length = 494 1e-160
1wl9_A440 Structure Of Aminopeptidase P From E. Coli Length = 3e-52
1m35_A440 Aminopeptidase P From Escherichia Coli Length = 440 8e-52
1jaw_A440 Aminopeptidase P From E. Coli Low Ph Form Length = 1e-51
2v3z_A440 Glu383ala Escherichia Coli Aminopeptidase P In Comp 2e-51
2bwy_A440 Glu383ala Escherichia Coli Aminopeptidase P Length 4e-51
2bws_A440 His243ala Escherichia Coli Aminopeptidase P Length 4e-51
2bwv_A440 His361ala Escherichia Coli Aminopeptidase P Length 4e-51
2bwt_A440 Asp260ala Escherichia Coli Aminopeptidase P Length 7e-51
2bwu_A440 Asp271ala Escherichia Coli Aminopeptidase P Length 7e-51
2bww_A440 His350ala Escherichia Coli Aminopeptidase P Length 1e-50
2bwx_A441 His354ala Escherichia Coli Aminopeptidase P Length 4e-50
3ig4_A427 Structure Of A Putative Aminopeptidase P From Bacil 7e-40
3rva_A451 Crystal Structure Of Organophosphorus Acid Anhydrol 7e-37
3l24_A517 Crystal Structure Of The Nerve Agent Degrading Orga 2e-33
1wy2_A351 Crystal Structure Of The Prolidase From Pyrococcus 9e-26
1pv9_A348 Prolidase From Pyrococcus Furiosus Length = 348 1e-24
3q6d_A356 Xaa-Pro Dipeptidase From Bacillus Anthracis. Length 2e-19
2zsg_A359 Crystal Structure Of X-Pro Aminopeptidase From Ther 7e-19
1wn1_A356 Crystal Structure Of Dipeptiase From Pyrococcus Hor 3e-16
4fkc_A377 Recombinant Prolidase From Thermococcus Sibiricus L 1e-12
4ege_A378 Crystal Structure Of Dipeptidase Pepe From Mycobact 4e-09
3ctz_A623 Structure Of Human Cytosolic X-Prolyl Aminopeptidas 5e-04
>pdb|2IW2|A Chain A, Crystal Structure Of Human Prolidase Length = 494 Back     alignment and structure 
Iteration: 1

 Score =  561 bits (1445), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 273/474 (57%), Positives = 339/474 (71%), Gaps = 9/474 (1%)
Query: 11  KVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAY 70
           KVP  L+ +NR+++   LR++    +  +   V+LQGGEE  RYCTD   LFRQES+F +
Sbjct: 18  KVPLALFALNRQRLCERLRKNPAVQAGSI---VVLQGGEETQRYCTDTGVLFRQESFFHW 74
Query: 71  LFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIV 130
            FGV EPG YG ID+ TGKS LF PRLP  +A W+GKI    +F+EKY V+ V Y DEI 
Sbjct: 75  AFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIA 134
Query: 131 GVLQGHYKEPGKP-LLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILSECRVFKS 189
            VL        KP +L  L G+NTDS +  + A F+G+ KFE     LHP + ECRVFK+
Sbjct: 135 SVLTSQ-----KPSVLLTLRGVNTDSGSVCREASFDGISKFEVNNTILHPEIVECRVFKT 189
Query: 190 DHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATG 249
           D EL ++++ N ISSEAH EVMK  +VGMKEY++ES+F H+ Y  GG RH SYTCIC +G
Sbjct: 190 DMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSG 249
Query: 250 ENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNA 309
           ENSAVLHYGHA APNDRT ++GDM L DMG EY  + SDITCSFP NGKFT+DQ  +Y A
Sbjct: 250 ENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEA 309
Query: 310 VLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGL 369
           VL++  AV+ AMKPGV W DMH+LA++I LE L   G++ G+VD M+ A LGAVFMPHGL
Sbjct: 310 VLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGL 369
Query: 370 GHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMEN 429
           GHFLGID HD GGYP+G ER  EPGL+SLRT R LQ  MV+TVEPG YFID LL  A+ +
Sbjct: 370 GHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALAD 429
Query: 430 ESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAGA 483
            + + FFN EV+ RF+ FGGVRIE DV+VT +G + +T VPR + +IEA MAG 
Sbjct: 430 PARASFFNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMAGC 483
>pdb|1WL9|A Chain A, Structure Of Aminopeptidase P From E. Coli Length = 440 Back     alignment and structure
>pdb|1M35|A Chain A, Aminopeptidase P From Escherichia Coli Length = 440 Back     alignment and structure
>pdb|1JAW|A Chain A, Aminopeptidase P From E. Coli Low Ph Form Length = 440 Back     alignment and structure
>pdb|2V3Z|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P In Complex With Substrate Length = 440 Back     alignment and structure
>pdb|2BWY|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWS|A Chain A, His243ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWV|A Chain A, His361ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWT|A Chain A, Asp260ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWU|A Chain A, Asp271ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWW|A Chain A, His350ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|3IG4|A Chain A, Structure Of A Putative Aminopeptidase P From Bacillus Anthracis Length = 427 Back     alignment and structure
>pdb|3RVA|A Chain A, Crystal Structure Of Organophosphorus Acid Anhydrolase From Alteromonas Macleodii Length = 451 Back     alignment and structure
>pdb|3L24|A Chain A, Crystal Structure Of The Nerve Agent Degrading Organophosphate AnhydrolasePROLIDASE IN COMPLEX WITH Inhibitors Length = 517 Back     alignment and structure
>pdb|1WY2|A Chain A, Crystal Structure Of The Prolidase From Pyrococcus Horikoshii Ot3 Length = 351 Back     alignment and structure
>pdb|1PV9|A Chain A, Prolidase From Pyrococcus Furiosus Length = 348 Back     alignment and structure
>pdb|3Q6D|A Chain A, Xaa-Pro Dipeptidase From Bacillus Anthracis. Length = 356 Back     alignment and structure
>pdb|2ZSG|A Chain A, Crystal Structure Of X-Pro Aminopeptidase From Thermotoga Maritima Msb8 Length = 359 Back     alignment and structure
>pdb|1WN1|A Chain A, Crystal Structure Of Dipeptiase From Pyrococcus Horikoshii Ot3 Length = 356 Back     alignment and structure
>pdb|4FKC|A Chain A, Recombinant Prolidase From Thermococcus Sibiricus Length = 377 Back     alignment and structure
>pdb|4EGE|A Chain A, Crystal Structure Of Dipeptidase Pepe From Mycobacterium Ulcerans Length = 378 Back     alignment and structure
>pdb|3CTZ|A Chain A, Structure Of Human Cytosolic X-Prolyl Aminopeptidase Length = 623 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query495
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 0.0
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 0.0
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 0.0
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 1e-173
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 1e-170
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 3e-56
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 2e-55
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 2e-54
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 2e-54
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 7e-53
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 7e-53
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 5e-52
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 6e-47
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 9e-45
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 9e-34
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 6e-12
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 2e-09
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 3e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-09
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 6e-07
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 1e-06
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Length = 494 Back     alignment and structure
 Score =  633 bits (1635), Expect = 0.0
 Identities = 271/478 (56%), Positives = 336/478 (70%), Gaps = 7/478 (1%)

Query: 9   PPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYF 68
             KVP  L+ +NR+++   LR++    +      V+LQGGEE  RYCTD   LFRQES+F
Sbjct: 16  TLKVPLALFALNRQRLCERLRKNPAVQA---GSIVVLQGGEETQRYCTDTGVLFRQESFF 72

Query: 69  AYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDE 128
            + FGV EPG YG ID+ TGKS LF PRLP  +A W+GKI    +F+EKY V+ V Y DE
Sbjct: 73  HWAFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDE 132

Query: 129 IVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILSECRVFK 188
           I  VL          +L  L G+NTDS +  + A F+G+ KFE     LHP + ECRVFK
Sbjct: 133 IASVL----TSQKPSVLLTLRGVNTDSGSVCREASFDGISKFEVNNTILHPEIVECRVFK 188

Query: 189 SDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICAT 248
           +D EL ++++ N ISSEAH EVMK  +VGMKEY++ES+F H+ Y  GG RH SYTCIC +
Sbjct: 189 TDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSSYTCICGS 248

Query: 249 GENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYN 308
           GENSAVLHYGHA APNDRT ++GDM L DMG EY  + SDITCSFP NGKFT+DQ  +Y 
Sbjct: 249 GENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYE 308

Query: 309 AVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHG 368
           AVL++  AV+ AMKPGV W DMH+LA++I LE L   G++ G+VD M+ A LGAVFMPHG
Sbjct: 309 AVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHG 368

Query: 369 LGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAME 428
           LGHFLGID HD GGYP+G ER  EPGL+SLRT R LQ  MV+TVEPG YFID LL  A+ 
Sbjct: 369 LGHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALA 428

Query: 429 NESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAGAPWP 486
           + + + FFN EV+ RF+ FGGVRIE DV+VT +G + +T VPR + +IEA MAG    
Sbjct: 429 DPARASFFNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMAGCDKA 486
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Length = 451 Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Length = 517 Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Length = 440 Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Length = 427 Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Length = 467 Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Length = 623 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query495
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 100.0
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 100.0
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 100.0
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 100.0
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 100.0
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 100.0
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 100.0
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 100.0
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 100.0
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 100.0
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 100.0
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 100.0
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 100.0
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 100.0
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 100.0
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 100.0
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 100.0
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 100.0
4fuk_A337 Methionine aminopeptidase; structural genomics con 100.0
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 100.0
3mx6_A262 Methionine aminopeptidase; seattle structural geno 100.0
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 100.0
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 100.0
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 100.0
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 100.0
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 100.0
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 100.0
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 100.0
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 100.0
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 100.0
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 100.0
3fm3_A358 Methionine aminopeptidase 2; metap2, structural ge 100.0
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 99.51
3il0_A131 Aminopeptidase P; XAA-Pro aminopeptidase; structur 98.79
3pn9_A138 Proline dipeptidase; structural genomics, PSI-2, p 98.67
3i7m_A140 XAA-Pro dipeptidase; structural genomics, APC64794 98.52
3o5v_A132 X-Pro dipeptidase; creatinase, N-terminal, PSI, MC 98.5
3ooo_A132 Proline dipeptidase; structural genomics, PSI-2, p 98.46
3qoc_A135 Putative metallopeptidase; MCSG, PSI-2, structural 98.46
3ovk_A132 Aminopeptidase P, XAA-Pro dipeptidase; structural 98.28
3ctz_A 623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 97.93
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 95.01
3fm3_A 358 Methionine aminopeptidase 2; metap2, structural ge 94.54
4fuk_A 337 Methionine aminopeptidase; structural genomics con 91.59
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 90.82
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 90.5
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 89.93
3mx6_A262 Methionine aminopeptidase; seattle structural geno 89.54
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 89.48
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 88.81
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 87.86
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 87.82
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 87.52
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 87.39
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 87.32
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 87.25
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 86.48
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 86.27
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 84.56
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 83.7
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 83.59
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 83.57
2q8k_A 401 Proliferation-associated protein 2G4; EBP1, PA2G4, 82.55
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 80.24
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
Probab=100.00  E-value=1.9e-87  Score=710.17  Aligned_cols=481  Identities=56%  Similarity=0.957  Sum_probs=421.2

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCCCCCCeEEEE
Q 011046            4 SSSLSPPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAI   83 (495)
Q Consensus         4 ~~~~~~~~~~~~~y~~R~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~~~~~~~lvl   83 (495)
                      ++++.++.|+.++|.+||++|+++|++...+.   .++++|+.|+.+..+++.|+.|+|||++||+|||||++|+++++|
T Consensus        11 ~~g~~~~~i~~~e~~~Rr~~l~~~~~~~~~~~---~~~~~il~~~~~~~~~~~d~~y~frq~s~f~YLtG~~~p~~~~vi   87 (494)
T 2iw2_A           11 WLGNETLKVPLALFALNRQRLCERLRKNPAVQ---AGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVI   87 (494)
T ss_dssp             CCSTTCCCEETHHHHHHHHHHHHHHHHCTTCC---TTCEEEEECCCCEESTTSCCEECCCCCHHHHHHHCCCSSSCEEEE
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHhhhccc---CceEEEEeCCcceeecCCCCCCCccCCcceeeecCCCCCCeEEEE
Confidence            56778889999999999999999998742111   247899999999888889999999999999999999999998888


Q ss_pred             EecCCeeEEecCCCCcccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCchhh
Q 011046           84 DIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQ  163 (495)
Q Consensus        84 ~~~~g~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~  163 (495)
                      .+.+++++||+++++...+.|.+.+.+.+.+.+.++++.+.+.+++.+.|.++    +.+++++..+.+.+.+.+.....
T Consensus        88 ~~~~~~~~L~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~i~~~~g~~~~~~~~~~~~~  163 (494)
T 2iw2_A           88 DVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQ----KPSVLLTLRGVNTDSGSVCREAS  163 (494)
T ss_dssp             ETTTCCEEEEECCCCGGGTTTTCCCCCHHHHHHHHTCSEEEEGGGHHHHHHHT----CCSCEECCCCBCTTTCCBCCCCC
T ss_pred             EccCCeEEEEECCCCHHHhhhcCCCCCHHHHHHHhCCcccccHHHHHHHHHhc----CCCeEEEecCccccccccccHhh
Confidence            77778999999999888889999999999999888888888889999999876    56678776565544333222222


Q ss_pred             hhhhccccccccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCcc
Q 011046          164 FEGMEKFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYT  243 (495)
Q Consensus       164 ~~~l~~~~~~~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~  243 (495)
                      +..+.....+.+++.+.+..+|+|||++||+.||+|++++++++.++++.++||+||.||++.+++.+++++|+..++|+
T Consensus       164 ~~~l~~~~~~~~~~~~~l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~~G~~~~~~~  243 (494)
T 2iw2_A          164 FDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSSYT  243 (494)
T ss_dssp             CTTGGGSCEECSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHCCCEESSC
T ss_pred             hhhhhhccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhCCCCcCCCC
Confidence            33333233567889999999999999999999999999999999999999999999999999999888776577788999


Q ss_pred             ceeeeCCCccccccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCC
Q 011046          244 CICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKP  323 (495)
Q Consensus       244 ~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikp  323 (495)
                      +||+||.|++++||.+.+.|++++|++||+|++|+|++|+|||+|+||||+|+|+|+++|+++|++++++|+++++++||
T Consensus       244 ~iv~sG~n~~~~Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sDitRT~~v~G~~s~~q~~~y~~v~~a~~~~i~~~kp  323 (494)
T 2iw2_A          244 CICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKP  323 (494)
T ss_dssp             CEEEEGGGGGCSSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred             ceEEEcCccccccccccCCCCCCccCCCCEEEEEeeEEECCEEEEeeEEEEECCcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999764467899999999999999999999999999999998999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCc
Q 011046          324 GVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRE  403 (495)
Q Consensus       324 G~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~  403 (495)
                      |+++.||+.++++++.+.|.++|+.++.++++++++++..||+|++||+|||++||.+.|+.+++++..|.+.+.+++.+
T Consensus       324 G~~~~di~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H~~GHgiGl~vHd~~~~~~~~~~~~~p~~~~~~~~~~  403 (494)
T 2iw2_A          324 GVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARH  403 (494)
T ss_dssp             TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCSSSSSCSCSSCTTCCCCCSTTGGGCSCCCB
T ss_pred             CCcHHHHHHHHHHHHHHHHHHcCCccccHHHHHhcccccccCCCCCcCCCCcccccCCCcccccccccccccccCCCCCE
Confidence            99999999999999999999999999999999999988889999999999999999988876666666666666667899


Q ss_pred             cCCCCEEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCCCCCCHHHHHHHHhcC
Q 011046          404 LQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAGA  483 (495)
Q Consensus       404 l~~GMv~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~~p~~~~~Ie~~~~~~  483 (495)
                      |++|||||||||+|+.+.+++.|..|++.+.|+|++++++|+|.|||||||+|+||++|+|+||.+|+++.+||++|++.
T Consensus       404 L~~GMV~tiEPGiy~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~gGvRiED~vlVte~G~e~LT~~p~~~~~ie~~m~~~  483 (494)
T 2iw2_A          404 LQPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMAGC  483 (494)
T ss_dssp             CCTTCEEEECCEEECCHHHHHHHHHCHHHHTTBCHHHHHHHTTCCEEECBEEEEECSSSEEECCCCCCSHHHHHHHHTTC
T ss_pred             eCCCCEEEECCccccccccchhhccccccccccccchhhhhCCCCEEEeeeEEEEcCCcCeECCCCCCcHHHHHHHHccC
Confidence            99999999999999988888889899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC
Q 011046          484 PWPSNKTA  491 (495)
Q Consensus       484 ~~~~~~~~  491 (495)
                      +||-++-+
T Consensus       484 ~~~~~~~~  491 (494)
T 2iw2_A          484 DKAFTPFS  491 (494)
T ss_dssp             --------
T ss_pred             CCCCCCCC
Confidence            99865433
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus} Back     alignment and structure
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae} Back     alignment and structure
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis} Back     alignment and structure
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas} Back     alignment and structure
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A* Back     alignment and structure
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae} Back     alignment and structure
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes} Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 495
d2v3za2264 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal 2e-40
d2gg2a1262 d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc 7e-33
d1pv9a2221 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal 6e-28
d1o0xa_249 d.127.1.1 (A:) Methionine aminopeptidase {Thermoto 2e-27
d1chma2246 d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter 2e-24
d1qxya_249 d.127.1.1 (A:) Methionine aminopeptidase {Staphylo 1e-19
d2v3za1176 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia c 3e-17
d1xgsa2218 d.127.1.1 (A:1-194,A:272-295) Methionine aminopept 3e-15
d1b6aa2295 d.127.1.1 (A:110-374,A:449-478) Methionine aminope 2e-12
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 264 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Aminopeptidase P, C-terminal domain
species: Escherichia coli [TaxId: 562]

 Score =  144 bits (363), Expect = 2e-40
 Identities = 106/296 (35%), Positives = 160/296 (54%), Gaps = 36/296 (12%)

Query: 189 SDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICAT 248
           S  E+A+++ A +I++ AH   M+K R GM EY +E   +HH +   G R+ SY  I  +
Sbjct: 1   SPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEG-EIHHEFNRHGARYPSYNTIVGS 59

Query: 249 GENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYN 308
           GEN  +LHY      N+    DGD+ L+D G EY+ Y  DIT +FPVNGKFT  Q  IY+
Sbjct: 60  GENGCILHYTE----NECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYD 115

Query: 309 AVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHG 368
            VL++    +   +PG   +++     +I++  L K G++ G+VDE++A      F  HG
Sbjct: 116 IVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHG 175

Query: 369 LGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAME 428
           L H+LG+D HD G Y +   R  EPG             MV+TV PG Y           
Sbjct: 176 LSHWLGLDVHDVGVYGQDRSRILEPG-------------MVLTVAPGLYIAP-------- 214

Query: 429 NESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREISDIEAIMAGA 483
                   + EV  +++   G+RIE D+++T  G++N+T SV ++  +IEA+M  A
Sbjct: 215 --------DAEVPEQYRGI-GIRIEDDIVITETGNENLTASVVKKPEEIEALMVAA 261
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 Back     information, alignment and structure
>d2v3za1 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia coli [TaxId: 562]} Length = 176 Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query495
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 100.0
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 100.0
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 100.0
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 100.0
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 100.0
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 100.0
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 100.0
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 100.0
d2v3za1176 Aminopeptidase P {Escherichia coli [TaxId: 562]} 99.86
d1kp0a1156 Creatinase {Actinobacillus sp. [TaxId: 41114]} 98.89
d1chma1155 Creatinase {Pseudomonas putida [TaxId: 303]} 98.84
d1pv9a1117 Aminopeptidase P {Archaeon Pyrococcus furiosus [Ta 98.35
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 93.05
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 92.86
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 92.14
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 91.86
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 90.03
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 88.19
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 86.17
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 82.33
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Aminopeptidase P, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=2.1e-50  Score=381.84  Aligned_cols=221  Identities=34%  Similarity=0.548  Sum_probs=202.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccccccCCCCCCCCCc
Q 011046          188 KSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRT  267 (495)
Q Consensus       188 Ks~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~  267 (495)
                      ||++||++||+|++++++++..+++.++||+||.||.+.+.+.+.+. |+...+|.+++++|.|++.+|+.    |++++
T Consensus         1 Ks~~EI~~mr~a~~i~~~~~~~~~~~i~~G~tE~ei~~~~~~~~~~~-G~~~~~~~~~v~~g~~~~~~h~~----~~~~~   75 (221)
T d1pv9a2           1 KTKEEIEIIEKACEIADKAVMAAIEEITEGKREREVAAKVEYLMKMN-GAEKPAFDTIIASGHRSALPHGV----ASDKR   75 (221)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCSEESSCCEEEEGGGGGSTTCB----CCSCB
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHhc-ccccccccccccccccccccccc----ccccc
Confidence            89999999999999999999999999999999999999999888876 66778889999999999999965    48999


Q ss_pred             cCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCC
Q 011046          268 FEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGV  347 (495)
Q Consensus       268 l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~  347 (495)
                      +++||+|++|+|+.++||++|++|||++ |+++++|+++|+.++++++++++++|||++++||++++++++.    +.|+
T Consensus        76 i~~gd~v~id~~~~~~gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~~v~~~~~~~~~----~~g~  150 (221)
T d1pv9a2          76 IERGDLVVIDLGALYNHYNSDITRTIVV-GSPNEKQREIYEIVLEAQKRAVEAAKPGMTAKELDSIAREIIK----EYGY  150 (221)
T ss_dssp             CCTTCEEEEEECEEETTEECCEEEEEES-SSCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH----HTTC
T ss_pred             ccccceEEEecccccCccccCcceeeec-CCccHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHhhhh----hccc
Confidence            9999999999999999999999999999 9999999999999999999999999999999999999988864    4555


Q ss_pred             ccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCccccccccccccc
Q 011046          348 MVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAM  427 (495)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~  427 (495)
                                   . .++.|++||++|+++||.|.+.             ..++.+|++||||+|||++|.         
T Consensus       151 -------------~-~~~~~~~Ghg~g~~~~e~~~~~-------------~~~~~~L~~gMv~~iep~~~~---------  194 (221)
T d1pv9a2         151 -------------G-DYFIHSLGHGVGLEIHEWPRIS-------------QYDETVLKEGMVITIEPGIYI---------  194 (221)
T ss_dssp             -------------G-GGCCSCSEEECSSSSSEEEEES-------------TTCCCBCCTTCEEEECCEEEE---------
T ss_pred             -------------C-CceeccccCCCCcccchhcccc-------------cCCCceeCCCcEEEECCEEEE---------
Confidence                         2 3688999999999999965322             245689999999999999997         


Q ss_pred             cccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCCCCC
Q 011046          428 ENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPR  471 (495)
Q Consensus       428 ~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~~p~  471 (495)
                                       ++.+|+|+||+|+||+||+|+||++||
T Consensus       195 -----------------~~~~g~r~Ed~v~Vte~G~e~Lt~~pr  221 (221)
T d1pv9a2         195 -----------------PKLGGVRIEDTVLITENGAKRLTKTER  221 (221)
T ss_dssp             -----------------TTTEEEECBEEEEECSSSEEESCCSCC
T ss_pred             -----------------CCCCEEEEeEEEEECCCcceECCCCCC
Confidence                             456799999999999999999999997
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2v3za1 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kp0a1 c.55.2.1 (A:1-156) Creatinase {Actinobacillus sp. [TaxId: 41114]} Back     information, alignment and structure
>d1chma1 c.55.2.1 (A:2-156) Creatinase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1pv9a1 c.55.2.1 (A:8-124) Aminopeptidase P {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure