Citrus Sinensis ID: 011091

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490----

MEEDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTVWLEFIDSNFLCLFLINICDICLNKTD

cccccccccccccccccccccccccccccccccccHHHHccccHHHHHHHHHHHHccccccHHHccccccccccHHHEEEEHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccEEHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccc

ccHHHccccccccccccccccccccccccccccccHHHHcccHHHHHHHHHHHHHccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHcccccccccccccHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccHcccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHEcccc

MEEDLLVSgeasgnnrnndnnrrrrgptalfrrrtdaitrgspyQKAAALVDLaedgiglpeeildrssfessAKFYFIFIKFDYIWSLNYFALIVLNFLEKplwcaktgvgtyscydreyyylgqlpyltgweSLVYEGITLVILIIHTffpityegspifwkSTYTRLKVLCLLILVADFLVYGlylspiafnflplriapyIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFttsnnpdvwipaykasrWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKafnlidnynvgflNKEQCIKLFEELNkyrtlpnisreEFELIFDElddthdfkINLDEFADLCNAIALRfqkedvpscfenlpsiyhspfSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTVWLEFIDSNFLCLFLINICDICLNKTD

meedllvsgeasgnnrnndnnrrrrgptalfrrrtdaitrgspyqKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKafnlidnynvgFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTVWLEFIDSNFLCLFLINICDICLNKTD

MEEDLLVSGEASGnnrnndnnrrrrGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAkfyfifikfdyiWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVlalgllfllfsswlaYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISReefelifdelddTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMisiilivnlvavivETTVWLEFIDSNFLCLFLINICDICLNKTD

*******************************************YQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQV****RMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTVWLEFIDSNFLCLFLINICDICLN***

***DLL*****************************************AALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFK***************RTLGKAFNLI***********QCIKLFEELNKYRT**********************KINLDEFADLCNAIA*************NLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTVWLEFIDSNFLCLFLINICDICLNKT*

**********************************TDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTVWLEFIDSNFLCLFLINICDICLNKT*

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		494	2.2.26 [Sep-21-2011]
Q94KI8		733	Two pore calcium channel	yes	no	0.884	0.596	0.710	0.0
Q75VR1		735	Two pore calcium channel	N/A	no	0.921	0.619	0.688	1e-177
Q75VR0		735	Two pore calcium channel	N/A	no	0.921	0.619	0.686	1e-171
Q5QM84		757	Two pore calcium channel	yes	no	0.874	0.570	0.612	1e-152
Q6YLX9		742	Two pore calcium channel	N/A	no	0.927	0.617	0.577	1e-149
Q6S5H8		742	Two pore calcium channel	N/A	no	0.927	0.617	0.579	1e-146
Q9ULQ1		816	Two pore calcium channel	yes	no	0.400	0.242	0.296	6e-18
Q9WTN5		817	Two pore calcium channel	yes	no	0.400	0.242	0.291	5e-17
Q9EQJ0		817	Two pore calcium channel	yes	no	0.398	0.241	0.289	5e-17
Q8NHX9		752	Two pore calcium channel	no	no	0.520	0.341	0.279	3e-12

>sp\|Q94KI8\|TPC1_ARATH Two pore calcium channel protein 1 OS=Arabidopsis thaliana GN=TPC1 PE=1 SV=1	Back alignment and function desciption

 Score =  639 bits (1647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/439 (71%), Positives = 368/439 (83%), Gaps = 2/439 (0%)

Query: 33  RRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYF 92
           RR++AIT G+P+QKAAALVDLAEDGIGLP EILD+SSF  SA++YFIF + D IWSLNYF
Sbjct: 20  RRSEAITHGTPFQKAAALVDLAEDGIGLPVEILDQSSFGESARYYFIFTRLDLIWSLNYF 79

Query: 93  ALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFF 152
           AL+ LNF E+PLWC K      SC DR+YYYLG+LPYLT  ES++YE ITL IL++HTFF
Sbjct: 80  ALLFLNFFEQPLWCEKNP--KPSCKDRDYYYLGELPYLTNAESIIYEVITLAILLVHTFF 137

Query: 153 PITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFIL 212
           PI+YEGS IFW S    +KV C++IL  D LV  LYLSP+AF+FLP RIAPY+RV+ FIL
Sbjct: 138 PISYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSPLAFDFLPFRIAPYVRVIIFIL 197

Query: 213 NIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQ 272
           +IR+LRDTL +L+GMLGTYLN+LAL +LFLLF+SW+A+V+FEDT QG  VFTS+G TLYQ
Sbjct: 198 SIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFEDTQQGLTVFTSYGATLYQ 257

Query: 273 MFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVS 332
           MF+LFTTSNNPDVWIPAYK+SRW  +FFVLYVLIGVYFVTNLILAVVYDSFK QLAKQVS
Sbjct: 258 MFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYDSFKEQLAKQVS 317

Query: 333 EMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDD 392
            MD+M+RR L KAF LID+   G ++K QCIKLFE+L  YRTLP IS+EEF LIFDELDD
Sbjct: 318 GMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEEFGLIFDELDD 377

Query: 393 THDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMIS 452
           T DFKIN DEFADLC AIALRFQKE+VPS FE+ P IYHS  S++L+AF+RS  FGY IS
Sbjct: 378 TRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQLRAFVRSPNFGYAIS 437

Query: 453 IILIVNLVAVIVETTVWLE 471
            ILI+N +AV+VETT+ +E
Sbjct: 438 FILIINFIAVVVETTLDIE 456

Functions as a voltage-gated inward-rectifying Ca(2+) channel (VDCC) across the vacuole membrane. Is one of the essential components of the slow vacuolar (SV) channel. Acts as the major ROS-responsive Ca(2+) channel and is the possible target of Al-dependent inhibition. Involved in the regulation of germination and stomatal movement.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q75VR1\|TPC1A_TOBAC Two pore calcium channel protein 1A OS=Nicotiana tabacum GN=TPC1A PE=2 SV=1	Back alignment and function description

>sp\|Q75VR0\|TPC1B_TOBAC Two pore calcium channel protein 1B OS=Nicotiana tabacum GN=TPC1B PE=2 SV=1	Back alignment and function description

>sp\|Q5QM84\|TPC1_ORYSJ Two pore calcium channel protein 1 OS=Oryza sativa subsp. japonica GN=TPC1 PE=1 SV=2	Back alignment and function description

>sp\|Q6YLX9\|TPC1_WHEAT Two pore calcium channel protein 1 OS=Triticum aestivum GN=TPC1 PE=2 SV=1	Back alignment and function description

>sp\|Q6S5H8\|TPC1_HORVU Two pore calcium channel protein 1 OS=Hordeum vulgare GN=TPC1 PE=2 SV=1	Back alignment and function description

>sp\|Q9ULQ1\|TPC1_HUMAN Two pore calcium channel protein 1 OS=Homo sapiens GN=TPCN1 PE=1 SV=3	Back alignment and function description

>sp\|Q9WTN5\|TPC1_RAT Two pore calcium channel protein 1 OS=Rattus norvegicus GN=Tpcn1 PE=1 SV=2	Back alignment and function description

>sp\|Q9EQJ0\|TPC1_MOUSE Two pore calcium channel protein 1 OS=Mus musculus GN=Tpcn1 PE=2 SV=1	Back alignment and function description

>sp\|Q8NHX9\|TPC2_HUMAN Two pore calcium channel protein 2 OS=Homo sapiens GN=TPCN2 PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		494
225446362		680	PREDICTED: two pore calcium channel prot	0.923	0.670	0.740	0.0
302143292		732	unnamed protein product [Vitis vinifera]	0.923	0.622	0.740	0.0
197215947		680	two pore channel 1 [Vitis vinifera]	0.923	0.670	0.740	0.0
255553747		743	Voltage-dependent L-type calcium channel	0.927	0.616	0.747	0.0
449438094		738	PREDICTED: two pore calcium channel prot	0.880	0.589	0.736	0.0
449479156		550	PREDICTED: two pore calcium channel prot	0.880	0.790	0.737	0.0
297813953		732	two-pore channel 1 [Arabidopsis lyrata s	0.908	0.613	0.698	0.0
18412295		733	two pore calcium channel protein 1 [Arab	0.884	0.596	0.710	1e-180
224121708		726	predicted protein [Populus trichocarpa]	0.902	0.614	0.717	1e-180
14041819		733	two-pore calcium channel [Arabidopsis th	0.884	0.596	0.706	1e-180

>gi\|225446362\|ref\|XP_002273215.1\| PREDICTED: two pore calcium channel protein 1A [Vitis vinifera]	Back alignment and taxonomy information

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/466 (74%), Positives = 401/466 (86%), Gaps = 10/466 (2%)

Query: 6   LVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPEEIL 65
           L+ GE+SG         RRRG T +F RR+DAI  GSPYQKAAALVDLAEDGIGLPE++L
Sbjct: 5   LLDGESSGG--------RRRGQTPVFHRRSDAIAYGSPYQKAAALVDLAEDGIGLPEQML 56

Query: 66  DRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLG 125
           D+ SFES+AKFYFIFI+F+++WSLN FALIVLNFLEKPLWCAK    TYSC DREYY+LG
Sbjct: 57  DQESFESAAKFYFIFIRFNFLWSLNLFALIVLNFLEKPLWCAKQT--TYSCNDREYYFLG 114

Query: 126 QLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVY 185
           QLPYLT  ESL+YEGITLVI+++HTFFPI+YEGS I+WK+   RLKV+ L ILVAD LVY
Sbjct: 115 QLPYLTSVESLIYEGITLVIILLHTFFPISYEGSQIYWKNPLNRLKVILLSILVADLLVY 174

Query: 186 GLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFS 245
            LYLSP+ F +LP R+APYIRV+  ILNIR++R T+ +LAGMLGTYLN++ALGLLFLLF+
Sbjct: 175 VLYLSPLPFYYLPFRLAPYIRVILCILNIREVRATMVILAGMLGTYLNIMALGLLFLLFA 234

Query: 246 SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVL 305
           SW+AYV+FEDT QG  VFTS+ TTLYQMF+LFTTSNNPDVWIPAYK SRWYCLFFVLY+L
Sbjct: 235 SWVAYVMFEDTQQGKTVFTSYLTTLYQMFILFTTSNNPDVWIPAYKVSRWYCLFFVLYML 294

Query: 306 IGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKL 365
           +GVYF+TNLILAV+YDSFK+QLAKQV+EMDRMRRR L KAFNLID  N+GFL KEQCI L
Sbjct: 295 LGVYFMTNLILAVIYDSFKNQLAKQVAEMDRMRRRILEKAFNLIDKSNLGFLKKEQCIHL 354

Query: 366 FEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFEN 425
           FEELNKYR+LP ISRE+FELIFDELDD++DFKINLDEF DLCNAI L FQKED  S FE 
Sbjct: 355 FEELNKYRSLPKISREDFELIFDELDDSNDFKINLDEFFDLCNAITLSFQKEDSQSWFER 414

Query: 426 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTVWLE 471
            PS YHSP  EKLKAF+RS+ FG MI++IL++NLVAVI+ETT+ +E
Sbjct: 415 YPSFYHSPACEKLKAFVRSSIFGNMIAVILVLNLVAVIIETTLDIE 460

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|302143292\|emb\|CBI21853.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|197215947\|gb\|ACH53197.1\| two pore channel 1 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255553747\|ref\|XP_002517914.1\| Voltage-dependent L-type calcium channel, putative [Ricinus communis] gi\|223542896\|gb\|EEF44432.1\| Voltage-dependent L-type calcium channel, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|449438094\|ref\|XP_004136825.1\| PREDICTED: two pore calcium channel protein 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449479156\|ref\|XP_004155521.1\| PREDICTED: two pore calcium channel protein 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297813953\|ref\|XP_002874860.1\| two-pore channel 1 [Arabidopsis lyrata subsp. lyrata] gi\|297320697\|gb\|EFH51119.1\| two-pore channel 1 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi|18412295|ref|NP_567258.1| two pore calcium channel protein 1 [Arabidopsis thaliana] gi|75166464|sp|Q94KI8.1|TPC1_ARATH RecName: Full=Two pore calcium channel protein 1; AltName: Full=Calcium channel protein 1; Short=AtCCH1; AltName: Full=Fatty acid oxygenation up-regulated protein 2; AltName: Full=Voltage-dependent calcium channel protein TPC1; Short=AtTPC1 gi|13786069|gb|AAK39554.1|AF360372_1 putative calcium channel [Arabidopsis thaliana] gi|222422931|dbj|BAH19452.1| AT4G03560 [Arabidopsis thaliana] gi|332656937|gb|AEE82337.1| two pore calcium channel protein 1 [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|224121708\|ref\|XP_002330633.1\| predicted protein [Populus trichocarpa] gi\|222872237\|gb\|EEF09368.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|14041819\|dbj\|BAB55460.1\| two-pore calcium channel [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		494
TAIR\|locus:2128716		733	TPC1 "two-pore channel 1" [Ara	0.884	0.596	0.626	1.1e-142
UNIPROTKB\|I3LAZ6		309	LOC100620627 "Uncharacterized	0.433	0.692	0.280	8.3e-21
UNIPROTKB\|J9JHA5		773	TPC3 "Uncharacterized protein"	0.661	0.423	0.253	1e-20
UNIPROTKB\|C4IXV8		768	TPC3 "Uncharacterized protein"	0.657	0.423	0.246	2.3e-20
UNIPROTKB\|E1BXD3		587	E1BXD3 "Uncharacterized protei	0.394	0.332	0.289	8.8e-15
UNIPROTKB\|F1NNJ8		569	F1NNJ8 "Uncharacterized protei	0.382	0.332	0.278	1.8e-14
UNIPROTKB\|E2QYG4		751	TPCN2 "Uncharacterized protein	0.688	0.452	0.25	8.3e-14
DICTYBASE\|DDB_G0289105		2060	DDB_G0289105 "two-pore calcium	0.421	0.100	0.266	1.5e-13
UNIPROTKB\|F1MSJ0		793	TPCN1 "Uncharacterized protein	0.601	0.374	0.212	9e-13
UNIPROTKB\|B7Z3R2		748	TPCN1 "Two pore calcium channe	0.601	0.397	0.212	1.8e-12

TAIR\|locus:2128716 TPC1 "two-pore channel 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1395 (496.1 bits), Expect = 1.1e-142, P = 1.1e-142
 Identities = 275/439 (62%), Positives = 322/439 (73%)

Query:    33 RRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAXXXXXXXXXXXXWSLNYF 92
             RR++AIT G+P+QKAAALVDLAEDGIGLP EILD+SSF  SA            WSLNYF
Sbjct:    20 RRSEAITHGTPFQKAAALVDLAEDGIGLPVEILDQSSFGESARYYFIFTRLDLIWSLNYF 79

Query:    93 ALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFF 152
             AL+ LNF E+PLWC K      SC DR+YYYLG+LPYLT  ES++YE ITL IL++HTFF
Sbjct:    80 ALLFLNFFEQPLWCEKNPKP--SCKDRDYYYLGELPYLTNAESIIYEVITLAILLVHTFF 137

Query:   153 PITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFIL 212
             PI+YEGS IFW S    +KV C++IL  D LV  LYLSP+AF+FLP RIAPY+RV+ FIL
Sbjct:   138 PISYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSPLAFDFLPFRIAPYVRVIIFIL 197

Query:   213 NIRQLRDTLFVLAGMLGTYLNVXXXXXXXXXXXXXXXYVIFEDTVQGNMVFTSFGTTLYQ 272
             +IR+LRDTL +L+GMLGTYLN+               +V+FEDT QG  VFTS+G TLYQ
Sbjct:   198 SIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFEDTQQGLTVFTSYGATLYQ 257

Query:   273 MFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVS 332
             MF+LFTTSNNPDVWIPAYK+SRW  +FFVLYVLIGVYFVTNLILAVVYDSFK QLAKQVS
Sbjct:   258 MFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYDSFKEQLAKQVS 317

Query:   333 EMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISRXXXXXXXXXXXX 392
              MD+M+RR L KAF LID+   G ++K QCIKLFE+L  YRTLP IS+            
Sbjct:   318 GMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEEFGLIFDELDD 377

Query:   393 THDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMXX 452
             T DFKIN DEFADLC AIALRFQKE+VPS FE+ P IYHS  S++L+AF+RS  FGY   
Sbjct:   378 TRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQLRAFVRSPNFGYAIS 437

Query:   453 XXXXXXXXXXXXETTVWLE 471
                         ETT+ +E
Sbjct:   438 FILIINFIAVVVETTLDIE 456

GO:0005216 "ion channel activity" evidence=IEA

GO:0005262 "calcium channel activity" evidence=IGI;ISS;IMP

GO:0005509 "calcium ion binding" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005245 "voltage-gated calcium channel activity" evidence=IGI;ISS

GO:0005886 "plasma membrane" evidence=TAS

GO:0006816 "calcium ion transport" evidence=IC;RCA;IMP

GO:0005773 "vacuole" evidence=IDA

GO:0000325 "plant-type vacuole" evidence=IDA

GO:0009845 "seed germination" evidence=IMP

GO:0010119 "regulation of stomatal movement" evidence=IMP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0080141 "regulation of jasmonic acid biosynthetic process" evidence=IMP

GO:0019722 "calcium-mediated signaling" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0007033 "vacuole organization" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

UNIPROTKB\|I3LAZ6 LOC100620627 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|J9JHA5 TPC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|C4IXV8 TPC3 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BXD3 E1BXD3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NNJ8 F1NNJ8 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|E2QYG4 TPCN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0289105 DDB_G0289105 "two-pore calcium channel protein 2" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|F1MSJ0 TPCN1 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|B7Z3R2 TPCN1 "Two pore calcium channel protein 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q94KI8	TPC1_ARATH	No assigned EC number	0.7107	0.8846	0.5961	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		494
pfam00520		194	pfam00520, Ion_trans, Ion transport protein	3e-11
pfam13499		60	pfam13499, EF_hand_5, EF-hand domain pair	7e-05
cd00051		63	cd00051, EFh, EF-hand, calcium binding motif; A di	9e-04

>gnl\|CDD\|215968 pfam00520, Ion_trans, Ion transport protein	Back alignment and domain information

 Score = 61.9 bits (151), Expect = 3e-11
 Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 14/170 (8%)

Query: 162 FWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTL 221
           +++S +  L  L +L  +   +++ L         L  R+   +R++  +     LR  L
Sbjct: 27  YFRSPWNILDFLVVLPSLVSLILFLLGEDSGLLRVL--RLLRLLRLLRLLRRFPGLRTLL 84

Query: 222 FVLAGMLGTYLNVLALGLLFLLFSSWLAYVIF-----------EDTVQGNMVFTSFGTTL 270
             L   L + LN+L L LL L   + +   +F           E+ + GN  F S+G  L
Sbjct: 85  QSLGRSLKSLLNLLLLLLLLLFIFAIIGVQLFGGELDKCCDKNENPINGNSNFDSYGEAL 144

Query: 271 YQMFVLFTTSNNPDVWIPAYKASRWYC-LFFVLYVLIGVYFVTNLILAVV 319
             +F   TT    DV             +FFV+++++G   + NL++ V+
Sbjct: 145 LWLFRTLTTEGWGDVMYDTLVPGTVLGKIFFVIFIILGGVLLLNLLIGVI 194

This family contains Sodium, Potassium, Calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not the Pfam family due to it lacking the first four helices. Length = 194

>gnl\|CDD\|222177 pfam13499, EF_hand_5, EF-hand domain pair	Back alignment and domain information

>gnl\|CDD\|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		494
KOG2302		1956	consensus T-type voltage-gated Ca2+ channel, pore-	100.0
KOG2301		1592	consensus Voltage-gated Ca2+ channels, alpha1 subu	100.0
KOG2301		1592	consensus Voltage-gated Ca2+ channels, alpha1 subu	100.0
KOG2302		1956	consensus T-type voltage-gated Ca2+ channel, pore-	99.96
PF00520		200	Ion_trans: Ion transport protein calcium channel s	99.89
KOG3713		477	consensus Voltage-gated K+ channel KCNB/KCNC [Inor	99.87
PLN03223		1634	Polycystin cation channel protein; Provisional	99.86
KOG1545		507	consensus Voltage-gated shaker-like K+ channel KCN	99.69
PF08016		425	PKD_channel: Polycystin cation channel; InterPro:	99.63
KOG3599		798	consensus Ca2+-modulated nonselective cation chann	99.63
KOG4390		632	consensus Voltage-gated A-type K+ channel KCND [In	99.34
TIGR00870		743	trp transient-receptor-potential calcium channel p	99.22
KOG1419		654	consensus Voltage-gated K+ channel KCNQ [Inorganic	98.96
KOG3609		822	consensus Receptor-activated Ca2+-permeable cation	98.51
PLN03192		823	Voltage-dependent potassium channel; Provisional	98.21
KOG3614		1381	consensus Ca2+/Mg2+-permeable cation channels (LTR	97.81
PF13499		66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	97.76
KOG0510		929	consensus Ankyrin repeat protein [General function	97.63
cd05022		89	S-100A13 S-100A13: S-100A13 domain found in protei	97.6
cd05027		88	S-100B S-100B: S-100B domain found in proteins sim	97.52
smart00027		96	EH Eps15 homology domain. Pair of EF hand motifs t	97.35
cd00052		67	EH Eps15 homology domain; found in proteins implic	97.35
COG5126		160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	97.24
KOG3533		2706	consensus Inositol 1,4,5-trisphosphate receptor [S	97.11
cd05026		93	S-100Z S-100Z: S-100Z domain found in proteins sim	97.1
KOG0027		151	consensus Calmodulin and related proteins (EF-Hand	97.08
cd00213		88	S-100 S-100: S-100 domain, which represents the la	97.04
cd05031		94	S-100A10_like S-100A10_like: S-100A10 domain found	97.03
cd05025		92	S-100A1 S-100A1: S-100A1 domain found in proteins	97.03
cd00051		63	EFh EF-hand, calcium binding motif; A diverse supe	96.92
KOG0028		172	consensus Ca2+-binding protein (centrin/caltractin	96.79
KOG3676		782	consensus Ca2+-permeable cation channel OSM-9 and	96.71
cd05023		89	S-100A11 S-100A11: S-100A11 domain found in protei	96.69
PF13833		54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	96.63
PTZ00184		149	calmodulin; Provisional	96.6
PRK10537		393	voltage-gated potassium channel; Provisional	96.58
PTZ00183		158	centrin; Provisional	96.56
cd05029		88	S-100A6 S-100A6: S-100A6 domain found in proteins	96.42
KOG0027		151	consensus Calmodulin and related proteins (EF-Hand	96.41
KOG3733		566	consensus Mucolipidin and related proteins (TRML s	96.37
PF00036		29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	96.11
PTZ00184		149	calmodulin; Provisional	96.09
PTZ00183		158	centrin; Provisional	95.85
KOG0498		727	consensus K+-channel ERG and related proteins, con	95.8
cd00252		116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	95.72
KOG0044		193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	95.68
KOG0034		187	consensus Ca2+/calmodulin-dependent protein phosph	95.6
COG5126		160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	95.55
PF12763		104	EF-hand_4: Cytoskeletal-regulatory complex EF hand	95.31
PF14788		51	EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QA	94.9
cd05024		91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	94.83
cd05030		88	calgranulins Calgranulins: S-100 domain found in p	94.56
KOG0031		171	consensus Myosin regulatory light chain, EF-Hand p	94.4
KOG1420		1103	consensus Ca2+-activated K+ channel Slowpoke, alph	94.37
PF13202		25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	94.17
PF14658		66	EF-hand_9: EF-hand domain	94.13
PLN02964		644	phosphatidylserine decarboxylase	93.86
PF13405		31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	93.28
KOG0041		244	consensus Predicted Ca2+-binding protein, EF-Hand	92.71
KOG0037		221	consensus Ca2+-binding protein, EF-Hand protein su	92.6
PF07885		79	Ion_trans_2: Ion channel; InterPro: IPR013099 This	92.37
KOG0377		631	consensus Protein serine/threonine phosphatase RDG	92.33
KOG0377		631	consensus Protein serine/threonine phosphatase RDG	92.17
PRK12309		391	transaldolase/EF-hand domain-containing protein; P	92.15
KOG0036		463	consensus Predicted mitochondrial carrier protein	92.12
KOG0036		463	consensus Predicted mitochondrial carrier protein	91.58
KOG0031		171	consensus Myosin regulatory light chain, EF-Hand p	91.34
PF00036		29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	90.22
KOG0028		172	consensus Ca2+-binding protein (centrin/caltractin	90.15
KOG0038		189	consensus Ca2+-binding kinase interacting protein	89.95
PLN02964		644	phosphatidylserine decarboxylase	89.05
KOG0044		193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	88.79
PF13405		31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	85.72
KOG0046		627	consensus Ca2+-binding actin-bundling protein (fim	85.45
KOG0034		187	consensus Ca2+/calmodulin-dependent protein phosph	85.31
KOG1029		1118	consensus Endocytic adaptor protein intersectin [S	84.88
PF13202		25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	83.03

>KOG2302 consensus T-type voltage-gated Ca2+ channel, pore-forming alpha1I subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

Probab=100.00  E-value=3.2e-37  Score=328.15  Aligned_cols=285  Identities=20%  Similarity=0.285  Sum_probs=236.9

Q ss_pred             HHHHHHHHHHHHHHHHhhccc----chhhccccccchhHHHHHHHHHHHHHHhhcC--CcCCcchhhhHhHHHHHHHHhc
Q 011091          139 EGITLVILIIHTFFPITYEGS----PIFWKSTYTRLKVLCLLILVADFLVYGLYLS--PIAFNFLPLRIAPYIRVVFFIL  212 (494)
Q Consensus       139 E~i~l~iF~~E~~lk~~~~g~----~~y~~~~wN~~d~ivvv~~~id~i~~~~~~~--~~~~~~~~lR~~R~lR~lrli~  212 (494)
                      +.+|++||.+|+.+|+++.|+    ..|+++.||.+|.+++.++++|+++......  ......+++|.+|.+||+|.|+
T Consensus      1162 nyIFtaIfV~Em~lKVVALGl~fge~aYl~ssWN~LDgflv~vsviDilvs~asa~g~kILgVlrvLRlLRtlRpLRviS 1241 (1956)
T KOG2302|consen 1162 NYIFTAIFVVEMTLKVVALGLYFGEQAYLRSSWNVLDGFLVAVSVIDILVSQASAGGAKILGVLRVLRLLRTLRPLRVIS 1241 (1956)
T ss_pred             chHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhHHHHHh
Confidence            689999999999999999885    6799999999999999999999988765321  1112457788889999999999


Q ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--------------------c-----cccccCcHH
Q 011091          213 NIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTV--------------------Q-----GNMVFTSFG  267 (494)
Q Consensus       213 ~~~~lr~l~~~l~~sl~~i~~v~~ll~l~~~ifAilg~~lF~~~~--------------------~-----g~~~F~~~~  267 (494)
                      +-++++.++.++..|+|+|++++++++-++++|+++|+|+|.|+.                    +     ...||+|.+
T Consensus      1242 ra~glklVveTL~sSLkpIgnIvliccaffiiFgilgvqLFkgkfy~c~g~dtrnitnKSdc~aa~yRwvrhkyNfdnlg 1321 (1956)
T KOG2302|consen 1242 RAPGLKLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDTRNITNKSDCMAAPYRWVRHKYNFDNLG 1321 (1956)
T ss_pred             hcccHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHhcccceeccccccccccchhhhcccchhhhhhhcccchHH
Confidence            999999999999999999999999999999999999999999742                    0     146899999


Q ss_pred             HHHHHHHhHhccCCCchhhH-----------hhhhcCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011091          268 TTLYQMFVLFTTSNNPDVWI-----------PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDR  336 (494)
Q Consensus       268 ~s~~tLf~l~Tt~~w~dvm~-----------p~~~~~~~~~ifFi~~iii~~~illNLfiAVI~~~F~~~~~~~~~~~~~  336 (494)
                      +|+++||++.|-+||.+|||           |..++|+|..+|||+|.+|..|+++|||++|+.+||.+.++++.+++..
T Consensus      1322 qalmSLFvLaSkDgWv~ImyDgldavavdqqPI~nhnpwmllYfIsfllIvsffVlnmfVgvvvenfhKcrqhqe~EeAr 1401 (1956)
T KOG2302|consen 1322 QALMSLFVLASKDGWVNIMYDGLDAVAVDQQPILNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEAR 1401 (1956)
T ss_pred             HHHHHHHHHhcccchhhhhccchhhceeeeeccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999996           5567899999999999999999999999999999999988777655444


Q ss_pred             HHHHHHHHHHHhhccCCCcccCHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHhcccCCCccCHHHHHHHHHHHhhhhcc
Q 011091          337 MRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQK  416 (494)
Q Consensus       337 ~rr~~l~~af~~L~~~~~g~l~~~~~~~l~~~l~~~~~~p~~~~~~~~~lf~~ld~~~~~~I~~~eF~~l~~~i~~~~~~  416 (494)
                      +|.++                       +++.+.+.+                                        .+.
T Consensus      1402 RreEK-----------------------rLrrlekkr----------------------------------------R~A 1418 (1956)
T KOG2302|consen 1402 RREEK-----------------------RLRRLEKKR----------------------------------------RAA 1418 (1956)
T ss_pred             HHHHH-----------------------HHHHHHHHH----------------------------------------Hhc
Confidence            33322                       122221100                                        011


Q ss_pred             cCCccccccCCCCcccHHHHHHHhcccccchhHHHHHHHHHHHHHHHHhhccc-------hhhhhHHHHHHHHHHHHHHH
Q 011091          417 EDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTVW-------LEFIDSNFLCLFLINICDIC  489 (494)
Q Consensus       417 ~~~~~~~~~~P~~y~s~~~~~l~~~v~~~~F~~~i~~iillN~i~l~~e~~~~-------~~~~~~~F~~iF~~Ei~~~~  489 (494)
                      ++.|-+     .. .+..++.+++.+.+.|-+.++.++|.+|.|.++.|++.+       +.+.||.|+++|+.|+.+|.
T Consensus      1419 q~kpyy-----se-yt~~rrlIh~~ctShyld~fit~ii~LnvVtms~ehyqqp~sldealkycny~ft~vfV~EaV~kl 1492 (1956)
T KOG2302|consen 1419 QRKPYY-----SE-YTMTRRLIHSKCTSHYLDQFITFIICLNVVTMSEEHYQQPTSLDEALKYCNYRFTAVFVLEAVLKL 1492 (1956)
T ss_pred             cCCccc-----cc-ccHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHHhhhcceeeeehhHHHHHHHH
Confidence            222221     12 366889999999999999999999999999999999855       45999999999999999998


Q ss_pred             hhc
Q 011091          490 LNK  492 (494)
Q Consensus       490 ~~~  492 (494)
                      .+.
T Consensus      1493 vaf 1495 (1956)
T KOG2302|consen 1493 VAF 1495 (1956)
T ss_pred             HHH
Confidence            764

>KOG2301 consensus Voltage-gated Ca2+ channels, alpha1 subunits [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG2301 consensus Voltage-gated Ca2+ channels, alpha1 subunits [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG2302 consensus T-type voltage-gated Ca2+ channel, pore-forming alpha1I subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins	Back alignment and domain information

>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]	Back alignment and domain information

>PLN03223 Polycystin cation channel protein; Provisional	Back alignment and domain information

>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys	Back alignment and domain information

>KOG3599 consensus Ca2+-modulated nonselective cation channel polycystin [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG4390 consensus Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00870 trp transient-receptor-potential calcium channel protein	Back alignment and domain information

>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>PLN03192 Voltage-dependent potassium channel; Provisional	Back alignment and domain information

>KOG3614 consensus Ca2+/Mg2+-permeable cation channels (LTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E	Back alignment and domain information

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13	Back alignment and domain information

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B	Back alignment and domain information

>smart00027 EH Eps15 homology domain	Back alignment and domain information

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction	Back alignment and domain information

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]	Back alignment and domain information

>KOG3533 consensus Inositol 1,4,5-trisphosphate receptor [Signal transduction mechanisms]	Back alignment and domain information

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z	Back alignment and domain information

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]	Back alignment and domain information

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif	Back alignment and domain information

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10	Back alignment and domain information

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1	Back alignment and domain information

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands	Back alignment and domain information

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11	Back alignment and domain information

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A	Back alignment and domain information

>PTZ00184 calmodulin; Provisional	Back alignment and domain information

>PRK10537 voltage-gated potassium channel; Provisional	Back alignment and domain information

>PTZ00183 centrin; Provisional	Back alignment and domain information

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6	Back alignment and domain information

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]	Back alignment and domain information

>KOG3733 consensus Mucolipidin and related proteins (TRML subfamily of transient receptor potential proteins) [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand	Back alignment and domain information

>PTZ00184 calmodulin; Provisional	Back alignment and domain information

>PTZ00183 centrin; Provisional	Back alignment and domain information

>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)	Back alignment and domain information

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]	Back alignment and domain information

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]	Back alignment and domain information

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]	Back alignment and domain information

>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A	Back alignment and domain information

>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A	Back alignment and domain information

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10	Back alignment and domain information

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12	Back alignment and domain information

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]	Back alignment and domain information

>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A	Back alignment and domain information

>PF14658 EF-hand_9: EF-hand domain	Back alignment and domain information

>PLN02964 phosphatidylserine decarboxylase	Back alignment and domain information

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B	Back alignment and domain information

>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]	Back alignment and domain information

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]	Back alignment and domain information

>PF07885 Ion_trans_2: Ion channel; InterPro: IPR013099 This entry includes the two membrane helix type ion channels found in bacteria []	Back alignment and domain information

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]	Back alignment and domain information

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]	Back alignment and domain information

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional	Back alignment and domain information

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]	Back alignment and domain information

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]	Back alignment and domain information

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]	Back alignment and domain information

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand	Back alignment and domain information

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]	Back alignment and domain information

>PLN02964 phosphatidylserine decarboxylase	Back alignment and domain information

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]	Back alignment and domain information

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B	Back alignment and domain information

>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]	Back alignment and domain information

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]	Back alignment and domain information

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		494
3rvy_A		285	ION transport protein; tetrameric ION channel, vol	8e-13
4dxw_A		229	Navrh, ION transport protein; tetrameric, voltage-	6e-12
1wlz_A		105	DJBP, CAP-binding protein complex interacting prot	3e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04
2pmy_A		91	RAS and EF-hand domain-containing protein; rasef,	2e-05
2kgr_A		111	Intersectin-1; structure, alternative splicing, ca	3e-04
2be4_A		272	Hypothetical protein LOC449832; DR.36843, BC083168	5e-04
2sas_A		185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	5e-04
1ij5_A		323	Plasmodial specific LAV1-2 protein; fourty kDa cal	6e-04

>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 3rw0_A* Length = 285	Back alignment and structure

 Score = 67.8 bits (166), Expect = 8e-13
 Identities = 32/144 (22%), Positives = 69/144 (47%), Gaps = 3/144 (2%)

Query: 181 DFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLL 240
           DF V  + L P +  F  LR+   +R+   +  + Q+R  +  L  ++   L+V+AL  L
Sbjct: 98  DFFVVAISLVPTSSGFEILRVLRVLRLFRLVTAVPQMRKIVSALISVIPGMLSVIALMTL 157

Query: 241 FLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSN-NPDVWIPAYKASRWYCLF 299
           F    + +A  +F +       F + G + Y +F + T  + +  +  P  +   +  +F
Sbjct: 158 FFYIFAIMATQLFGERFPEW--FGTLGESFYTLFQVMTLESWSMGIVRPLMEVYPYAWVF 215

Query: 300 FVLYVLIGVYFVTNLILAVVYDSF 323
           F+ ++ +  + + NL++A+  D+ 
Sbjct: 216 FIPFIFVVTFVMINLVVAICVDAM 239

PyMOL of 3rvy

>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114} Length = 229	Back alignment and structure

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91	Back alignment and structure

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111	Back alignment and structure

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272	Back alignment and structure

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185	Back alignment and structure

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		494
4dxw_A		229	Navrh, ION transport protein; tetrameric, voltage-	100.0
3rvy_A		285	ION transport protein; tetrameric ION channel, vol	100.0
2r9r_B		514	Paddle chimera voltage gated potassium channel KV;	99.88
4f4l_A		112	ION transport protein; alpha helical membrane prot	99.87
3beh_A		355	MLL3241 protein; transmembrane protein, membrane p	99.72
1orq_C		223	Potassium channel; voltage-dependent, KVAP, FAB co	99.52
1ors_C		132	Potassium channel; voltage-dependent, voltage sens	99.09
2a9h_A		155	Voltage-gated potassium channel; potassium channel	98.4
2kyh_A		147	KVAP, voltage-gated potassium channel; ION channel	98.22
1fi6_A		92	EH domain protein REPS1; EPS15 homology domain, EF	98.12
2ih3_C		122	Voltage-gated potassium channel; ION channel D-ami	98.09
1eh2_A		106	EPS15; calcium binding, signaling domain, NPF bind	98.05
2lv7_A		100	Calcium-binding protein 7; metal binding protein;	98.01
1c07_A		95	Protein (epidermal growth factor receptor pathway	98.01
1qjt_A		99	EH1, epidermal growth factor receptor substrate su	97.95
2jq6_A		139	EH domain-containing protein 1; metal binding prot	97.83
1tiz_A		67	Calmodulin-related protein, putative; helix-turn-h	97.82
2kgr_A		111	Intersectin-1; structure, alternative splicing, ca	97.82
2kz2_A		94	Calmodulin, CAM; TR2C, metal binding protein; NMR	97.79
3fia_A		121	Intersectin-1; EH 1 domain, NESG, structural genom	97.78
1iq3_A		110	Ralbp1-interacting protein (partner of ralbp1); EF	97.77
1avs_A		90	Troponin C; muscle contraction, calcium-activated,	97.74
2obh_A		143	Centrin-2; DNA repair complex EF hand superfamily	97.72
2joj_A		77	Centrin protein; N-terminal domain, centrin soluti	97.71
1wlz_A		105	DJBP, CAP-binding protein complex interacting prot	97.7
2ktg_A		85	Calmodulin, putative; ehcam, Ca-binding protein, p	97.69
2lmt_A		148	Calmodulin-related protein 97A; spermatogenesis, m	97.69
3li6_A		66	Calcium-binding protein; calcium signaling protein	97.69
2opo_A		86	Polcalcin CHE A 3; calcium-binding protein, dimer,	97.66
3rvy_A		285	ION transport protein; tetrameric ION channel, vol	97.65
2pmy_A		91	RAS and EF-hand domain-containing protein; rasef,	97.65
2kn2_A		92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	97.64
1k9u_A		78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	97.63
1ors_C		132	Potassium channel; voltage-dependent, voltage sens	97.6
2b1u_A		71	Calmodulin-like protein 5; CLSP, calmodulin-like S	97.59
3n22_A		98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	97.58
1exr_A		148	Calmodulin; high resolution, disorder, metal trans	97.58
3i5g_C		159	Myosin catalytic light chain LC-1, mantle muscle;	97.57
1k2h_A		93	S100A1, S-100 protein, alpha chain; non-covalent h	97.57
3eff_K		139	Voltage-gated potassium channel; FULL length KCSA,	97.56
3rm1_A		92	Protein S100-B; alpha-helical, EF hand, metal bind	97.56
4eto_A		93	Protein S100-A4; calcium-binding protein, EF-hand,	97.52
5pal_A		109	Parvalbumin; calcium-binding protein; 1.54A {Triak	97.51
3nso_A		101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	97.51
1yx7_A		83	Calsensin, LAN3-6 antigen; calcium-binding protein	97.5
3qrx_A		169	Centrin; calcium-binding, EF-hand, cell division,	97.49
1qx2_A		76	Vitamin D-dependent calcium-binding protein, INTE;	97.49
1top_A		162	Troponin C; contractIle system protein; 1.78A {Gal	97.47
3zwh_A		104	Protein S100-A4; Ca-binding protein-motor protein	97.45
1rwy_A		109	Parvalbumin alpha; EF-hand, calcium-binding, calci	97.45
1xk4_C		113	Calgranulin B; S100 family, heterotetramer, metal	97.44
2lhi_A		176	Calmodulin, serine/threonine-protein phosphatase c	97.44
1j7q_A		86	CAVP, calcium vector protein; EF-hand family, calc	97.44
2lnk_A		113	Protein S100-A4; EF-hand, calcium binding, all alp	97.43
2pvb_A		108	Protein (parvalbumin); calcium binding protein, me	97.42
3fs7_A		109	Parvalbumin, thymic; calcium-binding protein, EF-h	97.42
4dxw_A		229	Navrh, ION transport protein; tetrameric, voltage-	97.42
2d58_A		107	Allograft inflammatory factor 1; EF-hand, metal bi	97.41
2ovk_C		159	Myosin catalytic light chain LC-1, mantle muscle,	97.41
1bu3_A		109	Calcium-binding protein; 1.65A {Merluccius bilinea	97.4
2mys_C		149	Myosin; muscle protein, motor protein; HET: MLY; 2	97.39
1qv0_A		195	Obelin, OBL; photoprotein, bioluminescence, atomic	97.39
3nxa_A		100	Protein S100-A16; S100 family, calcium binding pro	97.37
1pva_A		110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	97.36
3h4s_E		135	KCBP interacting Ca2+-binding protein; kinesin, mo	97.36
1c7v_A		81	CAVP, calcium vector protein; EF-hand family, calc	97.36
3fwb_A		161	Cell division control protein 31; gene gating, com	97.34
1q80_A		174	SCP, sarcoplasmic calcium-binding protein; all-alp	97.34
3ox6_A		153	Calcium-binding protein 1; EF-hand, calcium-sensor	97.33
2y5i_A		99	S100Z, S100 calcium binding protein Z; metal-bindi	97.3
4ds7_A		147	Calmodulin, CAM; protein binding, metal binding, s	97.3
2ccm_A		191	Calexcitin; EF hand, calcium, signaling protein; 1	97.29
1m45_A		148	MLC1P, myosin light chain; protein-peptide complex	97.25
1uhk_A		191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	97.23
1j55_A		95	S-100P protein; metal binding protein; 2.00A {Homo	97.23
3i5g_B		153	Myosin regulatory light chain LC-2, mantle muscle;	97.22
2mys_B		166	Myosin; muscle protein, motor protein; HET: MLY; 2	97.21
1rro_A		108	RAT oncomodulin; calcium-binding protein; 1.30A {R	97.21
3j04_B		143	Myosin regulatory light chain 2, smooth muscle MA	97.2
1k8u_A		90	S100A6, calcyclin, CACY; calcium regulatory protei	97.2
3vou_A		148	ION transport 2 domain protein, voltage-gated SOD	97.19
1w7j_B		151	Myosin light chain 1; motor protein, unconventiona	97.19
2jjz_A		150	Ionized calcium-binding adapter molecule 2; EF-han	97.19
2f2o_A		179	Calmodulin fused with calmodulin-binding domain of	97.18
2kax_A		92	Protein S100-A5; EF-hand, calcium binding protien,	97.16
2hpk_A		208	Photoprotein berovin; structural genomics, PSI, pr	97.15
2bl0_B		145	Myosin regulatory light chain; muscle protein, sli	97.14
3akb_A		166	Putative calcium binding protein; EF-hand, metal b	97.12
1wy9_A		147	Allograft inflammatory factor 1; EF-hand, calucium	97.12
1ggw_A		140	Protein (CDC4P); light chain, cytokinesis, cell cy	97.12
2bl0_C		142	Myosin regulatory light chain; muscle protein, sli	97.11
2wcb_A		95	Protein S100-A12; calcium signalling, HOST-parasit	97.11
1xk4_A		93	Calgranulin A; S100 family, heterotetramer, metal	97.1
1cb1_A		78	Calbindin D9K; calcium-binding protein; NMR {Sus s	97.1
1s6j_A		87	CDPK, calcium-dependent protein kinase SK5; EF-han	97.09
1dtl_A		161	Cardiac troponin C; helix-turn-helix, structural p	97.08
1y1x_A		191	Leishmania major homolog of programmed cell death	97.08
2jnf_A		158	Troponin C; stretch activated muscle contraction,	97.08
1qls_A		99	S100C protein, calgizzarin; metal-binding protein/	97.07
2bl0_C		142	Myosin regulatory light chain; muscle protein, sli	97.07
4drw_A		121	Protein S100-A10/annexin A2 chimeric protein; atyp	97.06
3qrx_A		169	Centrin; calcium-binding, EF-hand, cell division,	97.04
3u0k_A		440	Rcamp; fluorescent protein, calcium binding, EF-ha	97.03
2kav_A		129	Sodium channel protein type 2 subunit alpha; volta	97.01
1wdc_C		156	Scallop myosin; calcium binding protein, muscle pr	97.01
2jnf_A		158	Troponin C; stretch activated muscle contraction,	97.0
2bec_A		202	Calcineurin B homologous protein 2; calcineurin-ho	97.0
3ll8_B		155	Calcineurin subunit B type 1; protein-peptide dock	97.0
3fwb_A		161	Cell division control protein 31; gene gating, com	96.99
2obh_A		143	Centrin-2; DNA repair complex EF hand superfamily	96.98
1nya_A		176	Calerythrin; EF-hand, metal binding protein; NMR {	96.97
4h33_A		137	LMO2059 protein; bilayers, KVLM, lipidic cubic pha	96.96
2h2k_A		106	Protein S100-A13; calcium binding protein, metal b	96.95
2ct9_A		208	Calcium-binding protein P22; EF-hand, metal bindin	96.94
2ovk_B		153	RLC, myosin regulatory light chain LC-2, mantle mu	96.94
2znd_A		172	Programmed cell death protein 6; penta-EF-hand pro	96.94
4ds7_A		147	Calmodulin, CAM; protein binding, metal binding, s	96.94
3sjs_A		220	URE3-BP sequence specific DNA binding protein; EF-	96.93
3ox6_A		153	Calcium-binding protein 1; EF-hand, calcium-sensor	96.93
2f2o_A		179	Calmodulin fused with calmodulin-binding domain of	96.92
1exr_A		148	Calmodulin; high resolution, disorder, metal trans	96.91
2sas_A		185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	96.9
1wdc_B		156	Scallop myosin; calcium binding protein, muscle pr	96.89
2l4h_A		214	Calcium and integrin-binding protein 1; metal bind	96.88
1top_A		162	Troponin C; contractIle system protein; 1.78A {Gal	96.88
1dtl_A		161	Cardiac troponin C; helix-turn-helix, structural p	96.86
3mse_B		180	Calcium-dependent protein kinase, putative; CDPKS,	96.84
3k21_A		191	PFCDPK3, calcium-dependent protein kinase 3; calci	96.82
2aao_A		166	CDPK, calcium-dependent protein kinase, isoform AK	96.82
2kyh_A		147	KVAP, voltage-gated potassium channel; ION channel	96.8
3dd4_A		229	KV channel-interacting protein 4; EF-hands protein	96.79
3e3r_A		204	Calcyphosin, calcyphosine; human calcyphosine, EF-	96.78
3a8r_A		179	Putative uncharacterized protein; EF-hand, membran	96.78
3khe_A		191	Calmodulin-like domain protein kinase isoform 3; c	96.77
1dgu_A		183	Calcium-saturated CIB; helical, EF-hands, blood cl	96.75
1a4p_A		96	S100A10; S100 family, EF-hand protein, ligand of a	96.75
1s6c_A		183	KV4 potassium channel-interacting protein kchip1B;	96.74
3u0k_A		440	Rcamp; fluorescent protein, calcium binding, EF-ha	96.72
2k1e_A		103	Water soluble analogue of potassium channel, KCSA;	96.71
1jfj_A		134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	96.7
1psr_A		100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	96.7
3pm8_A		197	PFCDPK2, calcium-dependent protein kinase 2; malar	96.67
1snl_A		103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	96.66
1gjy_A		167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	96.65
2l2e_A		190	Calcium-binding protein NCS-1; NCS1P, myristoylate	96.64
3nyv_A		484	Calmodulin-domain protein kinase 1; serine/threoni	96.64
3k21_A		191	PFCDPK3, calcium-dependent protein kinase 3; calci	96.63
3dtp_E		196	RLC, myosin regulatory light chain; muscle protein	96.62
2qac_A		146	Myosin A tail domain interacting protein MTIP; mal	96.6
1nya_A		176	Calerythrin; EF-hand, metal binding protein; NMR {	96.6
2ggz_A		211	Guanylyl cyclase-activating protein 3; EF hand, gu	96.59
2kyc_A		108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	96.58
1s1e_A		224	KV channel interacting protein 1; kchip, calcium-b	96.57
2hps_A		186	Coelenterazine-binding protein with bound coelent;	96.57
2mys_C		149	Myosin; muscle protein, motor protein; HET: MLY; 2	96.53
3sjs_A		220	URE3-BP sequence specific DNA binding protein; EF-	96.52
2aao_A		166	CDPK, calcium-dependent protein kinase, isoform AK	96.51
1k94_A		165	Grancalcin; penta-EF-hand protein, calcium binding	96.51
2i7a_A		174	Calpain 13; calcium-dependent cytoplasmic cysteine	96.5
1alv_A		173	Calpain, S-camld; calcium binding, calmodulin like	96.49
1g8i_A		190	Frequenin, neuronal calcium sensor 1; calcium bind	96.44
3cs1_A		219	Flagellar calcium-binding protein; myristoylated,	96.43
2jul_A		256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	96.41
3e3r_A		204	Calcyphosin, calcyphosine; human calcyphosine, EF-	96.4
1alv_A		173	Calpain, S-camld; calcium binding, calmodulin like	96.4
2r9r_B		514	Paddle chimera voltage gated potassium channel KV;	96.38
2sas_A		185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	96.37
2d8n_A		207	Recoverin; structural genomics, NPPSFA, national p	96.36
1y1x_A		191	Leishmania major homolog of programmed cell death	96.36
2be4_A		272	Hypothetical protein LOC449832; DR.36843, BC083168	96.34
1jba_A		204	GCAP-2, protein (guanylate cyclase activating prot	96.33
2znd_A		172	Programmed cell death protein 6; penta-EF-hand pro	96.32
3pm8_A		197	PFCDPK2, calcium-dependent protein kinase 2; malar	96.32
1jba_A		204	GCAP-2, protein (guanylate cyclase activating prot	96.31
3a4u_B		143	Multiple coagulation factor deficiency protein 2;	96.31
1k94_A		165	Grancalcin; penta-EF-hand protein, calcium binding	96.31
1h8b_A		75	ACT-EF34, alpha-actinin 2, skeletal muscle isoform	96.3
1fpw_A		190	Yeast frequenin, calcium-binding protein NCS-1; EF	96.3
2q67_A		114	Potassium channel protein; inverted teepee, helix	96.29
2r2i_A		198	Guanylyl cyclase-activating protein 1; EF hand, GC	96.29
2ccm_A		191	Calexcitin; EF hand, calcium, signaling protein; 1	96.28
2lmt_A		148	Calmodulin-related protein 97A; spermatogenesis, m	96.27
1s6i_A		188	CDPK, calcium-dependent protein kinase SK5; EF-han	96.27
3akb_A		166	Putative calcium binding protein; EF-hand, metal b	96.26
1qv0_A		195	Obelin, OBL; photoprotein, bioluminescence, atomic	96.26
2lhi_A		176	Calmodulin, serine/threonine-protein phosphatase c	96.26
3i5g_B		153	Myosin regulatory light chain LC-2, mantle muscle;	96.26
2zfd_A		226	Calcineurin B-like protein 2; calcium binding prot	96.24
2lvv_A		226	Flagellar calcium-binding protein TB-24; EF-hand,	96.19
1bjf_A		193	Neurocalcin delta; calcium-binding, myristoylation	96.19
1juo_A		198	Sorcin; calcium-binding proteins, penta-EF-hand, P	96.19
2ehb_A		207	Calcineurin B-like protein 4; protein complex, Ca(	96.18
3mse_B		180	Calcium-dependent protein kinase, putative; CDPKS,	96.17
1m45_A		148	MLC1P, myosin light chain; protein-peptide complex	96.14
1uhk_A		191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	96.13
3q5i_A		504	Protein kinase; CDPK, malaria, phosphotransferase,	96.08
1gjy_A		167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	96.0
3sg6_A		450	Gcamp2, myosin light chain kinase, green fluoresce	96.0
1juo_A		198	Sorcin; calcium-binding proteins, penta-EF-hand, P	95.99
3khe_A		191	Calmodulin-like domain protein kinase isoform 3; c	95.99
1wdc_C		156	Scallop myosin; calcium binding protein, muscle pr	95.99
2qks_A		321	KIR3.1-prokaryotic KIR channel chimera; G-protein	95.99
1fpw_A		190	Yeast frequenin, calcium-binding protein NCS-1; EF	95.98
3lij_A		494	Calcium/calmodulin dependent protein kinase with A	95.95
1w7j_B		151	Myosin light chain 1; motor protein, unconventiona	95.93
2f33_A		263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	95.88
1s6c_A		183	KV4 potassium channel-interacting protein kchip1B;	95.83
2r2i_A		198	Guanylyl cyclase-activating protein 1; EF hand, GC	95.82
2hpk_A		208	Photoprotein berovin; structural genomics, PSI, pr	95.81
2l2e_A		190	Calcium-binding protein NCS-1; NCS1P, myristoylate	95.8
2d8n_A		207	Recoverin; structural genomics, NPPSFA, national p	95.73
1jfj_A		134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	95.69
1s6i_A		188	CDPK, calcium-dependent protein kinase SK5; EF-han	95.65
3q5i_A		504	Protein kinase; CDPK, malaria, phosphotransferase,	95.64
1xl4_A		301	Inward rectifier potassium channel; integral membr	95.61
3sg6_A		450	Gcamp2, myosin light chain kinase, green fluoresce	95.61
1ij5_A		323	Plasmodial specific LAV1-2 protein; fourty kDa cal	95.59
1bjf_A		193	Neurocalcin delta; calcium-binding, myristoylation	95.58
3mwu_A		486	Calmodulin-domain protein kinase 1; serine/threoni	95.56
2ggz_A		211	Guanylyl cyclase-activating protein 3; EF hand, gu	95.55
3ll8_B		155	Calcineurin subunit B type 1; protein-peptide dock	95.44
2f33_A		263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	95.43
3dd4_A		229	KV channel-interacting protein 4; EF-hands protein	95.39
2bl0_B		145	Myosin regulatory light chain; muscle protein, sli	95.38
1g8i_A		190	Frequenin, neuronal calcium sensor 1; calcium bind	95.34
1s1e_A		224	KV channel interacting protein 1; kchip, calcium-b	95.33
2jul_A		256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	95.29
2ovk_C		159	Myosin catalytic light chain LC-1, mantle muscle,	95.18
2zfd_A		226	Calcineurin B-like protein 2; calcium binding prot	95.11
2ehb_A		207	Calcineurin B-like protein 4; protein complex, Ca(	95.02
3j04_B		143	Myosin regulatory light chain 2, smooth muscle MA	95.0
3mwu_A		486	Calmodulin-domain protein kinase 1; serine/threoni	94.97
1ggw_A		140	Protein (CDC4P); light chain, cytokinesis, cell cy	94.93
3a4u_B		143	Multiple coagulation factor deficiency protein 2;	94.83
1q80_A		174	SCP, sarcoplasmic calcium-binding protein; all-alp	94.79
1qg9_A		26	Protein (sodium channel protein, brain II alpha su	94.74
3nyv_A		484	Calmodulin-domain protein kinase 1; serine/threoni	94.72
3ouf_A		97	Potassium channel protein; ION channel, membrane,	94.71
1wdc_B		156	Scallop myosin; calcium binding protein, muscle pr	94.68
2bec_A		202	Calcineurin B homologous protein 2; calcineurin-ho	94.68
3bow_A		714	Calpain-2 catalytic subunit; cysteine protease, in	94.43
3lij_A		494	Calcium/calmodulin dependent protein kinase with A	94.35
1sjj_A		863	Actinin; 3-helix bundle, calponin homology domain,	94.22
2be4_A		272	Hypothetical protein LOC449832; DR.36843, BC083168	94.22
3um7_A		309	Potassium channel subfamily K member 4; potassium	94.1
2ovk_B		153	RLC, myosin regulatory light chain LC-2, mantle mu	93.9
1dgu_A		183	Calcium-saturated CIB; helical, EF-hands, blood cl	93.89
3fs7_A		109	Parvalbumin, thymic; calcium-binding protein, EF-h	93.88
2mys_B		166	Myosin; muscle protein, motor protein; HET: MLY; 2	93.87
3i5g_C		159	Myosin catalytic light chain LC-1, mantle muscle;	93.81
2lvv_A		226	Flagellar calcium-binding protein TB-24; EF-hand,	93.78
1rwy_A		109	Parvalbumin alpha; EF-hand, calcium-binding, calci	93.78
3bow_A		714	Calpain-2 catalytic subunit; cysteine protease, in	93.63
2qac_A		146	Myosin A tail domain interacting protein MTIP; mal	93.6
5pal_A		109	Parvalbumin; calcium-binding protein; 1.54A {Triak	93.54
1bu3_A		109	Calcium-binding protein; 1.65A {Merluccius bilinea	93.53
2l4h_A		214	Calcium and integrin-binding protein 1; metal bind	93.49
2kld_A		123	Polycystin-2; PC2, PKD2, calcium binding domain, E	93.3
1p7b_A		333	Integral membrane channel and cytosolic domains; t	93.28
1djx_A		624	PLC-D1, phosphoinositide-specific phospholipase C,	93.26
2pvb_A		108	Protein (parvalbumin); calcium binding protein, me	93.23
1eg3_A		261	Dystrophin; EF-hand like domain, WW domain, struct	93.18
3ldc_A		82	Calcium-gated potassium channel MTHK; transmembran	93.1
3dtp_E		196	RLC, myosin regulatory light chain; muscle protein	92.98
2lcm_A		28	Voltage-dependent N-type calcium channel subunit;	92.98
1pva_A		110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	92.91
3ukm_A		280	Potassium channel subfamily K member 1; membrane p	92.75
1rro_A		108	RAT oncomodulin; calcium-binding protein; 1.30A {R	92.53
2i7a_A		174	Calpain 13; calcium-dependent cytoplasmic cysteine	92.45
3h4s_E		135	KCBP interacting Ca2+-binding protein; kinesin, mo	92.43
1qxp_A		900	MU-like calpain; M-calpain, MU-calpain, catalytic	92.18
4gx0_A		565	TRKA domain protein; membrane protein, ION channel	91.98
3spc_A		343	Inward-rectifier K+ channel KIR2.2; PIP, membrane	91.86
3sya_A		340	G protein-activated inward rectifier potassium CH;	91.84
2ct9_A		208	Calcium-binding protein P22; EF-hand, metal bindin	91.66
3pjs_K		166	KCSA, voltage-gated potassium channel; ION channel	91.44
1ij5_A		323	Plasmodial specific LAV1-2 protein; fourty kDa cal	91.32
1sra_A		151	Sparc; extracellular matrix protein, calcium-bindi	90.43
3cs1_A		219	Flagellar calcium-binding protein; myristoylated,	90.08
2qpt_A		550	EH domain-containing protein-2; protein-nucleotide	89.05
2hps_A		186	Coelenterazine-binding protein with bound coelent;	88.88
2zkm_X		799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	88.75
3a8r_A		179	Putative uncharacterized protein; EF-hand, membran	88.42
2kyc_A		108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	87.09
1eg3_A		261	Dystrophin; EF-hand like domain, WW domain, struct	86.92
1djx_A		624	PLC-D1, phosphoinositide-specific phospholipase C,	86.03
1qg9_A		26	Protein (sodium channel protein, brain II alpha su	85.21
2lv7_A		100	Calcium-binding protein 7; metal binding protein;	82.23
1nub_A		229	Basement membrane protein BM-40; extracellular mod	80.64
3ukm_A		280	Potassium channel subfamily K member 1; membrane p	80.48
2kz2_A		94	Calmodulin, CAM; TR2C, metal binding protein; NMR	80.28

>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}	Back alignment and structure

Probab=100.00  E-value=7.3e-35  Score=281.54  Aligned_cols=180  Identities=18%  Similarity=0.307  Sum_probs=156.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcc-cchhhccccccchhHHHHHHHHHHHHHHhhcCCcCCcchhhhHhHHHHHHHHhcccH
Q 011091          137 VYEGITLVILIIHTFFPITYEG-SPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIR  215 (494)
Q Consensus       137 i~E~i~l~iF~~E~~lk~~~~g-~~~y~~~~wN~~d~ivvv~~~id~i~~~~~~~~~~~~~~~lR~~R~lR~lrli~~~~  215 (494)
                      .+|.+|+++|++|+++|+++.| +++|++++||++|++++++++++....        ...+.+|.+|++|++|+++.++
T Consensus        46 ~~e~~~~~iF~~E~~lri~~~~~~~~y~~~~wni~D~~~v~~~~i~~~~~--------~~~~~lr~~RilR~lrl~~~~~  117 (229)
T 4dxw_A           46 LLDYGITIFFVIEILIRFIGEKQKADFFKSGWNIFDTVIVAISLIPIPNN--------SSFLVLRLLRIFRVLRLISVIP  117 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC---------CHHHHHHHHHHHHTTCC----------------CCTTHHHHHHTTHHHHCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCchhHHhcCCcHHHHHHHHHHHHhhcCcc--------HHHHHHHHHHHHHHHHHHHHhH
Confidence            4799999999999999999986 578999999999999998887654211        2346779999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCcHHHHHHHHHhHhccCCCchhhHhhhhcCcc
Q 011091          216 QLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRW  295 (494)
Q Consensus       216 ~lr~l~~~l~~sl~~i~~v~~ll~l~~~ifAilg~~lF~~~~~g~~~F~~~~~s~~tLf~l~Tt~~w~dvm~p~~~~~~~  295 (494)
                      ++|.+.+++.++.|+++++++++++++++||++|+++|++..+  .+|+|+++|++++|+++|+|||+|+|+++++.++|
T Consensus       118 ~l~~l~~~l~~s~~~l~~~~~~l~~~~~ifa~~g~~lf~~~~~--~~F~~~~~a~~~lf~~~t~~~w~~i~~~~~~~~~~  195 (229)
T 4dxw_A          118 ELKQIIEAILESVRRVFFVSLLLFIILYIYATMGAILFGNDDP--SRWGDLGISLITLFQVLTLSSWETVMLPMQEIYWW  195 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSC--TTTSSHHHHHHHHHHHHTTSSTHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc--ccccCHHHHHHHHHHHHccCCHHHHHHHHHHhCCc
Confidence            9999999999999999999999999999999999999999764  68999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011091          296 YCLFFVLYVLIGVYFVTNLILAVVYDSFKSQ  326 (494)
Q Consensus       296 ~~ifFi~~iii~~~illNLfiAVI~~~F~~~  326 (494)
                      +++||++|+++++++++||++|+++|||++.
T Consensus       196 ~~~~f~~~~~i~~~i~lNlfiavi~~~f~~~  226 (229)
T 4dxw_A          196 SWVYFFSFIIICSITILNLVIAILVDVVIQK  226 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999865

PyMOL of 4dxw

>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*	Back alignment and structure

>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*	Back alignment and structure

>4f4l_A ION transport protein; alpha helical membrane protein, voltage-gated sodium channel membrane, metal transport; 3.49A {Magnetococcus marinus}	Back alignment and structure

>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*	Back alignment and structure

>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A	Back alignment and structure

>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1	Back alignment and structure

>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1	Back alignment and structure

>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix}	Back alignment and structure

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6	Back alignment and structure

>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ...	Back alignment and structure

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A	Back alignment and structure

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}	Back alignment and structure

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6	Back alignment and structure

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6	Back alignment and structure

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A	Back alignment and structure

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5	Back alignment and structure

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}	Back alignment and structure

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}	Back alignment and structure

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A	Back alignment and structure

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6	Back alignment and structure

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A	Back alignment and structure

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A	Back alignment and structure

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}	Back alignment and structure

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7	Back alignment and structure

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A	Back alignment and structure

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}	Back alignment and structure

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A	Back alignment and structure

>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*	Back alignment and structure

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}	Back alignment and structure

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}	Back alignment and structure

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10	Back alignment and structure

>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1	Back alignment and structure

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}	Back alignment and structure

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...	Back alignment and structure

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C	Back alignment and structure

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A	Back alignment and structure

>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans}	Back alignment and structure

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...	Back alignment and structure

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*	Back alignment and structure

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4	Back alignment and structure

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A	Back alignment and structure

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A	Back alignment and structure

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A	Back alignment and structure

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A	Back alignment and structure

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...	Back alignment and structure

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}	Back alignment and structure

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A	Back alignment and structure

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*	Back alignment and structure

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}	Back alignment and structure

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A	Back alignment and structure

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A	Back alignment and structure

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A	Back alignment and structure

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A	Back alignment and structure

>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}	Back alignment and structure

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}	Back alignment and structure

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4	Back alignment and structure

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*	Back alignment and structure

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*	Back alignment and structure

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A	Back alignment and structure

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A	Back alignment and structure

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}	Back alignment and structure

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A	Back alignment and structure

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A	Back alignment and structure

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A	Back alignment and structure

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A	Back alignment and structure

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}	Back alignment and structure

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A	Back alignment and structure

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}	Back alignment and structure

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A	Back alignment and structure

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A	Back alignment and structure

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A	Back alignment and structure

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B	Back alignment and structure

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B	Back alignment and structure

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A	Back alignment and structure

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}	Back alignment and structure

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A	Back alignment and structure

>3vou_A ION transport 2 domain protein, voltage-gated SOD channel; 4-helical bundle, ION channel, membrane, transport protein; 3.20A {Bacillus weihenstephanensis}	Back alignment and structure

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C	Back alignment and structure

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A	Back alignment and structure

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A	Back alignment and structure

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A	Back alignment and structure

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}	Back alignment and structure

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}	Back alignment and structure

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A	Back alignment and structure

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A	Back alignment and structure

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5	Back alignment and structure

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}	Back alignment and structure

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A	Back alignment and structure

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A	Back alignment and structure

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1	Back alignment and structure

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5	Back alignment and structure

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...	Back alignment and structure

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8	Back alignment and structure

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A	Back alignment and structure

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A	Back alignment and structure

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}	Back alignment and structure

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}	Back alignment and structure

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A	Back alignment and structure

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}	Back alignment and structure

>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A	Back alignment and structure

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...	Back alignment and structure

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A	Back alignment and structure

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}	Back alignment and structure

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*	Back alignment and structure

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A	Back alignment and structure

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A	Back alignment and structure

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5	Back alignment and structure

>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A	Back alignment and structure

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A	Back alignment and structure

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A	Back alignment and structure

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A	Back alignment and structure

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A	Back alignment and structure

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A	Back alignment and structure

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A	Back alignment and structure

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A	Back alignment and structure

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...	Back alignment and structure

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5	Back alignment and structure

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...	Back alignment and structure

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A	Back alignment and structure

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...	Back alignment and structure

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...	Back alignment and structure

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}	Back alignment and structure

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A	Back alignment and structure

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}	Back alignment and structure

>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix}	Back alignment and structure

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A	Back alignment and structure

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}	Back alignment and structure

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}	Back alignment and structure

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}	Back alignment and structure

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*	Back alignment and structure

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A	Back alignment and structure

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E	Back alignment and structure

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}	Back alignment and structure

>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A	Back alignment and structure

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A	Back alignment and structure

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A	Back alignment and structure

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}	Back alignment and structure

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7	Back alignment and structure

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8	Back alignment and structure

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}	Back alignment and structure

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*	Back alignment and structure

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A	Back alignment and structure

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}	Back alignment and structure

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A	Back alignment and structure

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5	Back alignment and structure

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}	Back alignment and structure

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A	Back alignment and structure

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5	Back alignment and structure

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A	Back alignment and structure

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*	Back alignment and structure

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A	Back alignment and structure

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}	Back alignment and structure

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A	Back alignment and structure

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}	Back alignment and structure

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A	Back alignment and structure

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A	Back alignment and structure

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}	Back alignment and structure

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}	Back alignment and structure

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}	Back alignment and structure

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A	Back alignment and structure

>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*	Back alignment and structure

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5	Back alignment and structure

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A	Back alignment and structure

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8	Back alignment and structure

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A	Back alignment and structure

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5	Back alignment and structure

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A	Back alignment and structure

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}	Back alignment and structure

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5	Back alignment and structure

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C	Back alignment and structure

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A	Back alignment and structure

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A	Back alignment and structure

>2q67_A Potassium channel protein; inverted teepee, helix bundle, tetramer, central cavity, ION metal transport, membrane protein; 2.30A {Bacillus cereus} PDB: 2q68_A 2q6a_A 2q69_A 2ahy_A 2ahz_A	Back alignment and structure

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}	Back alignment and structure

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}	Back alignment and structure

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A	Back alignment and structure

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5	Back alignment and structure

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A	Back alignment and structure

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*	Back alignment and structure

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}	Back alignment and structure

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B	Back alignment and structure

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A	Back alignment and structure

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}	Back alignment and structure

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5	Back alignment and structure

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A	Back alignment and structure

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A	Back alignment and structure

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}	Back alignment and structure

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A	Back alignment and structure

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A	Back alignment and structure

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}	Back alignment and structure

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8	Back alignment and structure

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A	Back alignment and structure

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A	Back alignment and structure

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}	Back alignment and structure

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...	Back alignment and structure

>2qks_A KIR3.1-prokaryotic KIR channel chimera; G-protein gated inward rectifier, potassium channel selectivity filter, metal transport; HET: BNG; 2.20A {Burkholderia xenovorans}	Back alignment and structure

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A	Back alignment and structure

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*	Back alignment and structure

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C	Back alignment and structure

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A	Back alignment and structure

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E	Back alignment and structure

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}	Back alignment and structure

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}	Back alignment and structure

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}	Back alignment and structure

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A	Back alignment and structure

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A	Back alignment and structure

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5	Back alignment and structure

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}	Back alignment and structure

>1xl4_A Inward rectifier potassium channel; integral membrane protein, ION channel, inwardly rectifying channel, metal transport; 2.60A {Magnetospirillum magnetotacticum} SCOP: b.1.18.16 f.14.1.1 PDB: 1xl6_A* 2wlh_A 2wli_B 2wlj_A* 2wlk_A* 2wlm_A 2wlo_A 2wln_A 3zrs_A 2wli_A 2x6c_A* 2x6b_A* 2x6a_A*	Back alignment and structure

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A	Back alignment and structure

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A	Back alignment and structure

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5	Back alignment and structure

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*	Back alignment and structure

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}	Back alignment and structure

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*	Back alignment and structure

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A	Back alignment and structure

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A	Back alignment and structure

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}	Back alignment and structure

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A	Back alignment and structure

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5	Back alignment and structure

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}	Back alignment and structure

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A	Back alignment and structure

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A	Back alignment and structure

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}	Back alignment and structure

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*	Back alignment and structure

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5	Back alignment and structure

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C	Back alignment and structure

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A	Back alignment and structure

>1qg9_A Protein (sodium channel protein, brain II alpha subunit); transmembrane sodium channel, structure, transmembrane channel; NMR {Synthetic} SCOP: j.35.1.1	Back alignment and structure

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*	Back alignment and structure

>3ouf_A Potassium channel protein; ION channel, membrane, membrane protein; 1.55A {Bacillus cereus} PDB: 3t4z_A 3tcu_A 3t1c_A 3tet_A 3t4d_A 3t2m_A 3e86_A 3e83_A 3e89_A 3e8b_A 3e8f_A 3e8g_A 3e8h_A 3k0d_A 3k0g_A 3k06_A 3k08_A 3k04_A 3k03_A	Back alignment and structure

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...	Back alignment and structure

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}	Back alignment and structure

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L	Back alignment and structure

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*	Back alignment and structure

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1	Back alignment and structure

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A	Back alignment and structure

>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens}	Back alignment and structure

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*	Back alignment and structure

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A	Back alignment and structure

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B	Back alignment and structure

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C	Back alignment and structure

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}	Back alignment and structure

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A	Back alignment and structure

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L	Back alignment and structure

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A	Back alignment and structure

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4	Back alignment and structure

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4	Back alignment and structure

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A	Back alignment and structure

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A	Back alignment and structure

>1p7b_A Integral membrane channel and cytosolic domains; transmembrane helices, ION conduction, immunoglobulin fold, assembly; 3.65A {Burkholderia pseudomallei} SCOP: b.1.18.16 f.14.1.1 PDB: 2wll_B* 2wll_A*	Back alignment and structure

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A	Back alignment and structure

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A	Back alignment and structure

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A	Back alignment and structure

>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 4hyo_A 4hz3_D 3r65_A 3ous_A 3ldd_A	Back alignment and structure

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}	Back alignment and structure

>2lcm_A Voltage-dependent N-type calcium channel subunit; voltage sensor peptide, membrane protein; NMR {Homo sapiens}	Back alignment and structure

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A	Back alignment and structure

>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens}	Back alignment and structure

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A	Back alignment and structure

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}	Back alignment and structure

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}	Back alignment and structure

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3	Back alignment and structure

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*	Back alignment and structure

>3spc_A Inward-rectifier K+ channel KIR2.2; PIP, membrane protein, lipid, receptor, metal transport; HET: P8P; 2.45A {Gallus gallus} PDB: 3jyc_A* 3spi_A* 3sph_A* 3spj_A 3spg_A*	Back alignment and structure

>3sya_A G protein-activated inward rectifier potassium CH; ION channel, potassium channel, inward rectification, sodium PIP2 binding, G protein binding; HET: PIO; 2.98A {Mus musculus} PDB: 3syo_A 3syc_A 3syp_A 3syq_A*	Back alignment and structure

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A	Back alignment and structure

>3pjs_K KCSA, voltage-gated potassium channel; ION channel, conducts K+ IONS, cell membrane, transport PROT; 3.80A {Streptomyces lividans} PDB: 1f6g_A	Back alignment and structure

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A	Back alignment and structure

>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3	Back alignment and structure

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}	Back alignment and structure

>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}	Back alignment and structure

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A	Back alignment and structure

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B	Back alignment and structure

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}	Back alignment and structure

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A	Back alignment and structure

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A	Back alignment and structure

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A	Back alignment and structure

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}	Back alignment and structure

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*	Back alignment and structure

>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens}	Back alignment and structure

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		494
d1oqpa_		77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	1e-06
d1rwya_		109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	3e-06
d2pvba_		107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	5e-06
d1pvaa_		109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	6e-06
d2opoa1		81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	6e-06
d5pala_		109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	7e-06
d1fi5a_		81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	2e-05
d1rroa_		108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	2e-05
d1c7va_		68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	3e-05
d2fcea1		61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	3e-05
d1s6ja_		87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	6e-05
d1ij5a_		321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	8e-05
d1f54a_		77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	8e-05
d1topa_		162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	9e-05
d2obha1		141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	9e-05
d1fw4a_		65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	1e-04
d2pq3a1		73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	2e-04
d1avsa_		81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-04
d1dtla_		156	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-04
d1zfsa1		93	a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no	0.001
d1yuta1		98	a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa	0.001
d1jc2a_		75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	0.002
d1tiza_		67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	0.002
d1a4pa_		92	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.002
d1qjta_		99	a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId:	0.002
d3c1va1		93	a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa	0.003
d2jxca1		95	a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [	0.003
d1uhka1		187	a.39.1.5 (A:3-189) Calcium-regulated photoprotein	0.004

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77	Back information, alignment and structure


class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 44.1 bits (104), Expect = 1e-06
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)

Query: 335 DRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTH 394
           +R  R  + KAF L D+ N G +  +   ++ +EL +     N++ EE + +  E D   
Sbjct: 4   ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGE-----NLTEEELQEMIAEADRND 58

Query: 395 DFKINLDEFADL 406
           D +I+ DEF  +
Sbjct: 59  DNEIDEDEFIRI 70

PyMOL of d1oqpa_

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109	Back information, alignment and structure

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107	Back information, alignment and structure

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109	Back information, alignment and structure

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81	Back information, alignment and structure

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109	Back information, alignment and structure

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81	Back information, alignment and structure

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108	Back information, alignment and structure

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68	Back information, alignment and structure

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61	Back information, alignment and structure

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87	Back information, alignment and structure

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321	Back information, alignment and structure

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77	Back information, alignment and structure

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162	Back information, alignment and structure

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141	Back information, alignment and structure

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65	Back information, alignment and structure

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73	Back information, alignment and structure

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81	Back information, alignment and structure

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156	Back information, alignment and structure

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93	Back information, alignment and structure

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98	Back information, alignment and structure

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75	Back information, alignment and structure

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67	Back information, alignment and structure

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92	Back information, alignment and structure

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99	Back information, alignment and structure

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93	Back information, alignment and structure

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95	Back information, alignment and structure

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		494
d1orsc_		132	Potassium channel KVAP {Archaeon Aeropyrum pernix	99.0
d1wlza1		83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	98.21
d1oqpa_		77	Caltractin (centrin 2) {Green algae (Chlamydomonas	98.14
d1fw4a_		65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	98.1
d1tiza_		67	Calmodulin-related protein T21P5.17 {Thale cress (	98.09
d1fi6a_		92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	98.07
d2fcea1		61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	98.03
d1jc2a_		75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.01
d1qv0a_		189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	98.0
d2pq3a1		73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	97.99
d1avsa_		81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.98
d1fi5a_		81	Troponin C {Chicken (Gallus gallus), cardiac isofo	97.98
d1wrka1		82	Troponin C {Human (Homo sapiens), cardiac isoform	97.96
d1c07a_		95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	97.96
d1c7va_		68	Calcium vector protein {Amphioxus (Branchiostoma l	97.96
d1f54a_		77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	97.91
d1orsc_		132	Potassium channel KVAP {Archaeon Aeropyrum pernix	97.87
d1r3jc_		103	Potassium channel protein {Streptomyces coelicolor	97.84
d5pala_		109	Parvalbumin {Leopard shark (Triakis semifasciata)	97.83
d2opoa1		81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	97.82
d1rroa_		108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	97.79
d1rwya_		109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	97.79
d1uhka1		187	Calcium-regulated photoprotein {Jellyfish (Aequore	97.77
d2pvba_		107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	97.74
d2jxca1		95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	97.74
d1pvaa_		109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	97.72
d1zfsa1		93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	97.63
d2obha1		141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	97.6
d1exra_		146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	97.58
d1s6ja_		87	Calcium-dependent protein kinase sk5 CLD {Soybean	97.56
d2mysc_		145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	97.55
d1topa_		162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.55
d1lkja_		146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	97.51
d1qjta_		99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	97.51
d1iq3a_		110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	97.49
d2sasa_		185	Sarcoplasmic calcium-binding protein {Amphioxus (B	97.44
d1dtla_		156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.38
d1qx2a_		76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	97.36
d1ksoa_		93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	97.33
d3c1va1		93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	97.3
d1xo5a_		180	Calcium- and integrin-binding protein, CIB {Human	97.27
d1m45a_		146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	97.26
d1nyaa_		176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	97.25
d2h8pc1		57	Potassium channel protein {Streptomyces coelicolor	97.22
d1ggwa_		140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	97.2
d1a4pa_		92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	97.19
d2mysb_		145	Myosin Essential Chain {Chicken (Gallus gallus) [T	97.17
d1w7jb1		139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	97.11
d1wdcb_		142	Myosin Essential Chain {Bay scallop (Aequipecten i	97.1
d1y1xa_		182	Programmed cell death 6 protein-like protein {Leis	96.95
d2scpa_		174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	96.93
d1yuta1		98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	96.93
d1snla_		99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	96.89
d1cb1a_		78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	96.87
d1g8ia_		187	Frequenin (neuronal calcium sensor 1) {Human (Homo	96.84
d1bjfa_		181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	96.7
d1e8aa_		87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	96.7
d1exra_		146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	96.69
d1jfja_		134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	96.68
d1wdcc_		152	Myosin Regulatory Chain {Bay scallop (Aequipecten	96.68
d1jfja_		134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	96.61
d1k8ua_		89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	96.5
d1hqva_		181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	96.46
d2obha1		141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	96.46
d1fpwa_		190	Frequenin (neuronal calcium sensor 1) {Baker's yea	96.45
d1hqva_		181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	96.44
d1auib_		165	Calcineurin regulatory subunit (B-chain) {Human (H	96.4
d1y1xa_		182	Programmed cell death 6 protein-like protein {Leis	96.27
d1jbaa_		189	Guanylate cyclase activating protein 2, GCAP-2 {Co	96.23
d1wdcb_		142	Myosin Essential Chain {Bay scallop (Aequipecten i	96.13
d1s6ca_		178	Kchip1, Kv4 potassium channel-interacting protein	96.12
d2zfda1		183	Calcineurin B-like protein 2 {Thale cress (Arabido	96.11
d1xk4a1		87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	96.03
d1ij5a_		321	Cbp40 (plasmodial specific CaII-binding protein LA	96.01
d1omra_		201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	95.9
d1xk4c1		83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	95.88
d1s6ia_		182	Calcium-dependent protein kinase sk5 CLD {Soybean	95.82
d1p7ba2		116	Inward rectifier potassium channel Kirbac1.1 {Burk	95.78
d1ggwa_		140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	95.75
d3cr5x1		90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	95.7
d1topa_		162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	95.65
d1s6ia_		182	Calcium-dependent protein kinase sk5 CLD {Soybean	95.62
d1ctda_		34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	95.55
d1k94a_		165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	95.41
d1juoa_		172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	95.4
d2mysc_		145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	95.31
d1xl4a2		116	Inward rectifier potassium channel kirbac3.1 {Magn	95.28
d1psra_		100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	95.23
d1qlsa_		95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	95.0
d2scpa_		174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	94.94
d1fpwa_		190	Frequenin (neuronal calcium sensor 1) {Baker's yea	94.91
d2hf5a1		33	Troponin C {Human (Homo sapiens), cardiac isoform	94.83
d1alva_		173	Calpain small (regulatory) subunit (domain VI) {Pi	94.68
d1df0a1		186	Calpain large subunit, C-terminal domain (domain I	94.49
d1j55a_		94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	94.44
d1qxpa2		188	Calpain large subunit, C-terminal domain (domain I	94.43
d1auib_		165	Calcineurin regulatory subunit (B-chain) {Human (H	94.39
d1k94a_		165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	94.34
d1dtla_		156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	94.3
d2mysb_		145	Myosin Essential Chain {Chicken (Gallus gallus) [T	94.28
d1alva_		173	Calpain small (regulatory) subunit (domain VI) {Pi	94.17
d1nyaa_		176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	94.05
d1df0a1		186	Calpain large subunit, C-terminal domain (domain I	93.98
d1jbaa_		189	Guanylate cyclase activating protein 2, GCAP-2 {Co	93.75
d1m45a_		146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	93.72
d1omra_		201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	93.48
d1ij5a_		321	Cbp40 (plasmodial specific CaII-binding protein LA	93.41
d1lkja_		146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	93.33
d1w7jb1		139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	93.11
d1s6ca_		178	Kchip1, Kv4 potassium channel-interacting protein	93.05
d1juoa_		172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	92.56
d1xo5a_		180	Calcium- and integrin-binding protein, CIB {Human	92.29
d2zfda1		183	Calcineurin B-like protein 2 {Thale cress (Arabido	92.23
d1wdcc_		152	Myosin Regulatory Chain {Bay scallop (Aequipecten	92.07
d1g8ia_		187	Frequenin (neuronal calcium sensor 1) {Human (Homo	91.76
d1uhka1		187	Calcium-regulated photoprotein {Jellyfish (Aequore	91.45
d1bjfa_		181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	91.39
d2hf5a1		33	Troponin C {Human (Homo sapiens), cardiac isoform	91.25
d1qxpa2		188	Calpain large subunit, C-terminal domain (domain I	91.21
d2sasa_		185	Sarcoplasmic calcium-binding protein {Amphioxus (B	89.67
d5pala_		109	Parvalbumin {Leopard shark (Triakis semifasciata)	89.22
d1pvaa_		109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	88.77
d1fw4a_		65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	88.67
d1rwya_		109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	85.52
d2pvba_		107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	84.07
d1oqpa_		77	Caltractin (centrin 2) {Green algae (Chlamydomonas	84.03
d2fcea1		61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	83.78
d2zkmx1		170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	82.74
d1jc2a_		75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	82.25
d1fi5a_		81	Troponin C {Chicken (Gallus gallus), cardiac isofo	82.04
d2zkmx1		170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	80.79
d1qv0a_		189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	80.71

>d1orsc_ f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aeropyrum pernix [TaxId: 56636]}	Back information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel KVAP
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.00  E-value=3.8e-10  Score=96.96  Aligned_cols=89  Identities=17%  Similarity=0.120  Sum_probs=75.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccchhhccccccchhHHHHHHHHHHHHHHhhcCCcCCcchhhhHhHHHHHHHHhcccHh
Q 011091          137 VYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQ  216 (494)
Q Consensus       137 i~E~i~l~iF~~E~~lk~~~~g~~~y~~~~wN~~d~ivvv~~~id~i~~~~~~~~~~~~~~~lR~~R~lR~lrli~~~~~  216 (494)
                      .+|.+|+++|++|+++|+++.|.+ |....||++|++.++.+++........     ...+.+|.+|++|.+|+++..++
T Consensus        41 ~~e~v~~~iF~~E~~lrl~~~~~~-~~~~~~~~iDl~ai~p~~~~~~~~~~~-----~~lr~lR~~R~~R~lrl~~~~~~  114 (132)
T d1orsc_          41 LVDLILVIILWADYAYRAYKSGDP-AGYVKKTLYEIPALVPAGLLALIEGHL-----AGLGLFRLVRLLRFLRILLIISR  114 (132)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTST-TTTTTTCGGGTGGGSCHHHHHHHHHHH-----HHTTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcc-ceeCCcchHHHHHHHHHHHHHhhhhhH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999999999999988754 666789999999998887765544221     25678999999999999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 011091          217 LRDTLFVLAGMLGTY  231 (494)
Q Consensus       217 lr~l~~~l~~sl~~i  231 (494)
                      ++++++++.+|.+++
T Consensus       115 ~~~ll~ai~~s~~~l  129 (132)
T d1orsc_         115 GSKFLSAIADAADKL  129 (132)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999999876

PyMOL of d1orsc_

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}	Back information, alignment and structure

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}	Back information, alignment and structure

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}	Back information, alignment and structure

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}	Back information, alignment and structure

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}	Back information, alignment and structure

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}	Back information, alignment and structure

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1orsc_ f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aeropyrum pernix [TaxId: 56636]}	Back information, alignment and structure

>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}	Back information, alignment and structure

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}	Back information, alignment and structure

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}	Back information, alignment and structure

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	Back information, alignment and structure

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}	Back information, alignment and structure

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	Back information, alignment and structure

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	Back information, alignment and structure

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}	Back information, alignment and structure

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}	Back information, alignment and structure

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}	Back information, alignment and structure

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}	Back information, alignment and structure

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}	Back information, alignment and structure

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}	Back information, alignment and structure

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}	Back information, alignment and structure

>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}	Back information, alignment and structure

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}	Back information, alignment and structure

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}	Back information, alignment and structure

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}	Back information, alignment and structure

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}	Back information, alignment and structure

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}	Back information, alignment and structure

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}	Back information, alignment and structure

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	Back information, alignment and structure

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}	Back information, alignment and structure

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}	Back information, alignment and structure

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}	Back information, alignment and structure

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}	Back information, alignment and structure

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}	Back information, alignment and structure

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}	Back information, alignment and structure

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}	Back information, alignment and structure

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}	Back information, alignment and structure

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}	Back information, alignment and structure

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}	Back information, alignment and structure

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}	Back information, alignment and structure

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}	Back information, alignment and structure

>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]}	Back information, alignment and structure

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}	Back information, alignment and structure

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}	Back information, alignment and structure

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}	Back information, alignment and structure

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1xl4a2 f.14.1.1 (A:23-138) Inward rectifier potassium channel kirbac3.1 {Magnetospirillum magnetotacticum [TaxId: 188]}	Back information, alignment and structure

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}	Back information, alignment and structure

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}	Back information, alignment and structure

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}	Back information, alignment and structure

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}	Back information, alignment and structure

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}	Back information, alignment and structure

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}	Back information, alignment and structure

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}	Back information, alignment and structure

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}	Back information, alignment and structure

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}	Back information, alignment and structure

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}	Back information, alignment and structure

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}	Back information, alignment and structure

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}	Back information, alignment and structure

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}	Back information, alignment and structure

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}	Back information, alignment and structure

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}	Back information, alignment and structure

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}	Back information, alignment and structure

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}	Back information, alignment and structure

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}	Back information, alignment and structure

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	Back information, alignment and structure

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	Back information, alignment and structure

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	Back information, alignment and structure

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}	Back information, alignment and structure

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}	Back information, alignment and structure

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}	Back information, alignment and structure