Citrus Sinensis ID: 011367

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------
MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTESSDDDDSHDEL
ccccccHHHHHHHHcHHcccEEEEEccHHHHHHHHHcccccccccEEEEEEccccccEEEEEEEEccEEEEEEcccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccccccccEEEEEccccccccccccccccccccccccccccccEEEEccccccccEEEEEEEcccccccccccccccccccccccccccccEEEEEEEccccEEEEEEEEccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccHHHcccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccc
ccccHHHHHHHHHHHHHcccEEEEEEEHHHHHHHHcccccccccEEEEEEEEccccEEEEEEEEEccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHcccHHHcHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccEEEEEEEEHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHccEEEEEcHHHHcHHHHHHHHHHccccccEcccccccHHHHHHHHHHHHccccccHHHHHcccccEccccEEEEEcccEEEEEEccccEccEEEEEEEEEccccccEEEEEEEEccccEHHHcEEEEEEEEEcccccccccccEEEEEEEcccccEEEEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGldkkggeknILVFdlgggtfdvsILTIDNGVFEVLstngdthlggedfDQRVMEYFIKLIKKkhgkdiskdKRAIGKLRREAERAKRALSSQHQVRVEIESLfdgidfseplTRARFEELNNDLFRKTMGPVKKAMedagleknqIDEIVLvggstripKVQQLLKDyfdgkepnkgvnpdeAVAYGAAVqggilsgeggdetkdillldvapltlgietvggvmtkliprntviptkksqvfttyqdqqtTVSIQVFEGERSLTKDCRLLgkfdlsgippaprgtpqiEVTFEVDangilnvkaedkgtgksekititndkgrlsQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVyqrsggapgagtessddddshdel
MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNgdthlggedfDQRVMEYFIKLikkkhgkdiskdkraiGKLRREAERAkralssqhqvrvEIESlfdgidfsePLTRARFEELNNDLFRKTMGPVKKAMedagleknqIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGgvmtkliprntviptkksqvfttyqdqqttvsiqvfegerSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDangilnvkaedkgtgksekititndkgrlsqeeIDRMVREAeefaeedkkvkekidarnslETYVYnmknqindkdkladKLESDEKDKIETAVKEAlewlddnqsAEKEDYEEKLKEVEAVCNPIITAVyqrsggapgagtessddddshdel
MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFiklikkkhgkdiskdkRAIGklrreaerakralssQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTEssddddshdEL
***SLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKK********************************RVEIESLFDGIDFSEPLTRARFEELNNDLFRK*************LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDG**********EAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPA**GTPQIEVTFEVDANGILNV*******************************************************TYVY***************************************************EVEAVCNPIITAVYQ**********************
MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDK**GKS**ITITNDKGRLSQEEIDRMVREAEEFAE**K******DARNSLETYVYNMKN*******************IETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPI****************************
MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKL***************QVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREA***********EKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQ**********LKEVEAVCNPIITAVYQR*********************
*LLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRS********************
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MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDxxxxxxxxxxxxxxxxxxxxxLSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEExxxxxxxxxxxxxxxxxxxxxIDARNSLETYVYNxxxxxxxxxxxxxxxxxxxxxKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCNPIITAVYQRSGGAPGAGTESSDDDDSHDEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query487 2.2.26 [Sep-21-2011]
Q03685668 Luminal-binding protein 5 N/A no 0.985 0.718 0.950 0.0
Q03684667 Luminal-binding protein 4 N/A no 0.983 0.718 0.945 0.0
P49118666 Luminal-binding protein O N/A no 0.983 0.719 0.939 0.0
Q42434668 Luminal-binding protein O N/A no 0.985 0.718 0.912 0.0
Q39043668 Mediator of RNA polymeras yes no 0.985 0.718 0.910 0.0
Q9LKR3669 Mediator of RNA polymeras yes no 0.944 0.687 0.934 0.0
P24067663 Luminal-binding protein 2 N/A no 0.944 0.693 0.932 0.0
O24581663 Luminal-binding protein 3 N/A no 0.944 0.693 0.932 0.0
Q8H1B3675 Probable mediator of RNA no no 0.944 0.681 0.802 0.0
Q90593652 78 kDa glucose-regulated yes no 0.971 0.725 0.711 0.0
>sp|Q03685|BIP5_TOBAC Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1 Back     alignment and function desciption
 Score =  929 bits (2401), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/481 (95%), Positives = 473/481 (98%), Gaps = 1/481 (0%)

Query: 8   RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG 67
           RQATKDAG+IAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG
Sbjct: 188 RQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG 247

Query: 68  VFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALS 127
           VFEVL+TNGDTHLGGEDFDQR+MEYFIKLIKKKHGKDISKD RA+GKLRREAERAKRALS
Sbjct: 248 VFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALS 307

Query: 128 SQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIV 187
           SQHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIV
Sbjct: 308 SQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIV 367

Query: 188 LVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLD 247
           LVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLD
Sbjct: 368 LVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLD 427

Query: 248 VAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRL 307
           VAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTV+I VFEGERSLTKDCRL
Sbjct: 428 VAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVTISVFEGERSLTKDCRL 487

Query: 308 LGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEI 367
           LGKFDL+GI PAPRGTPQIEVTFEVDANGILNVKAEDK +GKSEKITITNDKGRLSQEEI
Sbjct: 488 LGKFDLTGIAPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNDKGRLSQEEI 547

Query: 368 DRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAV 427
           +RMV+EAEEFAEEDKKVKE+IDARNSLETYVYNM+NQINDKDKLADKLESDEK+KIETA 
Sbjct: 548 ERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETAT 607

Query: 428 KEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP-GAGTESSDDDDSHDE 486
           KEALEWLDDNQSAEKEDY+EKLKEVEAVCNPIITAVYQRSGGAP GA  ES++DDDSHDE
Sbjct: 608 KEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGAPGGASEESNEDDDSHDE 667

Query: 487 L 487
           L
Sbjct: 668 L 668
Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER.
Nicotiana tabacum (taxid: 4097)
>sp|Q03684|BIP4_TOBAC Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1 Back     alignment and function description
>sp|P49118|BIP_SOLLC Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1 Back     alignment and function description
>sp|Q42434|BIP_SPIOL Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1 Back     alignment and function description
>sp|Q39043|MD37F_ARATH Mediator of RNA polymerase II transcription subunit 37f OS=Arabidopsis thaliana GN=MED37F PE=1 SV=2 Back     alignment and function description
>sp|Q9LKR3|MD37A_ARATH Mediator of RNA polymerase II transcription subunit 37a OS=Arabidopsis thaliana GN=MED37A PE=1 SV=1 Back     alignment and function description
>sp|P24067|BIP2_MAIZE Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=1 SV=3 Back     alignment and function description
>sp|O24581|BIP3_MAIZE Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1 Back     alignment and function description
>sp|Q8H1B3|MD37B_ARATH Probable mediator of RNA polymerase II transcription subunit 37b OS=Arabidopsis thaliana GN=MED37B PE=1 SV=1 Back     alignment and function description
>sp|Q90593|GRP78_CHICK 78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query487
211906506 666 luminal binding protein [Gossypium hirsu 0.983 0.719 0.962 0.0
225426230 667 PREDICTED: luminal-binding protein 5 [Vi 0.985 0.719 0.960 0.0
255555659 664 heat shock protein, putative [Ricinus co 0.981 0.719 0.958 0.0
729623 668 RecName: Full=Luminal-binding protein 5; 0.985 0.718 0.950 0.0
6911549 665 heat shock protein 70 [Cucumis sativus] 0.981 0.718 0.954 0.0
449452228 665 PREDICTED: luminal-binding protein 5-lik 0.981 0.718 0.954 0.0
224072248 666 predicted protein [Populus trichocarpa] 0.985 0.720 0.941 0.0
729620 667 RecName: Full=Luminal-binding protein 4; 0.983 0.718 0.945 0.0
359490716 667 PREDICTED: luminal-binding protein 5-lik 0.985 0.719 0.939 0.0
217456978 667 ER luminal-binding protein [Nicotiana be 0.983 0.718 0.937 0.0
>gi|211906506|gb|ACJ11746.1| luminal binding protein [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  941 bits (2432), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/480 (96%), Positives = 476/480 (99%), Gaps = 1/480 (0%)

Query: 8   RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG 67
           RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG
Sbjct: 188 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG 247

Query: 68  VFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALS 127
           VFEVLSTNGDTHLGGEDFDQR+MEYFIKLIKKKHGKDISKD RA+GKLRREAERAKRALS
Sbjct: 248 VFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALS 307

Query: 128 SQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIV 187
           SQHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGL+K+QIDEIV
Sbjct: 308 SQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLQKSQIDEIV 367

Query: 188 LVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLD 247
           LVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLD
Sbjct: 368 LVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLD 427

Query: 248 VAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRL 307
           VAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRL
Sbjct: 428 VAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRL 487

Query: 308 LGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEI 367
           LGKFDL+GIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEI
Sbjct: 488 LGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEI 547

Query: 368 DRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAV 427
           +RMVREAEEFAEEDKKVKE+IDARNSLETY+YNMKNQINDKDKLADKLESDEK+K+ETAV
Sbjct: 548 ERMVREAEEFAEEDKKVKERIDARNSLETYIYNMKNQINDKDKLADKLESDEKEKVETAV 607

Query: 428 KEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTESSDDDDSHDEL 487
           KEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG G+ + +DDDSHDEL
Sbjct: 608 KEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGGGS-TEEDDDSHDEL 666

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225426230|ref|XP_002263323.1| PREDICTED: luminal-binding protein 5 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255555659|ref|XP_002518865.1| heat shock protein, putative [Ricinus communis] gi|223541852|gb|EEF43398.1| heat shock protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|729623|sp|Q03685.1|BIP5_TOBAC RecName: Full=Luminal-binding protein 5; Short=BiP 5; AltName: Full=78 kDa glucose-regulated protein homolog 5; Short=GRP-78-5; Flags: Precursor gi|19813|emb|CAA42660.1| luminal binding protein (BiP) [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|6911549|emb|CAB72128.1| heat shock protein 70 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449452228|ref|XP_004143862.1| PREDICTED: luminal-binding protein 5-like [Cucumis sativus] gi|449524930|ref|XP_004169474.1| PREDICTED: luminal-binding protein 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224072248|ref|XP_002303672.1| predicted protein [Populus trichocarpa] gi|222841104|gb|EEE78651.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|729620|sp|Q03684.1|BIP4_TOBAC RecName: Full=Luminal-binding protein 4; Short=BiP 4; AltName: Full=78 kDa glucose-regulated protein homolog 4; Short=GRP-78-4; Flags: Precursor gi|19811|emb|CAA42659.1| luminal binding protein (BiP) [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|359490716|ref|XP_002276268.2| PREDICTED: luminal-binding protein 5-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|217456978|gb|ACK55195.1| ER luminal-binding protein [Nicotiana benthamiana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query487
UNIPROTKB|B9RYP6664 RCOM_1312280 "Heat shock prote 0.960 0.704 0.901 8.5e-223
TAIR|locus:2182783669 BIP1 [Arabidopsis thaliana (ta 0.963 0.701 0.872 1.2e-216
TAIR|locus:2165715668 BIP2 [Arabidopsis thaliana (ta 0.963 0.702 0.865 3.2e-216
TAIR|locus:2035994675 BIP3 "binding protein 3" [Arab 0.948 0.684 0.751 1.5e-184
UNIPROTKB|Q90593652 HSPA5 "78 kDa glucose-regulate 0.956 0.714 0.671 1.2e-166
FB|FBgn0001218656 Hsc70-3 "Heat shock 70-kDa pro 0.948 0.704 0.665 1.6e-166
MGI|MGI:95835655 Hspa5 "heat shock protein 5" [ 0.956 0.711 0.669 2e-166
RGD|2843654 Hspa5 "heat shock protein 5" [ 0.956 0.712 0.667 6.8e-166
UNIPROTKB|G3I8R9654 I79_019946 "78 kDa glucose-reg 0.956 0.712 0.667 8.7e-166
UNIPROTKB|P07823654 HSPA5 "78 kDa glucose-regulate 0.956 0.712 0.667 8.7e-166
UNIPROTKB|B9RYP6 RCOM_1312280 "Heat shock protein, putative" [Ricinus communis (taxid:3988)] Back     alignment and assigned GO terms
 Score = 2151 (762.2 bits), Expect = 8.5e-223, P = 8.5e-223
 Identities = 422/468 (90%), Positives = 435/468 (92%)

Query:     8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG 67
             RQATKDAG+IAGLNVARIINEPTAAAIAYGLDK+GGEKNILVFDLGGGTFDVSILTIDNG
Sbjct:   187 RQATKDAGVIAGLNVARIINEPTAAAIAYGLDKRGGEKNILVFDLGGGTFDVSILTIDNG 246

Query:    68 VFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXX 127
             VFEVLSTNGDTHLGGEDFDQR+MEYF                RA+G              
Sbjct:   247 VFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALS 306

Query:   128 XQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIV 187
              QHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGL+KNQIDEIV
Sbjct:   307 SQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLQKNQIDEIV 366

Query:   188 LVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLD 247
             LVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLD
Sbjct:   367 LVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLD 426

Query:   248 VAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRL 307
             VAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRL
Sbjct:   427 VAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRL 486

Query:   308 LGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEI 367
             LGKFDL+ IPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEI
Sbjct:   487 LGKFDLTSIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEI 546

Query:   368 DRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAV 427
             +RMVREAEEFAEEDKKVKE+IDARNSLETY+YNMKNQI+DKDKLADKLESDEK+KIETAV
Sbjct:   547 ERMVREAEEFAEEDKKVKERIDARNSLETYIYNMKNQISDKDKLADKLESDEKEKIETAV 606

Query:   428 KEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGT 475
             KEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG G+
Sbjct:   607 KEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGGGS 654
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2182783 BIP1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165715 BIP2 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035994 BIP3 "binding protein 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q90593 HSPA5 "78 kDa glucose-regulated protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0001218 Hsc70-3 "Heat shock 70-kDa protein cognate 3" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:95835 Hspa5 "heat shock protein 5" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|2843 Hspa5 "heat shock protein 5" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G3I8R9 I79_019946 "78 kDa glucose-regulated protein" [Cricetulus griseus (taxid:10029)] Back     alignment and assigned GO terms
UNIPROTKB|P07823 HSPA5 "78 kDa glucose-regulated protein" [Mesocricetus auratus (taxid:10036)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q91883GRP78_XENLANo assigned EC number0.71760.94860.7021N/Ano
O24581BIP3_MAIZENo assigned EC number0.93260.94450.6938N/Ano
P29844HSP7C_DROMENo assigned EC number0.70830.97740.7256yesno
Q9LKR3MD37A_ARATHNo assigned EC number0.93470.94450.6875yesno
Q5R4P0GRP78_PONABNo assigned EC number0.70940.96910.7217yesno
Q16956GRP78_APLCANo assigned EC number0.73490.94860.6926N/Ano
P07823GRP78_MESAUNo assigned EC number0.70730.97120.7232N/Ano
Q03684BIP4_TOBACNo assigned EC number0.94580.98350.7181N/Ano
Q03685BIP5_TOBACNo assigned EC number0.95010.98560.7185N/Ano
Q8T869BIP2_DICDINo assigned EC number0.66800.97330.7203yesno
P24067BIP2_MAIZENo assigned EC number0.93260.94450.6938N/Ano
Q99170GRP78_YARLINo assigned EC number0.64940.98150.7134yesno
P83616GRP78_ASPNGNo assigned EC number0.65900.96910.7023yesno
Q42434BIP_SPIOLNo assigned EC number0.91260.98560.7185N/Ano
P49118BIP_SOLLCNo assigned EC number0.93950.98350.7192N/Ano
Q39043MD37F_ARATHNo assigned EC number0.91070.98560.7185yesno
A2Q0Z1HSP7C_HORSENo assigned EC number0.66440.93830.7074yesno
P27420HSP7C_CAEELNo assigned EC number0.71420.97120.7155yesno
Q3S4T7GRP78_SPETRNo assigned EC number0.70100.97120.7232N/Ano
P06761GRP78_RATNo assigned EC number0.71150.96910.7217yesno
P19208HSP7C_CAEBRNo assigned EC number0.72110.96910.7140N/Ano
Q0VCX2GRP78_BOVINNo assigned EC number0.70730.97120.7221yesno
P20029GRP78_MOUSENo assigned EC number0.71360.96910.7206yesno
P11021GRP78_HUMANNo assigned EC number0.70940.96910.7217yesno
Q90593GRP78_CHICKNo assigned EC number0.71150.97120.7254yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query487
PTZ00009653 PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro 0.0
pfam00012598 pfam00012, HSP70, Hsp70 protein 0.0
PRK00290627 PRK00290, dnaK, molecular chaperone DnaK; Provisio 0.0
TIGR02350595 TIGR02350, prok_dnaK, chaperone protein DnaK 0.0
COG0443579 COG0443, DnaK, Molecular chaperone [Posttranslatio 0.0
CHL00094621 CHL00094, dnaK, heat shock protein 70 0.0
PTZ00400663 PTZ00400, PTZ00400, DnaK-type molecular chaperone; 1e-178
PRK13411653 PRK13411, PRK13411, molecular chaperone DnaK; Prov 1e-177
cd10241374 cd10241, HSPA5-like_NBD, Nucleotide-binding domain 1e-168
PLN03184673 PLN03184, PLN03184, chloroplast Hsp70; Provisional 1e-165
PRK13410668 PRK13410, PRK13410, molecular chaperone DnaK; Prov 1e-165
PRK05183616 PRK05183, hscA, chaperone protein HscA; Provisiona 1e-153
TIGR01991599 TIGR01991, HscA, Fe-S protein assembly chaperone H 1e-148
PTZ00186657 PTZ00186, PTZ00186, heat shock 70 kDa precursor pr 1e-140
cd10233376 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding 1e-140
cd10234376 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding d 1e-112
cd10170369 cd10170, HSP70_NBD, Nucleotide-binding domain of t 1e-109
cd11733377 cd11733, HSPA9-like_NBD, Nucleotide-binding domain 1e-101
cd11734373 cd11734, Ssq1_like_NBD, Nucleotide-binding domain 1e-91
cd10235339 cd10235, HscC_like_NBD, Nucleotide-binding domain 4e-83
PRK01433595 PRK01433, hscA, chaperone protein HscA; Provisiona 4e-82
cd10236355 cd10236, HscA_like_NBD, Nucleotide-binding domain 3e-81
cd10237417 cd10237, HSPA13-like_NBD, Nucleotide-binding domai 1e-70
cd10238375 cd10238, HSPA14-like_NBD, Nucleotide-binding domai 2e-70
cd10230388 cd10230, HYOU1-like_NBD, Nucleotide-binding domain 2e-67
cd10228381 cd10228, HSPA4_like_NDB, Nucleotide-binding domain 1e-64
cd10232386 cd10232, ScSsz1p_like_NBD, Nucleotide-binding doma 8e-56
cd11732377 cd11732, HSP105-110_like_NBD, Nucleotide-binding d 4e-49
cd11737383 cd11737, HSPA4_NBD, Nucleotide-binding domain of H 3e-45
cd11739383 cd11739, HSPH1_NBD, Nucleotide-binding domain of H 6e-43
cd11738383 cd11738, HSPA4L_NBD, Nucleotide-binding domain of 2e-40
cd10231415 cd10231, YegD_like, Escherichia coli YegD, a putat 2e-24
cd10225320 cd10225, MreB_like, MreB and similar proteins 3e-12
cd10229404 cd10229, HSPA12_like_NBD, Nucleotide-binding domai 6e-09
pfam06723327 pfam06723, MreB_Mbl, MreB/Mbl protein 2e-07
PRK11678450 PRK11678, PRK11678, putative chaperone; Provisiona 3e-07
PRK13930335 PRK13930, PRK13930, rod shape-determining protein 8e-07
PRK13928336 PRK13928, PRK13928, rod shape-determining protein 9e-07
cd10227312 cd10227, ParM_like, Plasmid segregation protein Pa 9e-07
COG0849418 COG0849, ftsA, Cell division ATPase FtsA [Cell div 4e-06
TIGR00904333 TIGR00904, mreB, cell shape determining protein, M 7e-06
PRK13927334 PRK13927, PRK13927, rod shape-determining protein 1e-05
COG1077342 COG1077, MreB, Actin-like ATPase involved in cell 2e-05
COG4820277 COG4820, EutJ, Ethanolamine utilization protein, p 6e-04
TIGR01312481 TIGR01312, XylB, D-xylulose kinase 7e-04
TIGR02529239 TIGR02529, EutJ, ethanolamine utilization protein 9e-04
cd00012185 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide- 0.001
PRK15080267 PRK15080, PRK15080, ethanolamine utilization prote 0.001
cd07809487 cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 0.002
PRK13929335 PRK13929, PRK13929, rod-share determining protein 0.002
>gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional Back     alignment and domain information 
 Score =  728 bits (1880), Expect = 0.0
 Identities = 309/469 (65%), Positives = 382/469 (81%), Gaps = 3/469 (0%)

Query: 8   RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDN 66
           RQATKDAG IAGLNV RIINEPTAAAIAYGLDKKG GEKN+L+FDLGGGTFDVS+LTI++
Sbjct: 156 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKGDGEKNVLIFDLGGGTFDVSLLTIED 215

Query: 67  GVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH-GKDISKDKRAIGKLRREAERAKRA 125
           G+FEV +T GDTHLGGEDFD R++E+ ++  K+K+ GKD+S ++RA+ +LR + ERAKR 
Sbjct: 216 GIFEVKATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGKDLSSNQRALRRLRTQCERAKRT 275

Query: 126 LSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDE 185
           LSS  Q  +EI+SLF+GID++  ++RARFEEL  D FR T+ PV+K ++DAG++K  + E
Sbjct: 276 LSSSTQATIEIDSLFEGIDYNVTISRARFEELCGDYFRNTLQPVEKVLKDAGMDKRSVHE 335

Query: 186 IVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILL 245
           +VLVGGSTRIPKVQ L+KD+F+GKEP K +NPDEAVAYGAAVQ  IL+GE   + +D+LL
Sbjct: 336 VVLVGGSTRIPKVQSLIKDFFNGKEPCKSINPDEAVAYGAAVQAAILTGEQSSQVQDLLL 395

Query: 246 LDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 305
           LDV PL+LG+ET GGVMTKLI RNT IPTKKSQ+FTTY D Q  V IQVFEGER++TKD 
Sbjct: 396 LDVTPLSLGLETAGGVMTKLIERNTTIPTKKSQIFTTYADNQPGVLIQVFEGERAMTKDN 455

Query: 306 RLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQE 365
            LLGKF L GIPPAPRG PQIEVTF++DANGILNV AEDK TGKS KITITNDKGRLS+ 
Sbjct: 456 NLLGKFHLDGIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNKITITNDKGRLSKA 515

Query: 366 EIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIET 425
           +IDRMV EAE++  ED+  +E+++A+N LE Y Y+MKN + D +K+  KL   +K  IE 
Sbjct: 516 DIDRMVNEAEKYKAEDEANRERVEAKNGLENYCYSMKNTLQD-EKVKGKLSDSDKATIEK 574

Query: 426 AVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 474
           A+ EALEWL+ NQ AEKE++E K KEVE+VCNPI+T +YQ +GG    G
Sbjct: 575 AIDEALEWLEKNQLAEKEEFEHKQKEVESVCNPIMTKMYQAAGGGMPGG 623

Length = 653
>gnl|CDD|215656 pfam00012, HSP70, Hsp70 protein Back     alignment and domain information
>gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|233830 TIGR02350, prok_dnaK, chaperone protein DnaK Back     alignment and domain information
>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70 Back     alignment and domain information
>gnl|CDD|240403 PTZ00400, PTZ00400, DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>gnl|CDD|184039 PRK13411, PRK13411, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|212681 cd10241, HSPA5-like_NBD, Nucleotide-binding domain of human HSPA5 and similar proteins Back     alignment and domain information
>gnl|CDD|215618 PLN03184, PLN03184, chloroplast Hsp70; Provisional Back     alignment and domain information
>gnl|CDD|184038 PRK13410, PRK13410, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|235360 PRK05183, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|233673 TIGR01991, HscA, Fe-S protein assembly chaperone HscA Back     alignment and domain information
>gnl|CDD|140213 PTZ00186, PTZ00186, heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>gnl|CDD|212675 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins Back     alignment and domain information
>gnl|CDD|212676 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding domain of human HSPA9 and similar proteins Back     alignment and domain information
>gnl|CDD|212667 cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family Back     alignment and domain information
>gnl|CDD|212683 cd11733, HSPA9-like_NBD, Nucleotide-binding domain of human HSPA9, Escherichia coli DnaK, and similar proteins Back     alignment and domain information
>gnl|CDD|212684 cd11734, Ssq1_like_NBD, Nucleotide-binding domain of Saccharomyces cerevisiae Ssq1 and similar proteins Back     alignment and domain information
>gnl|CDD|212677 cd10235, HscC_like_NBD, Nucleotide-binding domain of Escherichia coli HscC and similar proteins Back     alignment and domain information
>gnl|CDD|234955 PRK01433, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|212678 cd10236, HscA_like_NBD, Nucleotide-binding domain of HscA and similar proteins Back     alignment and domain information
>gnl|CDD|212679 cd10237, HSPA13-like_NBD, Nucleotide-binding domain of human HSPA13 and similar proteins Back     alignment and domain information
>gnl|CDD|212680 cd10238, HSPA14-like_NBD, Nucleotide-binding domain of human HSPA14 and similar proteins Back     alignment and domain information
>gnl|CDD|212672 cd10230, HYOU1-like_NBD, Nucleotide-binding domain of human HYOU1 and similar proteins Back     alignment and domain information
>gnl|CDD|212670 cd10228, HSPA4_like_NDB, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins Back     alignment and domain information
>gnl|CDD|212674 cd10232, ScSsz1p_like_NBD, Nucleotide-binding domain of Saccharmomyces cerevisiae Ssz1pp and similar proteins Back     alignment and domain information
>gnl|CDD|212682 cd11732, HSP105-110_like_NBD, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4, HYOU1, and similar proteins Back     alignment and domain information
>gnl|CDD|212687 cd11737, HSPA4_NBD, Nucleotide-binding domain of HSPA4 Back     alignment and domain information
>gnl|CDD|212689 cd11739, HSPH1_NBD, Nucleotide-binding domain of HSPH1 Back     alignment and domain information
>gnl|CDD|212688 cd11738, HSPA4L_NBD, Nucleotide-binding domain of HSPA4L Back     alignment and domain information
>gnl|CDD|212673 cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins Back     alignment and domain information
>gnl|CDD|212668 cd10225, MreB_like, MreB and similar proteins Back     alignment and domain information
>gnl|CDD|212671 cd10229, HSPA12_like_NBD, Nucleotide-binding domain of HSPA12A, HSPA12B and similar proteins Back     alignment and domain information
>gnl|CDD|115385 pfam06723, MreB_Mbl, MreB/Mbl protein Back     alignment and domain information
>gnl|CDD|236954 PRK11678, PRK11678, putative chaperone; Provisional Back     alignment and domain information
>gnl|CDD|237564 PRK13930, PRK13930, rod shape-determining protein MreB; Provisional Back     alignment and domain information
>gnl|CDD|237563 PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>gnl|CDD|212669 cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins Back     alignment and domain information
>gnl|CDD|223918 COG0849, ftsA, Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|129982 TIGR00904, mreB, cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>gnl|CDD|237562 PRK13927, PRK13927, rod shape-determining protein MreB; Provisional Back     alignment and domain information
>gnl|CDD|224003 COG1077, MreB, Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|227157 COG4820, EutJ, Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|233354 TIGR01312, XylB, D-xylulose kinase Back     alignment and domain information
>gnl|CDD|213718 TIGR02529, EutJ, ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily Back     alignment and domain information
>gnl|CDD|237904 PRK15080, PRK15080, ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>gnl|CDD|198375 cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|184403 PRK13929, PRK13929, rod-share determining protein MreBH; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 487
KOG0100663 consensus Molecular chaperones GRP78/BiP/KAR2, HSP 100.0
PTZ00009653 heat shock 70 kDa protein; Provisional 100.0
PRK13411653 molecular chaperone DnaK; Provisional 100.0
KOG0101620 consensus Molecular chaperones HSP70/HSC70, HSP70 100.0
PTZ00186657 heat shock 70 kDa precursor protein; Provisional 100.0
PLN03184673 chloroplast Hsp70; Provisional 100.0
PRK13410668 molecular chaperone DnaK; Provisional 100.0
PTZ00400663 DnaK-type molecular chaperone; Provisional 100.0
PRK00290627 dnaK molecular chaperone DnaK; Provisional 100.0
CHL00094621 dnaK heat shock protein 70 100.0
TIGR02350595 prok_dnaK chaperone protein DnaK. Members of this 100.0
TIGR01991599 HscA Fe-S protein assembly chaperone HscA. The Hea 100.0
PRK05183616 hscA chaperone protein HscA; Provisional 100.0
KOG0102640 consensus Molecular chaperones mortalin/PBP74/GRP7 100.0
PRK01433595 hscA chaperone protein HscA; Provisional 100.0
PF00012602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 100.0
COG0443579 DnaK Molecular chaperone [Posttranslational modifi 100.0
KOG0103727 consensus Molecular chaperones HSP105/HSP110/SSE1, 100.0
KOG0104 902 consensus Molecular chaperones GRP170/SIL1, HSP70 100.0
PRK11678450 putative chaperone; Provisional 100.0
PRK13928336 rod shape-determining protein Mbl; Provisional 99.98
PRK13927334 rod shape-determining protein MreB; Provisional 99.96
PRK13929335 rod-share determining protein MreBH; Provisional 99.96
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 99.96
PRK13930335 rod shape-determining protein MreB; Provisional 99.95
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 99.94
PRK15080267 ethanolamine utilization protein EutJ; Provisional 99.91
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 99.91
TIGR01174371 ftsA cell division protein FtsA. This bacterial ce 99.88
COG1077342 MreB Actin-like ATPase involved in cell morphogene 99.87
PRK09472420 ftsA cell division protein FtsA; Reviewed 99.86
COG0849418 ftsA Cell division ATPase FtsA [Cell division and 99.72
COG4820277 EutJ Ethanolamine utilization protein, possible ch 99.37
PRK13917344 plasmid segregation protein ParM; Provisional 99.33
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 99.24
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 99.2
PF11104340 PilM_2: Type IV pilus assembly protein PilM;; PDB: 99.11
TIGR03739320 PRTRC_D PRTRC system protein D. A novel genetic sy 99.09
smart00268373 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki 99.06
PF06406318 StbA: StbA protein; InterPro: IPR009440 This entry 98.92
PTZ00280414 Actin-related protein 3; Provisional 98.81
COG4972354 PilM Tfp pilus assembly protein, ATPase PilM [Cell 98.64
PF00022393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 98.62
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 98.61
PTZ00281376 actin; Provisional 98.47
PTZ00004378 actin-2; Provisional 98.43
PTZ00452375 actin; Provisional 98.42
PTZ00466380 actin-like protein; Provisional 98.32
PF08841332 DDR: Diol dehydratase reactivase ATPase-like domai 98.28
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 97.87
PF075201002 SrfB: Virulence factor SrfB; InterPro: IPR009216 T 97.87
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 97.85
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 97.83
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 97.82
PRK10719475 eutA reactivating factor for ethanolamine ammonia 97.77
TIGR02259432 benz_CoA_red_A benzoyl-CoA reductase, bcr type, su 97.74
KOG0679426 consensus Actin-related protein - Arp4p/Act3p [Cyt 97.54
COG5277444 Actin and related proteins [Cytoskeleton] 97.43
PRK13317277 pantothenate kinase; Provisional 97.4
PF02782198 FGGY_C: FGGY family of carbohydrate kinases, C-ter 96.84
COG44571014 SrfB Uncharacterized protein conserved in bacteria 96.5
PF01968290 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPr 96.39
TIGR01315541 5C_CHO_kinase FGGY-family pentulose kinase. This m 96.25
PRK15027484 xylulokinase; Provisional 96.23
PLN02669556 xylulokinase 96.15
COG1069544 AraB Ribulose kinase [Energy production and conver 96.12
PF14450120 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B 96.02
KOG0676372 consensus Actin and related proteins [Cytoskeleton 95.76
PRK00047498 glpK glycerol kinase; Provisional 95.63
PTZ00294504 glycerol kinase-like protein; Provisional 95.56
TIGR00555279 panK_eukar pantothenate kinase, eukaryotic/staphyl 95.52
TIGR01312481 XylB D-xylulose kinase. D-xylulose kinase (XylB) g 95.5
TIGR02628465 fuculo_kin_coli L-fuculokinase. Members of this fa 95.41
PRK04123548 ribulokinase; Provisional 95.41
TIGR01311493 glycerol_kin glycerol kinase. This model describes 95.4
TIGR01234536 L-ribulokinase L-ribulokinase. This enzyme catalyz 95.39
PRK10331470 L-fuculokinase; Provisional 95.32
TIGR01314505 gntK_FGGY gluconate kinase, FGGY type. Gluconate i 95.08
PLN02295512 glycerol kinase 95.0
TIGR02627454 rhamnulo_kin rhamnulokinase. This model describes 94.98
KOG2517516 consensus Ribulose kinase and related carbohydrate 94.93
PRK10939520 autoinducer-2 (AI-2) kinase; Provisional 94.79
PRK10640471 rhaB rhamnulokinase; Provisional 94.59
KOG0681645 consensus Actin-related protein - Arp5p [Cytoskele 94.04
KOG0680400 consensus Actin-related protein - Arp6p [Cytoskele 93.95
COG1070502 XylB Sugar (pentulose and hexulose) kinases [Carbo 93.42
KOG2531545 consensus Sugar (pentulose and hexulose) kinases [ 93.21
KOG0797618 consensus Actin-related protein [Cytoskeleton] 92.59
PF01869271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 92.36
PRK03011358 butyrate kinase; Provisional 91.85
PRK11031496 guanosine pentaphosphate phosphohydrolase; Provisi 91.6
COG0248492 GppA Exopolyphosphatase [Nucleotide transport and 91.6
PF02541285 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I 91.33
KOG0677389 consensus Actin-related protein Arp2/3 complex, su 90.78
PF07318343 DUF1464: Protein of unknown function (DUF1464); In 90.11
PLN02666 1275 5-oxoprolinase 90.03
PRK09585365 anmK anhydro-N-acetylmuramic acid kinase; Reviewed 89.9
PRK10854513 exopolyphosphatase; Provisional 89.53
PF02543360 CmcH_NodU: Carbamoyltransferase; InterPro: IPR0036 88.15
PF03702364 UPF0075: Uncharacterised protein family (UPF0075); 87.5
COG0145674 HyuA N-methylhydantoinase A/acetone carboxylase, b 86.55
COG3426358 Butyrate kinase [Energy production and conversion] 86.22
PTZ00340345 O-sialoglycoprotein endopeptidase-like protein; Pr 85.95
TIGR03706300 exo_poly_only exopolyphosphatase. It appears that 84.72
PLN02920398 pantothenate kinase 1 83.68
PRK00976326 hypothetical protein; Provisional 83.1
TIGR03281326 methan_mark_12 putative methanogenesis marker prot 83.1
COG2377371 Predicted molecular chaperone distantly related to 81.92
COG0554499 GlpK Glycerol kinase [Energy production and conver 81.82
PRK14878323 UGMP family protein; Provisional 81.14
KOG2708336 consensus Predicted metalloprotease with chaperone 80.8
>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=5.3e-110  Score=784.49  Aligned_cols=483  Identities=77%  Similarity=1.148  Sum_probs=470.9

Q ss_pred             CCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCc
Q 011367            1 MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHL   80 (487)
Q Consensus         1 ~~f~~~qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~l   80 (487)
                      +|||++||+|+++|..+|||+++++|+||+|||++|+++.....+++||||+||||||+|++.+++|+|+|+++.||.+|
T Consensus       181 AYFNDAQrQATKDAGtIAgLnV~RIiNePTaAAIAYGLDKk~gEknilVfDLGGGTFDVSlLtIdnGVFeVlaTnGDThL  260 (663)
T KOG0100|consen  181 AYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKKDGEKNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHL  260 (663)
T ss_pred             hhcchHHHhhhcccceeccceEEEeecCccHHHHHhcccccCCcceEEEEEcCCceEEEEEEEEcCceEEEEecCCCccc
Confidence            59999999999999999999999999999999999999998888999999999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCCceeEEEecHHHHHHHHHH
Q 011367           81 GGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNND  160 (487)
Q Consensus        81 GG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~~~~~  160 (487)
                      ||.|||+++++|+...++++++.+++.+.+++.+|+++||+||+.||+..++.+.|+++++|.||+-++||..||++..+
T Consensus       261 GGEDFD~rvm~~fiklykkK~gkDv~kdnkA~~KLrRe~EkAKRaLSsqhq~riEIeS~fdG~DfSEtLtRAkFEElNmD  340 (663)
T KOG0100|consen  261 GGEDFDQRVMEYFIKLYKKKHGKDVRKDNKAVQKLRREVEKAKRALSSQHQVRIEIESLFDGVDFSETLTRAKFEELNMD  340 (663)
T ss_pred             CccchHHHHHHHHHHHHhhhcCCccchhhHHHHHHHHHHHHHHhhhccccceEEeeeeccccccccchhhhhHHHHhhhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhccCCCCCCc
Q 011367          161 LFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDET  240 (487)
Q Consensus       161 ~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s~~~~~~~  240 (487)
                      ++...+.++..+|+.+++.+.+|+.|+||||++|||.||++|+++|+|++++..+||++|||+|||.+|..+|+.  ...
T Consensus       341 LFr~TlkPv~kvl~Ds~lkKsdideiVLVGGsTrIPKvQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsGe--e~t  418 (663)
T KOG0100|consen  341 LFRKTLKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSGE--EDT  418 (663)
T ss_pred             HHHHhhHHHHHHHhhcCcccccCceEEEecCcccChhHHHHHHHHhCCCCccCCCChHHHHHhhhhhhhcccccc--cCc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999998  458


Q ss_pred             cceEEEeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEEecCCCCCC
Q 011367          241 KDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAP  320 (487)
Q Consensus       241 ~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~  320 (487)
                      .++++.|++|+++||++.+|.|..+||||+.||+.++..|+++.|+|+.+.|++|+|++.+..+|+.||+|.|.||||+|
T Consensus       419 ~divLLDv~pLtlGIETvGGVMTklI~RNTviPTkKSQvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAP  498 (663)
T KOG0100|consen  419 GDIVLLDVNPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAP  498 (663)
T ss_pred             CcEEEEeeccccceeeeecceeeccccCCcccCccccceeeecccCCceEEEEEeeccccccccccccccccccCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCeEEEEEEEeCCccEEEEEEecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhhhHHHHHHH
Q 011367          321 RGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYN  400 (487)
Q Consensus       321 ~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~  400 (487)
                      +|.|+|+|+|.+|.||+|+|++.++.+|++.+|+|+++.++||+|+|++|++++++|.++|+..+++.++||+||+|.|.
T Consensus       499 RGvpqIEVtFevDangiL~VsAeDKgtg~~~kitItNd~~rLt~EdIerMv~eAekFAeeDk~~KekieaRN~LE~Yays  578 (663)
T KOG0100|consen  499 RGVPQIEVTFEVDANGILQVSAEDKGTGKKEKITITNDKGRLTPEDIERMVNEAEKFAEEDKKLKEKIEARNELESYAYS  578 (663)
T ss_pred             CCCccEEEEEEEccCceEEEEeeccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhhhhccCChHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 011367          401 MKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTESSDD  480 (487)
Q Consensus       401 ~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~a~~e~~~~kl~eL~~~~~pi~~r~~~~~~~~~~~~~~~~~~  480 (487)
                      +++.+.+.+++...+++++++.+..++++..+||++|++++.++|.+|.++|..++.||..+.++.+||+|...  +++|
T Consensus       579 lKnqi~dkekLg~Kl~~edKe~~e~av~e~~eWL~~n~~a~~Ee~~ek~kele~vv~PiisklY~~ag~~~~~~--~~ed  656 (663)
T KOG0100|consen  579 LKNQIGDKEKLGGKLSDEDKETIEDAVEEALEWLESNQDASKEEFKEKKKELEAVVQPIISKLYGGAGGAPEPA--GEED  656 (663)
T ss_pred             hhhccCchhHhcccCChhHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCC--CCcc
Confidence            99999998889999999999999999999999999999999999999999999999999999999888776544  4566


Q ss_pred             CCCCCCC
Q 011367          481 DDSHDEL  487 (487)
Q Consensus       481 ~~~~~~~  487 (487)
                      .+.||||
T Consensus       657 ~~e~del  663 (663)
T KOG0100|consen  657 TDEKDEL  663 (663)
T ss_pred             chhhccC
Confidence            7788886

>PTZ00009 heat shock 70 kDa protein; Provisional Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PTZ00400 DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>TIGR01991 HscA Fe-S protein assembly chaperone HscA Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK01433 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11678 putative chaperone; Provisional Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13917 plasmid segregation protein ParM; Provisional Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A Back     alignment and domain information
>TIGR03739 PRTRC_D PRTRC system protein D Back     alignment and domain information
>smart00268 ACTIN Actin Back     alignment and domain information
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA [] Back     alignment and domain information
>PTZ00280 Actin-related protein 3; Provisional Back     alignment and domain information
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>PTZ00281 actin; Provisional Back     alignment and domain information
>PTZ00004 actin-2; Provisional Back     alignment and domain information
>PTZ00452 actin; Provisional Back     alignment and domain information
>PTZ00466 actin-like protein; Provisional Back     alignment and domain information
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ] Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional Back     alignment and domain information
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A Back     alignment and domain information
>KOG0679 consensus Actin-related protein - Arp4p/Act3p [Cytoskeleton] Back     alignment and domain information
>COG5277 Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown] Back     alignment and domain information
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3 Back     alignment and domain information
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase Back     alignment and domain information
>PRK15027 xylulokinase; Provisional Back     alignment and domain information
>PLN02669 xylulokinase Back     alignment and domain information
>COG1069 AraB Ribulose kinase [Energy production and conversion] Back     alignment and domain information
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T Back     alignment and domain information
>KOG0676 consensus Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>PRK00047 glpK glycerol kinase; Provisional Back     alignment and domain information
>PTZ00294 glycerol kinase-like protein; Provisional Back     alignment and domain information
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>TIGR01312 XylB D-xylulose kinase Back     alignment and domain information
>TIGR02628 fuculo_kin_coli L-fuculokinase Back     alignment and domain information
>PRK04123 ribulokinase; Provisional Back     alignment and domain information
>TIGR01311 glycerol_kin glycerol kinase Back     alignment and domain information
>TIGR01234 L-ribulokinase L-ribulokinase Back     alignment and domain information
>PRK10331 L-fuculokinase; Provisional Back     alignment and domain information
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type Back     alignment and domain information
>PLN02295 glycerol kinase Back     alignment and domain information
>TIGR02627 rhamnulo_kin rhamnulokinase Back     alignment and domain information
>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional Back     alignment and domain information
>PRK10640 rhaB rhamnulokinase; Provisional Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>KOG0680 consensus Actin-related protein - Arp6p [Cytoskeleton] Back     alignment and domain information
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0797 consensus Actin-related protein [Cytoskeleton] Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>PRK03011 butyrate kinase; Provisional Back     alignment and domain information
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional Back     alignment and domain information
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 Back     alignment and domain information
>KOG0677 consensus Actin-related protein Arp2/3 complex, subunit Arp2 [Cytoskeleton] Back     alignment and domain information
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length Back     alignment and domain information
>PLN02666 5-oxoprolinase Back     alignment and domain information
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed Back     alignment and domain information
>PRK10854 exopolyphosphatase; Provisional Back     alignment and domain information
>PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors [] Back     alignment and domain information
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P Back     alignment and domain information
>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG3426 Butyrate kinase [Energy production and conversion] Back     alignment and domain information
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional Back     alignment and domain information
>TIGR03706 exo_poly_only exopolyphosphatase Back     alignment and domain information
>PLN02920 pantothenate kinase 1 Back     alignment and domain information
>PRK00976 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12 Back     alignment and domain information
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0554 GlpK Glycerol kinase [Energy production and conversion] Back     alignment and domain information
>PRK14878 UGMP family protein; Provisional Back     alignment and domain information
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query487
3c7n_B554 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 1e-149
1yuw_A554 Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214 1e-148
2v7z_A543 Crystal Structure Of The 70-Kda Heat Shock Cognate 1e-143
2v7y_A509 Crystal Structure Of The Molecular Chaperone Dnak F 1e-112
2kho_A605 Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAP 1e-110
4b9q_A605 Open Conformation Of Atp-Bound Hsp70 Homolog Dnak L 1e-107
3iuc_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 2e-88
3ldl_A384 Crystal Structure Of Human Grp78 (70kda Heat Shock 2e-88
2qw9_B394 Crystal Structure Of Bovine Hsc70 (1-394aa)in The A 6e-81
2qwn_A394 Crystal Structure Of Disulfide-Bond-Crosslinked Com 6e-80
1ba1_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 1e-78
1ngg_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 2e-78
1hpm_A386 How Potassium Affects The Activity Of The Molecular 2e-78
1bup_A386 T13s Mutant Of Bovine 70 Kilodalton Heat Shock Prot 2e-78
1ngh_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 2e-78
1ngb_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 3e-78
1nga_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 5e-78
1ngd_A386 Structural Basis Of The 70-kilodalton Heat Shock Co 5e-78
1ngf_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 5e-78
1atr_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 5e-78
1ngc_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 7e-78
1nge_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 7e-78
1kax_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71m 8e-78
1kaz_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71e 9e-78
1ba0_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 9e-78
1kay_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71a 9e-78
1hx1_A400 Crystal Structure Of A Bag Domain In Complex With T 9e-78
1ats_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 1e-77
2bup_A381 T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 1e-77
3fzf_A381 Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP 1e-77
3cqx_A386 Chaperone Complex Length = 386 1e-77
2e8a_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 1e-76
2e88_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 1e-76
1qqn_A378 D206s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-76
3jxu_A409 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-76
3a8y_A392 Crystal Structure Of The Complex Between The Bag5 B 2e-76
3i33_A404 Crystal Structure Of The Human 70kda Heat Shock Pro 2e-76
3d2e_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70, 2e-76
1qqm_A378 D199s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 2e-76
1qqo_A378 E175s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 2e-76
3qfp_A390 Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE D 2e-76
3qfu_A394 Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXE 2e-76
3d2f_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 2e-76
1s3x_A382 The Crystal Structure Of The Human Hsp70 Atpase Dom 2e-76
1hjo_A380 Atpase Domain Of Human Heat Shock 70kda Protein 1 L 3e-76
4fsv_A387 Crystal Structure Of A Heat Shock 70kda Protein 2 ( 4e-76
3fe1_A403 Crystal Structure Of The Human 70kda Heat Shock Pro 5e-76
3gdq_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 3e-75
3kvg_A400 Crystal Structure Of The N-Terminal Domain Of Hsp70 3e-73
3gl1_A387 Crystal Structure Of Atpase Domain Of Ssb1 Chaperon 1e-68
1ckr_A159 High Resolution Solution Structure Of The Heat Shoc 2e-59
3h0x_A152 Crystal Structure Of Peptide-Binding Domain Of Kar2 3e-58
1xqs_C191 Crystal Structure Of The Hspbp1 Core Domain Complex 2e-56
3dob_A152 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 1e-55
2op6_A152 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 2e-54
1dkg_D383 Crystal Structure Of The Nucleotide Exchange Factor 2e-51
1dky_A219 The Substrate Binding Domain Of Dnak In Complex Wit 6e-51
3dpo_A219 Crystal Structure Of The Substrate Binding Domain O 2e-50
1dkx_A219 The Substrate Binding Domain Of Dnak In Complex Wit 2e-50
1bpr_A191 Nmr Structure Of The Substrate Binding Domain Of Dn 1e-48
3n8e_A182 Substrate Binding Domain Of The Human Heat Shock 70 1e-47
3dqg_A151 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 2e-46
1q5l_A135 Nmr Structure Of The Substrate Binding Domain Of Dn 3e-36
1dg4_A115 Nmr Structure Of The Substrate Binding Domain Of Dn 8e-36
1u00_A227 Hsca Substrate Binding Domain Complexed With The Is 2e-35
3d2f_A675 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 1e-34
3d2e_A675 Crystal Structure Of A Complex Of Sse1p And Hsp70, 8e-34
3c7n_A668 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 3e-28
2qxl_A658 Crystal Structure Analysis Of Sse1, A Yeast Hsp110 3e-28
4gni_A409 Structure Of The Ssz1 Atpase Bound To Atp And Magne 1e-17
2p32_A120 Crystal Structure Of The C-Terminal 10 Kda Subdomai 3e-13
1ud0_A113 Crystal Structure Of The C-Terminal 10-Kda Subdomai 2e-12
3lof_A113 C-Terminal Domain Of Human Heat Shock 70kda Protein 6e-12
2lmg_A75 Solution Structure Of The C-Terminal Domain (537-61 3e-11
1jcf_A344 Mreb From Thermotoga Maritima, Trigonal Length = 34 8e-05
1jce_A344 Mreb From Thermotoga Maritima Length = 344 4e-04
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 554 Back     alignment and structure 
Iteration: 1

 Score =  524 bits (1350), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 256/399 (64%), Positives = 312/399 (78%), Gaps = 1/399 (0%)
Query: 8   RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
           RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67  GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
           G+FEV ST GDTHLGGEDFD R++ +F                RA+              
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
               Q  +EI+SL++GIDF   +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLL 246
           VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ  ILSG+  +  +D+LLL
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
Query: 247 DVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCR 306
           DV PL+LGIET GGVMT LI RNT IPTK++Q FTTY D Q  V IQV+EGER++TKD  
Sbjct: 395 DVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNN 454
Query: 307 LLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEE 366
           LLGKF+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+E+
Sbjct: 455 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKED 514
Query: 367 IDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQI 405
           I+RMV+EAE++  ED+K ++K+ ++NSLE+Y +NMK  +
Sbjct: 515 IERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT Length = 554 Back     alignment and structure
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein From Rattus Norvegicus In Post-Atp Hydrolysis State Length = 543 Back     alignment and structure
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis State Length = 509 Back     alignment and structure
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE (1-605) Complexed With Adp And Substrate Length = 605 Back     alignment and structure
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak Length = 605 Back     alignment and structure
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP Length = 408 Back     alignment and structure
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5 BIP) Atpase Domain In Complex With Atp Length = 384 Back     alignment and structure
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 394 Back     alignment and structure
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal Mutant With Cys 17 Replaced By Lys Length = 386 Back     alignment and structure
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular Chaperone Hsc70. Ii. Potassium Binds Specifically In The Atpase Active Site Length = 386 Back     alignment and structure
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 386 Back     alignment and structure
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant Length = 381 Back     alignment and structure
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant Length = 381 Back     alignment and structure
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge 3 Length = 386 Back     alignment and structure
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant Length = 381 Back     alignment and structure
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The Hsc70 Atpase Domain Length = 400 Back     alignment and structure
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 Length = 381 Back     alignment and structure
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP Length = 381 Back     alignment and structure
>pdb|3CQX|A Chain A, Chaperone Complex Length = 386 Back     alignment and structure
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In Complex With Amp-Pnp Length = 391 Back     alignment and structure
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The Apo Form Length = 391 Back     alignment and structure
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a (Hsp70-1) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 409 Back     alignment and structure
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And Hsp70 Nbd Length = 392 Back     alignment and structure
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2 (Hsp70-2) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 404 Back     alignment and structure
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 382 Back     alignment and structure
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN Length = 390 Back     alignment and structure
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 382 Back     alignment and structure
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain Length = 382 Back     alignment and structure
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1 Length = 380 Back     alignment and structure
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2) From Homo Sapiens At 1.80 A Resolution Length = 387 Back     alignment and structure
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6 (Hsp70b') Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 403 Back     alignment and structure
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1-Like Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 408 Back     alignment and structure
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 (Cgd2_20) From Cryptosporidium Parvum In Complex With Amppnp Length = 400 Back     alignment and structure
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A Member Of The Hsp70 Family, From Saccharomyces Cerevisiae Length = 387 Back     alignment and structure
>pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock Cognate-70 Kd Substrate Binding Domain Obtained By Multidimensional Nmr Techniques Length = 159 Back     alignment and structure
>pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2 Protein From Saccharomyces Cerevisiae Length = 152 Back     alignment and structure
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With The Fragment Of Hsp70 Atpase Domain Length = 191 Back     alignment and structure
>pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F44e5.5 From C.Elegans. Length = 152 Back     alignment and structure
>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D Precursor From C.Elegans Length = 152 Back     alignment and structure
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 383 Back     alignment and structure
>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 2 Native Crystals Length = 219 Back     alignment and structure
>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E. Coli Dnak In Complex With A Short Pyrrhocoricin-Derived Inhibitor Peptide Length = 219 Back     alignment and structure
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 1 Selenomethionyl Crystals Length = 219 Back     alignment and structure
>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, Minimized Average Structure Length = 191 Back     alignment and structure
>pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda Prote (Mortalin) Length = 182 Back     alignment and structure
>pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F, Mitochondrial Precursor, From Caenorhabditis Elegans. Length = 151 Back     alignment and structure
>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak Bound To The Peptide Nrllltg Length = 135 Back     alignment and structure
>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In The Apo Form Length = 115 Back     alignment and structure
>pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu Recognition Peptide Elppvkihc Length = 227 Back     alignment and structure
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 675 Back     alignment and structure
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 675 Back     alignment and structure
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 668 Back     alignment and structure
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110 Length = 658 Back     alignment and structure
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium Length = 409 Back     alignment and structure
>pdb|2P32|A Chain A, Crystal Structure Of The C-Terminal 10 Kda Subdomain From C. Elegans Hsp70 Length = 120 Back     alignment and structure
>pdb|1UD0|A Chain A, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of Hsc70 Length = 113 Back     alignment and structure
>pdb|3LOF|A Chain A, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b. Length = 113 Back     alignment and structure
>pdb|2LMG|A Chain A, Solution Structure Of The C-Terminal Domain (537-610) Of Human Heat Shock Protein 70 Length = 75 Back     alignment and structure
>pdb|1JCF|A Chain A, Mreb From Thermotoga Maritima, Trigonal Length = 344 Back     alignment and structure
>pdb|1JCE|A Chain A, Mreb From Thermotoga Maritima Length = 344 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query487
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 0.0
3d2f_A675 Heat shock protein homolog SSE1; nucleotide exchan 0.0
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 0.0
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 0.0
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 1e-175
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 1e-171
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 1e-118
3dob_A152 Heat shock 70 kDa protein F44E5.5; structural geno 1e-107
3h0x_A152 78 kDa glucose-regulated protein homolog; structur 1e-107
2op6_A152 Heat shock 70 kDa protein D; HSP70/peptide-binding 1e-106
4e81_A219 Chaperone protein DNAK; chaperone; 1.90A {Escheric 1e-96
1u00_A227 HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A 1e-93
3n8e_A182 Stress-70 protein, mitochondrial; beta-sandwich, h 3e-93
3dqg_A151 Heat shock 70 kDa protein F; structural genomics, 2e-81
1q5l_A135 Chaperone protein DNAK; HSP70, chaperone, heat sho 4e-71
2p32_A120 Heat shock 70 kDa protein A; three-helix bundle, c 6e-35
3lof_A113 Heat shock 70 kDa protein 1; structural genomics, 6e-32
1ud0_A113 HSC70, 70 kDa heat-shock-like protein; chaperone; 1e-29
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 8e-29
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 5e-24
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 4e-14
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 1e-13
3js6_A355 Uncharacterized PARM protein; partition, segregati 5e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 4e-08
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 8e-07
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 5e-06
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 4e-04
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Length = 554 Back     alignment and structure
 Score =  829 bits (2144), Expect = 0.0
 Identities = 275/399 (68%), Positives = 333/399 (83%), Gaps = 1/399 (0%)

Query: 8   RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
           RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI  
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAA 214

Query: 67  GVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRAL 126
           G+FEV ST GDTHLGGEDFD R++ +FI   K+KH KDIS++KRA+ +LR   ERAKR L
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274

Query: 127 SSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
           SS  Q  +EI+SL++GIDF   +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334

Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLL 246
           VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ  ILSG+  +  +D+LLL
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394

Query: 247 DVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCR 306
           DV PL+LGIET GGVMT LI RNT IPTK++Q FTTY D Q  V IQV+EGER++TKD  
Sbjct: 395 DVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNN 454

Query: 307 LLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEE 366
           LLGKF+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+E+
Sbjct: 455 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKED 514

Query: 367 IDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQI 405
           I+RMV+EAE++  ED+K ++K+ ++NSLE+Y +NMK  +
Sbjct: 515 IERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Length = 675 Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Length = 605 Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Length = 509 Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ... Length = 404 Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Length = 383 Back     alignment and structure
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Length = 152 Back     alignment and structure
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Length = 152 Back     alignment and structure
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Length = 152 Back     alignment and structure
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Length = 219 Back     alignment and structure
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Length = 227 Back     alignment and structure
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Length = 182 Back     alignment and structure
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Length = 151 Back     alignment and structure
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Length = 135 Back     alignment and structure
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans} Length = 120 Back     alignment and structure
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A Length = 113 Back     alignment and structure
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1 Length = 113 Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Length = 272 Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Length = 320 Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Length = 329 Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Length = 346 Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Length = 355 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Length = 377 Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Length = 344 Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Length = 515 Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Length = 484 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query487
4b9q_A605 Chaperone protein DNAK; HET: ATP; 2.40A {Escherich 100.0
3d2f_A675 Heat shock protein homolog SSE1; nucleotide exchan 100.0
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 100.0
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 100.0
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 100.0
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 100.0
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 100.0
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 100.0
4e81_A219 Chaperone protein DNAK; chaperone; 1.90A {Escheric 100.0
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 100.0
1u00_A227 HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A 100.0
3n8e_A182 Stress-70 protein, mitochondrial; beta-sandwich, h 100.0
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 99.98
3h0x_A152 78 kDa glucose-regulated protein homolog; structur 99.97
3dob_A152 Heat shock 70 kDa protein F44E5.5; structural geno 99.97
3dqg_A151 Heat shock 70 kDa protein F; structural genomics, 99.97
2op6_A152 Heat shock 70 kDa protein D; HSP70/peptide-binding 99.96
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 99.91
1q5l_A135 Chaperone protein DNAK; HSP70, chaperone, heat sho 99.9
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 99.88
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 99.88
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 99.88
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 99.82
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 99.8
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 99.76
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 99.55
3js6_A355 Uncharacterized PARM protein; partition, segregati 99.53
3lof_A113 Heat shock 70 kDa protein 1; structural genomics, 99.49
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 99.47
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 99.45
2p32_A120 Heat shock 70 kDa protein A; three-helix bundle, c 99.35
1nbw_A607 Glycerol dehydratase reactivase alpha subunit; mol 99.33
2d0o_A610 DIOL dehydratase-reactivating factor large subunit 99.32
1ud0_A113 HSC70, 70 kDa heat-shock-like protein; chaperone; 99.25
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 98.97
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 98.59
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 98.41
4fo0_A593 Actin-related protein 8; chromatin remodeling, nuc 98.11
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 97.63
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 97.3
4am6_A655 Actin-like protein ARP8; nuclear protein, chromati 97.18
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 96.22
3l0q_A554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 96.2
4bc3_A538 Xylulose kinase; transferase, glucuronate xyluloki 96.15
3hz6_A511 Xylulokinase; xylulose, structural genomic, chromo 96.13
2zf5_O497 Glycerol kinase; hyperthermophilic archaeon, ATP-b 96.1
3ll3_A504 Gluconate kinase; xylulose kinase, nysgx, ATP, ADP 95.91
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 95.84
3mdq_A315 Exopolyphosphatase; structural genomics, joint cen 95.79
3jvp_A572 Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su 95.5
3ifr_A508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 95.49
3g25_A501 Glycerol kinase; IDP00743, ATP-binding, glycerol m 95.48
2dpn_A495 Glycerol kinase; thermus thermophilus HB8, structu 95.48
1t6c_A315 Exopolyphosphatase; alpha/beta protein, actin-like 95.47
4e1j_A520 Glycerol kinase; structural genomics, PSI-biology, 95.22
3h3n_X506 Glycerol kinase; ATP-binding, glycerol metabolism, 95.22
2p3r_A510 Glycerol kinase; glycerol metabolism, allosteric r 95.22
3ezw_A526 Glycerol kinase; glycerol metabolism, allosteric r 95.01
2d4w_A504 Glycerol kinase; alpha and beta protein, ribonucle 94.93
2w40_A503 Glycerol kinase, putative; closed conformation, ma 94.92
2uyt_A489 Rhamnulokinase; rhamnose degradation, IN-LINE phos 94.47
2ivn_A330 O-sialoglycoprotein endopeptidase; UP1 keops compl 92.98
3h6e_A482 Carbohydrate kinase, FGGY; novosphingobium aromati 92.1
3cer_A343 Possible exopolyphosphatase-like protein; NESG, BL 90.69
1u6z_A513 Exopolyphosphatase; alpha/beta protein, askha (ace 89.16
3hi0_A508 Putative exopolyphosphatase; 17739545, structural 88.93
3qbx_A371 Anhydro-N-acetylmuramic acid kinase; acetate and s 86.19
3eno_A334 Putative O-sialoglycoprotein endopeptidase; hydrol 81.59
3cqy_A370 Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1 81.2
3vth_A761 Hydrogenase maturation factor; carbamoyltransfer, 80.37
3en9_A540 Glycoprotease, O-sialoglycoprotein endopeptidase/p 80.19
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D Back     alignment and structure
Probab=100.00  E-value=4.3e-83  Score=681.71  Aligned_cols=453  Identities=51%  Similarity=0.819  Sum_probs=432.0

Q ss_pred             CCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeC----CeEEEEEecC
Q 011367            1 MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDN----GVFEVLSTNG   76 (487)
Q Consensus         1 ~~f~~~qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~----~~~~v~~~~~   76 (487)
                      .||++.||++|++||++|||+++++++||+|||++|++.....+.++||||+||||||+|++++.+    +.++++++.|
T Consensus       144 a~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~g  223 (605)
T 4b9q_A          144 AYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNG  223 (605)
T ss_dssp             TTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecC
Confidence            599999999999999999999999999999999999987765678999999999999999999988    8999999999


Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCC----ceeEEEecHH
Q 011367           77 DTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDG----IDFSEPLTRA  152 (487)
Q Consensus        77 ~~~lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~----~~~~~~itr~  152 (487)
                      +.++||.+||++|++|+.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+    .++.++|||+
T Consensus       224 d~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~  303 (605)
T 4b9q_A          224 DTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRA  303 (605)
T ss_dssp             ETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHH
T ss_pred             CCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHH
Confidence            999999999999999999999999999999999999999999999999999999988888765543    6788999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhc
Q 011367          153 RFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGIL  232 (487)
Q Consensus       153 ~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~  232 (487)
                      +|++++.|+++++..+|+++|+.+++...+|+.|+||||+|++|+|++.|++.| +..+..+.||++|||+|||++|+.+
T Consensus       304 ~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l  382 (605)
T 4b9q_A          304 KLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVL  382 (605)
T ss_dssp             HHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999 6788899999999999999999999


Q ss_pred             cCCCCCCccceEEEeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEE
Q 011367          233 SGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFD  312 (487)
Q Consensus       233 s~~~~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~  312 (487)
                      ++.    .+++.+.|++|++||+++.+|.|.++||+|++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.
T Consensus       383 ~~~----~~~~~l~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~  458 (605)
T 4b9q_A          383 TGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFN  458 (605)
T ss_dssp             HTS----SCSEEEECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEE
T ss_pred             cCC----CCceEEEeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEE
Confidence            876    5689999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCCCCCCCCeEEEEEEEeCCccEEEEEEecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhh
Q 011367          313 LSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARN  392 (487)
Q Consensus       313 l~~i~~~~~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N  392 (487)
                      |.|+||.|.|.++|+|+|++|.||+|+|++.+..||++.+++|+.. ..||+++|++|+++++++..+|++.+++.+++|
T Consensus       459 l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n  537 (605)
T 4b9q_A          459 LDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRN  537 (605)
T ss_dssp             EECCCCCSTTCCCEEEEEEECTTSCEEEEEEETTTCCEECCEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCcCCCceEEEEEEEcCCcEEEEEEEecCCCcEEEEEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999887 689999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 011367          393 SLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ  465 (487)
Q Consensus       393 ~LE~~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~a~~e~~~~kl~eL~~~~~pi~~r~~~  465 (487)
                      +||+|+|.+++.+.+   +..++++++++.+...++++++||+.+   +.++|++++++|++.+.||..++++
T Consensus       538 ~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~  604 (605)
T 4b9q_A          538 QGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ  604 (605)
T ss_dssp             HHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHh---hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999974   788999999999999999999999986   5899999999999999999999875
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Back     alignment and structure
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Back     alignment and structure
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Back     alignment and structure
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Back     alignment and structure
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Back     alignment and structure
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Back     alignment and structure
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans} Back     alignment and structure
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 Back     alignment and structure
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A Back     alignment and structure
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1 Back     alignment and structure
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Back     alignment and structure
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* Back     alignment and structure
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Back     alignment and structure
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} Back     alignment and structure
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Back     alignment and structure
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} Back     alignment and structure
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* Back     alignment and structure
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} Back     alignment and structure
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* Back     alignment and structure
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Back     alignment and structure
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O Back     alignment and structure
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* Back     alignment and structure
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} Back     alignment and structure
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* Back     alignment and structure
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* Back     alignment and structure
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* Back     alignment and structure
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} Back     alignment and structure
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* Back     alignment and structure
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} Back     alignment and structure
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A* Back     alignment and structure
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} Back     alignment and structure
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis} Back     alignment and structure
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A Back     alignment and structure
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 487
d1bupa2193 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATP 1e-83
d1dkgd2198 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATP 3e-80
d1yuwa1159 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus 5e-72
d1dkza2118 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxI 5e-55
d1u00a2115 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc6 3e-48
d1jcea2196 c.55.1.1 (A:141-336) Prokaryotic actin homolog Mre 9e-32
d1ud0a_84 a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 7e-31
d2zgya2163 c.55.1.1 (A:158-320) Plasmid segregation protein P 3e-26
d1dkza197 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 8e-23
d2fsja1161 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 1e-18
d1u00a1112 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) 5e-18
d1bupa1185 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPas 3e-14
d1dkgd1183 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPas 1e-13
d1jcea1137 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB 2e-09
d1e4ft2191 c.55.1.1 (T:200-390) Cell division protein FtsA {T 0.001
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 193 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  254 bits (650), Expect = 1e-83
 Identities = 130/192 (67%), Positives = 161/192 (83%)

Query: 42  GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 101
           G E+N+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +FI   K+KH
Sbjct: 2   GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 61

Query: 102 GKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDL 161
            KDIS++KRA+ +LR   ERAKR LSS  Q  +EI+SL++GIDF   +TRARFEELN DL
Sbjct: 62  KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 121

Query: 162 FRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAV 221
           FR T+ PV+KA+ DA L+K+QI +IVLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAV
Sbjct: 122 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 181

Query: 222 AYGAAVQGGILS 233
           AYGAAVQ  ILS
Sbjct: 182 AYGAAVQAAILS 193
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 198 Back     information, alignment and structure
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 159 Back     information, alignment and structure
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Length = 118 Back     information, alignment and structure
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 196 Back     information, alignment and structure
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 84 Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Length = 163 Back     information, alignment and structure
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]} Length = 97 Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 161 Back     information, alignment and structure
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Length = 112 Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 185 Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 183 Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 137 Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Length = 191 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query487
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1dkgd2198 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1yuwa1159 DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} 100.0
d1dkza2118 DnaK {Escherichia coli [TaxId: 562]} 99.93
d1u00a2115 Chaperone protein hscA (Hsc66) {Escherichia coli [ 99.92
d1jcea2196 Prokaryotic actin homolog MreB {Thermotoga maritim 99.87
d1ud0a_84 DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} 99.71
d2zgya2163 Plasmid segregation protein ParM {Escherichia coli 99.6
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 99.53
d2fsja1161 Hypothetical protein Ta0583 {Archaeon Thermoplasma 99.38
d1u00a1112 Chaperone protein hscA (Hsc66) {Escherichia coli [ 99.27
d1dkza197 DnaK {Escherichia coli [TaxId: 562]} 99.24
d1nbwa3202 ATPase domain of the glycerol dehydratase reactiva 98.13
d2d0oa3203 Diol dehydratase-reactivating factor large subunit 98.12
d1k8ka2258 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 98.1
d2fxua2225 Actin {Cow (Bos taurus) [TaxId: 9913]} 98.03
d1huxa_259 Hydroxyglutaryl-CoA dehydratase component A {Acida 97.78
d1k8kb1190 Actin-related protein 2, Arp2 {Cow (Bos taurus) [T 97.62
d2i7na2212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 95.98
d1r59o2235 Glycerol kinase {Enterococcus casseliflavus [TaxId 95.88
d2p3ra2247 Glycerol kinase {Escherichia coli [TaxId: 562]} 95.4
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 94.4
d1t6ca2180 Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 91.15
d1u6za3177 Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 87.94
d2hoea2169 N-acetylglucosamine kinase {Thermotoga maritima [T 86.19
d2ap1a1186 Putative regulator protein YcfX {Salmonella typhim 84.92
d2aa4a2170 N-acetylmannosamine kinase NanK {Escherichia coli 83.58
d2gupa2175 Hypothetical protein SP2142 {Streptococcus pneumon 82.43
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=6.6e-41  Score=304.23  Aligned_cols=190  Identities=68%  Similarity=1.074  Sum_probs=183.3

Q ss_pred             CcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHH
Q 011367           44 EKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAK  123 (487)
Q Consensus        44 ~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K  123 (487)
                      .++||||||||||||+|++++.++.++++++.|+..+||.+||++|++|+.++|.++++.++..+++.+.+|+.+||++|
T Consensus         4 e~~VlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K   83 (193)
T d1bupa2           4 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK   83 (193)
T ss_dssp             CEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEEeCCCeEEEEEEEEeCCEEEEEEecCCCCcchhHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHccCCceeEEeeecccCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHH
Q 011367          124 RALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLK  203 (487)
Q Consensus       124 ~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~  203 (487)
                      +.||.+.++.+.++.+..+.++.++|||++|+++++|+++++.++|+++|+++++.+.+|+.|+||||+|++|+|++.|+
T Consensus        84 ~~ls~~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGG~sr~p~v~~~i~  163 (193)
T d1bupa2          84 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ  163 (193)
T ss_dssp             HHHTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHH
T ss_pred             hccCCCceEEEEEecccCCCccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCCCCchhHHhhhhhhhhhhcc
Q 011367          204 DYFDGKEPNKGVNPDEAVAYGAAVQGGILS  233 (487)
Q Consensus       204 ~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s  233 (487)
                      ++|++.++..+.||++|||+|||++|+.+|
T Consensus       164 ~~f~~~~i~~~~~p~~aVa~GaA~~aa~ls  193 (193)
T d1bupa2         164 DFFNGKELNKSINPDEAVAYGAAVQAAILS  193 (193)
T ss_dssp             HHTTTCCCBCSSCGGGHHHHHHHHHHHHHC
T ss_pred             HHcCCCCCCCCCChHHHHHHHHHHHHHhhC
Confidence            999878888889999999999999999875
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]} Back     information, alignment and structure
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure