Citrus Sinensis ID: 011392

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------
MLPQKQAEEAIVSNFSETEHEGGGKEEGREDEQQQQHSMLSMKSFLWHGGSAWDAWFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGASHTAPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTIPSATAVYWSFGDQLLNHSNAFSLLPKNRWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPFFLPSWTAMYAFNIFVVVWVFVVGFGFGGWASVTNFVRQVDSFGLFAKCYQCKPPPPPAGAAAAGAHH
cccccccHHHHcccccccccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHEEEccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccc
cccHHHHEEEEEccccccccccccccccccccccccccEEEEcEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccHHHccccccccccccccccccc
MLPQKQAEEAIVSNfsetehegggkeegredeQQQQHSMLSMKSFlwhggsawdaWFSCASNQVAQVLLTLpysfsqmgMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGAccattvfipsfhnyRIWSFLGLGMTTYTAWYLTIAAVVHGqvegashtaptKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTIPSATAVYWSFGDqllnhsnafsllpknrWRDAAVILMLIHQFITfgfactplYFVWEKVIGMHDTKSICLRALarlpvvipIWFLAIifpffgpinSAVGALLVSFTVYIIPSLAHMLTYRKASArqnaaekppfflpswtAMYAFNIFVVVWVFVVGFGFGGWASVTNFVRQVDsfglfakcyqckpppppagaaaagahh
MLPQKQAEEAivsnfsetehegggkeegrEDEQQQQHSMLSMKSFLWHGGSAWDAWFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGASHTAPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTIPSATAVYWSFGDQLLNHSNAFSLLPKNRWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPFFLPSWTAMYAFNIFVVVWVFVVGFGFGGWASVTNFVRQVDSFGLFAKCYQCKPPPPPAGAAAAGAHH
MLPQKQAEEAIVSNFSetehegggkeegredeqqqqHSMLSMKSFLWHGGSAWDAWFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGASHTAPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTIPSATAVYWSFGDQLLNHSNAFSLLPKNRWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPFFLPSWTAMYAFNIfvvvwvfvvgfgfggwASVTNFVRQVDSFGLFAKCYQCKpppppagaaaagaHH
******************************************KSFLWHGGSAWDAWFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGASHTAPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTIPSATAVYWSFGDQLLNHSNAFSLLPKNRWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPFFLPSWTAMYAFNIFVVVWVFVVGFGFGGWASVTNFVRQVDSFGLFAKCYQC****************
**********************************************WHGGSAWDAWFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGASHTAPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTIPSATAVYWSFGDQLLNHSNAFSLLPKNRWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPFFLPSWTAMYAFNIFVVVWVFVVGFGFGGWASVTNFVRQVDSFGLFAKCYQC****************
********EAIVSNF***********************MLSMKSFLWHGGSAWDAWFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGASHTAPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTIPSATAVYWSFGDQLLNHSNAFSLLPKNRWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPFFLPSWTAMYAFNIFVVVWVFVVGFGFGGWASVTNFVRQVDSFGLFAKCYQCKPP*************
*****QAEE***SNFS********************HSMLSMKSFLWHGGSAWDAWFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGASHTAPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTIPSATAVYWSFGDQLLNHSNAFSLLPKNRWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPFFLPSWTAMYAFNIFVVVWVFVVGFGFGGWASVTNFVRQVDSFGLFAKCYQCKPPP************
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
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MLPQKQAEEAIVSNFSETEHEGGGKEEGREDEQQQQHSMLSMKSFLWHGGSAWDAWFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGASHTAPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTIPSATAVYWSFGDQLLNHSNAFSLLPKNRWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPFFLPSWTAMYAFNIFVVVWVFVVGFGFGGWASVTNFVRQVDSFGLFAKCYQCKPPPPPAGAAAAGAHH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query487 2.2.26 [Sep-21-2011]
Q9FEL7484 Auxin transporter-like pr N/A no 0.956 0.962 0.886 0.0
Q8L884482 Auxin transporter-like pr N/A no 0.960 0.970 0.858 0.0
Q96247485 Auxin transporter protein yes no 0.989 0.993 0.844 0.0
Q5N892492 Auxin transporter-like pr yes no 1.0 0.989 0.823 0.0
Q9LFB2488 Auxin transporter-like pr no no 0.967 0.965 0.835 0.0
Q9FEL8479 Auxin transporter-like pr N/A no 0.983 1.0 0.804 0.0
Q688J2482 Auxin transporter-like pr no no 0.967 0.977 0.815 0.0
Q8L883490 Auxin transporter-like pr N/A no 0.979 0.973 0.747 0.0
Q9S836483 Auxin transporter-like pr no no 0.938 0.946 0.771 0.0
Q7XGU4547 Auxin transporter-like pr no no 0.899 0.800 0.786 0.0
>sp|Q9FEL7|LAX2_MEDTR Auxin transporter-like protein 2 OS=Medicago truncatula GN=LAX2 PE=2 SV=1 Back     alignment and function desciption
 Score =  872 bits (2253), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/474 (88%), Positives = 445/474 (93%), Gaps = 8/474 (1%)

Query: 1   MLPQKQAEEAIVSNFSETEHEGG--GKEEGREDEQQQQHSMLSMKSFLWHGGSAWDAWFS 58
           MLPQKQ EEAIVS+F+ET+ + G  G+EE  ED     HS  S+K+FLWHGGS WDAWFS
Sbjct: 1   MLPQKQGEEAIVSSFNETDQQEGVVGREEEVED-----HS-FSVKNFLWHGGSVWDAWFS 54

Query: 59  CASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVS 118
           CASNQVAQVLLTLPYSFSQ+GMLSGILLQ+FYG LGSWTAYLISVLYVEYRSRKEKENV+
Sbjct: 55  CASNQVAQVLLTLPYSFSQLGMLSGILLQVFYGILGSWTAYLISVLYVEYRSRKEKENVN 114

Query: 119 FKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWT 178
           FKNHVIQWFEVLDGLLGPYWKA+GLAFNCTFLLFGSVIQLIACASNIYYIND LDKRTWT
Sbjct: 115 FKNHVIQWFEVLDGLLGPYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWT 174

Query: 179 YIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGASHTAPTKLVL 238
           YIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIA++VHGQ E  +HT P KLVL
Sbjct: 175 YIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASIVHGQAENVTHTGPKKLVL 234

Query: 239 YFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTIPSATAVYWSFGDQ 298
           YFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYL ATLYVFTLTIPSATAVYW+FGD+
Sbjct: 235 YFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLMATLYVFTLTIPSATAVYWAFGDE 294

Query: 299 LLNHSNAFSLLPKNRWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRAL 358
           LLNHSNAFSLLPKN WRD AVILMLIHQFITFGFACTPLYFVWEKVIGMHDT+SICLRAL
Sbjct: 295 LLNHSNAFSLLPKNGWRDGAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTRSICLRAL 354

Query: 359 ARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKP 418
           ARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPS AHMLTYRKASAR+NAAEKP
Sbjct: 355 ARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSAAHMLTYRKASARKNAAEKP 414

Query: 419 PFFLPSWTAMYAFNIFVVVWVFVVGFGFGGWASVTNFVRQVDSFGLFAKCYQCK 472
           PFF+PSWTAMY FN F+V+WV VVGFGFGGWAS+TNF+RQ+D+FGLFAKCYQCK
Sbjct: 415 PFFMPSWTAMYIFNAFIVIWVLVVGFGFGGWASMTNFIRQIDTFGLFAKCYQCK 468
Carrier protein involved in proton-driven auxin influx. Mediates the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips by contributing to the loading of auxin in vascular tissues and facilitating acropetal (base to tip) auxin transport within inner tissues of the root apex, and basipetal (tip to base) auxin transport within outer tissues of the root apex (By similarity). May be involved in lateral roots and nodules formation.
Medicago truncatula (taxid: 3880)
>sp|Q8L884|LAX4_MEDTR Auxin transporter-like protein 4 OS=Medicago truncatula GN=LAX4 PE=2 SV=1 Back     alignment and function description
>sp|Q96247|AUX1_ARATH Auxin transporter protein 1 OS=Arabidopsis thaliana GN=AUX1 PE=1 SV=1 Back     alignment and function description
>sp|Q5N892|LAX1_ORYSJ Auxin transporter-like protein 1 OS=Oryza sativa subsp. japonica GN=Os01g0856500 PE=2 SV=2 Back     alignment and function description
>sp|Q9LFB2|LAX1_ARATH Auxin transporter-like protein 1 OS=Arabidopsis thaliana GN=LAX1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1 OS=Medicago truncatula GN=LAX1 PE=2 SV=1 Back     alignment and function description
>sp|Q688J2|LAX2_ORYSJ Auxin transporter-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0447200 PE=2 SV=1 Back     alignment and function description
>sp|Q8L883|LAX5_MEDTR Auxin transporter-like protein 5 OS=Medicago truncatula GN=LAX5 PE=2 SV=1 Back     alignment and function description
>sp|Q9S836|LAX2_ARATH Auxin transporter-like protein 2 OS=Arabidopsis thaliana GN=LAX2 PE=2 SV=1 Back     alignment and function description
>sp|Q7XGU4|LAX3_ORYSJ Auxin transporter-like protein 3 OS=Oryza sativa subsp. japonica GN=Os10g0147400 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query487
56562199483 putative auxin influx carrier protein [P 0.991 1.0 0.887 0.0
365189136481 auxin influx carrier protein [Mangifera 0.987 1.0 0.895 0.0
449529890478 PREDICTED: auxin transporter-like protei 0.981 1.0 0.876 0.0
449439906478 PREDICTED: auxin transporter-like protei 0.981 1.0 0.874 0.0
255581063488 amino acid transporter, putative [Ricinu 0.960 0.959 0.900 0.0
356568064491 PREDICTED: auxin transporter-like protei 0.967 0.959 0.892 0.0
356520998494 PREDICTED: auxin transporter-like protei 0.967 0.953 0.890 0.0
126217792480 auxin influx transport protein [Casuarin 0.956 0.970 0.906 0.0
357505879484 Auxin transporter-like protein [Medicago 0.956 0.962 0.886 0.0
356504042483 PREDICTED: auxin transporter-like protei 0.989 0.997 0.870 0.0
>gi|56562199|emb|CAI05895.1| putative auxin influx carrier protein [Prunus avium] Back     alignment and taxonomy information
 Score =  898 bits (2321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/487 (88%), Positives = 458/487 (94%), Gaps = 4/487 (0%)

Query: 1   MLPQKQAEEAIVSNFSETEHEGGGKEEGREDEQQQQHSMLSMKSFLWHGGSAWDAWFSCA 60
           ML QKQAEEAIVSNFSE  H+  GKE+  +D++++  S+ ++K+FLWHGGS WDAWFSCA
Sbjct: 1   MLAQKQAEEAIVSNFSEA-HDHEGKEDHHQDKEEENTSLFNVKNFLWHGGSVWDAWFSCA 59

Query: 61  SNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFK 120
           SNQVAQVLLTLPYSFSQ+G+LSGILLQIFYG +GSWTAYLISVLY+EYRSRKEKENV+FK
Sbjct: 60  SNQVAQVLLTLPYSFSQLGLLSGILLQIFYGIVGSWTAYLISVLYIEYRSRKEKENVNFK 119

Query: 121 NHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYI 180
           NHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYI
Sbjct: 120 NHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYI 179

Query: 181 FGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGASHTAPTKLVLYF 240
           FGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQ EG +HTAPTKLVLYF
Sbjct: 180 FGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQKEGVTHTAPTKLVLYF 239

Query: 241 TGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTIPSATAVYWSFGDQLL 300
           TGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFAT+YVFTLTIPSAT+VYW+FGD+LL
Sbjct: 240 TGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATVYVFTLTIPSATSVYWAFGDELL 299

Query: 301 NHSNAFSLLPKNRWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALAR 360
           NH+NAFSLLPKN WRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALAR
Sbjct: 300 NHANAFSLLPKNAWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALAR 359

Query: 361 LPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPF 420
           LPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPF
Sbjct: 360 LPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPF 419

Query: 421 FLPSWTAMYAFNIFVVVWVFVVGFGFGGWASVTNFVRQVDSFGLFAKCYQCKPPPPPAGA 480
           FLPSWTAMY  N F+VVWV V+GFGFGGWAS+TNFVRQVD+FGLFAKCYQC  P  P   
Sbjct: 420 FLPSWTAMYVINSFIVVWVLVIGFGFGGWASMTNFVRQVDNFGLFAKCYQCNSPKLP--- 476

Query: 481 AAAGAHH 487
           AAA  HH
Sbjct: 477 AAAAPHH 483

Source: Prunus avium

Species: Prunus avium

Genus: Prunus

Family: Rosaceae

Order: Rosales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|365189136|emb|CCF23025.1| auxin influx carrier protein [Mangifera indica] gi|381280181|gb|AFG18185.1| auxin influx carrier component [Mangifera indica] Back     alignment and taxonomy information
>gi|449529890|ref|XP_004171931.1| PREDICTED: auxin transporter-like protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449439906|ref|XP_004137726.1| PREDICTED: auxin transporter-like protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255581063|ref|XP_002531347.1| amino acid transporter, putative [Ricinus communis] gi|223529045|gb|EEF31031.1| amino acid transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356568064|ref|XP_003552233.1| PREDICTED: auxin transporter-like protein 2-like [Glycine max] Back     alignment and taxonomy information
>gi|356520998|ref|XP_003529145.1| PREDICTED: auxin transporter-like protein 2-like [Glycine max] Back     alignment and taxonomy information
>gi|126217792|gb|ABN81349.1| auxin influx transport protein [Casuarina glauca] gi|126217794|gb|ABN81350.1| auxin influx transport protein [Casuarina glauca] Back     alignment and taxonomy information
>gi|357505879|ref|XP_003623228.1| Auxin transporter-like protein [Medicago truncatula] gi|75262336|sp|Q9FEL7.1|LAX2_MEDTR RecName: Full=Auxin transporter-like protein 2; AltName: Full=AUX1-like protein 2; AltName: Full=MtLAX2 gi|10800920|emb|CAC12996.1| putative AUX1-like permease [Medicago truncatula] gi|21586462|gb|AAM55304.1| auxin influx carrier protein [Medicago truncatula] gi|355498243|gb|AES79446.1| Auxin transporter-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356504042|ref|XP_003520808.1| PREDICTED: auxin transporter-like protein 4-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query487
TAIR|locus:2005496485 AUX1 "AT2G38120" [Arabidopsis 0.917 0.921 0.854 2.6e-214
TAIR|locus:2150089488 LAX1 "AT5G01240" [Arabidopsis 0.969 0.967 0.799 3.1e-209
TAIR|locus:2047102483 LAX2 "AT2G21050" [Arabidopsis 0.882 0.890 0.788 8.3e-193
TAIR|locus:2203226470 LAX3 "AT1G77690" [Arabidopsis 0.882 0.914 0.762 7.1e-187
WB|WBGene00012529519 Y32F6A.4 [Caenorhabditis elega 0.718 0.674 0.218 5.9e-12
UNIPROTKB|Q85V22441 ht "Histidine amino acid trans 0.706 0.780 0.219 1.2e-11
TAIR|locus:2008605441 AT1G67640 "AT1G67640" [Arabido 0.694 0.766 0.220 2e-10
WB|WBGene00022012465 Y59H11AR.4 [Caenorhabditis ele 0.706 0.739 0.237 1.7e-09
TAIR|locus:2024071441 LHT2 "lysine histidine transpo 0.722 0.798 0.218 5.6e-09
WB|WBGene00019837494 R02F2.8 [Caenorhabditis elegan 0.663 0.653 0.216 9e-09
TAIR|locus:2005496 AUX1 "AT2G38120" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2071 (734.1 bits), Expect = 2.6e-214, P = 2.6e-214
 Identities = 382/447 (85%), Positives = 398/447 (89%)

Query:    41 SMKSFLWHGGSAWDAWFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYL 100
             ++ +FLWHGGS WDAWFSCASNQVAQVLLTLPYSFSQ+GMLSGI+LQIFYG LGSWTAYL
Sbjct:    37 NLSNFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAYL 96

Query:   101 ISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIA 160
             ISVLYVEYR+RKEKE  SFKNHVIQWFEVLDGLLG YWKA+GLAFNCTFLLFGSVIQLIA
Sbjct:    97 ISVLYVEYRARKEKEGKSFKNHVIQWFEVLDGLLGSYWKALGLAFNCTFLLFGSVIQLIA 156

Query:   161 CASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAV 220
             CASNIYYIND LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYL IA++
Sbjct:   157 CASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIASI 216

Query:   221 VHGQVEGASHTAPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYV 280
             +HGQ EG  H+ PTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYL ATLYV
Sbjct:   217 IHGQAEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLMATLYV 276

Query:   281 FTLTIPSATAVYWSFGDQLLNHSNAFSLLPKNRWRDAAVILMLIHQFITFGFACTPLYFV 340
             FTLTIPSA AVYW+FGD LL+HSNAFSL+PKN WRDAAVILMLIHQFITFGFACTPLYFV
Sbjct:   277 FTLTIPSAAAVYWAFGDALLDHSNAFSLMPKNAWRDAAVILMLIHQFITFGFACTPLYFV 336

Query:   341 WEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLA 400
             WEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLA
Sbjct:   337 WEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLA 396

Query:   401 HMLTYRKASARQNAAEKPPFFLPSWTAMYAFNIXXXXXXXXXXXXXXXXASVTNFVRQVD 460
             HMLTYR ASARQNAAEKPPFF+PSWTAMY  N                 ASVTNFVRQVD
Sbjct:   397 HMLTYRSASARQNAAEKPPFFMPSWTAMYVLNAFVVVWVLIVGFGFGGWASVTNFVRQVD 456

Query:   461 SFGLFAKCYQCKXXXXXXXXXXXXXHH 487
             +FGLFAKCYQCK             HH
Sbjct:   457 TFGLFAKCYQCKPAAAAAHAPVSALHH 483
GO:0005215 "transporter activity" evidence=ISS
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0006865 "amino acid transport" evidence=ISS
GO:0009723 "response to ethylene stimulus" evidence=NAS
GO:0009733 "response to auxin stimulus" evidence=NAS
GO:0015171 "amino acid transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=ISS
GO:0009986 "cell surface" evidence=IDA
GO:0009624 "response to nematode" evidence=IEP
GO:0010328 "auxin influx transmembrane transporter activity" evidence=IDA
GO:0009926 "auxin polar transport" evidence=RCA;TAS
GO:0001736 "establishment of planar polarity" evidence=IGI
GO:0048765 "root hair cell differentiation" evidence=IGI;RCA
GO:0005768 "endosome" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0010311 "lateral root formation" evidence=IGI;IMP
GO:0010011 "auxin binding" evidence=IDA
GO:0048829 "root cap development" evidence=IMP
GO:0000271 "polysaccharide biosynthetic process" evidence=RCA
GO:0006949 "syncytium formation" evidence=RCA
GO:0007155 "cell adhesion" evidence=RCA
GO:0007389 "pattern specification process" evidence=RCA
GO:0008361 "regulation of cell size" evidence=RCA
GO:0009825 "multidimensional cell growth" evidence=RCA
GO:0009932 "cell tip growth" evidence=RCA
GO:0010015 "root morphogenesis" evidence=RCA
GO:0010090 "trichome morphogenesis" evidence=RCA
GO:0010218 "response to far red light" evidence=RCA
GO:0010817 "regulation of hormone levels" evidence=RCA
GO:0040007 "growth" evidence=RCA
GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
GO:0048767 "root hair elongation" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
GO:0009958 "positive gravitropism" evidence=IMP
TAIR|locus:2150089 LAX1 "AT5G01240" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2047102 LAX2 "AT2G21050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2203226 LAX3 "AT1G77690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00012529 Y32F6A.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q85V22 ht "Histidine amino acid transporter" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
TAIR|locus:2008605 AT1G67640 "AT1G67640" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00022012 Y59H11AR.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
TAIR|locus:2024071 LHT2 "lysine histidine transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00019837 R02F2.8 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LFB2LAX1_ARATHNo assigned EC number0.83570.96710.9651nono
Q5N892LAX1_ORYSJNo assigned EC number0.82311.00.9898yesno
Q53JG7LAX4_ORYSJNo assigned EC number0.71120.96910.9833nono
Q9S836LAX2_ARATHNo assigned EC number0.77130.93830.9461nono
Q96247AUX1_ARATHNo assigned EC number0.84470.98970.9938yesno
Q9FEL7LAX2_MEDTRNo assigned EC number0.88600.95680.9628N/Ano
Q9FEL6LAX3_MEDTRNo assigned EC number0.74780.94860.9935N/Ano
Q688J2LAX2_ORYSJNo assigned EC number0.81570.96710.9771nono
Q9CA25LAX3_ARATHNo assigned EC number0.74100.96501.0nono
Q8L883LAX5_MEDTRNo assigned EC number0.74740.97940.9734N/Ano
Q8L884LAX4_MEDTRNo assigned EC number0.85800.96090.9709N/Ano
Q7XGU4LAX3_ORYSJNo assigned EC number0.78630.89930.8007nono
Q9FEL8LAX1_MEDTRNo assigned EC number0.80490.98351.0N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query487
PLN03074473 PLN03074, PLN03074, auxin influx permease; Provisi 0.0
pfam01490406 pfam01490, Aa_trans, Transmembrane amino acid tran 1e-86
>gnl|CDD|215559 PLN03074, PLN03074, auxin influx permease; Provisional Back     alignment and domain information 
 Score =  944 bits (2442), Expect = 0.0
 Identities = 406/477 (85%), Positives = 428/477 (89%), Gaps = 4/477 (0%)

Query: 1   MLPQKQAEEAIVSNFSETEHEGGGKEEGREDEQQQQHSMLSMKSFLWHGGSAWDAWFSCA 60
           M+  KQAE AIV N+ E E EGGG++E              +KS LWHGGS +DAWFSCA
Sbjct: 1   MMAGKQAETAIVGNYVEMEVEGGGEKEEGGG----GGGKSRLKSLLWHGGSVYDAWFSCA 56

Query: 61  SNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFK 120
           SNQVAQVLLTLPYSFSQ+GMLSGIL QIFYG LGSWTAYLISVLYVEYR+RKE+E V FK
Sbjct: 57  SNQVAQVLLTLPYSFSQLGMLSGILFQIFYGLLGSWTAYLISVLYVEYRARKEREKVDFK 116

Query: 121 NHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYI 180
           NHVIQWFEVLDGLLGPYWK VGLAFNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYI
Sbjct: 117 NHVIQWFEVLDGLLGPYWKNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYI 176

Query: 181 FGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGASHTAPTKLVLYF 240
           FGACCATTVFIPSFHNYRIWSFLGL MTTYTAWY+TIAA+ HGQVEG  H+ PTKLVLYF
Sbjct: 177 FGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYMTIAALSHGQVEGVKHSGPTKLVLYF 236

Query: 241 TGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTIPSATAVYWSFGDQLL 300
           TGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYL ATLYV TLT+PSA AVYW+FGD+LL
Sbjct: 237 TGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLAATLYVLTLTLPSAAAVYWAFGDELL 296

Query: 301 NHSNAFSLLPKNRWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALAR 360
            HSNAFSLLP++ WRDAAVILMLIHQFITFGFACTPLYFVWEK IG+HDTKSICLRALAR
Sbjct: 297 THSNAFSLLPRSGWRDAAVILMLIHQFITFGFACTPLYFVWEKAIGVHDTKSICLRALAR 356

Query: 361 LPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPF 420
           LPVV+PIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYR ASARQNAAEKPPF
Sbjct: 357 LPVVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRSASARQNAAEKPPF 416

Query: 421 FLPSWTAMYAFNIFVVVWVFVVGFGFGGWASVTNFVRQVDSFGLFAKCYQCKPPPPP 477
           FLPSWT MY  N FVVVWV VVGFGFGGWAS+TNFVRQ+D+FGLFAKCYQC PP P 
Sbjct: 417 FLPSWTGMYVVNAFVVVWVLVVGFGFGGWASMTNFVRQIDTFGLFAKCYQCPPPSPA 473

Length = 473
>gnl|CDD|216528 pfam01490, Aa_trans, Transmembrane amino acid transporter protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 487
PLN03074473 auxin influx permease; Provisional 100.0
KOG1304449 consensus Amino acid transporters [Amino acid tran 100.0
PTZ00206467 amino acid transporter; Provisional 100.0
KOG1303437 consensus Amino acid transporters [Amino acid tran 100.0
PF01490409 Aa_trans: Transmembrane amino acid transporter pro 100.0
KOG4303524 consensus Vesicular inhibitory amino acid transpor 100.0
KOG1305411 consensus Amino acid transporter protein [Amino ac 100.0
COG0814415 SdaC Amino acid permeases [Amino acid transport an 99.98
PRK10483414 tryptophan permease; Provisional 99.94
PF03222394 Trp_Tyr_perm: Tryptophan/tyrosine permease family; 99.93
PRK09664415 tryptophan permease TnaB; Provisional 99.93
PRK15132403 tyrosine transporter TyrP; Provisional 99.92
TIGR00837381 araaP aromatic amino acid transport protein. aroma 99.91
PRK13629443 threonine/serine transporter TdcC; Provisional 99.85
TIGR00814397 stp serine transporter. The HAAAP family includes 99.77
TIGR00912359 2A0309 spore germination protein (amino acid perme 99.56
PRK10249458 phenylalanine transporter; Provisional 99.51
TIGR01773452 GABAperm gamma-aminobutyrate permease. GabP is hig 99.45
TIGR00909429 2A0306 amino acid transporter. 99.45
PRK15049499 L-asparagine permease; Provisional 99.42
PRK10655438 potE putrescine transporter; Provisional 99.41
PRK10746461 putative transport protein YifK; Provisional 99.41
PRK10238456 aromatic amino acid transporter; Provisional 99.39
PRK11387471 S-methylmethionine transporter; Provisional 99.39
PRK10644445 arginine:agmatin antiporter; Provisional 99.38
PRK11049469 D-alanine/D-serine/glycine permease; Provisional 99.37
TIGR00905473 2A0302 transporter, basic amino acid/polyamine ant 99.35
PRK10580457 proY putative proline-specific permease; Provision 99.34
PRK11021410 putative transporter; Provisional 99.33
TIGR00913478 2A0310 amino acid permease (yeast). 99.32
PRK10836489 lysine transporter; Provisional 99.31
PRK10435435 cadB lysine/cadaverine antiporter; Provisional 99.31
TIGR03810468 arg_ornith_anti arginine/ornithine antiporter. Mem 99.31
PF03845320 Spore_permease: Spore germination protein; InterPr 99.28
PRK10197446 gamma-aminobutyrate transporter; Provisional 99.27
COG1113462 AnsP Gamma-aminobutyrate permease and related perm 99.21
TIGR00930 953 2a30 K-Cl cotransporter. 99.21
TIGR00906557 2A0303 cationic amino acid transport permease. 99.2
TIGR00908442 2A0305 ethanolamine permease. The three genes used 99.16
PF13520426 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3G 99.15
KOG1287479 consensus Amino acid transporters [Amino acid tran 99.09
TIGR00911501 2A0308 L-type amino acid transporter. 99.06
COG0833541 LysP Amino acid transporters [Amino acid transport 98.99
TIGR03428475 ureacarb_perm permease, urea carboxylase system. A 98.97
PRK11357445 frlA putative fructoselysine transporter; Provisio 98.94
COG0531466 PotE Amino acid transporters [Amino acid transport 98.85
PRK15238496 inner membrane transporter YjeM; Provisional 98.8
KOG3832319 consensus Predicted amino acid transporter [Genera 98.78
TIGR00907482 2A0304 amino acid permease (GABA permease). 98.62
PRK11375484 allantoin permease; Provisional 98.62
TIGR00910507 2A0307_GadC glutamate:gamma-aminobutyrate antiport 98.62
COG1457442 CodB Purine-cytosine permease and related proteins 98.59
TIGR03813474 put_Glu_GABA_T putative glutamate/gamma-aminobutyr 98.57
KOG1286554 consensus Amino acid transporters [Amino acid tran 98.49
TIGR00800442 ncs1 NCS1 nucleoside transporter family. The NCS1 98.46
PF00324478 AA_permease: Amino acid permease; InterPro: IPR004 98.42
KOG1289550 consensus Amino acid transporters [Amino acid tran 98.18
TIGR02358386 thia_cytX probable hydroxymethylpyrimidine transpo 98.13
COG3949349 Uncharacterized membrane protein [Function unknown 98.0
COG0591493 PutP Na+/proline symporter [Amino acid transport a 97.84
PRK11017404 codB cytosine permease; Provisional 97.83
TIGR00796378 livcs branched-chain amino acid uptake carrier. tr 97.67
PF00474406 SSF: Sodium:solute symporter family; InterPro: IPR 97.6
TIGR00813407 sss transporter, SSS family. have different number 97.35
COG1953497 FUI1 Cytosine/uracil/thiamine/allantoin permeases 97.34
TIGR02119471 panF sodium/pantothenate symporter. Pantothenate ( 97.25
PF02133440 Transp_cyt_pur: Permease for cytosine/purines, ura 96.9
TIGR02121487 Na_Pro_sym sodium/proline symporter. This family c 96.6
PRK09442483 panF sodium/panthothenate symporter; Provisional 96.49
TIGR00835425 agcS amino acid carrier protein. Members of the AG 96.38
PRK12488549 acetate permease; Provisional 96.34
PF02554376 CstA: Carbon starvation protein CstA; InterPro: IP 96.31
PRK15419502 proline:sodium symporter PutP; Provisional 96.29
PF05525427 Branch_AA_trans: Branched-chain amino acid transpo 96.12
TIGR02711549 symport_actP cation/acetate symporter ActP. Member 95.5
PF01566358 Nramp: Natural resistance-associated macrophage pr 95.4
PRK15015 701 carbon starvation protein A; Provisional 95.17
PRK09395551 actP acetate permease; Provisional 94.24
TIGR03648552 Na_symport_lg probable sodium:solute symporter, VC 94.2
PF01235416 Na_Ala_symp: Sodium:alanine symporter family; Inte 93.94
COG1966575 CstA Carbon starvation protein, predicted membrane 93.0
PRK00701439 manganese transport protein MntH; Reviewed 92.84
COG1914416 MntH Mn2+ and Fe2+ transporters of the NRAMP famil 92.62
PRK10484523 putative transporter; Provisional 90.07
KOG2083 643 consensus Na+/K+ symporter [Inorganic ion transpor 89.9
TIGR01197390 nramp NRAMP (natural resistance-associated macroph 87.16
COG4147529 DhlC Predicted symporter [General function predict 86.63
KOG2082 1075 consensus K+/Cl- cotransporter KCC1 and related tr 86.42
PLN00151 852 potassium transporter; Provisional 85.71
TIGR00796378 livcs branched-chain amino acid uptake carrier. tr 84.0
KOG1288 945 consensus Amino acid transporters [Amino acid tran 83.96
COG0733439 Na+-dependent transporters of the SNF family [Gene 83.72
COG1115452 AlsT Na+/alanine symporter [Amino acid transport a 82.17
>PLN03074 auxin influx permease; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.6e-72  Score=579.73  Aligned_cols=472  Identities=86%  Similarity=1.464  Sum_probs=420.1

Q ss_pred             CCchhhhhHHHhhcccccccCCCCCCCCCcchhhhhhhcccccceeecCccHHHHHHHHHHhHhhhhhcchHHHHHhhch
Q 011392            1 MLPQKQAEEAIVSNFSETEHEGGGKEEGREDEQQQQHSMLSMKSFLWHGGSAWDAWFSCASNQVAQVLLTLPYSFSQMGM   80 (487)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~a~~~l~~~~iG~GiL~LP~af~~~G~   80 (487)
                      |..+++.++...++.+|.|++..++.++++    ..+...++|+..|+++|.++|++|+++..+|.|+|+||+||+++||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~s~~~~~~~l~~~~vG~GILaLP~Af~~~G~   76 (473)
T PLN03074          1 MMAGKQAETAIVGNYVEMEVEGGGEKEEGG----GGGGKSRLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGM   76 (473)
T ss_pred             CCCccccchhHhhccchhccccccccccCC----CCCCceeeeecccCCchHHHHHHHHHHHHHhHHHHhHHHHHHHccH
Confidence            567788888888888777765333333322    2467788999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccCHHHHHHhhhCcchhhHHHHHHHHHHHHHHHHHHHH
Q 011392           81 LSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIA  160 (487)
Q Consensus        81 ~~g~i~l~~~~~ls~~s~~ll~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~G~~~~~~~~~~~~~~~~g~~~~~li~  160 (487)
                      ++|++.++++++++.||++++.+++.++++|++.++.+|++++.+|.|+++..+||+|+.+..+++++++++.++.|++.
T Consensus        77 v~Gii~lv~~~~l~~Yt~~lL~~~~~~~~~r~~~~~~~~~~~~~~~~e~~~~~~G~~~~~~~~~~~~v~l~~~~v~~li~  156 (473)
T PLN03074         77 LSGILFQIFYGLLGSWTAYLISVLYVEYRARKEREKVDFKNHVIQWFEVLDGLLGPYWKNVGLAFNCTFLLFGSVIQLIA  156 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCchhHHHHHHHHHHHHhcChhHHHHHHHHHhhhhHHHHHHHHHH
Confidence            99999999999999999999999988988887767778887777899999999999999999999999999999999999


Q ss_pred             hhhhhhhccccccchhHHHHHHHHHhhhhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccHHHHH
Q 011392          161 CASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGASHTAPTKLVLYF  240 (487)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~ii~~~i~~pl~~l~~l~~l~~~s~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~  240 (487)
                      +++++.++++..+.+.|++++.++.+|++++|++++++++|.+|+.++++.++++++.++.++..++.++..+.++..++
T Consensus       157 ~~~~~~~l~~~~~~~~~~~i~~~v~~~~~~i~sl~~l~~~S~ig~~~tl~~av~i~i~~i~~~~~~~~~~~~~~~~~~~f  236 (473)
T PLN03074        157 CASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYMTIAALSHGQVEGVKHSGPTKLVLYF  236 (473)
T ss_pred             HhhhhhhhCCCcCCCeEEeehHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCchhHHHHH
Confidence            99888888888899999999999999999999999999999999998777666666667666666655554456777888


Q ss_pred             HHHHHHHHHhccccchHHHHhhccCccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCCCCchHHHHHHH
Q 011392          241 TGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTIPSATAVYWSFGDQLLNHSNAFSLLPKNRWRDAAVI  320 (487)
Q Consensus       241 ~~~~~~~faf~~~~~i~~i~~~m~~p~~~~~~~~~a~~~~~~~y~~~g~~gy~~fG~~~~~~~~il~~~~~~~~~~i~~~  320 (487)
                      .++++++|||++|.++|+++++||+|+||+++...++.+++++|+.+|+.||+.|||++.+++++++|+|++.+.+++++
T Consensus       237 ~~~~~i~faf~g~~v~~~I~~~M~~P~~F~~~~~l~~~~v~~~y~~~~~~gY~~fG~~~~~~s~~l~~lp~~~~~~~~~~  316 (473)
T PLN03074        237 TGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLAATLYVLTLTLPSAAAVYWAFGDELLTHSNAFSLLPRSGWRDAAVI  316 (473)
T ss_pred             HHHHHHHHHhcccccHHHHHHhccChhcccchHHHHHHHHHHHHHHHHHeeeeeechhhhhchhHHhcCCCchHHHHHHH
Confidence            99999999999999999999999999999999889999999999999999999999998545678888987767889999


Q ss_pred             HHHHHHHHHHHhhhccHHHHHHHHHccCCCcchhhhhhhhhhHHHHHHHHHHhcCchhhHHHhhhhHHHhHHHHhhhHHH
Q 011392          321 LMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLA  400 (487)
Q Consensus       321 ~~~i~~~~s~pl~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lA~~vP~~~~vl~lvGa~~~~~l~filP~l~  400 (487)
                      ++.++++.+|++++.|+.+.+|+..+.+.++....|+.+|+.++++++++|+.+|+|+++++++||+++++++|++|+++
T Consensus       317 ~~~i~~~~sy~l~~~p~~~~~e~~~~~~~~k~~~~r~~~R~~lv~~~~~iA~~IP~fg~llsLvGs~~~s~l~~i~P~l~  396 (473)
T PLN03074        317 LMLIHQFITFGFACTPLYFVWEKAIGVHDTKSICLRALARLPVVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLA  396 (473)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999887665566778999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhHhhhhhccCCCCCcccchhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccccccccCCCCCC
Q 011392          401 HMLTYRKASARQNAAEKPPFFLPSWTAMYAFNIFVVVWVFVVGFGFGGWASVTNFVRQVDSFGLFAKCYQCKPPPP  476 (487)
Q Consensus       401 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~Gt~~ai~~ii~~~~~~~~~~~~~~c~~~~~  476 (487)
                      |++.++++.+|++..++|++..++|++..++|++++++++++|++.|+|+|+++|+++++++++|++||||.++++
T Consensus       397 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~iiv~~~~~g~~~G~~asi~~ii~~~~~~~~f~~~~~c~~~~~  472 (473)
T PLN03074        397 HMLTYRSASARQNAAEKPPFFLPSWTGMYVVNAFVVVWVLVVGFGFGGWASMTNFVRQIDTFGLFAKCYQCPPPSP  472 (473)
T ss_pred             HHHHhcchhhhhhcccCCcccCCccceehhhhhHHHHhhhhHhhccchHHHHHHHHHhhhhhhhhhhhccCCCCCC
Confidence            9999888777777788888766677778899999998888998889999999999999999999999999987765

>KOG1304 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00206 amino acid transporter; Provisional Back     alignment and domain information
>KOG1303 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PF01490 Aa_trans: Transmembrane amino acid transporter protein; InterPro: IPR013057 This transmembrane region is found in many amino acid transporters including P34579 from SWISSPROT (UNC-47) and P40501 from SWISSPROT (MTR) Back     alignment and domain information
>KOG4303 consensus Vesicular inhibitory amino acid transporter [Amino acid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG1305 consensus Amino acid transporter protein [Amino acid transport and metabolism] Back     alignment and domain information
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10483 tryptophan permease; Provisional Back     alignment and domain information
>PF03222 Trp_Tyr_perm: Tryptophan/tyrosine permease family; InterPro: IPR018227 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>PRK09664 tryptophan permease TnaB; Provisional Back     alignment and domain information
>PRK15132 tyrosine transporter TyrP; Provisional Back     alignment and domain information
>TIGR00837 araaP aromatic amino acid transport protein Back     alignment and domain information
>PRK13629 threonine/serine transporter TdcC; Provisional Back     alignment and domain information
>TIGR00814 stp serine transporter Back     alignment and domain information
>TIGR00912 2A0309 spore germination protein (amino acid permease) Back     alignment and domain information
>PRK10249 phenylalanine transporter; Provisional Back     alignment and domain information
>TIGR01773 GABAperm gamma-aminobutyrate permease Back     alignment and domain information
>TIGR00909 2A0306 amino acid transporter Back     alignment and domain information
>PRK15049 L-asparagine permease; Provisional Back     alignment and domain information
>PRK10655 potE putrescine transporter; Provisional Back     alignment and domain information
>PRK10746 putative transport protein YifK; Provisional Back     alignment and domain information
>PRK10238 aromatic amino acid transporter; Provisional Back     alignment and domain information
>PRK11387 S-methylmethionine transporter; Provisional Back     alignment and domain information
>PRK10644 arginine:agmatin antiporter; Provisional Back     alignment and domain information
>PRK11049 D-alanine/D-serine/glycine permease; Provisional Back     alignment and domain information
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family Back     alignment and domain information
>PRK10580 proY putative proline-specific permease; Provisional Back     alignment and domain information
>PRK11021 putative transporter; Provisional Back     alignment and domain information
>TIGR00913 2A0310 amino acid permease (yeast) Back     alignment and domain information
>PRK10836 lysine transporter; Provisional Back     alignment and domain information
>PRK10435 cadB lysine/cadaverine antiporter; Provisional Back     alignment and domain information
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter Back     alignment and domain information
>PF03845 Spore_permease: Spore germination protein; InterPro: IPR004761 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>PRK10197 gamma-aminobutyrate transporter; Provisional Back     alignment and domain information
>COG1113 AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00930 2a30 K-Cl cotransporter Back     alignment and domain information
>TIGR00906 2A0303 cationic amino acid transport permease Back     alignment and domain information
>TIGR00908 2A0305 ethanolamine permease Back     alignment and domain information
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A Back     alignment and domain information
>KOG1287 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00911 2A0308 L-type amino acid transporter Back     alignment and domain information
>COG0833 LysP Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03428 ureacarb_perm permease, urea carboxylase system Back     alignment and domain information
>PRK11357 frlA putative fructoselysine transporter; Provisional Back     alignment and domain information
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PRK15238 inner membrane transporter YjeM; Provisional Back     alignment and domain information
>KOG3832 consensus Predicted amino acid transporter [General function prediction only] Back     alignment and domain information
>TIGR00907 2A0304 amino acid permease (GABA permease) Back     alignment and domain information
>PRK11375 allantoin permease; Provisional Back     alignment and domain information
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter Back     alignment and domain information
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter Back     alignment and domain information
>KOG1286 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00800 ncs1 NCS1 nucleoside transporter family Back     alignment and domain information
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>KOG1289 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02358 thia_cytX probable hydroxymethylpyrimidine transporter CytX Back     alignment and domain information
>COG3949 Uncharacterized membrane protein [Function unknown] Back     alignment and domain information
>COG0591 PutP Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK11017 codB cytosine permease; Provisional Back     alignment and domain information
>TIGR00796 livcs branched-chain amino acid uptake carrier Back     alignment and domain information
>PF00474 SSF: Sodium:solute symporter family; InterPro: IPR001734 Sodium/substrate symport (or co-transport) is a widespread mechanism of solute transport across cytoplasmic membranes of pro- and eukaryotic cells Back     alignment and domain information
>TIGR00813 sss transporter, SSS family Back     alignment and domain information
>COG1953 FUI1 Cytosine/uracil/thiamine/allantoin permeases [Nucleotide transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>TIGR02119 panF sodium/pantothenate symporter Back     alignment and domain information
>PF02133 Transp_cyt_pur: Permease for cytosine/purines, uracil, thiamine, allantoin; InterPro: IPR001248 The Nucleobase Cation Symporter-1 (NCS1) family consists of bacterial and yeast transporters for nucleobases including purines and pyrimidines Back     alignment and domain information
>TIGR02121 Na_Pro_sym sodium/proline symporter Back     alignment and domain information
>PRK09442 panF sodium/panthothenate symporter; Provisional Back     alignment and domain information
>TIGR00835 agcS amino acid carrier protein Back     alignment and domain information
>PRK12488 acetate permease; Provisional Back     alignment and domain information
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex Back     alignment and domain information
>PRK15419 proline:sodium symporter PutP; Provisional Back     alignment and domain information
>PF05525 Branch_AA_trans: Branched-chain amino acid transport protein; InterPro: IPR004685 Characterised members of the branched chain Amino Acid:Cation Symporter (LIVCS) family transport all three of the branched chain aliphatic amino acids (leucine (L), isoleucine (I) and valine (V)) Back     alignment and domain information
>TIGR02711 symport_actP cation/acetate symporter ActP Back     alignment and domain information
>PF01566 Nramp: Natural resistance-associated macrophage protein; InterPro: IPR001046 The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2 Back     alignment and domain information
>PRK15015 carbon starvation protein A; Provisional Back     alignment and domain information
>PRK09395 actP acetate permease; Provisional Back     alignment and domain information
>TIGR03648 Na_symport_lg probable sodium:solute symporter, VC_2705 subfamily Back     alignment and domain information
>PF01235 Na_Ala_symp: Sodium:alanine symporter family; InterPro: IPR001463 Sodium symporters can be divided by sequence and functional similarity into various groups Back     alignment and domain information
>COG1966 CstA Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms] Back     alignment and domain information
>PRK00701 manganese transport protein MntH; Reviewed Back     alignment and domain information
>COG1914 MntH Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10484 putative transporter; Provisional Back     alignment and domain information
>KOG2083 consensus Na+/K+ symporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01197 nramp NRAMP (natural resistance-associated macrophage protein) metal ion transporters Back     alignment and domain information
>COG4147 DhlC Predicted symporter [General function prediction only] Back     alignment and domain information
>KOG2082 consensus K+/Cl- cotransporter KCC1 and related transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN00151 potassium transporter; Provisional Back     alignment and domain information
>TIGR00796 livcs branched-chain amino acid uptake carrier Back     alignment and domain information
>KOG1288 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>COG0733 Na+-dependent transporters of the SNF family [General function prediction only] Back     alignment and domain information
>COG1115 AlsT Na+/alanine symporter [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query487
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 41.8 bits (97), Expect = 5e-04
 Identities = 36/222 (16%), Positives = 64/222 (28%), Gaps = 93/222 (41%)

Query: 31  DEQQQQHSMLSMKSFLWHGGSAWDAWFSCA----------SNQVAQVLLTLPYSFSQMGM 80
           +  + Q+     K  L     A+   F C           S +    ++    + S    
Sbjct: 10  ETGEHQYQY---KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66

Query: 81  LSGILL-------QIF--------YGFLGSWTAY--------LISVLYVEYRSRKEKENV 117
           L   LL       Q F        Y FL   +          +++ +Y+E R R   +N 
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINYKFL--MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124

Query: 118 SF-KNHV--IQWFE---------------VLDGLLGPYWKAVGLAFNCTFLLFG-SVIQL 158
            F K +V  +Q +                ++DG+LG                 G + + L
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG----------------SGKTWVAL 168

Query: 159 IACAS---------NIYYINDRLDKRTWTYIFGACCATTVFI 191
             C S          I+++N              C +    +
Sbjct: 169 DVCLSYKVQCKMDFKIFWLN-----------LKNCNSPETVL 199

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query487
3l1l_A445 Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC 99.59
3gia_A444 Uncharacterized protein MJ0609; membrane protein, 99.38
4djk_A511 Probable glutamate/gamma-aminobutyrate antiporter; 99.09
2jln_A501 MHP1; hydantoin, transporter, membrane protein, nu 98.66
3dh4_A530 Sodium/glucose cotransporter; membrane protein, sy 97.49
2xq2_A 593 Sodium/glucose cotransporter; transport protein, i 96.64
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A Back     alignment and structure
Probab=99.59  E-value=2.7e-12  Score=132.09  Aligned_cols=238  Identities=9%  Similarity=-0.023  Sum_probs=142.2

Q ss_pred             cCccHHHHHHHHHHhHhhhhhcchHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccCHH
Q 011392           48 HGGSAWDAWFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWF  127 (487)
Q Consensus        48 ~~~s~~~a~~~l~~~~iG~GiL~LP~af~~~G~~~g~i~l~~~~~ls~~s~~ll~~~~~~~~~~~~~~~~~~~~~~~~y~  127 (487)
                      ++.+.++.....+++++|+|++.+|...++.|.. +++..++.++++........+.    .++.+..+        ...
T Consensus         8 r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~-~~~~~li~~~~~~~~a~~~~el----~~~~p~~G--------g~y   74 (445)
T 3l1l_A            8 HKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGI-AIYGWLVTIIGALGLSMVYAKM----SFLDPSPG--------GSY   74 (445)
T ss_dssp             CCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHHHHHHHH----HHHCCCTT--------THH
T ss_pred             CcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHH----HccCCCCC--------Cch
Confidence            3468899999999999999999999999998864 6777777777766655444443    33332222        355


Q ss_pred             HHHHhhhCcchhhHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccchhHHHHHHH-H--HhhhhccCCCcchhHHHHHH
Q 011392          128 EVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGA-C--CATTVFIPSFHNYRIWSFLG  204 (487)
Q Consensus       128 ~l~~~~~G~~~~~~~~~~~~~~~~g~~~~~li~~~~~~~~~~~~~~~~~~~ii~~~-i--~~pl~~l~~l~~l~~~s~~~  204 (487)
                      +..++.+||+...+..+...+........+....++.+....+..+......+... +  ..-..-.+..+...++..+.
T Consensus        75 ~~~~~~~G~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~  154 (445)
T 3l1l_A           75 AYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVA  154 (445)
T ss_dssp             HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGGSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             hhHHhHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccccccHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence            67789999998887766666654444445544444444333222222111111111 1  11112233334444444333


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCC-CCC---CcccHHHHHHHHHHHHHHhccccchHHHHhhccCc-cchhHHHHHHHHH
Q 011392          205 LGMTTYTAWYLTIAAVVHGQVEGA-SHT---APTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKP-QKFKYIYLFATLY  279 (487)
Q Consensus       205 ~~~~~~~~~~~~~~~i~~g~~~~~-~~~---~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~p-~~~~~~~~~a~~~  279 (487)
                      ....+...+.+++..+...+.++. +..   ...++..++.++....|+|.|.........|+||| |+.+|.+..+..+
T Consensus       155 ~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~a~~~~~~~  234 (445)
T 3l1l_A          155 TVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLI  234 (445)
T ss_dssp             HHHHHHHHHHHHHTTSTTCCCCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhChhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccHHHHHHHHH
Confidence            332222111222222222121111 111   11234567888999999999999999999999999 6689999999999


Q ss_pred             HHHHHHHHHHHHHHhhccc
Q 011392          280 VFTLTIPSATAVYWSFGDQ  298 (487)
Q Consensus       280 ~~~~y~~~g~~gy~~fG~~  298 (487)
                      +.++|+...+......+.+
T Consensus       235 ~~~~y~~~~~~~~~~~~~~  253 (445)
T 3l1l_A          235 AAVCYVLSTTAIMGMIPNA  253 (445)
T ss_dssp             HHHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHhcCCHH
Confidence            9999999888777666654
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C Back     alignment and structure
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A Back     alignment and structure
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A Back     alignment and structure
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus} Back     alignment and structure
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00