Citrus Sinensis ID: 011502

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480----
Protein Sequence
MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPSADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSRETCGVRIENARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCFAYFEHDSS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccEEEEEcccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccHHHHHcccccccccHHHHHHHHHHHHHHccccEEEEEEEcccc
Coil and Loop (DISEMBL)
markgnqqkngvdrhtsshrkkgsnsgsavpdmagqgrdgkvkvfpgdelpngshsgipsadsssddhhagdesirknnaeasprrekqgtdtrrdlgqsvssetsetiagdstdnissretcgvrienarrgrkhrktglgwslNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKvnqhktdsspeqtsgmqagpsfsngepvhpafsdnvpglsadrspgvpstsgddsemtseDEVVRLLNCTDhysalglsrfenvdVSILKREYrkkvcclnhfccfayfehdss
Flexible Loop (DISEMBL)
markgnqqkngvdrhtsshrkkgsnsgsavpdmagqgRDGKVKVFPGDELPNGSHSGIPSADSSSDDHHAGDesirknnaeasprrekqgtdtrrdlgqsvssetsetiagdstdnissretcgvrienarrgrkhrktglgwslnrvhLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVpstsgddsemtsEDEVVRLLNCTDHysalglsrfenvDVSILKREYRKKVCCLNHFCCFAYFEHDSS
Low Complexity Region (SEG)
MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPsadsssddhhagdESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSRETCGVRIENARRGRKHRKTGLGWSLNRVHLKNMMEkvklsvnvvvrslrvyvvPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKflmvlvvaalvaffigfalalvvvalSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWlglllalnlSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCFAYFEHDSS
Disordered region (IsUnstruct)
*****************************************************************************************************************************************KTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKS***************************************************************VVRLLNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCFAYFE****
Disordered Region (DISOPRED)
*********************************************************************************************************************************************************MEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLK****************************************************************VVRLLNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCFAYFEH***
Disordered Region (DISEMBL)
***********************************QGRDGKVKVFPGDELPNGSHS******************IRKN************************************DNISSRETCGVRIENARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKV*****************GPSFSNGEPVHPAFSDNVPGLS********************DEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCFAYFEHDSS
Disordered Region (DISPRO)
*********************************************************************************************************************************************GWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSK**********************************************************SEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCFAYFE****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPSADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSRETCGVRIENARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCFAYFEHDSS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	484
255556474	741	conserved hypothetical protein [Ricinus	0.954	0.623	0.578	1e-155
296083212	749	unnamed protein product [Vitis vinifera]	0.958	0.619	0.548	1e-144
356529091	743	PREDICTED: uncharacterized protein LOC10	0.942	0.613	0.508	1e-126
356555977	744	PREDICTED: dnaJ homolog subfamily C memb	0.942	0.612	0.505	1e-124
357448821	727	Chaperone protein dnaJ [Medicago truncat	0.923	0.614	0.491	1e-120
225432039	592	PREDICTED: uncharacterized protein LOC10	0.646	0.528	0.634	1e-115
449462182	730	PREDICTED: uncharacterized protein LOC10	0.944	0.626	0.487	1e-111
15240510	695	chaperone DnaJ-domain containing protein	0.876	0.610	0.436	1e-103
224112018	579	predicted protein [Populus trichocarpa]	0.628	0.525	0.616	7e-96
449511895	585	PREDICTED: uncharacterized LOC101205292	0.648	0.536	0.564	2e-91

>gi|255556474|ref|XP_002519271.1| conserved hypothetical protein [Ricinus communis] gi|223541586|gb|EEF43135.1| conserved hypothetical protein [Ricinus communis]

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 275/475 (57%), Positives = 347/475 (73%), Gaps = 13/475 (2%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKGNQQ+NGVDRH S+H+KK ++SG  VPD   +G+  +VKVFPG+E+PNG+    PS
Sbjct: 1   MARKGNQQRNGVDRHASNHKKKVTDSGHVVPDTITRGKVSEVKVFPGEEIPNGNQPSSPS 60

Query: 61  ADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSR 120
            D+    + AGD++  K N+    R++K+  D  RDLG + SS+ +   +GDS  N    
Sbjct: 61  VDNLRRTYTAGDDNKSKQNSGKLQRKDKKWIDQVRDLGDNASSKNN---SGDS--NSPFV 115

Query: 121 ETCGVRIENA-----RRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPT 175
           ET G+R EN        G K  + G+ +  N +H++N+ME ++LS NV VR+LR   + T
Sbjct: 116 ETPGIRQENGALPGCESGLKRVRNGVNYLFNGLHIRNVMENMELSGNVAVRNLRTLALST 175

Query: 176 LKAAIELLERQSPMLM---TNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLD 232
           LKAA   LER  P+ +   +N+YNA DYV+ KV+Q YPV    L     IMLLLSM+WLD
Sbjct: 176 LKAAGVWLERHRPLFVRVTSNLYNARDYVNMKVEQAYPVVSKWLIQLGNIMLLLSMVWLD 235

Query: 233 CTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVV 292
            T+RGIDSF+R+GTTSFFSVIWCSI+SV+AMVG FKFL+VL +AA V   IG  L L+VV
Sbjct: 236 FTLRGIDSFLRLGTTSFFSVIWCSIMSVLAMVGTFKFLIVLAIAACVGVIIGLTLGLLVV 295

Query: 293 ALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLA 352
           A SG + LWLYGSFWTT FVI +GGLAF  +HER+AL ITT+YSIYCAW YVGWLGLLLA
Sbjct: 296 AFSGIVFLWLYGSFWTTMFVIIIGGLAFVLSHERVALLITTVYSIYCAWIYVGWLGLLLA 355

Query: 353 LNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSAD 412
            NLSF+SSD LI+FLK+ +NQ +  +  EQ +G+   P F NGE  HP+F++  PGLS+D
Sbjct: 356 FNLSFLSSDILIYFLKNTINQRRRSNPTEQAAGVDGQPGFFNGESFHPSFTETGPGLSSD 415

Query: 413 RSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKV 467
           RSPGVPSTSG DSE+TSE+EV+RLLNCTDHYS LGLSR+ENVDVS+LKREYRKK 
Sbjct: 416 RSPGVPSTSGADSELTSEEEVIRLLNCTDHYSVLGLSRYENVDVSVLKREYRKKA 470

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296083212|emb|CBI22848.3| unnamed protein product [Vitis vinifera]

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/476 (54%), Positives = 333/476 (69%), Gaps = 12/476 (2%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKGNQQKNG+DRH+S+H++K S+SG  VPD   + + G+VK+  G+ELPNG+ +  P 
Sbjct: 1   MARKGNQQKNGLDRHSSNHKRKVSDSGRGVPDTKERVQTGEVKIVAGEELPNGNQASNPL 60

Query: 61  ADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSR 120
            ++++    AGDE   K  +  S R+EKQ  DT   L  SV   ++    G+   N    
Sbjct: 61  TETANKTSSAGDEKKSKQRSGKSLRKEKQEMDTTHGLDHSVPPGSN---PGECAGNQFMT 117

Query: 121 ETCGVRIENA-----RRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPT 175
           E   +R EN        G KH     G S N +  +  M+  + S  +VVRSLR   +  
Sbjct: 118 EAFSIREENGTSPRTNNGSKHPSGSSGCSPNGLPSEKAMKNSEFSDTMVVRSLRASALSI 177

Query: 176 LKAAIELLERQSPMLMT---NIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLD 232
           LKAA E LERQ P  ++    I NA D +  K++Q YP+ L  L +F  IMLLLSM+WLD
Sbjct: 178 LKAANEWLERQKPFFISLNIRILNARDCIRMKIEQTYPIILKWLMYFGNIMLLLSMVWLD 237

Query: 233 CTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVV 292
           CTIRGIDSF+RMGTTSFFSVIWCSI SV+AM+GM KFL++L+V+ L+  F+GF LA +V+
Sbjct: 238 CTIRGIDSFLRMGTTSFFSVIWCSIFSVVAMIGMSKFLIILIVSVLMGVFLGFTLASLVI 297

Query: 293 ALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLA 352
           A+SG ++LW+YGSFWTT  +IF GGLAF  +HER AL ITT+YS+YCAWTYVGWLGL++A
Sbjct: 298 AISGVVILWIYGSFWTTALIIFCGGLAFTLSHERAALLITTIYSVYCAWTYVGWLGLIVA 357

Query: 353 LNLSFVSSDALIFFLKSKVNQHKTDS-SPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSA 411
           LNLSF+SSDALI+ LK+  N+H+  S  PEQT+GM+  P F NGE  H +FS+     + 
Sbjct: 358 LNLSFISSDALIYLLKNTTNEHRRSSRPPEQTAGMRGRPGFFNGEQPHASFSETGSEQAP 417

Query: 412 DRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKV 467
           DRS GV STSG DSE+TSE+EVVRLLNCTDHYSALGLSRFEN+DVS+LKREYRKK 
Sbjct: 418 DRSAGVTSTSGADSEITSEEEVVRLLNCTDHYSALGLSRFENIDVSLLKREYRKKA 473

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529091|ref|XP_003533130.1| PREDICTED: uncharacterized protein LOC100812282 [Glycine max]

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/476 (50%), Positives = 319/476 (67%), Gaps = 20/476 (4%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKGNQQKNGVDRH  +++K    SG  +P M   G+ G VKVF  +EL   +  G+  
Sbjct: 1   MARKGNQQKNGVDRHGLNNKK--GVSGGMLPGMKDLGKGGPVKVFLREELAETNCIGV-- 56

Query: 61  ADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTD-NISS 119
           + ++ D   +GDE   +  +    R+EKQG   + DL      E S    G+S D +++S
Sbjct: 57  SQTACDASSSGDECNNEQRSVKVSRKEKQGMAGKHDL------EESSFFEGNSGDGSLNS 110

Query: 120 RETCGVRIEN-----ARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVP 174
                ++ EN     + +G++  K+ L   L+ +HLK+++EKV+L+ NV++R LR+ V  
Sbjct: 111 EAEASIQEENGTLPRSNQGQQSIKSRLSCILDSLHLKSVVEKVELADNVIIRRLRLLVFS 170

Query: 175 TLKAAIELLERQSPM---LMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWL 231
              A  E L RQ+P+   L T ++ A   V  K    YP+ L  L HF  IMLLLS+ WL
Sbjct: 171 IFTAVSEWLTRQTPLFVSLRTIVFEACHNVRTKFVLAYPIVLKCLMHFGNIMLLLSVFWL 230

Query: 232 DCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVV 291
           DC +RG+DSF+RMGTTSFFSVIWCSI SVI+M+GM KFL VL +AAL+  F+G  LA++V
Sbjct: 231 DCALRGVDSFIRMGTTSFFSVIWCSIFSVISMIGMLKFLAVLGLAALIGCFLGLMLAILV 290

Query: 292 VALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLL 351
           VA+ G I LW YGSFWTT F I LGGL F  +HER+AL ITT+YS+YCA  Y GWLGLLL
Sbjct: 291 VAIIGVITLWFYGSFWTTAFFIILGGLTFMLSHERVALLITTVYSVYCARLYAGWLGLLL 350

Query: 352 ALNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSA 411
           A NL+F+SSD LI+FLK  + Q    +  EQ +GM   P FS+ EP H + S+N  G SA
Sbjct: 351 AFNLAFISSDVLIYFLKKNIEQQSRSNPFEQRAGMHGQPGFSD-EPTHASSSENGQGPSA 409

Query: 412 DRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKV 467
           DR+ G+PSTSG DS++TSEDEVVRLLNC+DHY+ALG +R++N+DVSILKREYRKK 
Sbjct: 410 DRNAGIPSTSGVDSDLTSEDEVVRLLNCSDHYAALGFTRYQNIDVSILKREYRKKA 465

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555977|ref|XP_003546304.1| PREDICTED: dnaJ homolog subfamily C member 14-like [Glycine max]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/475 (50%), Positives = 319/475 (67%), Gaps = 19/475 (4%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKG QQKNGVDRH  +++K    SG  +P M G G+ G VKVFP + L      G+  
Sbjct: 1   MARKGTQQKNGVDRHGLNNKK--GVSGGVLPGMKGHGKGGPVKVFPREGLAETDSIGV-- 56

Query: 61  ADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSR 120
           + ++ D   +GD+   +  +E    +EKQG   + DL     S + E+ +GD +  ++S 
Sbjct: 57  SQTACDGRSSGDDYNNEQRSEKISGKEKQGMAGKHDL---EESSSFESNSGDGS--LNSE 111

Query: 121 ETCGVRIEN-----ARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPT 175
               ++ EN     + +G++  K+ L   L+ + LK+++EKV+L+ NV++R LR+ V   
Sbjct: 112 AEASIQEENGTLPRSNQGQQSIKSRLSCILDSLLLKSVVEKVELADNVIIRRLRLSVFSI 171

Query: 176 LKAAIELLERQSPM---LMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLD 232
             AA E L R +P+   L T ++   + V  KV Q YPV L  L H   IMLLL + WLD
Sbjct: 172 FTAASEWLNRHTPLFVSLRTIMFETCNTVRTKVVQAYPVVLKWLMHLGNIMLLLLVFWLD 231

Query: 233 CTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVV 292
           C +RG+DSF+RMGTTSFFSVIWCSI SVI+M+GM KFL VL +AAL+ FF+G  LA++VV
Sbjct: 232 CALRGVDSFVRMGTTSFFSVIWCSIFSVISMIGMLKFLAVLGLAALIGFFLGLMLAILVV 291

Query: 293 ALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLA 352
           A+ G + LW YGSFWTT F I LGGLAF   HER+AL ITT+YS+YCAW YVGWLGLLLA
Sbjct: 292 AIIGVVTLWFYGSFWTTAFFIILGGLAFMLRHERVALLITTVYSVYCAWLYVGWLGLLLA 351

Query: 353 LNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSAD 412
            N++F+SSD LI+FLK  + Q    +  E  +GM   P FS+ EP H + S+N  G SAD
Sbjct: 352 FNITFISSDVLIYFLKKNIEQQSRSNPFEHRAGMHE-PGFSD-EPTHASSSENGQGPSAD 409

Query: 413 RSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKV 467
           R+ G+PSTSG DS++TSEDEVVRLLNC+DHY+ALG  R++N+DVSILKREYRKK 
Sbjct: 410 RNAGIPSTSGVDSDVTSEDEVVRLLNCSDHYAALGFMRYQNIDVSILKREYRKKA 464

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357448821|ref|XP_003594686.1| Chaperone protein dnaJ [Medicago truncatula] gi|124361108|gb|ABN09080.1| Heat shock protein DnaJ [Medicago truncatula] gi|355483734|gb|AES64937.1| Chaperone protein dnaJ [Medicago truncatula]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 231/470 (49%), Positives = 312/470 (66%), Gaps = 23/470 (4%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKGNQQKNG++     HRK GS  G  +P M G    G+VKVFP +EL NG H G+  
Sbjct: 1   MARKGNQQKNGIN-----HRKGGS--GGVLPGMKGH-EGGQVKVFPAEELANGGH-GV-- 49

Query: 61  ADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSR 120
           +  + +   AGD++  +  +E   R++K       DL +S SS  S +  G+    +  +
Sbjct: 50  SQKACEGCSAGDDNNNERKSERFSRKDKH------DLEES-SSFGSNSENGNENVEVPKQ 102

Query: 121 ETCGVRIENARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAI 180
                R  N  + ++  K+ L   +  + L+ ++E  +L+ +  +R LR+ V+    A  
Sbjct: 103 GHRNFRRRN--QTQQSIKSRLSHLVEGLQLRVLVENSELADHPAIRRLRLSVLSIFTAVT 160

Query: 181 ELLERQSPM---LMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRG 237
           E L RQ P+   + T +  A+     K +Q YP+ L  L HF  I+LLLS+ WLDC +RG
Sbjct: 161 EWLIRQKPLFASIRTTVLEAYANFRTKFKQAYPIVLTWLMHFGSIILLLSVFWLDCAVRG 220

Query: 238 IDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGT 297
            DSF+RMGTTSFFSVIWCSI SVI+M+GM KFL+VL +AAL+ FF+GF +A +VVA+ G 
Sbjct: 221 FDSFVRMGTTSFFSVIWCSIFSVISMIGMLKFLVVLGLAALIGFFVGFVIAALVVAIIGV 280

Query: 298 ILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSF 357
           ++LW YGSFWTT F+I LGGLAF   HER+AL ITT+YS+YCAW YVGWL L LA NL+F
Sbjct: 281 VMLWFYGSFWTTAFIIILGGLAFMLRHERVALLITTVYSVYCAWLYVGWLRLFLAFNLAF 340

Query: 358 VSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGV 417
           +SSD LI+FLK  ++Q    +  EQ +GM + P F N E +  + S+N PG SADR+ GV
Sbjct: 341 ISSDVLIYFLKKNIDQQSRSNPFEQRAGMNSQPGFGNDESIPSSSSENGPGPSADRNAGV 400

Query: 418 PSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKV 467
           PSTSG DS++TSEDEVVRLL+C DHYSALGL+R++++DVS+LKREYRKK 
Sbjct: 401 PSTSGADSDVTSEDEVVRLLHCFDHYSALGLTRYQDIDVSVLKREYRKKA 450

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432039|ref|XP_002280185.1| PREDICTED: uncharacterized protein LOC100246610 [Vitis vinifera]

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 201/317 (63%), Positives = 248/317 (78%), Gaps = 4/317 (1%)

Query: 154 MEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMT---NIYNAHDYVSRKVQQVYP 210
           M+  + S  +VVRSLR   +  LKAA E LERQ P  ++    I NA D +  K++Q YP
Sbjct: 1   MKNSEFSDTMVVRSLRASALSILKAANEWLERQKPFFISLNIRILNARDCIRMKIEQTYP 60

Query: 211 VALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFL 270
           + L  L +F  IMLLLSM+WLDCTIRGIDSF+RMGTTSFFSVIWCSI SV+AM+GM KFL
Sbjct: 61  IILKWLMYFGNIMLLLSMVWLDCTIRGIDSFLRMGTTSFFSVIWCSIFSVVAMIGMSKFL 120

Query: 271 MVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALF 330
           ++L+V+ L+  F+GF LA +V+A+SG ++LW+YGSFWTT  +IF GGLAF  +HER AL 
Sbjct: 121 IILIVSVLMGVFLGFTLASLVIAISGVVILWIYGSFWTTALIIFCGGLAFTLSHERAALL 180

Query: 331 ITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKVNQHKTDS-SPEQTSGMQAG 389
           ITT+YS+YCAWTYVGWLGL++ALNLSF+SSDALI+ LK+  N+H+  S  PEQT+GM+  
Sbjct: 181 ITTIYSVYCAWTYVGWLGLIVALNLSFISSDALIYLLKNTTNEHRRSSRPPEQTAGMRGR 240

Query: 390 PSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLS 449
           P F NGE  H +FS+     + DRS GV STSG DSE+TSE+EVVRLLNCTDHYSALGLS
Sbjct: 241 PGFFNGEQPHASFSETGSEQAPDRSAGVTSTSGADSEITSEEEVVRLLNCTDHYSALGLS 300

Query: 450 RFENVDVSILKREYRKK 466
           RFEN+DVS+LKREYRKK
Sbjct: 301 RFENIDVSLLKREYRKK 317

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462182|ref|XP_004148820.1| PREDICTED: uncharacterized protein LOC101205292 [Cucumis sativus]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/474 (48%), Positives = 317/474 (66%), Gaps = 17/474 (3%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKGNQQK G +RH S+ +KKGS+  S      GQGR  ++KVFPG+ELPN +    P 
Sbjct: 1   MARKGNQQKTGSERHASNSKKKGSDLQSK-----GQGRAREIKVFPGEELPNDNQHSRPF 55

Query: 61  ADSS-SDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQ-SVSSETSETIAGDSTDNIS 118
            +   S D   G ++++K  +  S R+EKQG +      + +  SE SE   G++  +  
Sbjct: 56  EEGMMSSDSGEGLKNLKK--SAKSLRKEKQGIEGLHGPEEPNFPSEESENCDGNNGGSSV 113

Query: 119 SRETCGVRIENARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKA 178
             +  G    +  + +        + LN  H++++M  +  S NV+V+S    +    +A
Sbjct: 114 GEQYKG---SSGDKDQVQVDGSFSFFLNGEHIRSVMANLNFSDNVLVKSSVESMSSIFEA 170

Query: 179 AIELLERQSPMLMTNIYN---AHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTI 235
           +   LE+  P+L +   N     DYV +K+   YP+ L  + HF  I+LL S++WLDC +
Sbjct: 171 SHVFLEQHRPLLNSLKNNLLNTSDYVVKKIMTAYPIVLKWMMHFGNIILLFSIVWLDCAL 230

Query: 236 RGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALS 295
           RGIDSF+RMGTTSFF+VIW SILS IAMVG  KFL+VLV AA +  F+GFA A++V+A+S
Sbjct: 231 RGIDSFIRMGTTSFFAVIWFSILSTIAMVGFLKFLVVLVAAASLGIFVGFAFAILVIAIS 290

Query: 296 GTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNL 355
           G   LW YG+FW T  +IFLGGLAF  +HER+AL ITT+YS+YCAW   GWLGLLL LNL
Sbjct: 291 GAAFLWFYGNFWMTMLIIFLGGLAFILSHERVALSITTLYSVYCAWVCTGWLGLLLGLNL 350

Query: 356 SFVSSDALIFFLKSKVNQH-KTDSSPEQTSGMQAGPSFSNGEPVHPAFSD-NVPGLSADR 413
           SF+SSDALI+ LK+ +N+H +++  PEQT+GMQ   SFS+ +P+  + S+ +  G +ADR
Sbjct: 351 SFISSDALIYVLKNNMNEHRRSNRYPEQTTGMQDQSSFSHDDPMQTSSSEFSGTGFAADR 410

Query: 414 SPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKV 467
            PG PSTSG DSE++SEDEVVRLLNC+DHY+ALGLSR+EN+D S+LK+EYRKK 
Sbjct: 411 CPGTPSTSGADSEISSEDEVVRLLNCSDHYAALGLSRYENIDTSLLKKEYRKKA 464

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240510|ref|NP_199769.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] gi|10177624|dbj|BAB10771.1| unnamed protein product [Arabidopsis thaliana] gi|332008449|gb|AED95832.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana]

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 208/477 (43%), Positives = 286/477 (59%), Gaps = 53/477 (11%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKG+ QKNG+D  T   +K  S+S   +    GQG++            N + S +  
Sbjct: 1   MARKGSHQKNGMDNQTKQKKKTASDS---LLSNKGQGKN------------NEAESVL-- 43

Query: 61  ADSSSDDHHAGD----ESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDN 116
            ++  DD         E++ ++  EA      +G  + +D+ QSV+SE+   +AG S   
Sbjct: 44  KENCQDDKQTKSSPVCETLERDMDEA------KGAASLKDIDQSVASESD--LAGGS--- 92

Query: 117 ISSRETCGVRIENARR---GRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVV 173
              R   G   E  R    GR+H  + +   L+ +   +  E ++L+ N V+R LR+   
Sbjct: 93  -RPRNEPGFTTEETRYIPFGREHIDSVMRSLLDILSTNSPSENIELAYNAVLRKLRISTA 151

Query: 174 PTLKAAIELLERQSPMLMT---NIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLW 230
              +   + +ER  P++ +    +Y   D V  K++QV+PV    L HF  I+LLLS++W
Sbjct: 152 TVSREMTKCMERHRPLIDSVKLRVYKGRDLVLTKMRQVFPVVFRWLMHFGSIILLLSLVW 211

Query: 231 LDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALV 290
           LDC IRG DSF+RMGT SFFS++WC + S  +M GM KF+++ V   LVA FIGF +  V
Sbjct: 212 LDCAIRGFDSFIRMGTASFFSIMWCGLFSAFSMFGMTKFILISVATVLVALFIGFVVGSV 271

Query: 291 VVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLL 350
            +A+SG +LLWLYGSFWTT   +F GGLAF   HER+ALFI T+YS+Y A +YVGWLGLL
Sbjct: 272 TLAISGLVLLWLYGSFWTTLLFLFFGGLAFMMKHERVALFIITVYSVYSALSYVGWLGLL 331

Query: 351 LALNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLS 410
           LA NL+F+S+DALI+F K+K+NQ  T   P               EPV+ +  +N PG  
Sbjct: 332 LAFNLAFISTDALIYFFKNKINQQSTADRPT--------------EPVNDSSFENGPGFP 377

Query: 411 ADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKV 467
            DR PGV STSG DSE+TSEDE+ RLLNC DHYSALGL+R+ NVD++ LKREYRKK 
Sbjct: 378 GDRGPGVASTSGTDSELTSEDEIARLLNCPDHYSALGLARYGNVDMAYLKREYRKKA 434

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112018|ref|XP_002316054.1| predicted protein [Populus trichocarpa] gi|222865094|gb|EEF02225.1| predicted protein [Populus trichocarpa]

 Score =  357 bits (916), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 190/308 (61%), Positives = 231/308 (75%), Gaps = 4/308 (1%)

Query: 163 VVVRSLRVYVVPTLKAAIELLERQ-SPM--LMTNIYNAHDYVSRKVQQVYPVALNHLGHF 219
           +VV +LR   +  LK A E LERQ  P   L TNIY + DYV  KV + YPV L  L  F
Sbjct: 1   MVVGNLRASALSMLKVAGEWLERQEQPFVSLKTNIYASRDYVKMKVAKAYPVVLKWLLQF 60

Query: 220 AKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALV 279
             I+LLLSM+WLDCT+RG+DSF+R+GTTSFFSVIWCSILSVIAMVG+ K L++L +AA V
Sbjct: 61  GNIVLLLSMVWLDCTLRGMDSFLRLGTTSFFSVIWCSILSVIAMVGISKILIILAIAAFV 120

Query: 280 AFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYC 339
             FIG  L L++VA+SG + LW YGSFWTT FVI + G +F    ERL L I T+YS YC
Sbjct: 121 GVFIGLILGLLIVAISGLVFLWFYGSFWTTVFVIIISGNSFSPFQERLTLLIITIYSTYC 180

Query: 340 AWTYVGWLGLLLALNLSFVSSDALIFFLKSKVN-QHKTDSSPEQTSGMQAGPSFSNGEPV 398
            W+Y GWLGLLLALNLSF+SSD LI+ LK+ +N Q ++  + E ++GM+  P F N +  
Sbjct: 181 VWSYAGWLGLLLALNLSFISSDILIYILKNNINRQRRSGRTSEHSAGMEGRPGFFNEDSF 240

Query: 399 HPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSI 458
           H +  +  PG SADRSPGVPSTSG DSE+TSE+EVVRLLNCTDHYSALGLSR+EN+DVS+
Sbjct: 241 HASSFETGPGFSADRSPGVPSTSGADSELTSEEEVVRLLNCTDHYSALGLSRYENMDVSV 300

Query: 459 LKREYRKK 466
           LKREYRKK
Sbjct: 301 LKREYRKK 308

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449511895|ref|XP_004164082.1| PREDICTED: uncharacterized LOC101205292 [Cucumis sativus]

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 180/319 (56%), Positives = 236/319 (73%), Gaps = 5/319 (1%)

Query: 154 MEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYN---AHDYVSRKVQQVYP 210
           M  +  S NV+V+S    +    +A+   LE+  P+L +   N     DYV +K+   YP
Sbjct: 1   MANLNFSDNVLVKSSVESMSSIFEASHVFLEQHRPLLNSLKNNLLNTSDYVVKKIMTAYP 60

Query: 211 VALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFL 270
           + L  + HF  I+LL S++WLDC +RGIDSF+RMGTTSFF+VIW SILS IAMVG  KFL
Sbjct: 61  IVLKWMMHFGNIILLFSIVWLDCALRGIDSFIRMGTTSFFAVIWFSILSTIAMVGFLKFL 120

Query: 271 MVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALF 330
           +VLV AA +  F+GFA A++V+A+SG   LW YG+FW T  +IFLGGLAF  +HER+AL 
Sbjct: 121 VVLVAAASLGIFVGFAFAILVIAISGAAFLWFYGNFWMTMLIIFLGGLAFILSHERVALS 180

Query: 331 ITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKVNQH-KTDSSPEQTSGMQAG 389
           ITT+YS+YCAW   GWLGLLL LNLSF+SSDALI+ LK+ +N+H +++  PEQT+GMQ  
Sbjct: 181 ITTLYSVYCAWVCTGWLGLLLGLNLSFISSDALIYVLKNNMNEHRRSNRYPEQTTGMQDQ 240

Query: 390 PSFSNGEPVHPAFSD-NVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGL 448
            SFS+ +P+  + S+ +  G +ADR PG PSTSG DSE++SEDEVVRLLNC+DHY+ALGL
Sbjct: 241 SSFSHDDPMQTSSSEFSGTGFAADRCPGTPSTSGADSEISSEDEVVRLLNCSDHYAALGL 300

Query: 449 SRFENVDVSILKREYRKKV 467
           SR+EN+D S+LK+EYRKK 
Sbjct: 301 SRYENIDTSLLKKEYRKKA 319

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	484
TAIR|locus:2157804	695	AT5G49580 [Arabidopsis thalian	0.743	0.517	0.414	4.1e-79

TAIR|locus:2157804 AT5G49580 [Arabidopsis thaliana (taxid:3702)]

 Score = 736 (264.1 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
 Identities = 160/386 (41%), Positives = 212/386 (54%)

Query:    87 EKQGTDTRRDLGQSVSSETSETIAGDSTDNISSRETCGVRIENARR---GRKHRKTGLGW 143
             E +G  + +D+ QSV+SE+   +AG S      R   G   E  R    GR+H  + +  
Sbjct:    68 EAKGAASLKDIDQSVASESD--LAGGSRP----RNEPGFTTEETRYIPFGREHIDSVMRS 121

Query:   144 SLNRVHLKNMMEXXXXXXXXXXXXXXXXXXPTLKAAIELLERQSPMLMT---NIYNAHDY 200
              L+ +   +  E                     +   + +ER  P++ +    +Y   D 
Sbjct:   122 LLDILSTNSPSENIELAYNAVLRKLRISTATVSREMTKCMERHRPLIDSVKLRVYKGRDL 181

Query:   201 VSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSV 260
             V  K++QV+PV    L HF  I+LLLS++WLDC IRG DSF+RMGT SFFS++WC + S 
Sbjct:   182 VLTKMRQVFPVVFRWLMHFGSIILLLSLVWLDCAIRGFDSFIRMGTASFFSIMWCGLFSA 241

Query:   261 IAMVGMFKXXXXXXXXXXXXXXXXXXXXXXXXXXSGTILLWLYGSFWTTFFVIFLGGLAF 320
              +M GM K                          SG +LLWLYGSFWTT   +F GGLAF
Sbjct:   242 FSMFGMTKFILISVATVLVALFIGFVVGSVTLAISGLVLLWLYGSFWTTLLFLFFGGLAF 301

Query:   321 KFTHERLALFITTMYSIYCAWTYVGWXXXXXXXXXSFVSSDALIFFLKSKVNQHKTDSSP 380
                HER+ALFI T+YS+Y A +YVGW         +F+S+DALI+F K+K+NQ  T   P
Sbjct:   302 MMKHERVALFIITVYSVYSALSYVGWLGLLLAFNLAFISTDALIYFFKNKINQQSTADRP 361

Query:   381 EQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCT 440
                            EPV+ +  +N PG   DR PGV STSG DSE+TSEDE+ RLLNC 
Sbjct:   362 T--------------EPVNDSSFENGPGFPGDRGPGVASTSGTDSELTSEDEIARLLNCP 407

Query:   441 DHYSALGLSRFENVDVSILKREYRKK 466
             DHYSALGL+R+ NVD++ LKREYRKK
Sbjct:   408 DHYSALGLARYGNVDMAYLKREYRKK 433

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.6.1.27	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00033182001 SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (747 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	484
pfam07698	189	pfam07698, 7TM-7TMR_HD, 7TM receptor with intracel	9e-04
COG0658	453	COG0658, ComEC, Predicted membrane metal-binding p	0.003
cd00919	463	cd00919, Heme_Cu_Oxidase_I, Heme-copper oxidase su	0.003
pfam01148	259	pfam01148, CTP_transf_1, Cytidylyltransferase fami	0.003

>gnl|CDD|219524 pfam07698, 7TM-7TMR_HD, 7TM receptor with intracellular HD hydrolase

 Score = 40.2 bits (95), Expect = 9e-04
 Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 15/158 (9%)

Query: 216 LGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVV 275
           LG F  ++LLL +L L       +   R       S+I    L +  ++ +     ++ +
Sbjct: 5   LGLFLLVLLLLGVLLLYLRRFRPELRKRNKKLLLLSLILILSLLLAKLISLISIPYLVPL 64

Query: 276 AA---LVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVI-FLGGLAFKFTHERLALFI 331
           AA   L+A  +G  LALVV  L   +LL L       F +   LGGL         AL +
Sbjct: 65  AAAPMLLAILLGSRLALVVSVL-LALLLGLMFGNNLEFLLYALLGGLV-------GALSV 116

Query: 332 TTMYS---IYCAWTYVGWLGLLLALNLSFVSSDALIFF 366
             + S   +  A   V  + +LL L L  +   +  + 
Sbjct: 117 RRLRSRSQLLQAGLLVALVNVLLYLALGLIQGGSFSWL 154

These bacterial 7TM receptor proteins have an intracellular pfam01966. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain. Length = 189

>gnl|CDD|223731 COG0658, ComEC, Predicted membrane metal-binding protein [General function prediction only]

 Score = 39.8 bits (93), Expect = 0.003
 Identities = 33/164 (20%), Positives = 52/164 (31%), Gaps = 18/164 (10%)

Query: 218 HFAKIMLLLSMLWLDCTI-RGIDSFMRMGTTSFFSVIWCSIL-SVIAMVGMFKFLMVLVV 275
           H A +      L        G    + +G  + F  I      SV+  + M   L +L  
Sbjct: 248 HVALLAGTFLFLLRRLGRWIGPALPLLLGLLALFYAILTGFSPSVLRALVM-LALALLAS 306

Query: 276 AALVAFFIGFALALVVVALSGTILLWLYG-SFWTTFFVIF--LGGLAFKFTHERLALFIT 332
            +L      F L L  +A+     L +    FW +F  +   +                 
Sbjct: 307 LSLRNLSSIFILLLSAIAILLLAPLAILSLGFWLSFLAVAALILWSQLFRLLGLSWPLPI 366

Query: 333 TMYSIYCAWT---------YVGWLGLLLALNLSFVSSDALIFFL 367
           T   +    T          +G LGLLL L +S + S   +  L
Sbjct: 367 T---LALLATLPLLILQFGRLGLLGLLLNLIVSPLISLISLPGL 407

Length = 453

>gnl|CDD|238461 cd00919, Heme_Cu_Oxidase_I, Heme-copper oxidase subunit I

 Score = 39.4 bits (93), Expect = 0.003
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 10/71 (14%)

Query: 256 SILSVIAMV---------GMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSF 306
           SIL  I  +         GM    M L V +++   I   LAL V+A    ++L L  +F
Sbjct: 145 SILGAINFITTILNMRAPGMTLDKMPLFVWSVLVTAILLLLALPVLAA-ALVMLLLDRNF 203

Query: 307 WTTFFVIFLGG 317
            T+FF    GG
Sbjct: 204 GTSFFDPAGGG 214

Heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and mitochondria which catalyze the reduction of O2 and simultaneously pump protons across the membrane. The superfamily is diverse in terms of electron donors, subunit composition, and heme types. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. It has been proposed that Archaea acquired heme-copper oxidases through gene transfer from Gram-positive bacteria. Membership in the superfamily is defined by subunit I, which contains a heme-copper binuclear center (the active site where O2 is reduced to water) formed by a high-spin heme and a copper ion. It also contains a low-spin heme, believed to participate in the transfer of electrons to the binuclear center. Only subunit I is common to the entire superfamily. For every reduction of an O2 molecule, eight protons are taken from the inside aqueous compartment and four electrons are taken from the electron donor on the opposite side of the membrane. The four electrons and four of the protons are used in the reduction of O2; the four remaining protons are pumped across the membrane. This charge separation of four charges contributes to the electrochemical gradient used for ATP synthesis. Two proton channels, the D-pathway and K-pathway, leading to the binuclear center have been identified in subunit I of cytochrome c oxidase (CcO) and ubiquinol oxidase. A well-defined pathway for the transfer of pumped protons beyond the binuclear center has not been identified. Electron transfer occurs in two segments: from the electron donor to the low-spin heme, and from the low-spin heme to the binuclear center. The first segment can be a multi-step process and varies among the different families, while the second segment, a direct transfer, is consistent throughout the superfamily. Length = 463

>gnl|CDD|216329 pfam01148, CTP_transf_1, Cytidylyltransferase family

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 16/124 (12%), Positives = 38/124 (30%), Gaps = 6/124 (4%)

Query: 249 FFSVIWCSILSVIAMVG-----MFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLY 303
           F  +++   L  + +V          L+ L+     +  +     L ++     +LL   
Sbjct: 14  FLILLFLGPLIFLLLVAAIIILALYELIRLLRLKFSSRLLLLTRGLGLIFYLLGLLLVYG 73

Query: 304 GSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDAL 363
                 F ++ L           +  +     ++   + YVG    LL +   F      
Sbjct: 74  EGLLALFGLVLLVIPVLWLLVLPVLAYHRVSSTLLPLF-YVGLFLSLLLITNPFFGLLWA 132

Query: 364 IFFL 367
           +  +
Sbjct: 133 LLLI 136

The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108. Length = 259

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	484
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	100.0
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	98.72
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	98.67
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	98.62
PTZ00037	421	DnaJ_C chaperone protein; Provisional	98.62
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	98.56
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	98.2
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	98.15
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	98.15
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	97.94
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	97.92
PTZ00100	116	DnaJ chaperone protein; Provisional	97.85
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	97.64
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	97.37
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	97.32
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	97.29
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	94.96
KOG0431	453	consensus Auxilin-like protein and related protein	93.97
PF05297	381	Herpes_LMP1: Herpesvirus latent membrane protein 1	93.04
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	91.43
PF09605	186	Trep_Strep: Hypothetical bacterial integral membra	88.98
PRK11598	545	putative metal dependent hydrolase; Provisional	87.14
TIGR02185	189	Trep_Strep conserved hypothetical integral membran	87.14
PRK10263	1355	DNA translocase FtsK; Provisional	86.79
PF11808	90	DUF3329: Domain of unknown function (DUF3329); Int	86.38
PF04156	191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	86.24
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	82.26
PF03208	153	PRA1: PRA1 family protein; InterPro: IPR004895 Thi	82.08
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	80.16

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=4.5e-46  Score=380.75  Aligned_cols=257  Identities=36%  Similarity=0.593  Sum_probs=230.5

Q ss_pred             HHHHHhhhhhhHhhhhhhhhHHHHHHH-HHHHHHHHHHHHHhhhhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHHHHHH
Q 011502          190 LMTNIYNAHDYVSRKVQQVYPVALNHL-GHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFK  268 (484)
Q Consensus       190 ~~t~~~~~rd~v~~~ver~wPiV~~~~-~~~g~L~lLll~~W~DC~iRGfdSf~rlGtas~f~ImWc~flS~tSm~c~~y  268 (484)
                      ++.-.+++||.    +.++||.|+..+ +++|++.|++ .+|+||++||||+++++|++++|+||||+++|.+||.|+.|
T Consensus        11 ~~~~~~k~~~~----~~~~~p~~~~~~~~~~g~~~l~~-k~~~~~~~r~~~~~~~~~~a~~~s~~~s~~~s~~s~~ql~~   85 (490)
T KOG0720|consen   11 VKLRVYKGRDL----VLTKMPLVFSVVFMHNGSPILLL-KVWLDCAIRGFQSFIRMGTAPFFSIMWSTLVSANSMGQLTK   85 (490)
T ss_pred             ecccccchhhh----hhhcCCcccchhhccccCchhHh-HhhccccccCCcchhccCCcchhheeeeeeeeccccccccc
Confidence            34455666664    567788877766 4678887777 99999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccccccchhHHHHHHHHHHHHHHHHhhhhHH
Q 011502          269 FLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLG  348 (484)
Q Consensus       269 ~Ll~lg~Aa~vv~flG~tpgllIValfgIvILWmYgsFW~T~~liI~GG~~FsL~HeR~vlli~t~Ys~YCv~v~VGWLG  348 (484)
                      +++.|+++..++.|+|.+++.+++++||+++||+| +||.+..+-+-  .+|+++|+     +.+.|+.|.+-++.+|++
T Consensus        86 ~~~~~~a~~~~~~~~g~~~~~~~l~~~g~~~l~l~-~~w~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~s~kt~w~  157 (490)
T KOG0720|consen   86 FILIMVATVSVALYIGRVVGSVTLALFGLLLLWLY-SFWGTVLFSFN--LAFLSKDE-----LITVYSVYSALSYKTWWG  157 (490)
T ss_pred             cccchhhhhhhheeccccCcceeeccchHHHHHHH-HhhcchhhhHH--HHHhhhhh-----eeccccceeeeccchhhh
Confidence            99999999999999999999999999999999999 99999888777  89999999     889999999999999999


Q ss_pred             HHHHHhhhhhhhHHHHHHhhhccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCC
Q 011502          349 LLLALNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMT  428 (484)
Q Consensus       349 l~LslNLsFlSnDiL~~lLq~nv~~~~~~~~~Eq~~~~~~~~~~f~~e~~p~s~sE~~~~~~sd~~p~~~sTs~~~se~t  428 (484)
                      .++.+|+.+|.-|...++....+..+ .              .+.-.+++..+..|++.+...++.+|..++.+.+++.+
T Consensus       158 ~~~k~l~~~i~l~f~~~f~~~~~~~~-~--------------~~r~l~~vk~~~~e~g~~tv~~~~~g~~~e~~va~n~t  222 (490)
T KOG0720|consen  158 LTLKLLRAVILLDFSIYFERNKIIQQ-T--------------ADRPLEPVKDSGAEEGDETVESRDYGCKKEIPVATNAT  222 (490)
T ss_pred             hcchhhhhhhhhhcceeeeeehhhHH-H--------------HhhhcchhhhhccccCCCchhcCCcccccccccccchh
Confidence            99999999999999999988666655 2              11223456667778888889999999999999999999


Q ss_pred             c-HHHHHHHhccccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          429 S-EDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       429 s-~dEV~RIl~c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      + +|++.|+++|+|||+||||+++  +|+++|||.|||||||||||||.
T Consensus       223 ~~adrl~re~~~~daYsvlGl~~d--~sd~~lKk~Yrk~A~LVhPDKn~  269 (490)
T KOG0720|consen  223 SFADRLSRELNILDAYSALGLPSD--CSDADLKKNYRKKAMLVHPDKNM  269 (490)
T ss_pred             hHHHhhhhhhcCCCchhhcCCCCC--CCHHHHHHHHHhhceEeCCCccC
Confidence            9 9999999999999999999985  99999999999999999999996

>cd06257 DnaJ DnaJ domain or J-domain

Probab=98.72  E-value=8.7e-09  Score=75.25  Aligned_cols=34  Identities=24%  Similarity=0.177  Sum_probs=32.2

Q ss_pred             cchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          441 DHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       441 D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      |||++||+++.  ++.++||+.||+++++.|||++-
T Consensus         1 ~~y~vLgl~~~--~~~~~ik~~y~~l~~~~HPD~~~   34 (55)
T cd06257           1 DYYDILGVPPD--ASDEEIKKAYRKLALKYHPDKNP   34 (55)
T ss_pred             ChHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            79999999984  99999999999999999999985

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=98.67  E-value=1.5e-08  Score=75.41  Aligned_cols=35  Identities=29%  Similarity=0.294  Sum_probs=33.1

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||++|||++.  ++.++||++||+++++.|||++.
T Consensus         1 ~~~y~vLgl~~~--~~~~~ik~ay~~l~~~~HPD~~~   35 (60)
T smart00271        1 TDYYEILGVPRD--ASLDEIKKAYRKLALKYHPDKNP   35 (60)
T ss_pred             CCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            489999999995  99999999999999999999986

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.62  E-value=2.4e-08  Score=96.59  Aligned_cols=51  Identities=25%  Similarity=0.264  Sum_probs=47.4

Q ss_pred             CCCCCcHHHHHHHhc-c-----ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          424 DSEMTSEDEVVRLLN-C-----TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       424 ~se~ts~dEV~RIl~-c-----~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      ++-+|+..+|+||+. +     ++-||||+|.|.  ++.++|||-|||+++|||||||-
T Consensus        31 d~vLts~~qIeRllrpgstyfnLNpfeVLqIdpe--v~~edikkryRklSilVHPDKN~   87 (250)
T KOG1150|consen   31 DSVLTSKQQIERLLRPGSTYFNLNPFEVLQIDPE--VTDEDIKKRYRKLSILVHPDKNP   87 (250)
T ss_pred             hcccCcHHHHHHHhcCCccccccChHHHHhcCCC--CCHHHHHHHHHhhheeecCCCCc
Confidence            678999999999999 3     788999999995  99999999999999999999995

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=98.62  E-value=1.8e-08  Score=103.67  Aligned_cols=34  Identities=26%  Similarity=0.220  Sum_probs=32.8

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCC  475 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~  475 (484)
                      .|||++|||+|+  +++++|||+|||+|++.|||||
T Consensus        28 ~d~Y~vLGV~~~--As~~eIKkAYrkla~k~HPDk~   61 (421)
T PTZ00037         28 EKLYEVLNLSKD--CTTSEIKKAYRKLAIKHHPDKG   61 (421)
T ss_pred             hhHHHHcCCCCC--CCHHHHHHHHHHHHHHHCCCCC
Confidence            699999999995  9999999999999999999997

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=98.56  E-value=4.1e-08  Score=74.49  Aligned_cols=34  Identities=21%  Similarity=0.168  Sum_probs=32.1

Q ss_pred             cchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          441 DHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       441 D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      |||+||||+++  ++.++||+.||+++..+|||++-
T Consensus         1 ~~y~iLgl~~~--~~~~eik~~y~~l~~~~HPD~~~   34 (64)
T PF00226_consen    1 NPYEILGLPPD--ASDEEIKKAYRRLSKQYHPDKNS   34 (64)
T ss_dssp             HHHHHCTSTTT--SSHHHHHHHHHHHHHHTSTTTGT
T ss_pred             ChHHHCCCCCC--CCHHHHHHHHHhhhhccccccch
Confidence            69999999995  99999999999999999999974

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.20  E-value=1.1e-06  Score=85.55  Aligned_cols=42  Identities=21%  Similarity=0.177  Sum_probs=37.5

Q ss_pred             HHHHHhccccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcc
Q 011502          432 EVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCC  475 (484)
Q Consensus       432 EV~RIl~c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~  475 (484)
                      .++|=++-.|=||||||+|  ++++++|||+||++++++||||+
T Consensus        91 ~~~~~~~~fDPyEILGl~p--gas~~eIKkaYR~LSik~HPDK~  132 (230)
T KOG0721|consen   91 NSRRERQKFDPYEILGLDP--GASEKEIKKAYRRLSIKYHPDKQ  132 (230)
T ss_pred             hhhHHhhcCCcHHhhCCCC--CCCHHHHHHHHHHhhhhhCCCcC
Confidence            3446667799999999999  59999999999999999999996

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.15  E-value=1.1e-06  Score=87.60  Aligned_cols=36  Identities=25%  Similarity=0.217  Sum_probs=33.5

Q ss_pred             cccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          439 CTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       439 c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      -.|+|+|||++++  ++.++|||+|||+|++-||||+=
T Consensus        30 ~~~LYdVLgl~k~--at~d~IKKaYR~L~~k~HPD~~g   65 (279)
T KOG0716|consen   30 RLDLYDVLGLPKT--ATKDEIKKAYRKLALKYHPDKNG   65 (279)
T ss_pred             hhHHHHHhCCCcc--cchHHHHHHHHHHHHHhCCCcCC
Confidence            4799999999996  99999999999999999999973

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=98.15  E-value=9.5e-07  Score=99.56  Aligned_cols=36  Identities=19%  Similarity=0.047  Sum_probs=33.8

Q ss_pred             cccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          439 CTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       439 c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      ..|||++|||+|+  +++++|||+|||+|++.|||||-
T Consensus       572 d~dYYdILGVs~d--AS~~EIKKAYRKLAlkyHPDKN~  607 (1136)
T PTZ00341        572 DTLFYDILGVGVN--ADMKEISERYFKLAENYYPPKRS  607 (1136)
T ss_pred             CCChHHHcCCCCC--CCHHHHHHHHHHHHHHhCCCCCC
Confidence            3899999999996  99999999999999999999973

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=97.94  E-value=5.1e-06  Score=81.07  Aligned_cols=35  Identities=31%  Similarity=0.315  Sum_probs=33.0

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|+|++||++++  +|.++|||+|||++++.||||.-
T Consensus       200 ~~ay~vLgv~~~--as~~eIk~aYr~L~~~~HPDk~~  234 (267)
T PRK09430        200 EDAYKVLGVSES--DDDQEIKRAYRKLMSEHHPDKLV  234 (267)
T ss_pred             HhHHHHcCCCCC--CCHHHHHHHHHHHHHHhCcCCCC
Confidence            799999999995  99999999999999999999953

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.92  E-value=5.6e-06  Score=81.86  Aligned_cols=35  Identities=29%  Similarity=0.284  Sum_probs=32.9

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||+||||+++  ++.++||++|||+|-+.|||-|-
T Consensus        43 ~d~Y~vLgv~~~--At~~EIK~Af~~LaKkyHPD~n~   77 (288)
T KOG0715|consen   43 EDYYKVLGVSRN--ATLSEIKSAFRKLAKKYHPDVNK   77 (288)
T ss_pred             cchhhhhCcCCC--CCHHHHHHHHHHHHHhhCCCCCC
Confidence            499999999995  99999999999999999999875

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=97.85  E-value=9.5e-06  Score=72.04  Aligned_cols=34  Identities=9%  Similarity=0.061  Sum_probs=31.8

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCC  475 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~  475 (484)
                      .++|++|||++.  ++.++||+.||++++..|||+.
T Consensus        65 ~eAy~ILGv~~~--As~~eIkkaYRrLa~~~HPDkg   98 (116)
T PTZ00100         65 SEAYKILNISPT--ASKERIREAHKQLMLRNHPDNG   98 (116)
T ss_pred             HHHHHHcCCCCC--CCHHHHHHHHHHHHHHhCCCCC
Confidence            489999999995  9999999999999999999984

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=97.64  E-value=3.3e-05  Score=80.47  Aligned_cols=42  Identities=24%  Similarity=0.268  Sum_probs=36.8

Q ss_pred             HHHHHHhcc---ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCc
Q 011502          431 DEVVRLLNC---TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFC  474 (484)
Q Consensus       431 dEV~RIl~c---~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk  474 (484)
                      +--+|++.-   .|||.||||.|+  ++--+|.|+|||+|.+.|||-
T Consensus       382 e~Akrlkkqs~kRDYYKILGVkRn--AsKqEI~KAYRKlAqkWHPDN  426 (504)
T KOG0624|consen  382 ERAKRLKKQSGKRDYYKILGVKRN--ASKQEITKAYRKLAQKWHPDN  426 (504)
T ss_pred             HHHHHHHHHhccchHHHHhhhccc--ccHHHHHHHHHHHHHhcCCcc
Confidence            445677665   899999999995  999999999999999999993

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.37  E-value=6.5e-05  Score=79.16  Aligned_cols=35  Identities=29%  Similarity=0.302  Sum_probs=33.2

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      +|||-|||+.++  ++.++|||+|||+||..|||++-
T Consensus       373 kd~ykilGi~~~--as~~eikkayrk~AL~~Hpd~~a  407 (486)
T KOG0550|consen  373 KDWYKILGISRN--ASDDEIKKAYRKLALVHHPDKNA  407 (486)
T ss_pred             hhHHHHhhhhhh--cccchhhhHHHHHHHHhCCCcCc
Confidence            899999999996  89999999999999999999974

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.32  E-value=0.00011  Score=73.95  Aligned_cols=35  Identities=20%  Similarity=0.219  Sum_probs=32.8

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      -|-|+||||+|.  ++.++|+|+||++|..-|||++-
T Consensus        33 enCYdVLgV~Re--a~KseIakAYRqLARrhHPDr~r   67 (329)
T KOG0722|consen   33 ENCYDVLGVARE--ANKSEIAKAYRQLARRHHPDRNR   67 (329)
T ss_pred             hhHHHHhhhhhh--ccHHHHHHHHHHHHHHhCCcccC
Confidence            788999999996  79999999999999999999874

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=97.29  E-value=0.00012  Score=77.96  Aligned_cols=37  Identities=19%  Similarity=0.158  Sum_probs=33.7

Q ss_pred             ccccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          438 NCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       438 ~c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      +..|=|||||+...  .++.||||.||+++|++||||--
T Consensus        96 ~~fDPyEILGI~~~--ts~rdik~~yr~Ls~KfhpdK~~  132 (610)
T COG5407          96 RGFDPYEILGIDQD--TSERDIKKRYRMLSMKFHPDKAP  132 (610)
T ss_pred             cCCChHHhhcccCC--CcHHHHHHHHHhheeecChhhcC
Confidence            34899999999995  99999999999999999999953

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=94.96  E-value=0.016  Score=67.47  Aligned_cols=37  Identities=11%  Similarity=-0.028  Sum_probs=29.8

Q ss_pred             ccchhhcCcCCCCC-C-ChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFEN-V-DVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~-i-d~s~LKKeYRKkALlvHPdk~~  476 (484)
                      -+.||||.++-... - +++-|||.|||+|++.|||||-
T Consensus      1281 d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP 1319 (2235)
T KOG1789|consen 1281 DLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP 1319 (2235)
T ss_pred             HHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc
Confidence            46799999887621 2 3478999999999999999984

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=93.97  E-value=0.028  Score=59.46  Aligned_cols=22  Identities=32%  Similarity=0.460  Sum_probs=20.9

Q ss_pred             CChHHHHHHHhhhhhhcCCCcc
Q 011502          454 VDVSILKREYRKKVCCLNHFCC  475 (484)
Q Consensus       454 id~s~LKKeYRKkALlvHPdk~  475 (484)
                      |+++.+||+|||-.|.|||||-
T Consensus       400 Vtp~~VKKaYrKA~L~VHPDKl  421 (453)
T KOG0431|consen  400 VTPAQVKKAYRKAVLCVHPDKL  421 (453)
T ss_pred             cCHHHHHHHHHhhhheeCcccc
Confidence            8899999999999999999994

>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4)

Probab=93.04  E-value=0.027  Score=57.95  Aligned_cols=49  Identities=33%  Similarity=0.544  Sum_probs=0.0

Q ss_pred             HHHHHh-hhhhhHHHHHHhhcccccccchhHHHHHHHHH---HHHHHHHhhhhHHHHHHH
Q 011502          298 ILLWLY-GSFWTTFFVIFLGGLAFKFTHERLALFITTMY---SIYCAWTYVGWLGLLLAL  353 (484)
Q Consensus       298 vILWmY-gsFW~T~~liI~GG~~FsL~HeR~vlli~t~Y---s~YCv~v~VGWLGl~Lsl  353 (484)
                      .+||-| ++|||...+.    ++|.|   -.++||+++|   +-+-+-+-+-||=|||||
T Consensus       127 ~lLr~~GAs~WtiLaFc----LAF~L---aivlLIIAv~L~qaWfT~L~dL~WL~LFlai  179 (381)
T PF05297_consen  127 WLLRELGASFWTILAFC----LAFLL---AIVLLIIAVLLHQAWFTILVDLYWLLLFLAI  179 (381)
T ss_dssp             ------------------------------------------------------------
T ss_pred             HHHHHhhhHHHHHHHHH----HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444 5788754332    45655   3567777776   456677788899999885

LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=91.43  E-value=0.11  Score=53.45  Aligned_cols=36  Identities=25%  Similarity=0.293  Sum_probs=32.2

Q ss_pred             ccchhhcCcCCC-CCCChHHHHHHHhhhhhhcCCCcc
Q 011502          440 TDHYSALGLSRF-ENVDVSILKREYRKKVCCLNHFCC  475 (484)
Q Consensus       440 ~D~YevLGv~r~-~~id~s~LKKeYRKkALlvHPdk~  475 (484)
                      .|+|.+|||+++ -.++++.|+|+-+|+.++.||||.
T Consensus        43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~   79 (379)
T COG5269          43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKT   79 (379)
T ss_pred             hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccch
Confidence            899999999988 347788888899999999999997

>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus

Probab=88.98  E-value=11  Score=35.38  Aligned_cols=59  Identities=17%  Similarity=0.342  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccccc----cchhHHHHHHHHHHHHHHHHhhhh
Q 011502          288 ALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKF----THERLALFITTMYSIYCAWTYVGW  346 (484)
Q Consensus       288 gllIValfgIvILWmYgsFW~T~~liI~GG~~FsL----~HeR~vlli~t~Ys~YCv~v~VGW  346 (484)
                      .++|-++.--+++.+-|.+|+.....+++|...-+    .|-|=.--++.-|++|+++.--.|
T Consensus        60 ~~~i~~~i~gl~~~~~G~~~~~~~~~iv~gliAElI~~~g~y~~~~~~~iay~vf~~~~~g~~  122 (186)
T PF09605_consen   60 AFLIMGIIMGLIFFLMGHGWPMLIVCIVGGLIAELILKKGGYKSKKRNTIAYAVFSLGYMGPY  122 (186)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhH
Confidence            45666666666788889999999999999875432    333434456777999998776333

If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).

>PRK11598 putative metal dependent hydrolase; Provisional

Probab=87.14  E-value=4.2  Score=44.28  Aligned_cols=39  Identities=13%  Similarity=0.177  Sum_probs=24.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhh
Q 011502          247 TSFFSVIWCSILSVIAMVGMFK----FLMVLVVAALVAFFIGF  285 (484)
Q Consensus       247 as~f~ImWc~flS~tSm~c~~y----~Ll~lg~Aa~vv~flG~  285 (484)
                      .++.++++|.++.+++..+.-+    +++++.+.++++.|.-+
T Consensus        51 ~s~~~~~~~~~~~~~~l~~~~~~~k~~~~~l~~~sa~~~Yf~~   93 (545)
T PRK11598         51 ASMPVVAFSVINIVFTLLSFPWLRRPLACLFILVGAAAQYFMM   93 (545)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5677788888888887776544    34555555555555433

>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185

Probab=87.14  E-value=14  Score=34.99  Aligned_cols=94  Identities=15%  Similarity=0.329  Sum_probs=50.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH------------HHHHHHHHHHHHHHHhhhhhhHHHHH
Q 011502          246 TTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFAL------------ALVVVALSGTILLWLYGSFWTTFFVI  313 (484)
Q Consensus       246 tas~f~ImWc~flS~tSm~c~~y~Ll~lg~Aa~vv~flG~tp------------gllIValfgIvILWmYgsFW~T~~li  313 (484)
                      +..+|.++-.-+.-+++|.++.-.-..+-...++..+++-++            .++|.++.--+++.+-|++|+.....
T Consensus         8 ~igiftaiyfvi~~v~~~l~~~~~~~~~~~~p~i~al~~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G~~~~~~~~~   87 (189)
T TIGR02185         8 FIGLLTAIYFAIQFIVGMLTMTTGFFAHLFSPGITAFLVGIIFFLMVAKVPKRGVIFIFGILLGLLFFLMGMYWPMIISS   87 (189)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhHHHhhhhhhcCCccHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence            455666555555555666666532222222333333333322            34455555555667888999888877


Q ss_pred             Hhhcccccc----cchhHHHHHHHHHHHHH
Q 011502          314 FLGGLAFKF----THERLALFITTMYSIYC  339 (484)
Q Consensus       314 I~GG~~FsL----~HeR~vlli~t~Ys~YC  339 (484)
                      +++|..--+    .+-|=..-.+..|.+||
T Consensus        88 ii~gliaeli~~~g~Yks~~~~~ia~~~~~  117 (189)
T TIGR02185        88 IIGGLLADIIASTGGYKNKRKVTIAYVLFF  117 (189)
T ss_pred             HHHHHHHHHHHHhCCcccHHHHHHHHHHHH
Confidence            887753222    22232234455677776

This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.

>PRK10263 DNA translocase FtsK; Provisional

Probab=86.79  E-value=4.3  Score=48.82  Aligned_cols=11  Identities=27%  Similarity=0.830  Sum_probs=5.4

Q ss_pred             hhhHHHHHHhh
Q 011502          306 FWTTFFVIFLG  316 (484)
Q Consensus       306 FW~T~~liI~G  316 (484)
                      +|+.+++|+.|
T Consensus       170 llLIGLiLlTg  180 (1355)
T PRK10263        170 VWAAGLTLFTG  180 (1355)
T ss_pred             HHHHHHHHHHh
Confidence            55555544444

>PF11808 DUF3329: Domain of unknown function (DUF3329); InterPro: IPR021766 This family of proteins are functionally uncharacterised

Probab=86.38  E-value=2.2  Score=35.98  Aligned_cols=36  Identities=28%  Similarity=0.509  Sum_probs=27.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Q 011502          268 KFLMVLVVAALVAFFIGFALALVVVALSGTILLWLY  303 (484)
Q Consensus       268 y~Ll~lg~Aa~vv~flG~tpgllIValfgIvILWmY  303 (484)
                      .+++.+.+|++++.++|..++++.+|+++.++-++|
T Consensus        11 ~l~~~~l~~~lvG~~~g~~~~~l~~~l~~~l~wh~~   46 (90)
T PF11808_consen   11 RLLLLLLAAALVGWLFGHLWWALLLGLLLYLFWHLY   46 (90)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            455667788888889999998888888877764333

This family is only found in bacteria. ; GO: 0004673 protein histidine kinase activity

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion

Probab=86.24  E-value=2.6  Score=38.47  Aligned_cols=47  Identities=26%  Similarity=0.222  Sum_probs=22.5

Q ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccccccch
Q 011502          270 LMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHE  325 (484)
Q Consensus       270 Ll~lg~Aa~vv~flG~tpgllIValfgIvILWmYgsFW~T~~liI~GG~~FsL~He  325 (484)
                      |++.|+++++.  .|..+|.++.++.|++++=       -|++++.+|+.|.....
T Consensus        18 li~~gI~~Lv~--~~~~l~~~~s~~lg~~~lA-------lg~vL~~~g~~~~~~~~   64 (191)
T PF04156_consen   18 LIASGIAALVL--FISGLGALISFILGIALLA-------LGVVLLSLGLLCLLSKR   64 (191)
T ss_pred             HHHHHHHHHHH--HHhhhHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHcc
Confidence            44444444333  3333555555555554431       25666666665554333

The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=82.26  E-value=1.2  Score=40.39  Aligned_cols=30  Identities=17%  Similarity=0.102  Sum_probs=27.4

Q ss_pred             hhcCcCCCCCCChHHHHHHHhhhhhhcCCCcc
Q 011502          444 SALGLSRFENVDVSILKREYRKKVCCLNHFCC  475 (484)
Q Consensus       444 evLGv~r~~~id~s~LKKeYRKkALlvHPdk~  475 (484)
                      -||||+|.  .+.+-||.+.||.-+.-|||+-
T Consensus        60 lIL~v~~s--~~k~KikeaHrriM~~NHPD~G   89 (112)
T KOG0723|consen   60 LILGVTPS--LDKDKIKEAHRRIMLANHPDRG   89 (112)
T ss_pred             HHhCCCcc--ccHHHHHHHHHHHHHcCCCcCC
Confidence            38999985  9999999999999999999985

>PF03208 PRA1: PRA1 family protein; InterPro: IPR004895 This family includes yeast hypothetical proteins and the uncharacterised rat prenylated rab acceptor protein PRA1

Probab=82.08  E-value=8.7  Score=34.05  Aligned_cols=72  Identities=17%  Similarity=0.208  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhH-HHHHHhhcccccccchhHHHHHHHHHHHHHHH
Q 011502          266 MFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTT-FFVIFLGGLAFKFTHERLALFITTMYSIYCAW  341 (484)
Q Consensus       266 ~~y~Ll~lg~Aa~vv~flG~tpgllIValfgIvILWmYgsFW~T-~~liI~GG~~FsL~HeR~vlli~t~Ys~YCv~  341 (484)
                      .-|+++.+++.+..    .++--.++++++.++.+|.|-+.|.. .--+.++|.-+.-++.-.++++.++..+|+..
T Consensus        42 ~NY~~i~~~~~~~~----ll~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  114 (153)
T PF03208_consen   42 TNYLLIFLLLFLIF----LLTNPFFLLVLLLVVALWAFIYKSRKENDPIVIGGRKISPRQVLLALLIVSILLLFFTS  114 (153)
T ss_pred             HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhhcccCcchhccCcccCHHHHHHHHHHHHHHHHHHHh
Confidence            44666665554432    33334445555667777888888876 34456677777777777777777777777744

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=80.16  E-value=1.3  Score=45.09  Aligned_cols=33  Identities=9%  Similarity=0.214  Sum_probs=30.4

Q ss_pred             cchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcc
Q 011502          441 DHYSALGLSRFENVDVSILKREYRKKVCCLNHFCC  475 (484)
Q Consensus       441 D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~  475 (484)
                      .||.+|||..  ++|.++++.+|.++|-.+|||..
T Consensus        48 e~fril~v~e--~~~adevr~af~~lakq~hpdsg   80 (342)
T KOG0568|consen   48 ECFRILGVEE--GADADEVREAFHDLAKQVHPDSG   80 (342)
T ss_pred             HHHHHhcccc--cCchhHHHHHHHHHHHHcCCCCC
Confidence            5799999987  79999999999999999999964

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	484
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	4e-04

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 4/52 (7%)

Query: 416 GVPSTSGDDSEMTSE--DEVVRLLNCTDHYSALGLSRFENVDVSILKREYRK 465
           G   +SG  +  T E  D + R+ N  D +  LG+          + + YRK
Sbjct: 1   GSSGSSGSSASFTKEQADAIRRIRNSKDSWDMLGVKP--GASRDEVNKAYRK 50

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	484
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.22
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	98.96
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	98.81
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	98.8
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	98.79
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	98.79
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	98.77
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	98.76
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	98.76
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	98.74
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	98.74
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	98.74
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	98.74
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	98.72
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	98.72
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	98.7
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	98.7
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	98.69
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	98.65
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	98.64
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	98.57
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	98.55
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	98.53
2guz_A	71	Mitochondrial import inner membrane translocase su	98.52
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	98.46
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.44
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	98.41
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	98.08
2guz_B	65	Mitochondrial import inner membrane translocase su	96.98
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	96.88
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	96.07

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.22  E-value=7.8e-12  Score=101.41  Aligned_cols=48  Identities=23%  Similarity=0.355  Sum_probs=44.3

Q ss_pred             CCcHHHHHHHhccccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          427 MTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       427 ~ts~dEV~RIl~c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      -.+.++|++++.+.|||+||||++.  ++.++|||+|||+|++.||||+-
T Consensus        14 ~~~~~~~~~~~~~~~~y~iLgv~~~--as~~eIk~aYr~la~~~HPDk~~   61 (90)
T 2ys8_A           14 KEQADAIRRIRNSKDSWDMLGVKPG--ASRDEVNKAYRKLAVLLHPDKCV   61 (90)
T ss_dssp             HHHHHHHHHHHTCSSHHHHHTCCTT--CCHHHHHHHHHHHHHHHCTTTCC
T ss_pred             HHHHHHHHHHhcCCCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            3567889999999999999999995  99999999999999999999983

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.96  E-value=6.8e-11  Score=99.05  Aligned_cols=43  Identities=19%  Similarity=0.199  Sum_probs=39.7

Q ss_pred             HHHHHhcc-----ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          432 EVVRLLNC-----TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       432 EV~RIl~c-----~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      +|+||+.|     .|||++|||++.  ++.++||++||+++++.||||+-
T Consensus         7 ~~~~i~~~~~~~~~d~Y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~   54 (112)
T 2ctq_A            7 GMDAILNYRSEDTEDYYTLLGCDEL--SSVEQILAEFKVRALECHPDKHP   54 (112)
T ss_dssp             CCCCCCCCCCCCCCCHHHHTTCCTT--SCHHHHHHHHHHHHHTTCTTTCT
T ss_pred             hHHHHHhccccCCCCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            57788888     799999999995  99999999999999999999984

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=98.81  E-value=1.6e-09  Score=86.91  Aligned_cols=38  Identities=26%  Similarity=0.200  Sum_probs=35.0

Q ss_pred             hccccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          437 LNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       437 l~c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      +...|||+||||++.  ++.++||++||+++++.||||+-
T Consensus        13 ~~~~~~y~iLgv~~~--as~~eIk~aYr~l~~~~HPDk~~   50 (94)
T 1wjz_A           13 TLKKDWYSILGADPS--ANMSDLKQKYQKLILLYHPDKQS   50 (94)
T ss_dssp             SSCSCHHHHTTCCTT--CCHHHHHHHHHHTTSSSCSTTCC
T ss_pred             CCCCChHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            456899999999995  99999999999999999999974

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=2.3e-09  Score=83.76  Aligned_cols=36  Identities=19%  Similarity=0.170  Sum_probs=33.7

Q ss_pred             cccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          439 CTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       439 c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      ..|||++|||++.  ++.++||++||+++++.|||++-
T Consensus         6 ~~~~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPD~~~   41 (79)
T 2dn9_A            6 SGDYYQILGVPRN--ASQKEIKKAYYQLAKKYHPDTNK   41 (79)
T ss_dssp             CSCHHHHHTCCTT--CCHHHHHHHHHHHHHHTCTTTCS
T ss_pred             CCCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            4799999999995  99999999999999999999985

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=98.79  E-value=7.8e-10  Score=92.14  Aligned_cols=41  Identities=20%  Similarity=0.319  Sum_probs=36.0

Q ss_pred             HHHhcc-ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          434 VRLLNC-TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       434 ~RIl~c-~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .++|.. .++|++|||++.  +++++|||+|||+|++.|||||-
T Consensus        26 ~~~L~~~~~~y~~Lgv~~~--as~~eIKkAYRklal~~HPDK~~   67 (92)
T 2qwo_B           26 HTVLWAGETKWKPVGMADL--VTPEQVKKVYRKAVLVVHPCKAT   67 (92)
T ss_dssp             GGTSCTTCCSCCCCCGGGS--SSHHHHHHHHHHHHHHTCHHHHT
T ss_pred             HHHhcccccCCeecCCCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            445555 499999999995  99999999999999999999974

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.79  E-value=2.6e-09  Score=83.45  Aligned_cols=36  Identities=28%  Similarity=0.266  Sum_probs=33.7

Q ss_pred             cccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          439 CTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       439 c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      ..|||++|||++.  ++.++||++||+++++.|||++-
T Consensus         6 ~~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~   41 (78)
T 2ctp_A            6 SGDYYEILGVSRG--ASDEDLKKAYRRLALKFHPDKNH   41 (78)
T ss_dssp             SCCHHHHHTCCTT--CCHHHHHHHHHHHHTTSCTTTCS
T ss_pred             CCCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            4799999999995  99999999999999999999983

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=98.77  E-value=3.1e-09  Score=82.89  Aligned_cols=35  Identities=29%  Similarity=0.317  Sum_probs=33.0

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||++|||++.  ++.++||++||+++++.|||++-
T Consensus         3 ~~~y~iLgv~~~--as~~~Ik~ayr~l~~~~HPD~~~   37 (77)
T 1hdj_A            3 KDYYQTLGLARG--ASDEEIKRAYRRQALRYHPDKNK   37 (77)
T ss_dssp             CCSHHHHTCCTT--CCHHHHHHHHHHHHHTTCTTTCC
T ss_pred             CCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            699999999995  99999999999999999999974

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.76  E-value=3.5e-09  Score=84.97  Aligned_cols=36  Identities=14%  Similarity=0.129  Sum_probs=33.6

Q ss_pred             cccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          439 CTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       439 c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      ..|||+||||++.  ++.++|||+||+++++.||||+-
T Consensus         6 ~~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~   41 (88)
T 2ctr_A            6 SGSYYDILGVPKS--ASERQIKKAFHKLAMKYHPDKNK   41 (88)
T ss_dssp             CCSHHHHHTCCTT--CCHHHHHHHHHHHHHHTCTTTCC
T ss_pred             CCCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            4799999999995  99999999999999999999974

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=3.6e-09  Score=83.18  Aligned_cols=35  Identities=23%  Similarity=0.217  Sum_probs=33.2

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||+||||++.  ++.++||++||+++++.|||++-
T Consensus         9 ~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~   43 (82)
T 2ej7_A            9 VDYYEVLDVPRQ--ASSEAIKKAYRKLALKWHPDKNP   43 (82)
T ss_dssp             CCHHHHTTCCTT--CCHHHHHHHHHHHHTTSCTTTCS
T ss_pred             cCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            799999999995  99999999999999999999974

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=98.74  E-value=3e-09  Score=86.17  Aligned_cols=38  Identities=26%  Similarity=0.259  Sum_probs=35.2

Q ss_pred             HhccccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcc
Q 011502          436 LLNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCC  475 (484)
Q Consensus       436 Il~c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~  475 (484)
                      ++...|||+||||++.  ++.++||++||+++++.||||+
T Consensus         4 m~~~~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~   41 (92)
T 2o37_A            4 MVKETKLYDLLGVSPS--ANEQELKKGYRKAALKYHPDKP   41 (92)
T ss_dssp             CCSCCHHHHHHTCCTT--CCHHHHHHHHHHHHHHHCTTST
T ss_pred             cccCCCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCC
Confidence            4567899999999995  9999999999999999999997

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=98.74  E-value=4.8e-09  Score=81.25  Aligned_cols=37  Identities=24%  Similarity=0.171  Sum_probs=34.1

Q ss_pred             ccccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          438 NCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       438 ~c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .-.|||++|||++.  ++.++||++||+++++.|||++-
T Consensus         6 ~~~~~y~iLgl~~~--a~~~eIk~ayr~l~~~~HPD~~~   42 (73)
T 2och_A            6 KETGYYDVLGVKPD--ASDNELKKAYRKMALKFHPDKNP   42 (73)
T ss_dssp             CCCCHHHHHTCCTT--CCHHHHHHHHHHHHHHTCTTTCT
T ss_pred             CCCCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCc
Confidence            45799999999995  99999999999999999999973

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=98.74  E-value=1.4e-09  Score=91.80  Aligned_cols=42  Identities=10%  Similarity=0.143  Sum_probs=36.4

Q ss_pred             HHHHHhcc--------ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          432 EVVRLLNC--------TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       432 EV~RIl~c--------~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      +|+.+|.+        .|||++||+++   +++++|||+|||+|++.|||||-
T Consensus        25 ~ir~lL~~l~~~l~~~~d~Y~vl~~~~---As~~eIKkAYRklal~~HPDK~~   74 (106)
T 3ag7_A           25 NIRSLLSTLQYILWSGSGWKPVPLMDM---IEGNAVRKSYQRALLILHPDKLQ   74 (106)
T ss_dssp             CHHHHHTTGGGTSCTTSCCCCCCGGGS---CSHHHHHHHHHHHHHHHCHHHHH
T ss_pred             HHHHHHHHHHHHhcccCCHHHHcCCCC---CCHHHHHHHHHHHHHHHCcCcCC
Confidence            45666654        59999999985   99999999999999999999974

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=98.74  E-value=4.4e-09  Score=84.38  Aligned_cols=35  Identities=26%  Similarity=0.238  Sum_probs=33.3

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||++|||++.  ++.++|||+||+++++.||||+-
T Consensus        17 ~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~   51 (88)
T 2cug_A           17 FDPYRVLGVSRT--ASQADIKKAYKKLAREWHPDKNK   51 (88)
T ss_dssp             SCHHHHHTCCTT--CCHHHHHHHHHHHHHHSCTTTCC
T ss_pred             CCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            799999999995  99999999999999999999974

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.72  E-value=4.6e-09  Score=84.54  Aligned_cols=35  Identities=20%  Similarity=0.176  Sum_probs=33.1

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||+||||++.  ++.++||++||+++++.||||+-
T Consensus         9 ~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~   43 (92)
T 2dmx_A            9 ANYYEVLGVQAS--ASPEDIKKAYRKLALRWHPDKNP   43 (92)
T ss_dssp             CCHHHHHTCCTT--CCTTHHHHHHHHHHHHTCTTTCS
T ss_pred             cCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCCCCCC
Confidence            699999999995  99999999999999999999974

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=98.72  E-value=4.2e-09  Score=88.00  Aligned_cols=35  Identities=23%  Similarity=0.213  Sum_probs=33.3

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||++|||++.  ++.++|||+|||+|++.||||+-
T Consensus        17 ~~~Y~vLgv~~~--as~~eIk~aYr~la~~~HPDk~~   51 (109)
T 2ctw_A           17 ESLYHVLGLDKN--ATSDDIKKSYRKLALKYHPDKNP   51 (109)
T ss_dssp             CCHHHHHTCCTT--CCHHHHHHHHHHHHHHSCTTTST
T ss_pred             CCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            799999999995  99999999999999999999984

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.70  E-value=5.6e-09  Score=85.57  Aligned_cols=35  Identities=17%  Similarity=0.170  Sum_probs=33.1

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||+||||++.  ++.++||++||++|++.||||+-
T Consensus        17 ~~~Y~vLgv~~~--as~~eIk~ayr~l~~~~HPDk~~   51 (99)
T 2yua_A           17 TALYDLLGVPST--ATQAQIKAAYYRQCFLYHPDRNS   51 (99)
T ss_dssp             SHHHHHHTCCTT--CCHHHHHHHHHHHHHHSCTTTCS
T ss_pred             cCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            699999999995  99999999999999999999984

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=98.70  E-value=6.8e-09  Score=85.44  Aligned_cols=35  Identities=17%  Similarity=0.263  Sum_probs=33.2

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||+||||++.  ++.++||++|||++++.||||+-
T Consensus         3 ~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~   37 (103)
T 1bq0_A            3 QDYYEILGVSKT--AEEREIRKAYKRLAMKYHPDRNQ   37 (103)
T ss_dssp             CCSTTTTSSCSS--CCHHHHHHHHHHHHTTTCTTTCT
T ss_pred             CCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            699999999995  99999999999999999999975

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=98.69  E-value=2.1e-09  Score=85.76  Aligned_cols=36  Identities=17%  Similarity=0.088  Sum_probs=33.2

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCC  475 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~  475 (484)
                      .++|++|||++...++.++||++|||+|++.||||+
T Consensus        11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~   46 (79)
T 1faf_A           11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG   46 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence            589999999995449999999999999999999996

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=98.65  E-value=1.1e-08  Score=84.58  Aligned_cols=35  Identities=20%  Similarity=0.207  Sum_probs=32.9

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||+||||++.  ++.++||++||+++++.||||+-
T Consensus         2 ~d~Y~iLgv~~~--as~~eIk~aYr~la~~~HPDk~~   36 (99)
T 2lgw_A            2 ASYYEILDVPRS--ASADDIKKAYRRKALQWHPDKNP   36 (99)
T ss_dssp             CCHHHHSSSCTT--SCHHHHHHHHHHHHHHTSTTTCC
T ss_pred             CCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            589999999995  99999999999999999999974

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=98.64  E-value=6.7e-09  Score=85.07  Aligned_cols=35  Identities=11%  Similarity=-0.166  Sum_probs=32.8

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|+|+||||+++  ++.++|||+|||+|++.|||||-
T Consensus        16 ~~~y~vLgv~~~--as~~eIKkaYrkla~~~HPDk~~   50 (88)
T 1iur_A           16 KEVTSVVEQAWK--LPESERKKIIRRLYLKWHPDKNP   50 (88)
T ss_dssp             HHHHHHHHHTTS--SCSHHHHHHHHHHHHHTCTTTSS
T ss_pred             HHHHHHhCCCCC--CCHHHHHHHHHHHHHHHCCCCCC
Confidence            578999999995  99999999999999999999974

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=98.57  E-value=1.8e-08  Score=83.57  Aligned_cols=35  Identities=20%  Similarity=0.142  Sum_probs=33.2

Q ss_pred             ccchhhcCcCCCCCC-ChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENV-DVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~i-d~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||++|||++.  + +.++||++||++|++.||||+-
T Consensus        15 ~~~y~iLgv~~~--a~s~~eIk~aYr~l~~~~HPDk~~   50 (109)
T 2qsa_A           15 ENCYDVLEVNRE--EFDKQKLAKAYRALARKHHPDRVK   50 (109)
T ss_dssp             SCHHHHTTCCGG--GCCHHHHHHHHHHHHHHTCGGGCC
T ss_pred             CCHHHHcCCCCC--CCCHHHHHHHHHHHHHHHCcCCCC
Confidence            899999999996  7 9999999999999999999974

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=98.55  E-value=2.3e-08  Score=85.43  Aligned_cols=36  Identities=19%  Similarity=0.099  Sum_probs=32.5

Q ss_pred             cccchhhcCcCCCCCCCh--HHHHHHHhhhhhhcCCCccc
Q 011502          439 CTDHYSALGLSRFENVDV--SILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       439 c~D~YevLGv~r~~~id~--s~LKKeYRKkALlvHPdk~~  476 (484)
                      ..|||+||||++.  ++.  ++|||+|||+|++.||||+-
T Consensus         7 ~~~~Y~iLgv~~~--as~~~~eIk~aYr~la~~~HPDk~~   44 (114)
T 1gh6_A            7 SLQLMDLLGLERS--AWGNIPLMRKAYLKKCKEFHPDKGG   44 (114)
T ss_dssp             HHHHHHHTTCCTT--SCSCHHHHHHHHHHTTTTCCTTTCC
T ss_pred             hhhHHHHcCCCCC--CCcCHHHHHHHHHHHHHHHCCCCCc
Confidence            3699999999996  666  99999999999999999973

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=98.53  E-value=3.1e-08  Score=86.44  Aligned_cols=36  Identities=28%  Similarity=0.270  Sum_probs=33.5

Q ss_pred             cccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          439 CTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       439 c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      -.|||++|||++.  ++.++|||+|||++++.||||+-
T Consensus         9 ~~~~y~iLgv~~~--a~~~eIk~aYr~l~~~~HPDk~~   44 (155)
T 2l6l_A            9 KKDWYSILGADPS--ANISDLKQKYQKLILMYHPDKQS   44 (155)
T ss_dssp             CSHHHHHHTCCTT--CCHHHHHHHHHHHHHHHSCCCCC
T ss_pred             CCChhHhcCCCCC--CCHHHHHHHHHHHHHHHCcCCCC
Confidence            3799999999995  99999999999999999999974

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.52  E-value=3.1e-08  Score=77.34  Aligned_cols=35  Identities=17%  Similarity=0.049  Sum_probs=32.2

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCC  475 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~  475 (484)
                      .|+|+||||++. +++.++||++||++|+..|||++
T Consensus        14 ~~~y~iLgl~~~-~a~~~eIk~ayr~l~~~~HPDk~   48 (71)
T 2guz_A           14 KEALQILNLTEN-TLTKKKLKEVHRKIMLANHPDKG   48 (71)
T ss_dssp             HHHHHHTTCCTT-TCCHHHHHHHHHHHHHHHCGGGT
T ss_pred             HHHHHHcCCCCC-CCCHHHHHHHHHHHHHHHCCCCC
Confidence            489999999983 49999999999999999999995

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=98.46  E-value=4e-08  Score=90.67  Aligned_cols=44  Identities=20%  Similarity=0.337  Sum_probs=37.5

Q ss_pred             HHHHHHhcc--------ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          431 DEVVRLLNC--------TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       431 dEV~RIl~c--------~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      ++|+.+|..        .|||++|||++.  +++++|||+|||+|+++||||+-
T Consensus       100 ~niRaLLssl~~vl~~~~d~Y~vLgv~~~--As~~eIKkAYRklal~~HPDK~~  151 (182)
T 1n4c_A          100 RNIRALLSTMHTVLWAGETKWKPVGMADL--VTPEQVKKVYRKAVLVVHPDKAT  151 (182)
T ss_dssp             TCHHHHHHHGGGGSCTTCCCCCCCCGGGG--SSHHHHHHHHHHHHHHTCGGGGS
T ss_pred             HHHHHHHHHHHHHhcCccchhhcCCCCCC--CCHHHHHHHHHHHHHHHCcCcCC
Confidence            445555554        489999999996  99999999999999999999974

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.44  E-value=2.3e-08  Score=98.09  Aligned_cols=38  Identities=21%  Similarity=0.281  Sum_probs=0.0

Q ss_pred             hccccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          437 LNCTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       437 l~c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      +.-.|||++|||+++  ++.++|||+|||+|++.|||||-
T Consensus        25 m~~~d~Y~vLgv~~~--as~~eIk~aYr~la~~~HPDk~~   62 (329)
T 3lz8_A           25 MELKDYYAILGVQPT--DDLKTIKTAYRRLARKYHPDVSK   62 (329)
T ss_dssp             ----------------------------------------
T ss_pred             ccccCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCCCCCC
Confidence            344799999999995  99999999999999999999974

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=98.41  E-value=9.5e-08  Score=88.66  Aligned_cols=37  Identities=19%  Similarity=0.174  Sum_probs=34.2

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||++|||++.-.+|.++|||+|||+++++||||+-
T Consensus        43 ~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~   79 (207)
T 3bvo_A           43 RDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFS   79 (207)
T ss_dssp             CCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGT
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC
Confidence            6999999999965689999999999999999999974

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=98.08  E-value=8.1e-07  Score=91.97  Aligned_cols=35  Identities=20%  Similarity=0.251  Sum_probs=21.4

Q ss_pred             cccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcc
Q 011502          439 CTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCC  475 (484)
Q Consensus       439 c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~  475 (484)
                      +.|||++|||++.  ++.++|||+|||+|++.|||||
T Consensus        20 ~~~~y~~lg~~~~--a~~~~i~~ay~~l~~~~hpd~~   54 (780)
T 3apo_A           20 DQNFYSLLGVSKT--ASSREIRQAFKKLALKLHPDKN   54 (780)
T ss_dssp             ---CHHHHTCCTT--CCHHHHHHHHCC----------
T ss_pred             CCCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCC
Confidence            4799999999995  9999999999999999999997

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=96.98  E-value=0.0003  Score=55.36  Aligned_cols=36  Identities=3%  Similarity=0.023  Sum_probs=30.7

Q ss_pred             cchhhcCcCCCC-CCChHHHHHHHhhhhhhcCCCccc
Q 011502          441 DHYSALGLSRFE-NVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       441 D~YevLGv~r~~-~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      +.|.||||++.. .++.++||+.|||+-...||||.-
T Consensus         5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG   41 (65)
T 2guz_B            5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG   41 (65)
T ss_dssp             HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC
T ss_pred             HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC
Confidence            468899999841 279999999999999999999863

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=96.88  E-value=0.00051  Score=62.60  Aligned_cols=24  Identities=25%  Similarity=0.263  Sum_probs=22.6

Q ss_pred             CCChHHHHHHHhhhhhhcCCCccc
Q 011502          453 NVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       453 ~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .+|.++|||+||++|++.||||+-
T Consensus        29 ~a~~~eIk~aYr~la~~~HPDk~~   52 (181)
T 3uo3_A           29 TIDQSRLRKEYRQLQAQHHPDMAQ   52 (181)
T ss_dssp             CCCHHHHHHHHHHHHHTCCTTSCC
T ss_pred             CCCHHHHHHHHHHHHHHhCcCCCc
Confidence            699999999999999999999974

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=96.07  E-value=0.0044  Score=56.30  Aligned_cols=36  Identities=22%  Similarity=0.187  Sum_probs=32.7

Q ss_pred             cccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          439 CTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       439 c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      ..|+|++||+.+.  .+.+++++.|||+++..|||+.-
T Consensus       381 ~~~~y~~lg~~~~--~~~~~~~~~y~~~~l~~~pd~~~  416 (450)
T 2y4t_A          381 KRDYYKILGVKRN--AKKQEIIKAYRKLALQWHPDNFQ  416 (450)
T ss_dssp             SCCSGGGSCSSTT--CCTTHHHHHHHHHHHHSCGGGCC
T ss_pred             chhHHHHhCCCcc--CCHHHHHHHHHHHHHHhCCCCCC
Confidence            4799999999996  78999999999999999999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	484
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	98.97
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	98.92
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	98.9
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	98.83
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	98.69
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	98.66
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	98.51
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	98.25

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=98.97  E-value=1.2e-10  Score=90.38  Aligned_cols=35  Identities=17%  Similarity=0.263  Sum_probs=33.2

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||+||||++.  ++.++||++|||++++.|||||-
T Consensus         3 ~dyY~vLgv~~~--As~~eIk~aYr~l~~~~HPDk~~   37 (75)
T d1xbla_           3 QDYYEILGVSKT--AEEREIRKAYKRLAMKYHPDRNQ   37 (75)
T ss_dssp             CCTTTTTCCSSS--CCHHHHHHHHHHHHHHTCCTTCT
T ss_pred             CCHHHHcCCCCC--cCHHHHHHHHHHHHhhhhhhccC
Confidence            699999999995  99999999999999999999974

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=98.92  E-value=1.6e-10  Score=95.44  Aligned_cols=38  Identities=18%  Similarity=0.153  Sum_probs=34.1

Q ss_pred             cccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          439 CTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       439 c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      ..|||+||||+++-..|.++|||+|||+|++.|||||-
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~   44 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGG   44 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchh
Confidence            47999999999974458889999999999999999984

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=2.4e-10  Score=92.35  Aligned_cols=36  Identities=31%  Similarity=0.299  Sum_probs=33.8

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCFA  477 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~~  477 (484)
                      .|||+||||+|.  ++.++||++|||+++++|||||..
T Consensus        16 ~d~Y~iLgv~~~--as~~eIk~aY~~l~~~~HPDk~~~   51 (94)
T d1wjza_          16 KDWYSILGADPS--ANMSDLKQKYQKLILLYHPDKQSA   51 (94)
T ss_dssp             SCHHHHTTCCTT--CCHHHHHHHHHHTTSSSCSTTCCT
T ss_pred             cChHHHcCCCCC--cCHHHHHHHHHHHHHHhhhhhccc
Confidence            599999999995  999999999999999999999864

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=7.3e-10  Score=86.02  Aligned_cols=37  Identities=27%  Similarity=0.282  Sum_probs=34.1

Q ss_pred             cccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcccc
Q 011502          439 CTDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCFA  477 (484)
Q Consensus       439 c~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~~  477 (484)
                      .+|||+||||+++  ++.++||++|||++++.|||++-.
T Consensus         2 ~kdyY~iLgv~~~--as~~eIk~ay~~l~~~~hPD~~~~   38 (77)
T d1hdja_           2 GKDYYQTLGLARG--ASDEEIKRAYRRQALRYHPDKNKE   38 (77)
T ss_dssp             CCCSHHHHTCCTT--CCHHHHHHHHHHHHHTTCTTTCCC
T ss_pred             CCChHHHcCCCCC--cCHHHHHHHHHHHHHHhccccccc
Confidence            3799999999995  999999999999999999999753

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=98.69  E-value=3.1e-09  Score=81.85  Aligned_cols=37  Identities=14%  Similarity=0.104  Sum_probs=34.0

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|||++|||++.-.+|.++||++||+++.+.|||++-
T Consensus         1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~   37 (76)
T d1fpoa1           1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFA   37 (76)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGT
T ss_pred             CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccc
Confidence            4899999999976688999999999999999999964

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=98.66  E-value=3.7e-09  Score=83.94  Aligned_cols=36  Identities=17%  Similarity=0.088  Sum_probs=33.4

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCcc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCC  475 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~  475 (484)
                      .+||+||||++....|.++|||+|||+|++.||||+
T Consensus        11 ~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~   46 (79)
T d1fafa_          11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG   46 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccC
Confidence            689999999997556999999999999999999996

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=1.1e-08  Score=82.52  Aligned_cols=35  Identities=11%  Similarity=-0.166  Sum_probs=33.1

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .|+|+|||++++  ++.++|||+||++|++.||||+-
T Consensus        16 ~~~y~iL~v~~~--as~~eIKkAYrrl~~~~HPDk~~   50 (88)
T d1iura_          16 KEVTSVVEQAWK--LPESERKKIIRRLYLKWHPDKNP   50 (88)
T ss_dssp             HHHHHHHHHTTS--SCSHHHHHHHHHHHHHTCTTTSS
T ss_pred             HHHHHHhCCCCC--CCHHHHHHHHHHHHHHhcccccc
Confidence            699999999996  99999999999999999999974

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.25  E-value=8.1e-08  Score=78.18  Aligned_cols=35  Identities=20%  Similarity=0.333  Sum_probs=32.6

Q ss_pred             ccchhhcCcCCCCCCChHHHHHHHhhhhhhcCCCccc
Q 011502          440 TDHYSALGLSRFENVDVSILKREYRKKVCCLNHFCCF  476 (484)
Q Consensus       440 ~D~YevLGv~r~~~id~s~LKKeYRKkALlvHPdk~~  476 (484)
                      .++|++||+++.  +++++||++|||+++++||||+-
T Consensus        33 ~~~y~~Lgl~~~--~t~~eIk~aYr~l~~~~HPDk~~   67 (98)
T d1nz6a_          33 ETKWKPVGMADL--VTPEQVKKVYRKAVLVVHPDKAT   67 (98)
T ss_dssp             CCSCCCCCGGGC--CSHHHHHHHHHHHHHHSCHHHHT
T ss_pred             ccCCeecCCCcc--CCHHHHHHHHHHHHHHhccccCC
Confidence            479999999996  99999999999999999999975