Citrus Sinensis ID: 011630


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-
MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAKSRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVSGPISSGGPGSSSMKKTNSGPLNKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGAVHNPILLIVVLVLFAVIAAIFIWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIPV
cccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEEccccccccccccccEEEEEcccEEccccccccccccccccccccccccEEEEEEEEEEcccccEEEEEcccccccEEEEcccEEEEcccccccccHHHHHHHHccccccccccEEEEccccccccEEEEEEEEEEcccEEEEcccccccccccEEEEEccccccccEEEEEccccccccccc
cccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcccccccEEEEEEEEEcccccccccccccccEEEEEEEEEEEcccccccccccccccEEcccHHHHHEEEEEEEccccccEEEEEcccccEEEEEEcccEEEEEccccccccHHHHHHHHHccccccccEEEEEccEEEcccEEEEEEEEEEcccEEEEEccccccccccHHHHEEccccEcEEEEEEcccccccEccc
mgsrypshqlsnglfvsgrpeqpkekaptmssvampytggdikksgelgkmfdipmdsaksrksgpitgapsrtgsfagaathsgsipnaagragynvsgpissggpgsssmkktnsgplnkhgepikkssgpqsggatrqnsgpippslpatglitsgpissgplnssgaprklsgsldssgsikmnsssiaQNQAVTtitqeddysfrknfpkpVLWLVILIFVMGFIAGGFILGAVHNPILLIVVLVLFAVIAAIFIWNTCWGRKAITDfischpdtdlrtaksgqfVKVTGVvtcgnvplessfrrvprcvytstslyeyrawgskpanpkhrhftwglrsLERHVVDFYISDFQSGLRALVKtgsgarvtpfvddsvvidikpenkdlspEFIRWLGQKSLSSDDRLMRLKegyikegstvSVMGIVqrndnvlmivpppepiatgwqwtkcifpaSLEGIILRcedtsnndvipv
mgsrypshqlsnglfvsgRPEQPkekaptmssvampytggdikksgelGKMFDIPMDSAKSRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVSGPISSGGPGSSSMKKTNsgplnkhgepikkssgpqsGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLDSSGSIKMnsssiaqnqavTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGAVHNPILLIVVLVLFAVIAAIFIWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTcgnvplessfrrvprcvYTSTSLYeyrawgskpanpkHRHFTWGLRSLERHVVDFYISDFQSGLRALVKtgsgarvtpfvddsvvidikpenkdlspefirwlgqkslssddrLMRLKegyikegstvsvMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILrcedtsnndvipv
MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAKSRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVsgpissggpgsssMKKTNSGPLNKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLDssgsikmnsssIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGAVHNPillivvlvlfaviaaifiWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIPV
*******************************************************************************************************************************************************************************************************TITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGAVHNPILLIVVLVLFAVIAAIFIWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSL***DRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCE**********
******************************************************************************************************************************************************************************************************************KNFPKPVLWLVILIFVMGFIAGGFILGAVHNPILLIVVLVLFAVIAAIFIWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTS***VIPV
MGSRYPSHQLSNGLFVSGR***********SSVAMPYTGGDIKKSGELGKMFDIPMDSAKSRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVSGPI****************PLNKHGEPI****************GPIPPSLPATGLITSGPISSG*****************************QNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGAVHNPILLIVVLVLFAVIAAIFIWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIPV
************************************************GKMFD*********************************************************************************************PPSLPATGLITS*PIS********************************NQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGAVHNPILLIVVLVLFAVIAAIFIWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDV***
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MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAKSRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVSGPISSGGPGSSSMKKTNSGPLNKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGAVHNPILLIVVLVLFAVIAAIFIWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIPV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query481 2.2.26 [Sep-21-2011]
Q9FZ45474 Uncharacterized membrane yes no 0.985 1.0 0.775 0.0
>sp|Q9FZ45|Y1686_ARATH Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana GN=At1g16860 PE=1 SV=1 Back     alignment and function desciption
 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/481 (77%), Positives = 418/481 (86%), Gaps = 7/481 (1%)

Query: 1   MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
           MGSRYPSHQLSNGLFVSGRPEQPKE+APTMS+VAMPYTGGDIK+SGELGKMFDIP D  K
Sbjct: 1   MGSRYPSHQLSNGLFVSGRPEQPKERAPTMSAVAMPYTGGDIKRSGELGKMFDIPADGTK 60

Query: 61  SRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVSGPISSGGPGSSSMKKTNSGPL 120
           SRKSGPI GAPSR+GSFAG A      P A GR    +SG ++S G  S SMKKTNSGPL
Sbjct: 61  SRKSGPIPGAPSRSGSFAGTAQSGPGAPMATGR----MSGSLASAG--SVSMKKTNSGPL 114

Query: 121 NKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLD 180
           +KHGEP+KKSSGPQSGG TRQNSG IP  LPATGLITSGPI+SGPLNSSGAPRK+SG LD
Sbjct: 115 SKHGEPLKKSSGPQSGGVTRQNSGSIP-ILPATGLITSGPITSGPLNSSGAPRKVSGPLD 173

Query: 181 SSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGAVH 240
           SSG +K +  ++  NQAVTT+  EDD+S  K+FPKPVLWLV+LIF+MGF+AGGFILGAVH
Sbjct: 174 SSGLMKSHMPTVVHNQAVTTLGPEDDFSCLKSFPKPVLWLVVLIFIMGFLAGGFILGAVH 233

Query: 241 NPILLIVVLVLFAVIAAIFIWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCG 300
           NPILL+VV +LF V+AA+FIWN CWGR+ ITDFI+ +PD DLRTAK+GQ VKVTGVVTCG
Sbjct: 234 NPILLVVVAILFTVVAALFIWNICWGRRGITDFIARYPDADLRTAKNGQHVKVTGVVTCG 293

Query: 301 NVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQS 360
           NVPLESSF RVPRCVYTST LYEYR WGSKPAN  HRHFTWGLRS ERHVVDFYISDFQS
Sbjct: 294 NVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANSSHRHFTWGLRSSERHVVDFYISDFQS 353

Query: 361 GLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYI 420
           GLRALVKTGSGA+VTP VDDSVVID K  ++ +SP+F+RWLG+K+L+SDDR+MRLKEGYI
Sbjct: 354 GLRALVKTGSGAKVTPLVDDSVVIDFKQGSEQVSPDFVRWLGKKNLTSDDRIMRLKEGYI 413

Query: 421 KEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIP 480
           KEGSTVSV+G+VQRNDNVLMIVP  EP+A GWQW +C FP SLEGI+LRCED+SN D IP
Sbjct: 414 KEGSTVSVIGVVQRNDNVLMIVPSSEPLAAGWQWRRCTFPTSLEGIVLRCEDSSNVDAIP 473

Query: 481 V 481
           V
Sbjct: 474 V 474





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query481
356526336487 PREDICTED: uncharacterized membrane prot 0.989 0.977 0.797 0.0
356521668483 PREDICTED: uncharacterized membrane prot 0.989 0.985 0.801 0.0
224097428485 predicted protein [Populus trichocarpa] 1.0 0.991 0.785 0.0
224113259485 predicted protein [Populus trichocarpa] 1.0 0.991 0.781 0.0
224097426483 predicted protein [Populus trichocarpa] 1.0 0.995 0.807 0.0
225445951481 PREDICTED: uncharacterized membrane prot 0.991 0.991 0.771 0.0
255544532486 conserved hypothetical protein [Ricinus 1.0 0.989 0.783 0.0
356526298485 PREDICTED: uncharacterized membrane prot 0.997 0.989 0.769 0.0
356523113484 PREDICTED: uncharacterized membrane prot 0.995 0.989 0.765 0.0
449453354483 PREDICTED: uncharacterized membrane prot 1.0 0.995 0.784 0.0
>gi|356526336|ref|XP_003531774.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Glycine max] Back     alignment and taxonomy information
 Score =  798 bits (2060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/483 (79%), Positives = 431/483 (89%), Gaps = 7/483 (1%)

Query: 1   MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
           MGSR+PSHQLSNGL+VSGRPEQPKEK PTMSSVAMPYTGGDIK+SGELGKMFDIPMD +K
Sbjct: 1   MGSRFPSHQLSNGLYVSGRPEQPKEKTPTMSSVAMPYTGGDIKRSGELGKMFDIPMDGSK 60

Query: 61  SRKSGPITGAPSRTGSFAGAATHSGSI-PNAAGRAGYNVSGPISSGG-PGSSSMKKTNSG 118
           SRKSGPI+ APSRTGSFAGAA+HSG I  NAA R+ Y  SG +S+GG   S+SMKKTNSG
Sbjct: 61  SRKSGPISNAPSRTGSFAGAASHSGPIMQNAAARSAYITSGNVSTGGMSASASMKKTNSG 120

Query: 119 PLNKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGS 178
           PLNKHGEP+KKSSGPQSGG TRQNSGPIPP LP TGLITSGP     LNSSGAPRK+SG 
Sbjct: 121 PLNKHGEPVKKSSGPQSGGVTRQNSGPIPPVLPTTGLITSGP-----LNSSGAPRKVSGQ 175

Query: 179 LDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGA 238
           LDS+GS+K +SS +A N AVTT++ +D+YSFR+NFPKP+LW VILIFVMGFIAGGFILGA
Sbjct: 176 LDSTGSMKSHSSFVAHNPAVTTLSLDDEYSFRRNFPKPILWSVILIFVMGFIAGGFILGA 235

Query: 239 VHNPILLIVVLVLFAVIAAIFIWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVT 298
           V N ILLIVV++LF  +AA+F WN+C+GRKAI  FIS +PD +LRTAK+GQFVKV+GVVT
Sbjct: 236 VRNAILLIVVVILFGAVAALFTWNSCFGRKAIVGFISRYPDAELRTAKNGQFVKVSGVVT 295

Query: 299 CGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDF 358
           CGNVPLESSF++VPRCVYTSTSLYEYR W SK ANPKHR FTWGLR+ ERHVVDFYISDF
Sbjct: 296 CGNVPLESSFQKVPRCVYTSTSLYEYRGWDSKAANPKHRRFTWGLRAAERHVVDFYISDF 355

Query: 359 QSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEG 418
           QSGLRALVKTG GARVTP+VDDSVVID+ P NKD+SPEF+RWLG++ LSSDDR+M+LKEG
Sbjct: 356 QSGLRALVKTGYGARVTPYVDDSVVIDVNPANKDMSPEFLRWLGERKLSSDDRIMQLKEG 415

Query: 419 YIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDV 478
           YIKEGSTVSVMG+VQRNDNVLMIVPPPEP+ TG QW KCIFPASLEGI+LRCEDTS  DV
Sbjct: 416 YIKEGSTVSVMGVVQRNDNVLMIVPPPEPLTTGCQWAKCIFPASLEGIVLRCEDTSKIDV 475

Query: 479 IPV 481
           IPV
Sbjct: 476 IPV 478




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521668|ref|XP_003529475.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Glycine max] Back     alignment and taxonomy information
>gi|224097428|ref|XP_002310930.1| predicted protein [Populus trichocarpa] gi|222850750|gb|EEE88297.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224113259|ref|XP_002316439.1| predicted protein [Populus trichocarpa] gi|222865479|gb|EEF02610.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224097426|ref|XP_002310929.1| predicted protein [Populus trichocarpa] gi|222850749|gb|EEE88296.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225445951|ref|XP_002264547.1| PREDICTED: uncharacterized membrane protein At1g16860 [Vitis vinifera] gi|147844463|emb|CAN82086.1| hypothetical protein VITISV_031055 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255544532|ref|XP_002513327.1| conserved hypothetical protein [Ricinus communis] gi|223547235|gb|EEF48730.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356526298|ref|XP_003531755.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Glycine max] Back     alignment and taxonomy information
>gi|356523113|ref|XP_003530186.1| PREDICTED: uncharacterized membrane protein At1g16860 [Glycine max] Back     alignment and taxonomy information
>gi|449453354|ref|XP_004144423.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query481
TAIR|locus:2015646474 AT1G16860 [Arabidopsis thalian 0.985 1.0 0.729 4.1e-191
TAIR|locus:2037533468 AT1G78880 "AT1G78880" [Arabido 0.972 1.0 0.725 7.1e-187
TAIR|locus:2132075445 AT4G22290 "AT4G22290" [Arabido 0.715 0.773 0.511 1.2e-90
TAIR|locus:2015646 AT1G16860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1852 (657.0 bits), Expect = 4.1e-191, P = 4.1e-191
 Identities = 351/481 (72%), Positives = 388/481 (80%)

Query:     1 MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
             MGSRYPSHQLSNGLFVSGRPEQPKE+APTMS+VAMPYTGGDIK+SGELGKMFDIP D  K
Sbjct:     1 MGSRYPSHQLSNGLFVSGRPEQPKERAPTMSAVAMPYTGGDIKRSGELGKMFDIPADGTK 60

Query:    61 SRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVXXXXXXXXXXXXXMKKTNSGPL 120
             SRKSGPI GAPSR+GSFAG A      P A GR   ++             MKKTNSGPL
Sbjct:    61 SRKSGPIPGAPSRSGSFAGTAQSGPGAPMATGRMSGSLASAGSVS------MKKTNSGPL 114

Query:   121 NKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLD 180
             +KHGEP+KKSSGPQSGG TRQNSG IP  LPATGLITSGPI+SGPLNSSGAPRK+SG LD
Sbjct:   115 SKHGEPLKKSSGPQSGGVTRQNSGSIP-ILPATGLITSGPITSGPLNSSGAPRKVSGPLD 173

Query:   181 XXXXXXXXXXXIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGAVH 240
                        +  NQAVTT+  EDD+S  K+FPKPVLWLV+LIF+MGF+AGGFILGAVH
Sbjct:   174 SSGLMKSHMPTVVHNQAVTTLGPEDDFSCLKSFPKPVLWLVVLIFIMGFLAGGFILGAVH 233

Query:   241 NPXXXXXXXXXXXXXXXXXXWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCG 300
             NP                  WN CWGR+ ITDFI+ +PD DLRTAK+GQ VKVTGVVTCG
Sbjct:   234 NPILLVVVAILFTVVAALFIWNICWGRRGITDFIARYPDADLRTAKNGQHVKVTGVVTCG 293

Query:   301 NVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQS 360
             NVPLESSF RVPRCVYTST LYEYR WGSKPAN  HRHFTWGLRS ERHVVDFYISDFQS
Sbjct:   294 NVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANSSHRHFTWGLRSSERHVVDFYISDFQS 353

Query:   361 GLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYI 420
             GLRALVKTGSGA+VTP VDDSVVID K  ++ +SP+F+RWLG+K+L+SDDR+MRLKEGYI
Sbjct:   354 GLRALVKTGSGAKVTPLVDDSVVIDFKQGSEQVSPDFVRWLGKKNLTSDDRIMRLKEGYI 413

Query:   421 KEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIP 480
             KEGSTVSV+G+VQRNDNVLMIVP  EP+A GWQW +C FP SLEGI+LRCED+SN D IP
Sbjct:   414 KEGSTVSVIGVVQRNDNVLMIVPSSEPLAAGWQWRRCTFPTSLEGIVLRCEDSSNVDAIP 473

Query:   481 V 481
             V
Sbjct:   474 V 474




GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2037533 AT1G78880 "AT1G78880" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132075 AT4G22290 "AT4G22290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FZ45Y1686_ARATHNo assigned EC number0.77540.98541.0yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 481
PF12483160 GIDE: E3 Ubiquitin ligase; InterPro: IPR022170 Thi 99.12
PF13829224 DUF4191: Domain of unknown function (DUF4191) 93.08
PF13567176 DUF4131: Domain of unknown function (DUF4131) 88.59
>PF12483 GIDE: E3 Ubiquitin ligase; InterPro: IPR022170 This domain family is found in bacteria, archaea and eukaryotes, and is typically between 150 and 163 amino acids in length Back     alignment and domain information
Probab=99.12  E-value=4.9e-10  Score=101.39  Aligned_cols=103  Identities=23%  Similarity=0.402  Sum_probs=71.4

Q ss_pred             ceeeeeeeeeeeeeeEEEEeCCCceeEEE-ecCCCceeeeeeecceEEc-CCCCCCCCCHHHHHhhhhcCCCCCCceeEE
Q 011630          338 HFTWGLRSLERHVVDFYISDFQSGLRALV-KTGSGARVTPFVDDSVVID-IKPENKDLSPEFIRWLGQKSLSSDDRLMRL  415 (481)
Q Consensus       338 r~~W~l~~~Er~~~dFyIsD~~sG~RALV-kaG~GarVtP~Iees~VvD-~~~~~kd~S~el~~wL~~rnLSsd~r~mRy  415 (481)
                      ...|++++.++..++|||.|.+ | +.+| ....++.+.-    .++.| +.+........+..|+...- ..+.+.+||
T Consensus        16 ~~~~~~v~~~~~~vPF~L~D~t-g-~v~V~~~p~~a~l~l----~~v~~~f~p~~~~~~~~~~~~~~~~~-~~~~~G~r~   88 (160)
T PF12483_consen   16 SSSWRTVSSGTSEVPFYLEDGT-G-RVRVVDDPEGAELDL----ETVYDRFEPSPSSPPDGLFGFFSGER-ELEPKGYRY   88 (160)
T ss_pred             cccEEEEEcceeEcCEEEECCc-e-EEEEecCcccCccce----eeEEEEeEECCCCccceeeeeeccce-eccccccEE
Confidence            4569999999999999999975 4 6666 4455665533    34444 22222223333333333222 112677999


Q ss_pred             EeeeecCCCEEEEEEEE-EecCceeeEeCCCCc
Q 011630          416 KEGYIKEGSTVSVMGIV-QRNDNVLMIVPPPEP  447 (481)
Q Consensus       416 kEgiI~eGs~VsViGvv-~r~~~vlmI~pP~E~  447 (481)
                      +|++|++|++|+|+|.+ .++++.++|.+|.+.
T Consensus        89 ~E~~L~~G~~ltvvGe~~~~~~g~~~i~~p~~g  121 (160)
T PF12483_consen   89 TEEILPVGTPLTVVGELVRDGDGNLVIQPPKDG  121 (160)
T ss_pred             EEEEcCCCCEEEEEEEEEEcCCCcEEEeCCCCC
Confidence            99999999999999999 667789999999886



There is a single completely conserved residue E that may be functionally important. GIDE is an E3 ubiquitin ligase which is involved in inducing apoptosis. ; GO: 0016881 acid-amino acid ligase activity

>PF13829 DUF4191: Domain of unknown function (DUF4191) Back     alignment and domain information
>PF13567 DUF4131: Domain of unknown function (DUF4131) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00