Citrus Sinensis ID: 011811


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------
MADLGAKWKILRSVMMIFLNFALAFVCVKAERGLKIETLRFNGTERQDSNYLLKAVNFLWQPEGSGYHHVWPELKFGWEIVLGTIIGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISKCMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTVLLIVLFIGTSTKAFLKGVETWKRETILKKEAARCLGSNGAGAGEVEYKSLPSGPRSGPQKDAMEPEVTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPVSLVVSLYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCAFGVLAGIVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFHRHEYMGFENLCKYDR
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHcccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccccccccccHHHEEHHHHHHHHHHHHHHHHcccHHHHHcHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
MADLGAKWKILRSVMMIFLNFALAFVCVKAErglkietlrfngterqdsnyLLKAVNflwqpegsgyhhvwpelkfgWEIVLGTIIGFFGaafgsvggvggggiFVPMLSliigfdpksatAISKCMIMGAAVSTVYYNLklrhptldmpiiDYDLALLIQPMLMLGISIGVAFNVIFADWMVTVLLIVLFIGTSTKAFLKGVETWKRETILKKEAARClgsngagageveykslpsgprsgpqkdamepevtileninwkELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPVSLVVSLYEAISLYKGRrviaskgddgksfRVFQLVSYCAFGVLAGIVGGllglgggfimgplflelgvppqvssataTFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFILAFMIFVSAISlggvgisnmigkfhrheymgfenlckydr
madlgakwKILRSVMMIFLNFALAFVCVKAERGLKIetlrfngterqdsnYLLKAVNFLWQPEGSGYHHVWPELKFGWEIVLGTIIGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISKCMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTVLLIVLFIGTSTKAFLKGVETWKRETILKKEAARCLGSNGAGAGEVEYKSLPSGPRSGPQKDAMEPEVTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPVSLVVSLYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCAFGVLAGIVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFhrheymgfenlckydr
MADLGAKWKILRSVMMIFLNFALAFVCVKAERGLKIETLRFNGTERQDSNYLLKAVNFLWQPEGSGYHHVWPELKFGWEIVLgtiigffgaafgsvggvggggifvPMLSLIIGFDPKSATAISKCMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTVLLIVLFIGTSTKAFLKGVETWKRETILKKEAARCLGSNGAGAGEVEYKSLPSGPRSGPQKDAMEPEVTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPVSLVVSLYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCafgvlagivggllglgggfiMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFHRHEYMGFENLCKYDR
****GAKWKILRSVMMIFLNFALAFVCVKAERGLKIETLRFNGTERQDSNYLLKAVNFLWQPEGSGYHHVWPELKFGWEIVLGTIIGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISKCMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTVLLIVLFIGTSTKAFLKGVETWKRETILKKEAARCLG******************************VTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPVSLVVSLYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCAFGVLAGIVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFHRHEYMGFENLCKY**
*********ILRSVMMIFLNFALAFVCVKAE********************LLKAVNFLWQPEGSGYHHVWPELKFGWEIVLGTIIGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISKCMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTVLLIVLFIGTSTKAFLKGVETW************************************************LENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPVSLVVSLYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCAFGVLAGIVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFHRHEYMGFENLC****
MADLGAKWKILRSVMMIFLNFALAFVCVKAERGLKIETLRFNGTERQDSNYLLKAVNFLWQPEGSGYHHVWPELKFGWEIVLGTIIGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISKCMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTVLLIVLFIGTSTKAFLKGVETWKRETILKKEAARCLGSNGAGAGEVEYKS*************MEPEVTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPVSLVVSLYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCAFGVLAGIVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFHRHEYMGFENLCKYDR
**DLGAKWKILRSVMMIFLNFALAFVCVKAERGLKIET****GTERQDSNYLLKAVNFLWQPEGSGYHHVWPELKFGWEIVLGTIIGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISKCMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTVLLIVLFIGTSTKAFLKGVETWKRETILKKEA*****************************DAMEPEVTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPVSLVVSLYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCAFGVLAGIVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFHRHEYMGFENLCKYDR
oooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
ooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
oooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
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MADLGAKWKILRSVMMIFLNFALAFVCVKAERGLKIETLRFNGTERQDSNYLLKAVNFLWQPEGSGYHHVWPELKFGWEIVLGTIIGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISKCMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTVLLIVLFIGTSTKAFLKGVETWKRETILKKEAARCLGSNGAGAGEVEYKSLPSGPRSGPQKDAMEPEVTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPVSLVVSLYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCAFGVLAGIVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFHRHEYMGFENLCKYDR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query477
224092328479 predicted protein [Populus trichocarpa] 0.997 0.993 0.797 0.0
255551046476 conserved hypothetical protein [Ricinus 0.985 0.987 0.796 0.0
297821995479 hypothetical protein ARALYDRAFT_481426 [ 0.993 0.989 0.757 0.0
225430021478 PREDICTED: uncharacterized protein LOC10 0.989 0.987 0.771 0.0
30682879476 Sulfite exporter TauE/SafE family protei 0.993 0.995 0.747 0.0
224143013448 predicted protein [Populus trichocarpa] 0.935 0.995 0.801 0.0
356510003472 PREDICTED: uncharacterized protein LOC10 0.979 0.989 0.736 0.0
356518316477 PREDICTED: uncharacterized protein LOC10 0.987 0.987 0.726 0.0
358344801470 hypothetical protein MTR_042s0018 [Medic 0.960 0.974 0.727 0.0
225442593481 PREDICTED: uncharacterized protein LOC10 0.997 0.989 0.731 1e-180
>gi|224092328|ref|XP_002309560.1| predicted protein [Populus trichocarpa] gi|222855536|gb|EEE93083.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/478 (79%), Positives = 426/478 (89%), Gaps = 2/478 (0%)

Query: 1   MADLGAKWKILRSVMMIFLNFALAFVCVKAERGLKIE--TLRFNGTERQDSNYLLKAVNF 58
           MA+ G KW+ LRSV+M+ LNF LAFV V AERGLK E  + R N T    S+Y+LKAVNF
Sbjct: 1   MAEFGGKWRGLRSVLMVLLNFLLAFVFVSAERGLKHEATSTRMNETGDSVSSYVLKAVNF 60

Query: 59  LWQPEGSGYHHVWPELKFGWEIVLGTIIGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPK 118
           LWQP+  GY HVWPE+KFGW+IVLG+IIGFFGAAFGSVGGVGGGGIFVPMLSL+IGFDPK
Sbjct: 61  LWQPDHKGYQHVWPEMKFGWQIVLGSIIGFFGAAFGSVGGVGGGGIFVPMLSLVIGFDPK 120

Query: 119 SATAISKCMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIF 178
           SATAISKCMIMGAA+STVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNV+F
Sbjct: 121 SATAISKCMIMGAAISTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVVF 180

Query: 179 ADWMVTVLLIVLFIGTSTKAFLKGVETWKRETILKKEAARCLGSNGAGAGEVEYKSLPSG 238
           ADWMVTVLLI+LF+GTSTKAFLKGVETWK+ETI+K+EAA+ L S+GA AGEVEYK LP G
Sbjct: 181 ADWMVTVLLIILFLGTSTKAFLKGVETWKKETIMKREAAKRLESDGASAGEVEYKPLPGG 240

Query: 239 PRSGPQKDAMEPEVTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQI 298
           P + PQK   E EV+ILEN+ WKELGLLVFVWVAFL LQI K  T++CS  YWVL+LLQI
Sbjct: 241 PSNSPQKADKEEEVSILENVYWKELGLLVFVWVAFLVLQITKEGTSTCSTTYWVLNLLQI 300

Query: 299 PVSLVVSLYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCAFGVLAGIVGGLLGLGGGFI 358
           PVS+ VS+YEA+SLYKG R+IASKG +G +F + QLV YC FG+LAG+VGGLLGLGGGFI
Sbjct: 301 PVSVGVSMYEAVSLYKGHRIIASKGTEGTNFTILQLVIYCLFGILAGVVGGLLGLGGGFI 360

Query: 359 MGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQ 418
           MGPLFLELG+PPQVSSATATFAMTFSSSMSVVEYYLLKRFPV YA+YFVAVAT AAF+GQ
Sbjct: 361 MGPLFLELGIPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVSYAVYFVAVATFAAFIGQ 420

Query: 419 HVVRKLIILLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFHRHEYMGFENLCKYD 476
           H+VR+LII+ GRASLIIFILA  IF+SAISLGGVG++NMIGK HRHEYMGFENLCKYD
Sbjct: 421 HIVRRLIIVFGRASLIIFILASTIFISAISLGGVGVANMIGKIHRHEYMGFENLCKYD 478




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551046|ref|XP_002516571.1| conserved hypothetical protein [Ricinus communis] gi|223544391|gb|EEF45912.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|297821995|ref|XP_002878880.1| hypothetical protein ARALYDRAFT_481426 [Arabidopsis lyrata subsp. lyrata] gi|297324719|gb|EFH55139.1| hypothetical protein ARALYDRAFT_481426 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225430021|ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267889 [Vitis vinifera] gi|296081886|emb|CBI20891.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|30682879|ref|NP_850068.1| Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] gi|22531098|gb|AAM97053.1| unknown protein [Arabidopsis thaliana] gi|25083770|gb|AAN72117.1| unknown protein [Arabidopsis thaliana] gi|26450521|dbj|BAC42374.1| unknown protein [Arabidopsis thaliana] gi|28951043|gb|AAO63445.1| At2g25737 [Arabidopsis thaliana] gi|330252652|gb|AEC07746.1| Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224143013|ref|XP_002324818.1| predicted protein [Populus trichocarpa] gi|222866252|gb|EEF03383.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356510003|ref|XP_003523730.1| PREDICTED: uncharacterized protein LOC100809318 [Glycine max] Back     alignment and taxonomy information
>gi|356518316|ref|XP_003527825.1| PREDICTED: uncharacterized protein LOC100810784 [Glycine max] Back     alignment and taxonomy information
>gi|358344801|ref|XP_003636475.1| hypothetical protein MTR_042s0018 [Medicago truncatula] gi|355502410|gb|AES83613.1| hypothetical protein MTR_042s0018 [Medicago truncatula] Back     alignment and taxonomy information
>gi|225442593|ref|XP_002284423.1| PREDICTED: uncharacterized protein LOC100266912 [Vitis vinifera] gi|297743252|emb|CBI36119.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query477
TAIR|locus:504956017476 AT2G25737 [Arabidopsis thalian 0.993 0.995 0.665 9.3e-162
TAIR|locus:2040605459 AT2G36630 [Arabidopsis thalian 0.530 0.551 0.446 5.4e-94
TAIR|locus:2127343449 AT4G21250 "AT4G21250" [Arabido 0.740 0.786 0.282 1.3e-38
TAIR|locus:2200061367 AT1G11540 "AT1G11540" [Arabido 0.740 0.961 0.298 2.6e-38
TAIR|locus:2195773458 AT1G61740 [Arabidopsis thalian 0.402 0.419 0.282 1.5e-34
DICTYBASE|DDB_G0269644549 DDB_G0269644 [Dictyostelium di 0.758 0.659 0.239 1.5e-26
TAIR|locus:2127348393 AT4G21260 "AT4G21260" [Arabido 0.222 0.269 0.348 3.8e-26
TAIR|locus:504956017 AT2G25737 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1575 (559.5 bits), Expect = 9.3e-162, P = 9.3e-162
 Identities = 316/475 (66%), Positives = 358/475 (75%)

Query:     1 MADLGAKWKILRSVMMIFLNFALAFVCVKAERGLKIETLRFNGTERQDSNYLLKAVNFLW 60
             M  L +KW  LRSV +  +NF+LAF  V AER  K   L  + T   +S++ LKA+NFLW
Sbjct:     1 MTKLRSKWLGLRSVTIFLINFSLAFAFVSAERRGKSLRLSTDETRENESSFFLKAINFLW 60

Query:    61 QPEGSGYHHVWPELKFGWEIVLXXXXXXXXXXXXXXXXXXXXXXXXPMLSLIIGFDPKSA 120
             + +  GY HVWPE +F W+IVL                        PMLSLIIGFDPKSA
Sbjct:    61 ESDQIGYRHVWPEFEFNWQIVLGTLVGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSA 120

Query:   121 TAISKCMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFAD 180
             TAISKCMIMGA+VSTVYYNL+LRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIF D
Sbjct:   121 TAISKCMIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFPD 180

Query:   181 WMVTVLLIVLFIGTSTKAFLKGVETWKRETILKKEAARCLGSNGAGAGEVEYKSLPSGPR 240
             W+VTVLLIVLF+GTSTKAFLKG ETW +ETI KKEAA+ L SNG    EVEY  LP+ P 
Sbjct:   181 WLVTVLLIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLESNGVSGTEVEYVPLPAAPS 240

Query:   241 SGPQKDAMEPEVTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPV 300
             + P     E EV+I+EN+ WKELGLLVFVW+ FL LQI+K + A+CS+ YWV++LLQIPV
Sbjct:   241 TNPGNKKKE-EVSIIENVYWKELGLLVFVWIVFLALQISKQNLANCSVAYWVINLLQIPV 299

Query:   301 SLVVSLYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCXXXXXXXXXXXXXXXXXXXXMG 360
             ++ VS YEA++LY+GRR+IASKG    +F V QLV YC                    MG
Sbjct:   300 AVGVSGYEAVALYQGRRIIASKGQGDSNFTVGQLVMYCTFGIIAGIVGGLLGLGGGFIMG 359

Query:   361 PLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQHV 420
             PLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALY V VATIAA+VGQHV
Sbjct:   360 PLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLVGVATIAAWVGQHV 419

Query:   421 VRKLIILLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFHRHEYMGFENLCKY 475
             VR+LI  +GRASLIIFILA MIF+SAISLGGVGI NMIGK  RHEYMGFENLCKY
Sbjct:   420 VRRLIAAIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHEYMGFENLCKY 474




GO:0009507 "chloroplast" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
TAIR|locus:2040605 AT2G36630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127343 AT4G21250 "AT4G21250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200061 AT1G11540 "AT1G11540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195773 AT1G61740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269644 DDB_G0269644 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2127348 AT4G21260 "AT4G21260" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query477
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 8e-10
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 3e-08
COG0730 258 COG0730, COG0730, Predicted permeases [General fun 9e-08
COG0730258 COG0730, COG0730, Predicted permeases [General fun 3e-06
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 4e-06
COG0730258 COG0730, COG0730, Predicted permeases [General fun 6e-05
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 0.001
>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information
 Score = 58.7 bits (143), Expect = 8e-10
 Identities = 26/108 (24%), Positives = 45/108 (41%)

Query: 337 YCAFGVLAGIVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLK 396
               G+LAG + GL G GGG I  PL L L  PP V+  T+  A+  +S    + +    
Sbjct: 1   LLLAGLLAGFLAGLAGFGGGLIAVPLLLLLLGPPHVAVGTSLLAVIATSLSGALAHRRRG 60

Query: 397 RFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFILAFMIFV 444
                  L  +    + A +G  ++  L   + +    + +L   + +
Sbjct: 61  NVDWRLLLRLLLGGLLGALLGALLLLLLPGAVLKLLFGVLLLLAALLM 108


This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81. Length = 236

>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information
>gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] Back     alignment and domain information
>gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] Back     alignment and domain information
>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information
>gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] Back     alignment and domain information
>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 477
PRK10621266 hypothetical protein; Provisional 99.96
COG0730258 Predicted permeases [General function prediction o 99.95
PF01925240 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 99.94
PRK10621 266 hypothetical protein; Provisional 99.26
COG0730 258 Predicted permeases [General function prediction o 99.23
PF01925240 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 98.99
PF04018257 DUF368: Domain of unknown function (DUF368); Inter 96.23
PF02673259 BacA: Bacitracin resistance protein BacA; InterPro 88.86
>PRK10621 hypothetical protein; Provisional Back     alignment and domain information
Probab=99.96  E-value=1.1e-26  Score=230.88  Aligned_cols=233  Identities=19%  Similarity=0.214  Sum_probs=196.3

Q ss_pred             HHHHHHHHHHHHHHHhhhcCcccchhchHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccHHHH
Q 011811           78 WEIVLGTIIGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISKCMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLA  157 (477)
Q Consensus        78 ~~ili~~iiG~lag~i~~v~GiGGG~i~vP~L~~~~g~~~~~Avats~~~i~~~s~~~~~~~~~~~~p~~~~plId~~l~  157 (477)
                      +..++.+++|+++|++++..| |||.+.+|+|.. +|+||++|+++|.+.++.+++++.+.|.|++|       +||+..
T Consensus        10 ~~~~~l~~~g~~aG~l~gl~G-GGg~i~vP~L~~-~g~~~~~Av~tsl~~~~~~~~~~~~~~~~~~~-------v~~~~~   80 (266)
T PRK10621         10 LLLGVLFFVAMLAGFIDSIAG-GGGLLTIPALLA-AGMSPAQALATNKLQACGGSFSASLYFIRRKV-------VNLADQ   80 (266)
T ss_pred             HHHHHHHHHHHHHHHHhhhcc-ccHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------CCHHHH
Confidence            345667778888899999999 999999999974 79999999999999999999999999999998       999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhHhHHHHhhhhCCCCCCCCccccccCCC
Q 011811          158 LLIQPMLMLGISIGVAFNVIFADWMVTVLLIVLFIGTSTKAFLKGVETWKRETILKKEAARCLGSNGAGAGEVEYKSLPS  237 (477)
Q Consensus       158 l~l~~~~ilG~~iGa~l~~~lp~~~l~~l~~i~l~~~~~~~~~kg~~~~kke~~~~~~~~~~~~~~~~~~~~~~~~~l~~  237 (477)
                      ..+.+++++|+.+|+++..++|++.++.+++++++..+.+++++.    +++   +++                 +    
T Consensus        81 ~~l~~~~l~Ga~~G~~l~~~l~~~~l~~~~~~~ll~~~~~~l~~~----~~~---~~~-----------------~----  132 (266)
T PRK10621         81 KLNIAMTFVGSMSGALLVQYVQADILRQILPILVIGIGLYFLLMP----KLG---EED-----------------R----  132 (266)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC----ccc---ccc-----------------c----
Confidence            999999999999999999999999999999999888877655331    000   000                 0    


Q ss_pred             CCCCCCCCCCCChhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHhhhhhHHHHHHHHHHHHhhhccc
Q 011811          238 GPRSGPQKDAMEPEVTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPVSLVVSLYEAISLYKGRR  317 (477)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~v~~~~~~~~~~k~~~~~cs~~yw~~~~~~~pv~~~v~~~~~~~~~~~~~  317 (477)
                                 ++        +++                                                        
T Consensus       133 -----------~~--------~~~--------------------------------------------------------  137 (266)
T PRK10621        133 -----------QR--------RLY--------------------------------------------------------  137 (266)
T ss_pred             -----------cc--------ccc--------------------------------------------------------
Confidence                       00        000                                                        


Q ss_pred             ccccCCCCCCchhhhHHHHHHHHHHHHHHHHhhcccchhHHHHHHH-HhcCCChHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 011811          318 VIASKGDDGKSFRVFQLVSYCAFGVLAGIVGGLLGLGGGFIMGPLF-LELGVPPQVSSATATFAMTFSSSMSVVEYYLLK  396 (477)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~G~~aG~isGllGiGGG~i~~PlL-l~~Gi~~~~A~ATs~~~~~f~s~~s~i~y~~~G  396 (477)
                                     +.......|+++|+++|++|+|||.+++|.+ ...++|++++++|+.+..+.++..+...|...|
T Consensus       138 ---------------~~~~~~~~G~~~G~lsG~~G~GgG~~~v~~l~~~~~~~~~~a~~ts~~~~~~~~~~~~~~~~~~G  202 (266)
T PRK10621        138 ---------------GLPFALIAGGCVGFYDGFFGPGAGSFYALAFVTLCGFNLAKATAHAKVLNATSNIGGLLLFILGG  202 (266)
T ss_pred             ---------------chHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence                           0001234789999999999999999999877 677999999999999999999999999999999


Q ss_pred             CcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 011811          397 RFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFI  437 (477)
Q Consensus       397 ~i~~~~~l~l~~~sliGa~lG~~l~~~i~~~~~r~~liv~i  437 (477)
                      .+||..++.+.+++++|+++|+++.+|++++.+|+.+..++
T Consensus       203 ~v~~~~~l~l~~g~~~G~~lG~~l~~~~~~~~lr~~~~~ll  243 (266)
T PRK10621        203 KVIWATGFVMLVGQFLGARLGARLVLSKGQKLIRPMIVIVS  243 (266)
T ss_pred             eehHHHHHHHHHHHHHHHHHHHHHHHHcCchHhHHHHHHHH
Confidence            99999999999999999999999999999999999665433



>COG0730 Predicted permeases [General function prediction only] Back     alignment and domain information
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised Back     alignment and domain information
>PRK10621 hypothetical protein; Provisional Back     alignment and domain information
>COG0730 Predicted permeases [General function prediction only] Back     alignment and domain information
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised Back     alignment and domain information
>PF04018 DUF368: Domain of unknown function (DUF368); InterPro: IPR007163 This is a predicted transmembrane family of unknown function Back     alignment and domain information
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00