Citrus Sinensis ID: 011894

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-----
Protein Sequence
MAPNFQVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPKAEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENGHISAKRQRIECS
Secondary Structure (PSIPRED)
ccccEEEEccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHccccccccccccHHHHHHHHHHcccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccEEcccccccccccccccccccccccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccEEEccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccHHcccccccccccccccccHHHHcccHcccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccEEEEEccccccccccHccHHHHHccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccHHHHHHHcHHHHHHHHHHHHcccccEEEEccccccccccccccccEEccccccccccccccccEEEcccccccccccccEEEcc
Coil and Loop (DISEMBL)
mapnfqvhstesvgSVTDFLASKYFKYIDVRYFTYISMEKLARSLegkgisddktgsadenseshsrASIELSLRKSYYILskipsmednneksehemwsgsgssseegnlkeaskksktkvkmpkaeksnNNALSAAIISKKMKSKFTKAWITFLrlplpvdiYKEVLVTLHRAvipflsnpimlcdfltrsydiggVVSVMALSSLFILMTqhgleypnFYEKLYALLVPSIFMAKHRAKFFELLDsclrspllPAYLAAAFVKKLSRlsilvppsgALVIMALIHNLLrrhpsincllhredgnethnddskAEKEIVDAATVanissikpgidhfddeesnpvksnamrSSLWEIdtlrhhycppvsrFVLSLENDltvraktteinvkdfcsgsyatIFGEEIRRRVKQVPlafykttptslfsdsdfagwtficdkteensngnkeknFACLseenghisaKRQRIECS
Flexible Loop (DISEMBL)
mapnfqvhstesvgsvTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDktgsadenseshsrasielslrKSYYILSKIPSMEDNNEKSEHEMwsgsgssseegnlkeaskksktkvkmpkaeksnnnaLSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAnissikpgidhfddeesnpVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAktteinvkdfcsgsyATIFGEEIRRRVKQVPLAFYKttptslfsdsdfAGWTFICDKteensngnkEKNFaclseenghisakrqriecs
Low Complexity Region (SEG)
MAPNFQVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKsehemwsgsgssseegNLkeaskksktkvkmpkAEKSNNNALsaaiiskkmkskFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENGHISAKRQRIECS
Disordered region (IsUnstruct)
************VGSVTDFLASKYFKYIDVRYFTYISMEKL***********************************SYYIL*********************************************************IISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLH*****************************************************LWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICD**********************************
Disordered Region (DISOPRED)
********STESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLE****************ESHSRASIELSLRKSYYILSKI**********************************************************KMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGN*****************************DHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLEND*********INVKDFCSGSYATIFGEEIRRRVKQV*****************FAGWTFI************************************
Disordered Region (DISEMBL)
*************GSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGK********************SIELSLRKSYYILSKIPSM*******************************************NNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG*********AEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENG************
Disordered Region (DISPRO)
**PNFQVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLE********************RASIELSLRKSYYILSKIPSME********************************************NALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHRED***************************KPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICD**********************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPNFQVHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPKAEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENGHISAKRQRIECS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	475	2.2.26 [Sep-21-2011]
Q8BHY2	516	Nucleolar complex protein	yes	no	0.524	0.482	0.401	2e-55
Q5I0I8	516	Nucleolar complex protein	yes	no	0.564	0.519	0.383	3e-55
Q5ZJC7	508	Nucleolar complex protein	yes	no	0.52	0.486	0.396	3e-55
Q6NU91	525	Nucleolar complex protein	N/A	no	0.524	0.474	0.392	6e-53
Q4VBT2	525	Nucleolar complex protein	yes	no	0.562	0.508	0.375	2e-52
Q6NRQ2	526	Nucleolar complex protein	N/A	no	0.433	0.391	0.441	8e-51
Q9BVI4	516	Nucleolar complex protein	yes	no	0.524	0.482	0.394	3e-48
O94372	485	Uncharacterized protein C	yes	no	0.530	0.519	0.380	3e-47
Q06512	552	Nucleolar complex protein	yes	no	0.602	0.518	0.355	3e-47
P41843	504	Uncharacterized protein T	yes	no	0.429	0.404	0.283	1e-24

>sp|Q8BHY2|NOC4L_MOUSE Nucleolar complex protein 4 homolog OS=Mus musculus GN=Noc4l PE=2 SV=1

 Score =  216 bits (551), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 112/279 (40%), Positives = 170/279 (60%), Gaps = 30/279 (10%)

Query: 142 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 201
           K+ K  F + W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S
Sbjct: 246 KEHKKAFQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAIS 305

Query: 202 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 261
           ++AL+ LFIL+ +H LEYP+FY+KLY LL PSIF  K+RA+FF L D  L S  LPAYL 
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYQKLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLV 365

Query: 262 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 321
           AAF K+L+RL++  PP   L+++ LI NLLRRHP+   ++HR  G E            +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPE------------L 413

Query: 322 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 381
           DA             D +D  E +P +S A+ S LWE+ TL+ HY P VS+    +   L
Sbjct: 414 DA-------------DPYDPTEKDPARSRALESCLWELQTLQQHYHPEVSKAASVINQVL 460

Query: 382 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAF 419
           +V     E+++      +   IF +++++++ + VPL F
Sbjct: 461 SV----PEVSIAPLLELTAYEIFEQDLKKKMPESVPLEF 495

Mus musculus (taxid: 10090)

>sp|Q5I0I8|NOC4L_RAT Nucleolar complex protein 4 homolog OS=Rattus norvegicus GN=Noc4l PE=2 SV=1

 Score =  216 bits (550), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/300 (38%), Positives = 173/300 (57%), Gaps = 32/300 (10%)

Query: 142 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 201
           K+ +  F + W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S
Sbjct: 246 KEQRKAFQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAIS 305

Query: 202 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 261
           ++AL+ LFIL+ +H LEYP+FY++LY LL PSIF  K+RA+FF L D  L S  LPAYL 
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYQRLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLV 365

Query: 262 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 321
           AAF K+L+RL++  PP   L+++ LI NLLRRHP+   ++HR  G E            +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPE------------L 413

Query: 322 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 381
           DA             D +D  E +P +S A+ S LWE+ TL+ HY P VSR    +   L
Sbjct: 414 DA-------------DPYDPTEKDPARSRALESCLWELQTLQQHYHPEVSRAASVINQAL 460

Query: 382 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAFYKTTPTSLFSDSDFAGWTFIC 440
           +V     E+++      +   IF +++++ + + VPL F       L    D     F C
Sbjct: 461 SV----PEVSIAPLLELTAYEIFEQDLKKMMPESVPLEFIPA--KGLLGRQDDLCTQFFC 514

Rattus norvegicus (taxid: 10116)

>sp|Q5ZJC7|NOC4L_CHICK Nucleolar complex protein 4 homolog OS=Gallus gallus GN=NOC4L PE=2 SV=1

 Score =  216 bits (550), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/275 (39%), Positives = 166/275 (60%), Gaps = 28/275 (10%)

Query: 145 KSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMA 204
           K  F + W+TFL+  LP  +YK+VLV LH +++P+++ P ++ DFLT +Y +GG +S++A
Sbjct: 241 KQAFERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAISLLA 300

Query: 205 LSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAF 264
           L+ LFIL+ QH LEYP+FY+KLY+LL PSI+  K+RA+FF L D  L S  LPAYL AAF
Sbjct: 301 LNGLFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLVAAF 360

Query: 265 VKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAA 324
           +K+LSRL++  PP   L+++  I NL RRHP+   L+HR +G +  ++D           
Sbjct: 361 IKRLSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSEDP---------- 410

Query: 325 TVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVR 384
                         +  E+  P +S A+ SSLWE+ +L++HY P V++    L   L+  
Sbjct: 411 --------------YIMEQEEPSESRALESSLWELQSLQNHYHPDVAQAAAILNQSLS-- 454

Query: 385 AKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF 419
               E ++      S + +F +EI++    VPL F
Sbjct: 455 --EIEDDISGLLELSASELFDKEIKKTSANVPLEF 487

Gallus gallus (taxid: 9031)

>sp|Q6NU91|NOC4B_XENLA Nucleolar complex protein 4 homolog B OS=Xenopus laevis GN=noc4l-b PE=2 SV=1

 Score =  209 bits (531), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 109/278 (39%), Positives = 162/278 (58%), Gaps = 29/278 (10%)

Query: 142 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 201
           K+ K  F + W++FL+  L V +YK+VL+ LH +++P +S P ++ DFLT +YD+GG +S
Sbjct: 257 KEQKRVFERVWMSFLKHQLSVSLYKKVLLILHESILPHMSKPSLMIDFLTAAYDVGGAIS 316

Query: 202 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 261
           ++AL+ LFIL+ QH LEYP+FY+KLY+LL PS+F  K+RA+FF L +  L S  LP YL 
Sbjct: 317 LLALNGLFILIHQHNLEYPDFYKKLYSLLEPSVFHVKYRARFFHLANLFLSSTHLPVYLV 376

Query: 262 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 321
           AAF K+L+RL++  PP   L+I+  I NL+RRHP+   L+HR    +   D         
Sbjct: 377 AAFAKRLARLALTAPPQVLLMIIPFICNLIRRHPACRVLIHRPSAGDLVTD--------- 427

Query: 322 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 381
                       P I     EE +P KS A+ S LWE++ L+ HY   V R      N +
Sbjct: 428 ------------PYI----MEEQDPAKSQALESCLWELEVLQQHYHGDVVRAA----NVI 467

Query: 382 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF 419
           +      E +V      S   +F +E++++ K VPL +
Sbjct: 468 SRALSAQESDVSGLLEMSSCELFDKEMKKKFKSVPLEY 505

Xenopus laevis (taxid: 8355)

>sp|Q4VBT2|NOC4L_DANRE Nucleolar complex protein 4 homolog OS=Danio rerio GN=noc4l PE=2 SV=1

 Score =  207 bits (526), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/296 (37%), Positives = 173/296 (58%), Gaps = 29/296 (9%)

Query: 128 EKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLC 187
           ++S ++   AA + K+ K  F + W+ FLR  LP  +YK++LV LH +++P +S+P ++ 
Sbjct: 242 QQSKHDDWKAAKL-KEHKRAFEQMWLLFLRYKLPGSMYKKILVILHESILPQMSDPKLMM 300

Query: 188 DFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELL 247
           DFL+ +YDIGG +S+ AL+ LF+ + +H L+YP+FY+KLY LL PSIF  K+RA+FF L 
Sbjct: 301 DFLSAAYDIGGAISLSALNGLFVPIHEHNLDYPDFYKKLYNLLDPSIFHVKYRARFFHLA 360

Query: 248 DSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGN 307
           +  L S  LP YL AAFVK+L+RLS+  PP+  L+++  I NL+RRHPS   L+HR    
Sbjct: 361 NIFLSSTHLPVYLVAAFVKRLARLSLTAPPTALLILLPFICNLIRRHPSCRVLIHRPSAA 420

Query: 308 ETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYC 367
           +                        +P  D +  EE +P + +A+ SSLWEI TL++H+ 
Sbjct: 421 D------------------------EPCDDPYVMEEEDPAQCHALESSLWEIKTLQNHHH 456

Query: 368 PPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTT 423
           P VS+    +   L+ +    E ++ +    +   +   E++   K VPL F   T
Sbjct: 457 PDVSKAATMINEPLSAQ----EEDISELLELTTFELMERELKGEKKTVPLEFDMAT 508

Danio rerio (taxid: 7955)

>sp|Q6NRQ2|NOC41_XENLA Nucleolar complex protein 4 homolog A OS=Xenopus laevis GN=noc4l-a PE=2 SV=1

 Score =  201 bits (512), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 102/231 (44%), Positives = 142/231 (61%), Gaps = 25/231 (10%)

Query: 142 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 201
           K  K  F + W+ FL+  L V +YK+VL+ LH +++P +S P ++ DFLT +YD+GG +S
Sbjct: 257 KDHKRVFERVWMIFLKHQLSVSLYKKVLLILHESILPHMSKPTLMIDFLTAAYDVGGAIS 316

Query: 202 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 261
           ++AL+ LFIL+ QH LEYP+FY+KLY+LL PSIF  K+RA+FF L +  L S  LP YL 
Sbjct: 317 LLALNGLFILIHQHNLEYPDFYKKLYSLLEPSIFHVKYRARFFHLANMFLSSTHLPVYLV 376

Query: 262 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 321
           AAF K+L+RL++  PP   L+I+  I NL+RRHP+   L+HR                  
Sbjct: 377 AAFAKRLARLALTAPPQVLLMIIPFICNLIRRHPACRVLIHRPSAG-------------- 422

Query: 322 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSR 372
           D AT           D +  EE +P KS A+ SSLWE++ L+ HY   V R
Sbjct: 423 DLAT-----------DPYIMEEQDPAKSQALESSLWELEVLQQHYHGDVVR 462

Xenopus laevis (taxid: 8355)

>sp|Q9BVI4|NOC4L_HUMAN Nucleolar complex protein 4 homolog OS=Homo sapiens GN=NOC4L PE=1 SV=1

 Score =  192 bits (489), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/279 (39%), Positives = 167/279 (59%), Gaps = 30/279 (10%)

Query: 142 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 201
           K+ +  F   W++FL+  LP+ +YK+VL+ +H A++P L+ P ++ DFLTR+ D+GG +S
Sbjct: 246 KEHRRVFQAMWLSFLKHKLPLSLYKKVLLIVHDAILPQLAQPTLMIDFLTRACDLGGALS 305

Query: 202 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 261
           ++AL+ LFIL+ +H LEYP+FY KLY LL PS+F  K+RA+FF L D  L S  LPAYL 
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYRKLYGLLDPSVFHVKYRARFFHLADLFLSSSHLPAYLV 365

Query: 262 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 321
           AAF K+L+RL++  PP   L+++  I NLLRRHP+   L+HR  G E            +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPFICNLLRRHPACRVLVHRPHGPE------------L 413

Query: 322 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 381
           DA             D +D  E +P +S A+ SSLWE+  L+ HY P VS+    +   L
Sbjct: 414 DA-------------DPYDPGEEDPAQSRALESSLWELQALQRHYHPEVSKAASVINQAL 460

Query: 382 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAF 419
           ++     E+++      +   IF  +++++  + VPL F
Sbjct: 461 SM----PEVSIAPLLELTAYEIFERDLKKKGPEPVPLEF 495

Homo sapiens (taxid: 9606)

>sp|O94372|YG06_SCHPO Uncharacterized protein C1604.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1604.06c PE=3 SV=1

 Score =  189 bits (481), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/284 (38%), Positives = 165/284 (58%), Gaps = 32/284 (11%)

Query: 144 MKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVM 203
           +K  F ++W++ L LPL V++YK+VL  +H+ VIPFL  P +L DFLT +Y+    VS++
Sbjct: 226 IKRAFQESWLSALSLPLSVNLYKQVLNVIHKRVIPFLQKPNLLMDFLTDAYNSHHAVSLL 285

Query: 204 ALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAA 263
           AL+ LF LM  H L+YP FY KLYALL  ++   K R++FF LLD  L S  LPA L A+
Sbjct: 286 ALNGLFTLMISHNLDYPLFYPKLYALLDRNLLYLKTRSRFFRLLDLFLSSTHLPATLIAS 345

Query: 264 FVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDA 323
           F+K+L+RL++  PP    +++  I+N L+RHP+   +LHR                    
Sbjct: 346 FIKRLARLALTAPPGAIAIVIPFIYNCLQRHPTCMQMLHR-------------------- 385

Query: 324 ATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTV 383
                 SS + G D FD ++ +P+ + A+ SSLWE+ TL++HY   ++    SL + ++ 
Sbjct: 386 ------SSAESG-DSFDFDQPDPLLTGAIESSLWELSTLQNHYYSNIA----SLASIMSQ 434

Query: 384 RAKTTEINVKDFCSGSYATIFGEEIRRRVK-QVPLAFYKTTPTS 426
           +       ++DF    YAT+   E+RR +K + P+ F K T  S
Sbjct: 435 KFTKPRYELEDFLDHGYATMCDAELRRPLKNEPPIEFEKRTLAS 478

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q06512|NOC4_YEAST Nucleolar complex protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOC4 PE=1 SV=1

 Score =  189 bits (481), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 175/315 (55%), Gaps = 29/315 (9%)

Query: 143 KMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDI------ 196
           K KS F K W++ L   L +  YK +L+ LH+ +IP    P  L DFLT SY++      
Sbjct: 252 KFKSNFEKNWLSLLNGQLSLQQYKSILLILHKRIIPHFHTPTKLMDFLTDSYNLQSSNKN 311

Query: 197 GGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLL 256
            GVV ++AL+ LF LM +  LEYPNFY KLY ++ P +   K+RA+FF L+D  L S  L
Sbjct: 312 AGVVPILALNGLFELMKRFNLEYPNFYMKLYQIINPDLMHVKYRARFFRLMDVFLSSTHL 371

Query: 257 PAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKA 316
            A+L A+F+KKL+RL++  PPS  + ++  I+NL+R+HP  NC++   +     N     
Sbjct: 372 SAHLVASFIKKLARLTLESPPSAIVTVIPFIYNLIRKHP--NCMIMLHNPAFISNPFQTP 429

Query: 317 EKEIVDAATVANISSIKPG-IDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVL 375
           ++       VAN+ ++K   +D FD  ES+P  ++A+ SSLWE+ +L  HY P V+    
Sbjct: 430 DQ-------VANLKTLKENYVDPFDVHESDPELTHALDSSLWELASLMEHYHPNVA---- 478

Query: 376 SLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAG 435
           +L        K    N++DF   +Y ++   E  R++K +P   ++   T++F + D   
Sbjct: 479 TLAKIFAQPFKKLSYNMEDFLDWNYDSLLNAESSRKLKTLPTLEFEAF-TNVFDNED--- 534

Query: 436 WTFICDKTEENSNGN 450
                  +E +S GN
Sbjct: 535 -----GDSEASSQGN 544

Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. Has a role in the nuclear export of 40S pre-ribosomal subunit to the cytoplasm.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P41843|YO93_CAEEL Uncharacterized protein T20B12.3 OS=Caenorhabditis elegans GN=T20B12.3 PE=3 SV=1

 Score =  115 bits (287), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 114/229 (49%), Gaps = 25/229 (10%)

Query: 144 MKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVM 203
           + + +   W+  +   +   +  +++  + + VI  L  P    DF  + +D      ++
Sbjct: 190 ISTDYDNVWMAVMNGKISDKLTLKLIPYITQNVISKLKAPFKSADFFFKMFDKTDYHGIL 249

Query: 204 ALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAA 263
           +L ++F L+++H  EYP FY+K+Y+L  PS+     +     LLDS L S  LP Y+ A+
Sbjct: 250 SLGAIFRLISEHNFEYPKFYDKVYSLTNPSLLYMSQKESILTLLDSFLSSTHLPTYITAS 309

Query: 264 FVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDA 323
           F+K+LSR  +L P      I+ LI NL+ RHP+ + L+HRE     ++D           
Sbjct: 310 FLKRLSRCLLLAPIDAQEPILGLIRNLVIRHPNCSELVHREVPQTLYDDP---------- 359

Query: 324 ATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSR 372
                          FD++E++  K+ A+ SSLWE+  L+ H+   V +
Sbjct: 360 ---------------FDNDETDLHKTRALESSLWEMKLLQCHWNQSVRK 393

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	475
224104817	575	predicted protein [Populus trichocarpa]	0.888	0.733	0.707	1e-177
255580614	652	nucleolar complex protein, putative [Ric	0.947	0.690	0.644	1e-172
357492085	607	Nucleolar complex protein-like protein [	0.943	0.738	0.644	1e-171
356553291	600	PREDICTED: nucleolar complex protein 4 h	0.928	0.735	0.652	1e-169
356501033	581	PREDICTED: nucleolar complex protein 4 h	0.905	0.740	0.654	1e-162
22325731	577	CCAAT-binding factor [Arabidopsis thalia	0.892	0.734	0.636	1e-158
297832324	582	hypothetical protein ARALYDRAFT_480608 [	0.892	0.728	0.632	1e-157
18086412	577	At2g17250/T23A1.11 [Arabidopsis thaliana	0.892	0.734	0.634	1e-157
449500195	608	PREDICTED: nucleolar complex protein 4 h	0.924	0.722	0.584	1e-156
449474135	419	PREDICTED: nucleolar complex protein 4 h	0.873	0.990	0.591	1e-149

>gi|224104817|ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|222849985|gb|EEE87532.1| predicted protein [Populus trichocarpa]

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 307/434 (70%), Positives = 364/434 (83%), Gaps = 12/434 (2%)

Query: 7   VHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHS 66
           V STES+  V + LASKYFKYID+RYFTYI++EK A++LE K ISD KT S D+  ES S
Sbjct: 147 VQSTESLDFVLELLASKYFKYIDIRYFTYINIEKFAKNLELKDISDGKTESGDKVGESDS 206

Query: 67  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 126
           R S+ELS+ K +YI+S IP +ED  + S++E+W GSG           S+  KT+ K  K
Sbjct: 207 RESLELSIYKIHYIISNIPPLEDPKQNSDYELWGGSG----------PSQHLKTEDKDLK 256

Query: 127 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 186
           +EK +N+ LSA   +KKMK KFTKAWI+FLRLPLP+D+YKEVL  LH+AVIP LSNPIML
Sbjct: 257 SEKHDNDVLSAGNYAKKMKLKFTKAWISFLRLPLPIDVYKEVLSNLHQAVIPHLSNPIML 316

Query: 187 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 246
           CDFLTRSYDIGGVVSVMALSSLFILMT+HGLEYPNFYEKLY LL+PSIFMAKHRAKFF+L
Sbjct: 317 CDFLTRSYDIGGVVSVMALSSLFILMTKHGLEYPNFYEKLYVLLLPSIFMAKHRAKFFQL 376

Query: 247 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 306
           LDSCL+SPLLPAYLAAAF KKLSRL+++VPPSGALVI+ALIHNLLRRHPSINCL+H+ED 
Sbjct: 377 LDSCLKSPLLPAYLAAAFAKKLSRLALVVPPSGALVIIALIHNLLRRHPSINCLVHQEDC 436

Query: 307 NETHNDDSKAE--KEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRH 364
           N+T +++S+AE      +     NI++ K GIDHFD+EESNP+KS+A+ SSLWEID+LRH
Sbjct: 437 NDTTDNNSEAEGGDNENEFGASTNIAARKAGIDHFDNEESNPLKSHALGSSLWEIDSLRH 496

Query: 365 HYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTP 424
           HYCPPVSRFV SLENDLTVRAKTTE+NV+DF SGSYATIFGEEIRRRVKQVP+AFYK  P
Sbjct: 497 HYCPPVSRFVQSLENDLTVRAKTTEVNVEDFSSGSYATIFGEEIRRRVKQVPVAFYKAIP 556

Query: 425 TSLFSDSDFAGWTF 438
           TSLFS++DF+GW+F
Sbjct: 557 TSLFSETDFSGWSF 570

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580614|ref|XP_002531130.1| nucleolar complex protein, putative [Ricinus communis] gi|223529279|gb|EEF31250.1| nucleolar complex protein, putative [Ricinus communis]

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 308/478 (64%), Positives = 371/478 (77%), Gaps = 28/478 (5%)

Query: 7   VHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSA-DENSESH 65
           V S   V  V + LASKYF YID+ YFTYIS++KLA+++      D+K  SA + +  SH
Sbjct: 194 VQSATPVDFVLELLASKYFNYIDICYFTYISLDKLAKTMGENDSPDNKAKSAANGDDASH 253

Query: 66  SRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMP 125
            RAS++LS+ K +YILS IP++ED  E S+++MWSG    +   ++         +V   
Sbjct: 254 PRASMDLSIHKIHYILSCIPTVEDPKENSDNKMWSGLVVFNLYSSVLTLLCMQSIQV--- 310

Query: 126 KAEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIM 185
                    LSAA ISKKMK KFTKAWI+FLRLPLPV++YKEVL++LH+AVIP++SNP+M
Sbjct: 311 ---------LSAASISKKMKLKFTKAWISFLRLPLPVNVYKEVLISLHQAVIPYISNPLM 361

Query: 186 LCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFE 245
           LCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALL+PS+FMAKHR+KFF+
Sbjct: 362 LCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLLPSVFMAKHRSKFFQ 421

Query: 246 LLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHRED 305
           LLDSCL+SPLLPAYLAAAF K+LSRL++  PPSG +VI+ALIHNLLRRHPSINCL+HRED
Sbjct: 422 LLDSCLKSPLLPAYLAAAFAKRLSRLALTAPPSGGVVIIALIHNLLRRHPSINCLVHRED 481

Query: 306 GNETHNDDSKAEKEIVDAATVAN------ISSIKPGIDHFDDEESNPVKSNAMRSSLWEI 359
           GNE+  D+SKA+ E  DA    N       S+ KPGID F++EE +P+KS+A+RSSLWEI
Sbjct: 482 GNESAADNSKAKGE--DAGDANNSRNGSHASARKPGIDRFNNEECSPIKSSALRSSLWEI 539

Query: 360 DTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF 419
           DTL HHYCPPVSRFVLSLENDLTVR KTTE+N+ DF S SYATIF EE+RRRVKQVPLAF
Sbjct: 540 DTLSHHYCPPVSRFVLSLENDLTVRKKTTEVNINDFSSSSYATIFEEELRRRVKQVPLAF 599

Query: 420 YKTTPTSLFSDSDFAGWTFICDKTEENS--NGNKEKNFACLSEENGHISAKRQRIECS 475
           +K TPTSLFS+SDFAGWTF  ++++ N   NG  +K     SEEN     KRQRIECS
Sbjct: 600 FKATPTSLFSESDFAGWTFKYEQSKRNDAVNGTSDK-----SEENDCSPTKRQRIECS 652

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357492085|ref|XP_003616331.1| Nucleolar complex protein-like protein [Medicago truncatula] gi|355517666|gb|AES99289.1| Nucleolar complex protein-like protein [Medicago truncatula]

 Score =  606 bits (1562), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 303/470 (64%), Positives = 355/470 (75%), Gaps = 22/470 (4%)

Query: 7   VHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHS 66
           +HST +   + D L SKYFKYIDVRYFT+IS+EKL R+L+GK  SDDKT SAD   ES  
Sbjct: 157 IHSTSNAEFLIDLLISKYFKYIDVRYFTFISLEKLTRNLDGKDASDDKTASADGTDESQL 216

Query: 67  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 126
            +S E  +   YY +S IP +E +++ S  EMWS                   T  K  K
Sbjct: 217 SSSTEFIIHNMYYTISHIPPLEKSDDTSHLEMWS------------------LTDDKQLK 258

Query: 127 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 186
           ++K NNN LSAA I+KKMK KFTKAWI +LRLPLP+D++KEVLV LH+AVIP LSNPIML
Sbjct: 259 SKKRNNNVLSAARIAKKMKLKFTKAWIAYLRLPLPLDLFKEVLVNLHQAVIPHLSNPIML 318

Query: 187 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 246
           CDFLTRSYD+GGVVSVMAL+SLFILMTQHGLEYP FYEKLYALLVPSIFMAKHRA+FF+L
Sbjct: 319 CDFLTRSYDVGGVVSVMALNSLFILMTQHGLEYPKFYEKLYALLVPSIFMAKHRARFFQL 378

Query: 247 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 306
           LDSCL+SPLLPAYLAA+F KKLSRL + VPPSGALVI +L+HN+LRRHPSINCL+HRE+ 
Sbjct: 379 LDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITSLVHNILRRHPSINCLVHREEV 438

Query: 307 NET--HNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRH 364
           NE   H  D +    + +A  VA     K G+DHF+ EES+P+KS AMRSSLWEIDT  H
Sbjct: 439 NEDSEHRTDEETNSNLDNAHNVAKPCQ-KSGLDHFNIEESDPMKSGAMRSSLWEIDTALH 497

Query: 365 HYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTP 424
           HYCPPVSRF LSL  DLTVRAKT+E+N+ DF +GSYATI G EI RRVKQVPLAFYKTTP
Sbjct: 498 HYCPPVSRFALSLGTDLTVRAKTSEVNIGDFSAGSYATILGAEITRRVKQVPLAFYKTTP 557

Query: 425 TSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENGHISAKRQRIEC 474
           +SLFS++DFAGWTF C++  E    N E     L ++  H  AKRQRIEC
Sbjct: 558 SSLFSENDFAGWTFKCEENSETIIDNNENGAKDLLDQE-HSPAKRQRIEC 606

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553291|ref|XP_003544990.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 293/449 (65%), Positives = 349/449 (77%), Gaps = 8/449 (1%)

Query: 7   VHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHS 66
           V+ST     + D LASKYFKYIDVRYFT+IS++KLA +LEGK +SDDK  +AD +SES  
Sbjct: 151 VYSTSPPTFLVDLLASKYFKYIDVRYFTFISLKKLASTLEGKDVSDDKIANADGSSESQM 210

Query: 67  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 126
            +++E  +   YY +S +P  + ++  SE EMWS S     E + K+         K  K
Sbjct: 211 SSNMECVIHNMYYTISHVPPHQGSDNTSELEMWSSS-----ESDHKQLYGDKGADDKPQK 265

Query: 127 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 186
            +K N N LSAA I+KKMK KFTKAWI +LRLPLP+D+YKEVLV LH+AVIP LSNPIML
Sbjct: 266 FQKPNKNVLSAAKIAKKMKLKFTKAWIAYLRLPLPIDVYKEVLVNLHQAVIPHLSNPIML 325

Query: 187 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 246
           CDFLTRSYD+GGVVSVMALSSLF+LMTQ+GLEYPNFYEKLYALLVPSIFMAKHRA+FF+L
Sbjct: 326 CDFLTRSYDVGGVVSVMALSSLFVLMTQYGLEYPNFYEKLYALLVPSIFMAKHRARFFQL 385

Query: 247 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 306
           LDSCL+SPLLPAYLAA+F KKLSRL + VPPSGALVI ALIHN+LRRHPSINCL+HREDG
Sbjct: 386 LDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITALIHNILRRHPSINCLVHREDG 445

Query: 307 NETHNDDSKAEKEIV---DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLR 363
            +    D + ++ +    D A    + S K GIDHF+  E++P KS AMRSSLWEIDT+ 
Sbjct: 446 VDEGKGDHRTDEGMATNSDNAKTVAMPSQKSGIDHFNSSETDPKKSGAMRSSLWEIDTIL 505

Query: 364 HHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTT 423
           HHYCPP SRF LSL NDLTVRAKTTE+NV DF +GSYATI G EI RRVKQVPLAF+K T
Sbjct: 506 HHYCPPASRFALSLGNDLTVRAKTTEVNVGDFSAGSYATILGAEISRRVKQVPLAFFKAT 565

Query: 424 PTSLFSDSDFAGWTFICDKTEENSNGNKE 452
           P+SLFS++DFAGWTF C++T +  N N +
Sbjct: 566 PSSLFSETDFAGWTFKCEETPKMINDNND 594

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501033|ref|XP_003519333.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 290/443 (65%), Positives = 345/443 (77%), Gaps = 13/443 (2%)

Query: 7   VHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHS 66
           V+S+     + D LA+KYFKYIDVRYFT+IS++KLA +LEGK +S    G+AD  SES  
Sbjct: 146 VYSSSPPTFLVDLLATKYFKYIDVRYFTFISLKKLASTLEGKDVS----GAADGTSESQL 201

Query: 67  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 126
            +++E  +   YY +S +P  + ++  S+ EMWS     S E + K+ S       K  K
Sbjct: 202 SSNMECVIHNMYYTISHVPPHKGSDNTSDLEMWS-----SSESDHKQLSGDKGADDKPQK 256

Query: 127 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 186
           ++K N N LSAA I+KKMK KFTKAWI +LRLPLP D+YKEVLV LH+AVIP LSNPI+L
Sbjct: 257 SQKPNKNVLSAAKIAKKMKLKFTKAWIAYLRLPLPHDVYKEVLVCLHQAVIPHLSNPIIL 316

Query: 187 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 246
           CDFLTRSYD+GGVVSVMALSSLF+LMTQ+GLEYPNFY+KLYALLVPSIFMAKHRA+FF+L
Sbjct: 317 CDFLTRSYDVGGVVSVMALSSLFVLMTQYGLEYPNFYDKLYALLVPSIFMAKHRARFFQL 376

Query: 247 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 306
           LDSCL+SPLLPAYLAA+F KKLSRL + VPPSGALVI ALIHNLLRRHPSINCL+HREDG
Sbjct: 377 LDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITALIHNLLRRHPSINCLVHREDG 436

Query: 307 -NETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHH 365
            +E   D+  A     D A  A + S K GIDHF+  E++P KS AMRSSLWEIDT+ HH
Sbjct: 437 VDEGKGDEGMATNS--DNAKTA-MPSQKSGIDHFNSSETDPKKSGAMRSSLWEIDTILHH 493

Query: 366 YCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPT 425
           YCPP SRF LSL NDLTVRAKTTE+NV DF +GSYATI G EI RRVKQVPLAF+K TP+
Sbjct: 494 YCPPASRFALSLGNDLTVRAKTTEVNVGDFSAGSYATILGAEISRRVKQVPLAFFKATPS 553

Query: 426 SLFSDSDFAGWTFICDKTEENSN 448
           SLFS++DFAGWTF C++T +  N
Sbjct: 554 SLFSETDFAGWTFKCEETPKMIN 576

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22325731|ref|NP_179316.2| CCAAT-binding factor [Arabidopsis thaliana] gi|330251509|gb|AEC06603.1| CCAAT-binding factor [Arabidopsis thaliana]

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 279/438 (63%), Positives = 338/438 (77%), Gaps = 14/438 (3%)

Query: 7   VHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHS 66
           +HS   +    D L SKYFKYIDVRYFTYISMEK  ++LE   +S D+T   +  +ES S
Sbjct: 151 IHSEVDIEIFLDILTSKYFKYIDVRYFTYISMEKFVKTLEA-SVSADRTVIENNEAESDS 209

Query: 67  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 126
           + S+ELS+RK Y +LS+IP  E   EKS+HEMWSGS  S  E   K   KK KT      
Sbjct: 210 KESLELSVRKIYQVLSQIPPPEKQAEKSQHEMWSGSDESISE---KPTDKKKKT------ 260

Query: 127 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 186
            EK ++  LS A ISK+MK KFTKAWI+FLRLPLP+D+YKEVL ++H  VIP LSNP ML
Sbjct: 261 -EKGDSTLLSPATISKRMKLKFTKAWISFLRLPLPIDVYKEVLASIHLTVIPHLSNPTML 319

Query: 187 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 246
           CDFLT+SYDIGGVVSVMALSSLFILMTQHGLEYP FYEKLYALLVPS+F+AKHRAKF +L
Sbjct: 320 CDFLTKSYDIGGVVSVMALSSLFILMTQHGLEYPFFYEKLYALLVPSVFVAKHRAKFLQL 379

Query: 247 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 306
           LD+CL+S +LPAYLAA+F KKLSRLS+ +PP+G+LVI ALI+NLLRR+P+IN L+     
Sbjct: 380 LDACLKSSMLPAYLAASFTKKLSRLSLSIPPAGSLVITALIYNLLRRNPTINHLVQEIVE 439

Query: 307 NETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHY 366
           N    D++  E    + +    I   K GID+F+++ES+P KS A++SSLWEIDTLRHHY
Sbjct: 440 NA---DEANTEAGEHNESQPKTIKKRKLGIDYFNNQESDPKKSGALKSSLWEIDTLRHHY 496

Query: 367 CPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTS 426
           CPPVSRF+ SLE +LT+R+KTTE+ ++DFCSGSYATIFG+EIRRRVKQVPLAFYKT PTS
Sbjct: 497 CPPVSRFISSLETNLTIRSKTTEMKIEDFCSGSYATIFGDEIRRRVKQVPLAFYKTVPTS 556

Query: 427 LFSDSDFAGWTFICDKTE 444
           LF+DSDF GWTF   + E
Sbjct: 557 LFADSDFPGWTFTIPQEE 574

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297832324|ref|XP_002884044.1| hypothetical protein ARALYDRAFT_480608 [Arabidopsis lyrata subsp. lyrata] gi|297329884|gb|EFH60303.1| hypothetical protein ARALYDRAFT_480608 [Arabidopsis lyrata subsp. lyrata]

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/438 (63%), Positives = 342/438 (78%), Gaps = 14/438 (3%)

Query: 7   VHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHS 66
           +HS   +    D L SKYFKYIDVRYFTYISMEK  ++LE   +S D+T   +  +E+ S
Sbjct: 156 IHSEVDIEIFLDILTSKYFKYIDVRYFTYISMEKFVKTLEA-SVSADRTAIENSEAENDS 214

Query: 67  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 126
           + S+ELS+RK Y +LS+IP  E   EKS HEMWSGS  SS E   K   KK KT      
Sbjct: 215 KESLELSVRKIYQVLSQIPPPEKLAEKSHHEMWSGSDESSSE---KPTDKKKKT------ 265

Query: 127 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 186
            E+ ++  LS   ISK+MK KFTKAWI+FLRLPLP+D+YKEVL ++H  VIP LSNP ML
Sbjct: 266 -EEGDSTLLSPTTISKRMKLKFTKAWISFLRLPLPIDVYKEVLASIHLTVIPHLSNPTML 324

Query: 187 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 246
           CDFLT+SYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPS+F+AKHRAKF +L
Sbjct: 325 CDFLTKSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSVFVAKHRAKFLQL 384

Query: 247 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 306
           LD+CL+S +LPAYLAA+F KKLSRLS+ +PP+G+LVI ALI+NLLRRHP+IN L+ +E  
Sbjct: 385 LDACLKSSMLPAYLAASFTKKLSRLSLSIPPAGSLVITALIYNLLRRHPTINHLV-QETV 443

Query: 307 NETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHY 366
             T+  +++A++   + +    I   K GID+F+++ES+P KS A++SSLWEIDTLRHHY
Sbjct: 444 ENTNEGNTEADEH--NESQPKTIKKRKLGIDYFNNQESDPKKSGALKSSLWEIDTLRHHY 501

Query: 367 CPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTS 426
           CPPVSRF+ SLE +LT+R+KTTE+ ++DF SGSYATIFG+EIRRRVKQVPLAFYKT PTS
Sbjct: 502 CPPVSRFISSLETNLTIRSKTTEMKIEDFSSGSYATIFGDEIRRRVKQVPLAFYKTVPTS 561

Query: 427 LFSDSDFAGWTFICDKTE 444
           LF+DSDF GW+F   + E
Sbjct: 562 LFADSDFPGWSFTIPQEE 579

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18086412|gb|AAL57663.1| At2g17250/T23A1.11 [Arabidopsis thaliana]

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 278/438 (63%), Positives = 338/438 (77%), Gaps = 14/438 (3%)

Query: 7   VHSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHS 66
           +HS   +    D L SKYFKYIDVRYFTYISMEK  ++LE   +S D+T   +  +ES S
Sbjct: 151 IHSEVDIEIFLDILTSKYFKYIDVRYFTYISMEKFVKTLEA-SVSADRTVIENNEAESDS 209

Query: 67  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 126
           + S+ELS+RK Y +LS+IP  E   EKS+HEMWSGS  S  E   K   KK KT      
Sbjct: 210 KESLELSVRKIYQVLSQIPPPEKQAEKSQHEMWSGSDESISE---KPTDKKKKT------ 260

Query: 127 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 186
            EK ++  LS A ISK+MK KFTKAWI+FLRLPLP+D+YKEVL ++H  VIP LSNP ML
Sbjct: 261 -EKGDSTLLSPATISKRMKLKFTKAWISFLRLPLPIDVYKEVLASIHLTVIPHLSNPTML 319

Query: 187 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 246
           CDFLT+SYDIGGVVSVMALSSLFILMT+HGLEYP FYEKLYALLVPS+F+AKHRAKF +L
Sbjct: 320 CDFLTKSYDIGGVVSVMALSSLFILMTRHGLEYPFFYEKLYALLVPSVFVAKHRAKFLQL 379

Query: 247 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 306
           LD+CL+S +LPAYLAA+F KKLSRLS+ +PP+G+LVI ALI+NLLRR+P+IN L+     
Sbjct: 380 LDACLKSSMLPAYLAASFTKKLSRLSLSIPPAGSLVITALIYNLLRRNPTINHLVQEIVE 439

Query: 307 NETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHY 366
           N    D++  E    + +    I   K GID+F+++ES+P KS A++SSLWEIDTLRHHY
Sbjct: 440 NA---DEANTEAGEHNESQPKTIKKRKLGIDYFNNQESDPKKSGALKSSLWEIDTLRHHY 496

Query: 367 CPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTS 426
           CPPVSRF+ SLE +LT+R+KTTE+ ++DFCSGSYATIFG+EIRRRVKQVPLAFYKT PTS
Sbjct: 497 CPPVSRFISSLETNLTIRSKTTEMKIEDFCSGSYATIFGDEIRRRVKQVPLAFYKTVPTS 556

Query: 427 LFSDSDFAGWTFICDKTE 444
           LF+DSDF GWTF   + E
Sbjct: 557 LFADSDFPGWTFTIPQEE 574

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449500195|ref|XP_004161032.1| PREDICTED: nucleolar complex protein 4 homolog B-like [Cucumis sativus]

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 276/472 (58%), Positives = 365/472 (77%), Gaps = 33/472 (6%)

Query: 8   HSTESVGSVTDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHSR 67
           HS+  V ++   L  KYF Y+DVRYFTYIS+++LA++ + + +S D  G        HS+
Sbjct: 166 HSSTPVDTLIALLVKKYFHYLDVRYFTYISIKELAKTFKAEYMSGDVGG--------HSK 217

Query: 68  ASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPKA 127
             +E  +   + I+S IP +E++N+ S++ MW  SG +    + +EA +     +KM K 
Sbjct: 218 EGVEF-IHIVHSIISSIPPLENSNQ-SDYTMWVESGDNKVLSDDQEAKQ-----LKMKKN 270

Query: 128 EKSNN----NALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNP 183
           ++ N       L+++ I ++MK KF+KAWI+FL+LPLP+D+YKEVLV L + VIP+LS P
Sbjct: 271 DEENIANTLQVLTSSKIVRRMKLKFSKAWISFLKLPLPIDVYKEVLVILDQEVIPYLSKP 330

Query: 184 IMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKF 243
           I+L DFLT+SYDIGGV+SVMALSSLF+LMT++GLEYPNFYEKLYALLVPSIFMAKHRAKF
Sbjct: 331 IILSDFLTKSYDIGGVISVMALSSLFLLMTKYGLEYPNFYEKLYALLVPSIFMAKHRAKF 390

Query: 244 FELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHR 303
           F+LLDSCL+SPLLPAYLAAAF KKLSRLS++VPPSGALVI+ALIHNLLRRHPSINCL+HR
Sbjct: 391 FQLLDSCLKSPLLPAYLAAAFAKKLSRLSLVVPPSGALVIIALIHNLLRRHPSINCLVHR 450

Query: 304 EDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLR 363
           E+ +E+ ND+S +E+      T A+   +KPGIDHF+ EE++P+KS+A+RSSLWEID+LR
Sbjct: 451 ENVSESKNDNSTSEE--AAKGTDADTPKMKPGIDHFNYEEADPIKSSALRSSLWEIDSLR 508

Query: 364 HHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTT 423
           HHYCPPVSR VLSLENDLTVR+KTTEI+VKDF +GSY+TI G+E+++++K+VPLAFY+  
Sbjct: 509 HHYCPPVSRLVLSLENDLTVRSKTTEIDVKDFVAGSYSTILGQELKKKLKRVPLAFYQAP 568

Query: 424 PTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENGHISAKRQRIECS 475
           PT+LFS+SDFAGW+F         N + EKN     + + H+SAKRQR+  S
Sbjct: 569 PTTLFSESDFAGWSF--------DNEHSEKNI----DSSDHLSAKRQRVGSS 608

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449474135|ref|XP_004154083.1| PREDICTED: nucleolar complex protein 4 homolog B-like, partial [Cucumis sativus]

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 265/448 (59%), Positives = 350/448 (78%), Gaps = 33/448 (7%)

Query: 32  YFTYISMEKLARSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNN 91
           YFTYIS+++LA++ + + +S D  G        HS+  +E  +   + I+S IP +E++N
Sbjct: 1   YFTYISIKELAKTFKAEYMSGDVGG--------HSKEGVEF-IHIVHSIISSIPPLENSN 51

Query: 92  EKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPKAEKSNN----NALSAAIISKKMKSK 147
           + S++ MW  SG +    + +EA +     +KM K ++ N       L+++ I ++MK K
Sbjct: 52  Q-SDYTMWVESGDNKVLSDDQEAKQ-----LKMKKNDEENIANTLQVLTSSKIVRRMKLK 105

Query: 148 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 207
           F+KAWI+FL+LPLP+D+YKEVLV L + VIP+LS PI+L DFLT+SYDIGGV+SVMALSS
Sbjct: 106 FSKAWISFLKLPLPIDVYKEVLVILDQEVIPYLSKPIILSDFLTKSYDIGGVISVMALSS 165

Query: 208 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 267
           LF+LMT++GLEYPNFYEKLYALLVPSIFMAKHRAKFF+LLDSCL+SPLLPAYLAAAF KK
Sbjct: 166 LFLLMTKYGLEYPNFYEKLYALLVPSIFMAKHRAKFFQLLDSCLKSPLLPAYLAAAFAKK 225

Query: 268 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVA 327
           LSRLS++VPPSGALVI+ALIHNLLRRHPSINCL+HRE+ +E+ ND+S +E+      T A
Sbjct: 226 LSRLSLVVPPSGALVIIALIHNLLRRHPSINCLVHRENVSESKNDNSTSEE--AAKGTDA 283

Query: 328 NISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKT 387
           +   +KPGIDHF+ EE++P+KS+A+RSSLWEID+LRHHYCPPVSR VLSLENDLTVR+KT
Sbjct: 284 DTPKMKPGIDHFNYEEADPIKSSALRSSLWEIDSLRHHYCPPVSRLVLSLENDLTVRSKT 343

Query: 388 TEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENS 447
           TEI+VKDF +GSY+TI G+E+++++K+VPLAFY+  PT+LFS+SDFAGW+F         
Sbjct: 344 TEIDVKDFVAGSYSTILGQELKKKLKRVPLAFYQAPPTTLFSESDFAGWSF--------D 395

Query: 448 NGNKEKNFACLSEENGHISAKRQRIECS 475
           N + EKN     + + H+SAKRQR+  S
Sbjct: 396 NEHSEKNI----DSSDHLSAKRQRVGSS 419

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	475
TAIR|locus:2059657	577	EMB2762 "AT2G17250" [Arabidops	0.661	0.544	0.665	4.2e-132
UNIPROTKB|F1P3D2	519	EP400 "Uncharacterized protein	0.349	0.319	0.5	8.1e-57
UNIPROTKB|Q5ZJC7	508	NOC4L "Nucleolar complex prote	0.349	0.326	0.5	8.1e-57
MGI|MGI:2140843	516	Noc4l "nucleolar complex assoc	0.362	0.333	0.491	1e-56
RGD|1310661	516	Noc4l "nucleolar complex assoc	0.362	0.333	0.485	3.4e-56
UNIPROTKB|F1Q279	516	NOC4L "Uncharacterized protein	0.36	0.331	0.508	9.9e-56
UNIPROTKB|F1RFR4	516	NOC4L "Uncharacterized protein	0.362	0.333	0.505	1.3e-53
ZFIN|ZDB-GENE-050522-98	525	noc4l "nucleolar complex assoc	0.362	0.327	0.476	2.6e-51
CGD|CAL0002495	562	NOC4 [Candida albicans (taxid:	0.362	0.306	0.436	2.5e-47
UNIPROTKB|Q59U49	562	CaO19.1902 "Putative uncharact	0.362	0.306	0.436	2.5e-47

TAIR|locus:2059657 EMB2762 "AT2G17250" [Arabidopsis thaliana (taxid:3702)]

 Score = 1100 (392.3 bits), Expect = 4.2e-132, Sum P(2) = 4.2e-132
 Identities = 211/317 (66%), Positives = 255/317 (80%)

Query:   128 EKSNNNALXXXXXXXXXXXXFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLC 187
             EK ++  L            FTKAWI+FLRLPLP+D+YKEVL ++H  VIP LSNP MLC
Sbjct:   261 EKGDSTLLSPATISKRMKLKFTKAWISFLRLPLPIDVYKEVLASIHLTVIPHLSNPTMLC 320

Query:   188 DFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELL 247
             DFLT+SYDIGGVVSVMALSSLFILMTQHGLEYP FYEKLYALLVPS+F+AKHRAKF +LL
Sbjct:   321 DFLTKSYDIGGVVSVMALSSLFILMTQHGLEYPFFYEKLYALLVPSVFVAKHRAKFLQLL 380

Query:   248 DSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGN 307
             D+CL+S +LPAYLAA+F KKLSRLS+ +PP+G+LVI ALI+NLLRR+P+IN L+     N
Sbjct:   381 DACLKSSMLPAYLAASFTKKLSRLSLSIPPAGSLVITALIYNLLRRNPTINHLVQEIVEN 440

Query:   308 ETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYC 367
                 D++  E    + +    I   K GID+F+++ES+P KS A++SSLWEIDTLRHHYC
Sbjct:   441 A---DEANTEAGEHNESQPKTIKKRKLGIDYFNNQESDPKKSGALKSSLWEIDTLRHHYC 497

Query:   368 PPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSL 427
             PPVSRF+ SLE +LT+R+KTTE+ ++DFCSGSYATIFG+EIRRRVKQVPLAFYKT PTSL
Sbjct:   498 PPVSRFISSLETNLTIRSKTTEMKIEDFCSGSYATIFGDEIRRRVKQVPLAFYKTVPTSL 557

Query:   428 FSDSDFAGWTFICDKTE 444
             F+DSDF GWTF   + E
Sbjct:   558 FADSDFPGWTFTIPQEE 574

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IDA

GO:0000478 "endonucleolytic cleavage involved in rRNA processing" evidence=RCA

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

GO:0005654 "nucleoplasm" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0006364 "rRNA processing" evidence=IMP

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

UNIPROTKB|F1P3D2 EP400 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 462 (167.7 bits), Expect = 8.1e-57, Sum P(3) = 8.1e-57
 Identities = 83/166 (50%), Positives = 122/166 (73%)

Query:   148 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 207
             F + W+TFL+  LP  +YK+VLV LH +++P+++ P ++ DFLT +Y +GG +S++AL+ 
Sbjct:   255 FERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAISLLALNG 314

Query:   208 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 267
             LFIL+ QH LEYP+FY+KLY+LL PSI+  K+RA+FF L D  L S  LPAYL AAF+K+
Sbjct:   315 LFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLVAAFIKR 374

Query:   268 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD 313
             LSRL++  PP   L+++  I NL RRHP+   L+HR +G +  ++D
Sbjct:   375 LSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSED 420

GO:0042254 "ribosome biogenesis" evidence=IEA

UNIPROTKB|Q5ZJC7 NOC4L "Nucleolar complex protein 4 homolog" [Gallus gallus (taxid:9031)]

 Score = 462 (167.7 bits), Expect = 8.1e-57, Sum P(3) = 8.1e-57
 Identities = 83/166 (50%), Positives = 122/166 (73%)

Query:   148 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 207
             F + W+TFL+  LP  +YK+VLV LH +++P+++ P ++ DFLT +Y +GG +S++AL+ 
Sbjct:   244 FERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAISLLALNG 303

Query:   208 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 267
             LFIL+ QH LEYP+FY+KLY+LL PSI+  K+RA+FF L D  L S  LPAYL AAF+K+
Sbjct:   304 LFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLVAAFIKR 363

Query:   268 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD 313
             LSRL++  PP   L+++  I NL RRHP+   L+HR +G +  ++D
Sbjct:   364 LSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSED 409

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

MGI|MGI:2140843 Noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 454 (164.9 bits), Expect = 1.0e-56, Sum P(3) = 1.0e-56
 Identities = 85/173 (49%), Positives = 121/173 (69%)

Query:   148 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 207
             F + W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S++AL+ 
Sbjct:   252 FQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAISLLALNG 311

Query:   208 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 267
             LFIL+ +H LEYP+FY+KLY LL PSIF  K+RA+FF L D  L S  LPAYL AAF K+
Sbjct:   312 LFILIHKHNLEYPDFYQKLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKR 371

Query:   268 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD-SKAEKE 319
             L+RL++  PP   L+++ LI NLLRRHP+   ++HR  G E   D     EK+
Sbjct:   372 LARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPELDADPYDPTEKD 424

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1310661 Noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 451 (163.8 bits), Expect = 3.4e-56, Sum P(3) = 3.4e-56
 Identities = 84/173 (48%), Positives = 121/173 (69%)

Query:   148 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 207
             F + W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S++AL+ 
Sbjct:   252 FQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAISLLALNG 311

Query:   208 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 267
             LFIL+ +H LEYP+FY++LY LL PSIF  K+RA+FF L D  L S  LPAYL AAF K+
Sbjct:   312 LFILIHKHNLEYPDFYQRLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKR 371

Query:   268 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD-SKAEKE 319
             L+RL++  PP   L+++ LI NLLRRHP+   ++HR  G E   D     EK+
Sbjct:   372 LARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPELDADPYDPTEKD 424

GO:0005730 "nucleolus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

UNIPROTKB|F1Q279 NOC4L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 461 (167.3 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
 Identities = 87/171 (50%), Positives = 120/171 (70%)

Query:   148 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 207
             F   W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLTR+YD+GG +S++AL+ 
Sbjct:   252 FQLMWLGFLKHELPLGLYKKVLVIMHDSILPHLAQPSLMIDFLTRAYDMGGAISLLALNG 311

Query:   208 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 267
             LFIL+ QH LEYP+FY KLY LL PSIF  K+RA+FF L D  L S  LPAYL AAF K+
Sbjct:   312 LFILIHQHNLEYPDFYRKLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKR 371

Query:   268 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEK 318
             LSRL++  PP   L+++  I NLLRRHP+   L+H   G+E  +D    E+
Sbjct:   372 LSRLALTAPPEALLMVLPFICNLLRRHPACRVLVHHPLGHELDSDPFDPEE 422

GO:0042254 "ribosome biogenesis" evidence=IEA

UNIPROTKB|F1RFR4 NOC4L "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 456 (165.6 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
 Identities = 87/172 (50%), Positives = 120/172 (69%)

Query:   148 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 207
             F   W+ FL+  LP+ I K+VLV +H +++P L+ P ++ DFLTR+YDIGG +S++AL+ 
Sbjct:   252 FQVMWLGFLKHQLPLRICKKVLVIMHDSILPHLAQPTLMIDFLTRAYDIGGAISLLALNG 311

Query:   208 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 267
             LFIL+ +H LEYP+FY KLY+LL PS+F  K+RA+FF L D  L S  LPAYL AAF K+
Sbjct:   312 LFILIHKHNLEYPDFYRKLYSLLDPSVFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKR 371

Query:   268 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 319
             L+RL++  PP   L+++  I NLLRRHP+   L+HR  G E   D    E+E
Sbjct:   372 LARLALTAPPEALLMVLPFICNLLRRHPACRVLVHRPRGPELDADPYDPEEE 423

GO:0042254 "ribosome biogenesis" evidence=IEA

ZFIN|ZDB-GENE-050522-98 noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 440 (159.9 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
 Identities = 82/172 (47%), Positives = 119/172 (69%)

Query:   148 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 207
             F + W+ FLR  LP  +YK++LV LH +++P +S+P ++ DFL+ +YDIGG +S+ AL+ 
Sbjct:   261 FEQMWLLFLRYKLPGSMYKKILVILHESILPQMSDPKLMMDFLSAAYDIGGAISLSALNG 320

Query:   208 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 267
             LF+ + +H L+YP+FY+KLY LL PSIF  K+RA+FF L +  L S  LP YL AAFVK+
Sbjct:   321 LFVPIHEHNLDYPDFYKKLYNLLDPSIFHVKYRARFFHLANIFLSSTHLPVYLVAAFVKR 380

Query:   268 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 319
             L+RLS+  PP+  L+++  I NL+RRHPS   L+HR    +   DD    +E
Sbjct:   381 LARLSLTAPPTALLILLPFICNLIRRHPSCRVLIHRPSAADEPCDDPYVMEE 432

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

CGD|CAL0002495 NOC4 [Candida albicans (taxid:5476)]

 Score = 383 (139.9 bits), Expect = 2.5e-47, Sum P(2) = 2.5e-47
 Identities = 76/174 (43%), Positives = 112/174 (64%)

Query:   148 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGG--VVSVMAL 205
             F K+ I  L  PL  + YK VL  LH+ +IP++S P  L DFLT  YD+    +V ++AL
Sbjct:   291 FQKSVIAMLSYPLLQEQYKSVLTILHKRIIPYMSQPQSLMDFLTDCYDLTDDLIVPILAL 350

Query:   206 SSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFV 265
             +SL+ LM  + LEYP+FY KLY+LL P +   K+R++FF L D  L S  L A L A+F+
Sbjct:   351 NSLYELMKNYNLEYPDFYSKLYSLLTPELLYTKYRSRFFRLCDLFLSSTHLSANLVASFI 410

Query:   266 KKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 319
             KKL+R+S+    SG ++I+  I+NLL+RHP+   +LH+ED    + D   +E++
Sbjct:   411 KKLARISLAASASGVVIIIPFIYNLLKRHPTCMIMLHKEDTESGYQDPFNSEEK 464

GO:0003674 "molecular_function" evidence=ND

GO:0035690 "cellular response to drug" evidence=IMP

GO:0030692 "Noc4p-Nop14p complex" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

UNIPROTKB|Q59U49 CaO19.1902 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 383 (139.9 bits), Expect = 2.5e-47, Sum P(2) = 2.5e-47
 Identities = 76/174 (43%), Positives = 112/174 (64%)

Query:   148 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGG--VVSVMAL 205
             F K+ I  L  PL  + YK VL  LH+ +IP++S P  L DFLT  YD+    +V ++AL
Sbjct:   291 FQKSVIAMLSYPLLQEQYKSVLTILHKRIIPYMSQPQSLMDFLTDCYDLTDDLIVPILAL 350

Query:   206 SSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFV 265
             +SL+ LM  + LEYP+FY KLY+LL P +   K+R++FF L D  L S  L A L A+F+
Sbjct:   351 NSLYELMKNYNLEYPDFYSKLYSLLTPELLYTKYRSRFFRLCDLFLSSTHLSANLVASFI 410

Query:   266 KKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 319
             KKL+R+S+    SG ++I+  I+NLL+RHP+   +LH+ED    + D   +E++
Sbjct:   411 KKLARISLAASASGVVIIIPFIYNLLKRHPTCMIMLHKEDTESGYQDPFNSEEK 464

GO:0003674 "molecular_function" evidence=ND

GO:0035690 "cellular response to drug" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.IX.175.1	hypothetical protein (575 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.X.2964.1	hypothetical protein (516 aa)				•	•		•		0.653
	estExt_fgenesh4_pm.C_280108	hypothetical protein (960 aa)				•	•		•		0.624
	eugene3.00640202	hypothetical protein (1181 aa)				•	•		•		0.577
	eugene3.00160311	hypothetical protein (691 aa)				•	•		•		0.554
	estExt_Genewise1_v1.C_LG_VII2715	hypothetical protein (380 aa)				•	•		•		0.544
	gw1.86.17.1	hypothetical protein (573 aa)				•					0.509
	estExt_Genewise1_v1.C_LG_IV0024	SubName- Full=Putative uncharacterized protein; (604 aa)				•					0.472
	gw1.I.4832.1	hypothetical protein (422 aa)				•					0.470
	estExt_fgenesh4_pg.C_LG_XV0629	hypothetical protein (314 aa)				•					0.470
	grail3.0101007501	hypothetical protein (229 aa)				•	•		•		0.463

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	475
pfam03914	151	pfam03914, CBF, CBF/Mak21 family	1e-51
COG5117	657	COG5117, NOC3, Protein involved in the nuclear exp	0.002

>gnl|CDD|217788 pfam03914, CBF, CBF/Mak21 family

 Score =  171 bits (435), Expect = 1e-51
 Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 27/176 (15%)

Query: 200 VSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAK-FFELLDSCLRSPLLPA 258
            S++AL  LF LM+ H L+   FY KLY LL+  +  + ++++ F  LLD  L+S  LPA
Sbjct: 1   TSILALFLLFQLMSGHNLDLDRFYRKLYRLLLDKLLHSSYKSRLFLRLLDKALKSDHLPA 60

Query: 259 YLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEK 318
              AAFVK+L +L++  PPS AL I+ LI NLL+RHP++  LLH E+             
Sbjct: 61  QRVAAFVKRLLQLALHAPPSFALGILPLIRNLLKRHPNLKSLLHTEERGG---------- 110

Query: 319 EIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFV 374
                               +D EE +P  SNA+ SSLWE++ L++HY P V++  
Sbjct: 111 ----------------EDGPYDPEERDPEYSNALNSSLWELELLQNHYHPSVAKLA 150

Length = 151

>gnl|CDD|227447 COG5117, NOC3, Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis / Intracellular trafficking and secretion]

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 25/117 (21%), Positives = 36/117 (30%), Gaps = 27/117 (23%)

Query: 261 AAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEI 320
              F K+L       P      I+ +   L  R+   + L   E                
Sbjct: 562 HVIFKKRLLYCCSRSPEEFKGAILDISAKLDIRYSDCSNLKCSEF--------------- 606

Query: 321 VDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 377
                         G  + D   SNP  SN+  + L+E   L+ HY P VS+    L
Sbjct: 607 ------------DIGAGNVDSIPSNPDLSNSSTAVLFEYFLLKQHYSPAVSQSAKEL 651

Length = 657

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	475
KOG2154	505	consensus Predicted nucleolar protein involved in	100.0
KOG2038	988	consensus CAATT-binding transcription factor/60S r	100.0
PF03914	164	CBF: CBF/Mak21 family; InterPro: IPR005612 This do	100.0
COG5593	821	Nucleic-acid-binding protein possibly involved in	99.97
COG5117	657	NOC3 Protein involved in the nuclear export of pre	99.84
KOG2153	704	consensus Protein involved in the nuclear export o	99.7
KOG2153	704	consensus Protein involved in the nuclear export o	97.94

>KOG2154 consensus Predicted nucleolar protein involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=7.4e-71  Score=566.60  Aligned_cols=332  Identities=38%  Similarity=0.606  Sum_probs=289.8

Q ss_pred             HHHHHhhcccccCchhhHHHHHHHHHHhhhcCCCCCCCCCCCCCCccccchhhHHHHHHHHHHHHhcCCCCCCCcccccc
Q 011894           17 TDFLASKYFKYIDVRYFTYISMEKLARSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEH   96 (475)
Q Consensus        17 ~~~~~~~y~~y~Dvryyt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ll~~~~~~~~~~~~~~~   96 (475)
                      +..|.+. ..|+|.||.+|....+.+.++..+.+.+             +    +.+..|.+.+++.++++-..   +..
T Consensus       159 it~f~e~-~~~t~k~f~~~~~~~~~~~s~~~q~~~D-------------p----~v~~~N~~~~ls~v~~p~~~---~S~  217 (505)
T KOG2154|consen  159 ITIFLEN-VGYTDKYFKYFDITLTQVRSVVPQHPTD-------------P----PVIANNELEILSLVSLPLSV---SST  217 (505)
T ss_pred             HHHHHHh-ccchhHHHHHHHHHHHHHHHhccCCCCC-------------C----chhhcchHHHhhhccCCCCc---ccH
Confidence            4444443 6789999999998888888776533211             1    47778999999999986522   122


Q ss_pred             cccccCCCCCccchhhHhhhhhhcccccchhhhhccccchHHHHHHHHHHHHHHHHHHhccCCCChhhHHHHHHHhhhhh
Q 011894           97 EMWSGSGSSSEEGNLKEASKKSKTKVKMPKAEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAV  176 (475)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~k~~~~~awL~~Lk~~lp~~l~k~vL~~L~k~i  176 (475)
                      ..|...+                              .++.+...+++++.|+.+|+++++..+|..+++++|.+++++|
T Consensus       218 ~~~~~~~------------------------------~p~~~~~~~~~~k~f~~~Wls~l~~~ls~~lykkil~vih~rv  267 (505)
T KOG2154|consen  218 SSYVLEP------------------------------IPKQTENEKQIRKSFQNMWLSSLNGELSLKLYKKILLVIHKRV  267 (505)
T ss_pred             hhhcccc------------------------------CccccccHHHHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHH
Confidence            2233321                              1111222356799999999999999999999999999999999


Q ss_pred             hccccChhhHhhHHHHhhh-cCCchHHHHHHHHHHHHHhcCCCcchHHHHHHHhhCcCccccchhHHHHHHHHHHhcCCC
Q 011894          177 IPFLSNPIMLCDFLTRSYD-IGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPL  255 (475)
Q Consensus       177 ~phl~np~ll~DFLt~~~d-~gg~isllAL~~LF~Li~~~Nld~~rFY~~LY~LLdP~l~~s~~ra~Fl~LL~~~Lks~~  255 (475)
                      +||+..|..+|||||++|| .||++||+||+|||+||++||++||.||.+||+||+|++||.|||+|||+|+|.||+|+|
T Consensus       268 ip~l~~P~kl~DFLtdsyd~~~g~vslLALngLF~Lm~khNleYP~FY~KLY~Ll~Pslfh~KyRarff~L~D~FLSSTH  347 (505)
T KOG2154|consen  268 IPHLISPTKLMDFLTDSYDDIGGVVSLLALNGLFILMTKHNLEYPDFYEKLYALLNPSLFHVKYRARFFRLADLFLSSTH  347 (505)
T ss_pred             hHhhcChHHHHHHHHHHHhccCCchhHHHHhHHHHHHHHcCCCCchHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccc
Confidence            9999999999999999999 899999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhCccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCC
Q 011894          256 LPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPG  335 (475)
Q Consensus       256 Lp~~RVAAFiKRLlqlaL~aPp~~~~~iL~lI~nLLkrhP~l~~Ll~~~~~~~~~~~~~~~ege~~d~~~~~~~~~~~~~  335 (475)
                      ||+++||||+|||+|+||.+||.+++.+|+||+||++|||+|+.|+|++...+                         ..
T Consensus       348 Lpa~LvAsFlKrLaRlaL~APpeA~~~vipfI~Nll~rHp~c~~lvhr~~~~~-------------------------~~  402 (505)
T KOG2154|consen  348 LPAYLVASFLKRLARLALEAPPEAIVIVIPFICNLLRRHPNCQPLVHRSHALS-------------------------LY  402 (505)
T ss_pred             chHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHhCCchhhhhccccccc-------------------------CC
Confidence            99999999999999999999999999999999999999999999999987532                         24


Q ss_pred             CCCCCCCCCCCcCCCCCcchHHHHHHHhhccChHHHHHHHHhhhcccccccccccccCCCCCCcHHHHHHHHHhccCC-C
Q 011894          336 IDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVK-Q  414 (475)
Q Consensus       336 ~d~Ydp~~rDP~~snA~~SsLWEL~~L~~HyHPsVa~~A~~l~~~~~i~~k~~~y~~~dfld~sy~~lld~e~~k~~k-~  414 (475)
                      .||||+++.||..++|++||||||.+||.||||+|+..|+.+.+++++    ++|+++|++|++|..++|+|++++.| .
T Consensus       403 ~Dpfd~~EtDP~ks~ALeSSLWEL~~Lq~Hy~p~Va~~A~~~~q~~~k----~ef~~ed~ld~~y~~l~d~el~~kgk~~  478 (505)
T KOG2154|consen  403 DDPFDNDETDPKKSGALESSLWELELLQTHYHPEVAKAASFFNQSLYK----PEFGLEDGLDSKYSVLQDGELSRKGKRF  478 (505)
T ss_pred             CCCCCCCCCChhhhhhHHHHHHHHHHHHHhhcHHHHHHHHHHhccCcc----ccccCcchhhhhhHHhhcchhhcccCCC
Confidence            599999999999999999999999999999999999999999999886    58999999999999999999999998 5


Q ss_pred             CCcccccCCCCCCCCC
Q 011894          415 VPLAFYKTTPTSLFSD  430 (475)
Q Consensus       415 ~p~~~~~~~p~~lf~~  430 (475)
                      +|+.|.+  ++++++.
T Consensus       479 p~lefe~--~t~~~g~  492 (505)
T KOG2154|consen  479 PPLEFER--RTGLGGR  492 (505)
T ss_pred             CCccccc--ccccCCc
Confidence            5555555  7899887

>KOG2038 consensus CAATT-binding transcription factor/60S ribosomal subunit biogenesis protein [Translation, ribosomal structure and biogenesis; Transcription]

Probab=100.00  E-value=7.7e-49  Score=420.57  Aligned_cols=253  Identities=26%  Similarity=0.380  Sum_probs=219.6

Q ss_pred             HHHHHHHHHHHHhccCCCC-----hhhHHHHHHHhhhhhhccccChhhHhhHHHHhhhcCCchHHHHHHHHHHHHHhcCC
Q 011894          143 KMKSKFTKAWITFLRLPLP-----VDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGL  217 (475)
Q Consensus       143 ~~k~~~~~awL~~Lk~~lp-----~~l~k~vL~~L~k~i~phl~np~ll~DFLt~~~d~gg~isllAL~~LF~Li~~~Nl  217 (475)
                      +..+++.+|.|||+|||+|     .+.+......|++  +.|.+|      |+|         |||||++|||++....+
T Consensus       468 e~nsrllSAlLTGvNRAfPfaq~~ddk~~~~~~tLFk--l~HssN------FNT---------sVQaLmLlfQvs~~~~~  530 (988)
T KOG2038|consen  468 ELNSRLLSALLTGVNRAFPFAQTADDKLEEQMKTLFK--LTHSSN------FNT---------SVQALMLLFQVSKKNDY  530 (988)
T ss_pred             hhhHHHHHHHHhcccccCCcccCchHHHHHHhHHHHH--HHhhcc------cch---------hHHHHHHHHHHHHhhhh
Confidence            5688999999999999987     5799999999999  999999      997         99999999999999999


Q ss_pred             CcchHHHHHHH-hhCcCccccchhHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhCcc
Q 011894          218 EYPNFYEKLYA-LLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPS  296 (475)
Q Consensus       218 d~~rFY~~LY~-LLdP~l~~s~~ra~Fl~LL~~~Lks~~Lp~~RVAAFiKRLlqlaL~aPp~~~~~iL~lI~nLLkrhP~  296 (475)
                      .++|||++||+ ||||+++.++++++|++||+++|+.|. ++.||+||||||+|||++.+|+++||+|.++++|++..|.
T Consensus       531 vSDRyY~aLY~kLLdP~l~~sSKq~m~LnLlykslK~D~-ni~RV~AFvKRlLQVa~~q~P~~i~G~l~Llsel~Karp~  609 (988)
T KOG2038|consen  531 VSDRYYRALYRKLLDPRLMNSSKQAMFLNLLYKSLKEDI-NIQRVRAFVKRLLQVAVQQQPPFICGILFLLSELLKARPT  609 (988)
T ss_pred             hHHHHHHHHHHHhcCcccCchHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHhcCCchhHhHHHHHHHHHHhcch
Confidence            99999999999 999999999999999999999999997 9999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCC--------CCc--------hhHHHHHH---------hhh-----h--------hcccCCCCCCCC
Q 011894          297 INCLLHREDGNETHN--------DDS--------KAEKEIVD---------AAT-----V--------ANISSIKPGIDH  338 (475)
Q Consensus       297 l~~Ll~~~~~~~~~~--------~~~--------~~ege~~d---------~~~-----~--------~~~~~~~~~~d~  338 (475)
                      ++.|+.+.+..+.+.        ++.        +.+|..++         +..     .        .+. .++...++
T Consensus       610 l~~lv~~~~~~D~e~dv~~~~e~DD~deek~vd~Dke~~~vdk~~~e~~~~e~ds~s~k~E~~~~~~~d~~-~~~~~~~~  688 (988)
T KOG2038|consen  610 LRKLVVNSEDIDPEEDVVAQMENDDVDEEKKVDLDKEGKEVDKNGVEEEVEEEDSVSEKKEDLDKKKVDPI-GARGAKTP  688 (988)
T ss_pred             HHHHhhCCcccChhhhhhhhhcccccchhhhccccccceeecccccccccccccccccchhhhhhhhcccc-ccccCCCC
Confidence            999987655432211        011        11111110         000     0        000 12345579


Q ss_pred             CCCCCCCCcCCCCCcchHHHHHHHhhccChHHHHHHHHhhhcccccccccccccCCCCCCcHHHHHHHHHhccCCCCCcc
Q 011894          339 FDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLA  418 (475)
Q Consensus       339 Ydp~~rDP~~snA~~SsLWEL~~L~~HyHPsVa~~A~~l~~~~~i~~k~~~y~~~dfld~sy~~lld~e~~k~~k~~p~~  418 (475)
                      |||.+|||.||||..||||||..|.+||||+|+.||+.|.+|..|+     |+++|+.|||++.||||++.|.+|++.-+
T Consensus       689 YD~r~R~P~f~nAd~tslWEl~~ls~HfHPSVa~~Akall~G~~i~-----y~g~~L~dfTL~~FLDrF~yRnPK~~t~~  763 (988)
T KOG2038|consen  689 YDPRKRNPLFCNADHTSLWELLLLSKHFHPSVATFAKALLEGEEIQ-----YGGPPLNDFTLMAFLDRFAYRNPKQVTKA  763 (988)
T ss_pred             CCcccCCccccCCccchHHHHHHHhhhcCchHHHHHHHHhcCceee-----cCCCchhHHHHHHHHHHHHhcCccccccc
Confidence            9999999999999999999999999999999999999999999985     99999999999999999999999988766


Q ss_pred             c
Q 011894          419 F  419 (475)
Q Consensus       419 ~  419 (475)
                      .
T Consensus       764 ~  764 (988)
T KOG2038|consen  764 R  764 (988)
T ss_pred             C
Confidence            4

>PF03914 CBF: CBF/Mak21 family; InterPro: IPR005612 This domain is present in the CAATT-binding protein which is essential for growth and necessary for 60S ribosomal subunit biogenesis

Probab=100.00  E-value=1.5e-40  Score=307.82  Aligned_cols=162  Identities=41%  Similarity=0.702  Sum_probs=143.2

Q ss_pred             hHHHHHHHHHHHHHhcCCCcchHHHHHHHhh-CcCccccchh-HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhccCCh
Q 011894          200 VSVMALSSLFILMTQHGLEYPNFYEKLYALL-VPSIFMAKHR-AKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPP  277 (475)
Q Consensus       200 isllAL~~LF~Li~~~Nld~~rFY~~LY~LL-dP~l~~s~~r-a~Fl~LL~~~Lks~~Lp~~RVAAFiKRLlqlaL~aPp  277 (475)
                      ++|+||.++|+|++++|+|+++||++||++| +|..++++++ .+||++++++|+++++|..|||||||||+|+|+++||
T Consensus         1 ~~i~al~~l~~l~~~~n~d~~~FY~~LY~~L~~p~~~~~~~~~~~~l~lL~~~l~~~~~~~~rvaAFiKRLl~~sl~~~~   80 (164)
T PF03914_consen    1 TCIQALFLLFQLLSGQNIDLDRFYRALYSLLLDPELFSSSDKSALLLNLLDKSLKSDHLPIQRVAAFIKRLLQLSLHLPP   80 (164)
T ss_pred             CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHcchhhccccchHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHcCCH
Confidence            4899999999999999999999999999966 9999998865 5599999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCCCCCCCcCCCCCcchHH
Q 011894          278 SGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLW  357 (475)
Q Consensus       278 ~~~~~iL~lI~nLLkrhP~l~~Ll~~~~~~~~~~~~~~~ege~~d~~~~~~~~~~~~~~d~Ydp~~rDP~~snA~~SsLW  357 (475)
                      ++++++|.+|++|+++||.|+.|+++++...+  .+.+++++            .....++|+|+++||++|||..|+||
T Consensus        81 ~~~~~~L~~i~~ll~~~p~l~~ll~~~~~~~~--~~~~~~~~------------~~~~~~~Y~p~~~dP~~~~a~~s~lW  146 (164)
T PF03914_consen   81 SFALAILALIRKLLKRHPNLKSLLDNEEKKAD--SGSEEEDE------------EDKSEDKYDPEKRDPEFSNALASSLW  146 (164)
T ss_pred             HHHHHHHHHHHHHHHHCHHHHHHhcCCccccc--cchhhccc------------ccccccccCcCCCCHhHcCCchhHHH
Confidence            99999999999999999999999988765321  01111111            12356799999999999999999999


Q ss_pred             HHHHHhhccChHHHHHHH
Q 011894          358 EIDTLRHHYCPPVSRFVL  375 (475)
Q Consensus       358 EL~~L~~HyHPsVa~~A~  375 (475)
                      ||.+|++||||+|+.+|+
T Consensus       147 EL~lL~~H~hP~V~~~A~  164 (164)
T PF03914_consen  147 ELNLLRNHYHPSVRQFAR  164 (164)
T ss_pred             HHHHHHHCCCcHHHHHhC
Confidence            999999999999999985

Other proteins containing this domain stimulate transcription from the HSP70 promoter.

>COG5593 Nucleic-acid-binding protein possibly involved in ribosomal biogenesis [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=1.2e-30  Score=272.34  Aligned_cols=253  Identities=23%  Similarity=0.210  Sum_probs=207.6

Q ss_pred             HHHHHHHHHHHHHhccCCCC-----hhhHHHHHHHhhhhhhccccChhhHhhHHHHhhhcCCchHHHHHHHHHHHHHhcC
Q 011894          142 KKMKSKFTKAWITFLRLPLP-----VDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHG  216 (475)
Q Consensus       142 ~~~k~~~~~awL~~Lk~~lp-----~~l~k~vL~~L~k~i~phl~np~ll~DFLt~~~d~gg~isllAL~~LF~Li~~~N  216 (475)
                      .+..+.+.++.|+|+||+.|     ...++.+..+|++  +.|-.+      |+|         ++|||++++|..-..-
T Consensus       362 ~eknS~~~savLtG~nRa~pfa~l~~~~~~~Hm~tlfk--ith~~~------fnt---------s~qalmli~q~~~~~~  424 (821)
T COG5593         362 TEKNSFYGSAVLTGCNRAGPFALLFRNAVKSHMMTLFK--ITHEFL------FNT---------SEQALMLIDQEFYRFL  424 (821)
T ss_pred             HhhhhHHHHHHHhcccccCchhhhhHHHHHHHHHHHHh--hhhhhh------hhH---------HHHHHHHHHHHHHHHh
Confidence            44567889999999999865     6888999999999  999988      886         9999999999999999


Q ss_pred             CCcchHHHHHHH-hhCcCccccchhHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhcc-CChhHHHHHHHHHHHHHHhC
Q 011894          217 LEYPNFYEKLYA-LLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSIL-VPPSGALVIMALIHNLLRRH  294 (475)
Q Consensus       217 ld~~rFY~~LY~-LLdP~l~~s~~ra~Fl~LL~~~Lks~~Lp~~RVAAFiKRLlqlaL~-aPp~~~~~iL~lI~nLLkrh  294 (475)
                      ++++|||+.||. |+||.+..+++++.+++|++++|+-+. ++.||-||+||++|+|-+ +.+++..+....+.+|-+.-
T Consensus       425 l~SdryY~~lYesl~dprls~ssKqgiylnllykSL~vd~-nV~rv~af~kr~lQv~S~w~~~p~~tg~f~~l~ql~~a~  503 (821)
T COG5593         425 LDSDRYYTPLYESLIDPRLSESSKQGIYLNLLYKSLRVDT-NVHRVDAFRKRALQVISGWMVLPFDTGDFMSLLQLEMAC  503 (821)
T ss_pred             hccchhhhhHHHHHhhhhhhcccccchhHHHHHHHHHHhc-CchHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHh
Confidence            999999999999 999999999999999999999999998 889999999999999754 45678888888899999999


Q ss_pred             ccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHHhhccChHHHHHH
Q 011894          295 PSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFV  374 (475)
Q Consensus       295 P~l~~Ll~~~~~~~~~~~~~~~ege~~d~~~~~~~~~~~~~~d~Ydp~~rDP~~snA~~SsLWEL~~L~~HyHPsVa~~A  374 (475)
                      |.++.|+.+.+-+=  +.+++.+++..|         .......||..+|||.++||..|||||+..+.+||||+|..+|
T Consensus       504 ~~lk~l~tn~~vd~--e~e~d~~eeq~d---------kd~krkeydgrkrdpk~anae~s~lwei~~finhfhptv~~~a  572 (821)
T COG5593         504 GDLKNLLTNTPVDY--EYESDAEEEQGD---------KDIKRKEYDGRKRDPKFANAEKSSLWEINNFINHFHPTVKTYA  572 (821)
T ss_pred             HHHHHHhcCCCccc--ccccchhhhhcc---------cchhhhhccCcccCcccccccccchhhhhhhhhhcccHHHHHH
Confidence            99999998765421  111222211100         1112346999999999999999999999999999999999999


Q ss_pred             HHhhhcccccccccccccCCCCCCcHHHHHHHHHhccCCCCCcccccCCCCCCCC
Q 011894          375 LSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFS  429 (475)
Q Consensus       375 ~~l~~~~~i~~k~~~y~~~dfld~sy~~lld~e~~k~~k~~p~~~~~~~p~~lf~  429 (475)
                      +.+..|..+-.|      -++-=||+..|||+++.|..|+-..+--..|-+-||+
T Consensus       573 ~a~v~ge~~i~k------p~l~l~tl~hfldrf~yr~~kqt~~arg~simqpl~~  621 (821)
T COG5593         573 NAYVTGEEQIAK------PDLGLFTLSHFLDRFVYRSAKQTNTARGTSIMQPLFS  621 (821)
T ss_pred             HHhhhhhhhhcC------CCcchhhHHHHHHHHHhcCcccccccccchhhhhhhc
Confidence            999998864222      2444589999999999999987766654333344454

>COG5117 NOC3 Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis / Intracellular trafficking and secretion]

Probab=99.84  E-value=6e-20  Score=190.18  Aligned_cols=205  Identities=20%  Similarity=0.247  Sum_probs=173.7

Q ss_pred             HHHHHHHHHhccCCCChhhHHHHHHHhhhhhhccccChhhHhhHHHHhhhc---------CC---chHHHHHHHHHHHHH
Q 011894          146 SKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDI---------GG---VVSVMALSSLFILMT  213 (475)
Q Consensus       146 ~~~~~awL~~Lk~~lp~~l~k~vL~~L~k~i~phl~np~ll~DFLt~~~d~---------gg---~isllAL~~LF~Li~  213 (475)
                      +..+..||.+|+. -..++++.||+||.+  +.||.||++++|||...|..         |.   .-+++|+...|.|++
T Consensus       406 kiif~~Yf~vLk~-~~k~lig~vleGl~k--~~~~~n~eflGD~Levl~eL~~d~~~dk~ss~a~r~alLcI~tAF~i~S  482 (657)
T COG5117         406 KIIFRLYFMVLKG-DRKDLIGYVLEGLVK--YRKIINPEFLGDLLEVLYELLNDNPLDKISSDARRQALLCILTAFEIAS  482 (657)
T ss_pred             HHHHHHHHHHHhc-chHHHHHHHHHHHHH--HHhhcCHHHHhHHHHHHHHHHcCCchhhhhHHHHHHHHHHhhHHHHHhh
Confidence            4556678888874 346799999999999  99999999999999998853         21   357889999999886


Q ss_pred             h-----cCCCcchHHHHHHHhhCcCcccc--------------------------chhHHHHHHHHH-HhcCCCChHHHH
Q 011894          214 Q-----HGLEYPNFYEKLYALLVPSIFMA--------------------------KHRAKFFELLDS-CLRSPLLPAYLA  261 (475)
Q Consensus       214 ~-----~Nld~~rFY~~LY~LLdP~l~~s--------------------------~~ra~Fl~LL~~-~Lks~~Lp~~RV  261 (475)
                      .     .|+|.+.|-..||+++.|--+..                          ....+++..++. |+++......|.
T Consensus       483 ~t~ygk~n~Dl~~fVd~lY~~v~p~~l~pD~dLn~k~~RL~DP~~~~~~~~VN~tt~~e~LlK~~~~~Ffksk~~~~~r~  562 (657)
T COG5117         483 ATLYGKENYDLGGFVDLLYSMVHPMNLEPDADLNLKIKRLKDPDAPSKPFVVNATTDNEELLKIVRLLFFKSKQPVHRRH  562 (657)
T ss_pred             hhhhhhccccHHHHHHHHHHHhCcccCCcchhhhhhhhhhcCCcccccCccccccccHHHHHHHHHHHheeccCchHHHH
Confidence            4     58999999999999764421111                          233567777654 778888788899


Q ss_pred             HHHHHHHHHHhccCChhHHHHHHHHHHHHHHhCccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCC
Q 011894          262 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDD  341 (475)
Q Consensus       262 AAFiKRLlqlaL~aPp~~~~~iL~lI~nLLkrhP~l~~Ll~~~~~~~~~~~~~~~ege~~d~~~~~~~~~~~~~~d~Ydp  341 (475)
                      .+|-|||+-.|.+.|..+..++|.++..|+.|+|.|..|..++.+                           .|.|.|+|
T Consensus       563 ~~f~krl~~c~s~~pe~~~~ail~~~~kl~~rys~~s~l~~sE~~---------------------------ig~g~~~~  615 (657)
T COG5117         563 VIFKKRLLYCCSRSPEEFKGAILDISAKLDIRYSDCSNLKCSEFD---------------------------IGAGNVDS  615 (657)
T ss_pred             HHHHHHHHHHHccChHHHHHHHHHHHHHHHhhhhhccCccCchhh---------------------------cCCccccc
Confidence            999999999999999999999999999999999999999988765                           37799999


Q ss_pred             CCCCCcCCCCCcchHHHHHHHhhccChHHHHHHHHhhhc
Q 011894          342 EESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLEND  380 (475)
Q Consensus       342 ~~rDP~~snA~~SsLWEL~~L~~HyHPsVa~~A~~l~~~  380 (475)
                      ...||..+|.....|||-.+|.+||+|.|.+-|+.++..
T Consensus       616 ~~~nP~~SN~~tA~l~e~fLlk~hy~P~Vsq~~k~L~~~  654 (657)
T COG5117         616 IPSNPDLSNSSTAVLFEYFLLKQHYSPAVSQSAKELLKS  654 (657)
T ss_pred             CCCCcccCCchhHHHHHHHHHHhhcCHHhHHHHHHHHhh
Confidence            999999999999999999999999999999999998763

>KOG2153 consensus Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.70  E-value=2.5e-16  Score=169.22  Aligned_cols=213  Identities=18%  Similarity=0.204  Sum_probs=167.0

Q ss_pred             HHHHHHHHhccCCCChhhHHHHHHHhhhhhhccccChhhHhhHHHHhhhc------CCchHHHHHHHHHHHHHh----cC
Q 011894          147 KFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDI------GGVVSVMALSSLFILMTQ----HG  216 (475)
Q Consensus       147 ~~~~awL~~Lk~~lp~~l~k~vL~~L~k~i~phl~np~ll~DFLt~~~d~------gg~isllAL~~LF~Li~~----~N  216 (475)
                      ..+.+|+.+|+...-. ++..+|+||++  +.|++|++++.|++...-.+      +..-+++|++++|.|++.    .|
T Consensus       460 iVFtiYFrILkn~~~t-ll~~vlEGlak--f~h~invef~~dll~vlk~ll~d~~~~~re~l~cvqtaf~IlS~qg~~ln  536 (704)
T KOG2153|consen  460 IVFTIYFRILKNDRYT-LLGAVLEGLAK--FAHLINVEFLGDLLKVLKELLEDIELSYREALLCVQTAFCILSGQGEKLN  536 (704)
T ss_pred             HHHHHHHHHHhcchhh-HHHHHHhhHHH--HhhhccHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccceeec
Confidence            4455899999876555 99999999999  99999999999998755432      345789999999999976    58


Q ss_pred             CCcchHHHHHHHhhCcCccccch--hHHHHHHHHHHh-cCCCChHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHh
Q 011894          217 LEYPNFYEKLYALLVPSIFMAKH--RAKFFELLDSCL-RSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRR  293 (475)
Q Consensus       217 ld~~rFY~~LY~LLdP~l~~s~~--ra~Fl~LL~~~L-ks~~Lp~~RVAAFiKRLlqlaL~aPp~~~~~iL~lI~nLLkr  293 (475)
                      +|+.+||..||+++-|--....+  -.+.++++|..+ ++.. |..+|.+|++||+..+++.-+...+    .+...+..
T Consensus       537 iD~~~fv~~lY~~l~~~~~~~~~~~~~~ilr~~d~~~~k~r~-~v~~~~~~~~~Ll~~~~h~~~~s~~----~s~~~~~~  611 (704)
T KOG2153|consen  537 IDLGKFVDHLYKMLFPMNLGPDDDGFAIILRLLDPLLIKIRK-PVVNVITKMERLLKCSLHVFFNSKL----ISKYRDIE  611 (704)
T ss_pred             cCHHHHHHHHHHHhcccccCCCcchHHHHHHHhhHhhhhhhh-hHHHHHHHHHHHHHHHHHHhhcccc----hHHHHHHH
Confidence            89999999999987664333222  357899999875 5666 8888999999999999998765554    45566666


Q ss_pred             CccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHHhhccChHHHHH
Q 011894          294 HPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRF  373 (475)
Q Consensus       294 hP~l~~Ll~~~~~~~~~~~~~~~ege~~d~~~~~~~~~~~~~~d~Ydp~~rDP~~snA~~SsLWEL~~L~~HyHPsVa~~  373 (475)
                      .+.|..|+.++                                        -|++|++....|||+.+++  |||.|+.+
T Consensus       612 fsk~~~~~~~~----------------------------------------~pe~~s~a~~al~e~~l~r--y~~~~~~~  649 (704)
T KOG2153|consen  612 FSKRLNLLDSE----------------------------------------TPEYCSIASLALFEKLLLR--YHPISRLM  649 (704)
T ss_pred             hhhhhhhhhcc----------------------------------------CccccccccHHHHHHHHHh--cchHHHHH
Confidence            77776665432                                        1899999999999999999  99999999


Q ss_pred             HHHhhhcccccccccccccCCCCCCcHHHHHHHHHhcc
Q 011894          374 VLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRR  411 (475)
Q Consensus       374 A~~l~~~~~i~~k~~~y~~~dfld~sy~~lld~e~~k~  411 (475)
                      |..+.-|.+.-  +..-.--++...|.+.+|+..+-+.
T Consensus       650 a~~~~~G~~~~--~~~a~~p~~s~~sa~~L~~~~~~~~  685 (704)
T KOG2153|consen  650 ASEIAIGVGAT--GEGALPPELSNLSAAELFEQDLLEM  685 (704)
T ss_pred             HHHHhhcCCcc--CcCCCCccccCchHHHHhhhHHHHh
Confidence            99998888752  1222233456678999999988766

>KOG2153 consensus Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.94  E-value=2.4e-05  Score=85.75  Aligned_cols=146  Identities=25%  Similarity=0.321  Sum_probs=108.7

Q ss_pred             HHHHHHHHhcCCC--cchHHHHHHHhhCcCccccc--------hhHHHHHHH-HHHhcCCCChHHHHHHHHHHHHHHhcc
Q 011894          206 SSLFILMTQHGLE--YPNFYEKLYALLVPSIFMAK--------HRAKFFELL-DSCLRSPLLPAYLAAAFVKKLSRLSIL  274 (475)
Q Consensus       206 ~~LF~Li~~~Nld--~~rFY~~LY~LLdP~l~~s~--------~ra~Fl~LL-~~~Lks~~Lp~~RVAAFiKRLlqlaL~  274 (475)
                      .++|-++-..|++  -+.||.-| +++||.+...+        .+-+++.+. ..+..+.....+|..+|-||+.-++.+
T Consensus       544 ~~lY~~l~~~~~~~~~~~~~~il-r~~d~~~~k~r~~v~~~~~~~~~Ll~~~~h~~~~s~~~s~~~~~~fsk~~~~~~~~  622 (704)
T KOG2153|consen  544 DHLYKMLFPMNLGPDDDGFAIIL-RLLDPLLIKIRKPVVNVITKMERLLKCSLHVFFNSKLISKYRDIEFSKRLNLLDSE  622 (704)
T ss_pred             HHHHHHhcccccCCCcchHHHHH-HHhhHhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhhhhhhhhcc
Confidence            3455555544443  44555443 45665432211        122333322 344467778999999999999999999


Q ss_pred             CChhHHHHHHHHHHHHHHhCccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCCCCCCCcCCCCCcc
Q 011894          275 VPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRS  354 (475)
Q Consensus       275 aPp~~~~~iL~lI~nLLkrhP~l~~Ll~~~~~~~~~~~~~~~ege~~d~~~~~~~~~~~~~~d~Ydp~~rDP~~snA~~S  354 (475)
                      .|.....+.++|+-.+|-|++.+-.++..+..                           .|.+.|.+...+|+.+|...+
T Consensus       623 ~pe~~s~a~~al~e~~l~ry~~~~~~~a~~~~---------------------------~G~~~~~~~a~~p~~s~~sa~  675 (704)
T KOG2153|consen  623 TPEYCSIASLALFEKLLLRYHPISRLMASEIA---------------------------IGVGATGEGALPPELSNLSAA  675 (704)
T ss_pred             CccccccccHHHHHHHHHhcchHHHHHHHHHh---------------------------hcCCccCcCCCCccccCchHH
Confidence            99999999999999999998887777765543                           377899999999999999999


Q ss_pred             hHHHHHHHhhccChHHHHHHHHhhh
Q 011894          355 SLWEIDTLRHHYCPPVSRFVLSLEN  379 (475)
Q Consensus       355 sLWEL~~L~~HyHPsVa~~A~~l~~  379 (475)
                      .|||-.+|+.||+|+|..-++.+..
T Consensus       676 ~L~~~~~~~~~~~P~v~~~~kql~~  700 (704)
T KOG2153|consen  676 ELFEQDLLEMHYNPTVPLSLKQLYK  700 (704)
T ss_pred             HHhhhHHHHhccCCCCCchHHHHHH
Confidence            9999999999999999887776654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	475
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 2e-05
 Identities = 63/339 (18%), Positives = 104/339 (30%), Gaps = 108/339 (31%)

Query: 15  SVTDFLASKYFKYIDVRY----FT----------YISMEK------------LARSLEGK 48
            VTDFL++    +I + +     T          Y+                   S+  +
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE 335

Query: 49  GISDDKT---GSADENSESHSRASIELSL--------RKSYYILS------KIPSMEDNN 91
            I D           N +  +   IE SL        RK +  LS       IP      
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTI-IESSLNVLEPAEYRKMFDRLSVFPPSAHIP------ 388

Query: 92  EKSEHEMWSGSGSSSEEGNLKEASKKS-------KTKVKMP------KAEKSNNNALSAA 138
                 +W     S     + +  K S       ++ + +P      K +  N  AL  +
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS 448

Query: 139 IISKKMKSKFTKAWITFLRLPLPVDIY-------------KEVLVTLHRAVIPFLSNPIM 185
           I+         K + +   +P  +D Y                 +TL R V  FL     
Sbjct: 449 IVDHY---NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV--FLD---- 499

Query: 186 LCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEK-------LYALLVPSI--FM 236
              FL +        +  A  S+   + Q  L+   FY+         Y  LV +I  F+
Sbjct: 500 -FRFLEQKIRHDS-TAWNASGSILNTLQQ--LK---FYKPYICDNDPKYERLVNAILDFL 552

Query: 237 AKH-----RAKFFELLDSCLRSPLLPAYLAAAFVKKLSR 270
            K       +K+ +LL   L +     +  A   K++ R
Sbjct: 553 PKIEENLICSKYTDLLRIALMAEDEAIFEEAH--KQVQR 589

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00