Citrus Sinensis ID: 011897


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-----
MLALAAHALAENKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD
cccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHccEEEcccccccccccccccccccccHHHHHHHccccEEEEccccHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHccEEEEEccccccccccccHHHccHHcccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHccccccccEEEEEEcHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccccccccHHHHccccccccHHHHHHHHHHcccccccEEEEEEEEEEccccccHHHHHHcccccHHccccccccccccccccccccccEEEEEccccEEEEcccccHHHHHHHHcEEcccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccc
ccHHHHHHHcccccccHHHccccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHEEcccccccccccccccHHHHccHHHHHHHHHHHcEHHHcccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccEEEEccccHHHccccccHHHHHHEEHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccHHHcccccccccccccccccccccEEEEEEEEcccEEEEEcccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHcccccccHHHHHHHHHHcccccccEEEEEEcEEccccHHHHHHHHHccccccHHHcccHHHHHHccccHHHHHHHHHHEEccccEEEEccccccHHHHHHHHHHHccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccEEEcccccccccccc
MLALAAHALAenkrepkdlwrepvvpasawmpcadqrnwepsggnngYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMyssvwrdvsqfsdiyQEEHfinyltpdiRMVKELPNklqsldleaigsvvtdvdipkeskpsfylkniipillRNGVVHLLGfgnrlafdpipfqLQRLRCRcnfhalqfaPKIQETGALLLRRLRkheghsgpldhylvgpyadsimkekrgqsaKASRYLAIHLRFEIDMVAHSLcefgggeeeRQELEKYREIHFPALAHlkkttklpspaeirseglcpltpEEAVLMLAALGFNRKTHVFVAGaqiyggtrrlgalnslypylvtkenllsatelepfknfssQLAALDFIGCTaanafamtdsgsqlSSLVSGYriyygggkmptirpnKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKhiqsrskgrsvyryprckecmcptd
MLALAAHAlaenkrepkdlwrePVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSvvtdvdipkeskpsfYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEghsgpldhylvGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALahlkkttklpspaEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAmtdsgsqlSSLVSGYRIYYGggkmptirpnKRRLAAIFVKNSTIEWKVFEQRVRKavrqtkhiqsrskgrsvyryprckecmcptd
MLALAAHALAENKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCefgggeeerqelekyreIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD
******************LWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSI**********ASRYLAIHLRFEIDMVAHSLCEFGGG******LEKYREIHFPALAHLKK************EGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVR*************VYRYPRCKE******
************************VPASAW*****************YILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKH***********VGPYA************KASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTK*******RSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFE***********************RYPRCKECMCPT*
MLALAAHALAENKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMK*********SRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVR*****************VYRYPRCKECMCPTD
*****AHALAENKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHE*HSGPLDHY*VGPYADSIMKEK****AKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCP**
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MLALAAHALAENKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query475 2.2.26 [Sep-21-2011]
Q8W486519 Uncharacterized protein A no no 0.793 0.726 0.327 3e-56
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1 Back     alignment and function desciption
 Score =  219 bits (559), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/433 (32%), Positives = 226/433 (52%), Gaps = 56/433 (12%)

Query: 20  WREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLV 79
           WR    P S W P        P+   NGY+ V  NGG+NQQR AICNAV+ AR++NATLV
Sbjct: 71  WRPSSAPRSDWPP--------PTKETNGYLRVRCNGGLNQQRSAICNAVLAARIMNATLV 122

Query: 80  VPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDI 139
           +P+   +S W D S F  IY  EHFI  L  D+++V ++P+  ++   + I +    +  
Sbjct: 123 LPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPDVHKNGKTKKIKAF--QIRP 180

Query: 140 PKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQ 199
           P+++   +YL   +  +  +  ++L  F +RLA +    + QRLRCR N+HAL+F P I 
Sbjct: 181 PRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPHIM 240

Query: 200 ETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAH 259
           +    ++ +LR  +GH                             +++IHLRFE+DM+A 
Sbjct: 241 KLSESIVDKLRS-QGH-----------------------------FMSIHLRFEMDMLAF 270

Query: 260 SLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAA 319
           + C      EE++ L KYR+ +F          K     E R+ G CPLTPEE  L+L A
Sbjct: 271 AGCFDIFNPEEQKILRKYRKENF--------ADKRLIYNERRAIGKCPLTPEEVGLILRA 322

Query: 320 LGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQL--AAL 377
           + F+  T +++A  +++GG + +    +L+P L   +N  S    E     S  L  +A+
Sbjct: 323 MRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRL---DNHSSVDPSEELSATSQGLIGSAV 379

Query: 378 DFIGCTAANAFAMT-DSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWK 436
           D++ C  ++ F  T D  S  ++ + G+R+YYG     TIRP+++ LA IF+     +  
Sbjct: 380 DYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRT--TIRPDRKALAPIFIAREKGKRA 437

Query: 437 VFEQRVRKAVRQT 449
            FE+ VR+ + +T
Sbjct: 438 GFEEAVRRVMLKT 450





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query475
224117960467 predicted protein [Populus trichocarpa] 0.978 0.995 0.827 0.0
224113753465 predicted protein [Populus trichocarpa] 0.978 1.0 0.827 0.0
297741763 717 unnamed protein product [Vitis vinifera] 0.981 0.649 0.804 0.0
359494826 617 PREDICTED: DUF246 domain-containing prot 0.981 0.755 0.804 0.0
356520091 583 PREDICTED: DUF246 domain-containing prot 0.978 0.797 0.812 0.0
255554775 642 conserved hypothetical protein [Ricinus 1.0 0.739 0.828 0.0
356564474 579 PREDICTED: DUF246 domain-containing prot 0.978 0.803 0.804 0.0
357480375 620 hypothetical protein MTR_4g132590 [Medic 0.970 0.743 0.800 0.0
449455459 672 PREDICTED: DUF246 domain-containing prot 0.978 0.691 0.780 0.0
449513539 672 PREDICTED: DUF246 domain-containing prot 0.978 0.691 0.780 0.0
>gi|224117960|ref|XP_002331523.1| predicted protein [Populus trichocarpa] gi|222873747|gb|EEF10878.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  819 bits (2116), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/465 (82%), Positives = 423/465 (90%)

Query: 11  ENKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVL 70
           +NK+EPKDLW+EP VPASAW PCAD R+W PS GNNGYILVTANGGMNQQRVA+CNAVVL
Sbjct: 3   QNKQEPKDLWQEPFVPASAWRPCADHRDWNPSEGNNGYILVTANGGMNQQRVAVCNAVVL 62

Query: 71  ARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAI 130
           ARLLN++LV+P+FMYSSVWRDVSQFS IYQEEHFINYLTPDIR+VKELP +LQSLDLEAI
Sbjct: 63  ARLLNSSLVIPRFMYSSVWRDVSQFSHIYQEEHFINYLTPDIRIVKELPKELQSLDLEAI 122

Query: 131 GSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFH 190
           GS VTDVD+PKES+PSFYLK+I+PILL+N VVH +GFGNRLAFDPIPFQLQRLRCRCNFH
Sbjct: 123 GSTVTDVDVPKESEPSFYLKSILPILLKNRVVHFVGFGNRLAFDPIPFQLQRLRCRCNFH 182

Query: 191 ALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHL 250
           ALQF PKIQETGALLL+RLRKH  H G LDHYL GP+A+  +K K G + KASRYLAIHL
Sbjct: 183 ALQFVPKIQETGALLLQRLRKHATHPGSLDHYLTGPFAEPNLKGKVGHAVKASRYLAIHL 242

Query: 251 RFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTP 310
           RFEIDM+AHSLCE+GGGEEER+ELE YREIHFPAL HLKKTT+L SPA +RSEGLCPLTP
Sbjct: 243 RFEIDMLAHSLCEYGGGEEERKELEAYREIHFPALTHLKKTTELRSPALLRSEGLCPLTP 302

Query: 311 EEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNF 370
           EEAVLMLAALGF RKTH+F+AGA IYGG  RL AL SLYP LVTKE LLSATEL+PF NF
Sbjct: 303 EEAVLMLAALGFRRKTHMFIAGANIYGGRSRLTALTSLYPNLVTKEKLLSATELKPFMNF 362

Query: 371 SSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKN 430
           SSQLAALDFI CTA++AFAMTDSGSQLSSLVSG+RIYYGGGKMPTIRPNKRRLA IF+KN
Sbjct: 363 SSQLAALDFIACTASDAFAMTDSGSQLSSLVSGFRIYYGGGKMPTIRPNKRRLADIFMKN 422

Query: 431 STIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD 475
           +TIEWK+FEQRVRKAVRQTKH+  R K RSVYRYPRCKECMC T+
Sbjct: 423 NTIEWKIFEQRVRKAVRQTKHVFERPKARSVYRYPRCKECMCLTE 467




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113753|ref|XP_002316562.1| predicted protein [Populus trichocarpa] gi|222859627|gb|EEE97174.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297741763|emb|CBI32992.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359494826|ref|XP_002271717.2| PREDICTED: DUF246 domain-containing protein At1g04910-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356520091|ref|XP_003528699.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information
>gi|255554775|ref|XP_002518425.1| conserved hypothetical protein [Ricinus communis] gi|223542270|gb|EEF43812.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356564474|ref|XP_003550479.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information
>gi|357480375|ref|XP_003610473.1| hypothetical protein MTR_4g132590 [Medicago truncatula] gi|357497961|ref|XP_003619269.1| DUF246 domain-containing protein [Medicago truncatula] gi|355494284|gb|AES75487.1| DUF246 domain-containing protein [Medicago truncatula] gi|355511528|gb|AES92670.1| hypothetical protein MTR_4g132590 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449455459|ref|XP_004145470.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449513539|ref|XP_004164352.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query475
TAIR|locus:2027129652 AT1G62330 [Arabidopsis thalian 1.0 0.728 0.725 8.8e-189
TAIR|locus:2008935590 AT1G11990 [Arabidopsis thalian 0.911 0.733 0.675 3.9e-163
TAIR|locus:2029984611 AT1G29200 [Arabidopsis thalian 0.985 0.765 0.538 3.3e-134
TAIR|locus:2049527567 AT2G01480 [Arabidopsis thalian 0.501 0.419 0.353 9.7e-74
TAIR|locus:2079281557 AT3G26370 [Arabidopsis thalian 0.429 0.366 0.369 4.7e-72
TAIR|locus:2130938549 AT4G16650 [Arabidopsis thalian 0.423 0.366 0.389 1.1e-70
TAIR|locus:2006852562 AT1G14970 [Arabidopsis thalian 0.503 0.425 0.348 1.1e-70
TAIR|locus:2121793551 RHS17 "root hair specific 17" 0.406 0.350 0.406 3.7e-70
TAIR|locus:2014666568 AT1G35510 [Arabidopsis thalian 0.410 0.343 0.422 4e-70
TAIR|locus:2168297504 AT5G65470 [Arabidopsis thalian 0.955 0.900 0.350 4.3e-70
TAIR|locus:2027129 AT1G62330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1830 (649.3 bits), Expect = 8.8e-189, P = 8.8e-189
 Identities = 347/478 (72%), Positives = 394/478 (82%)

Query:     1 MLALAAHALAE--NKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMN 58
             +LA AAHALAE  NK EPK+LWREP   A AW PCADQR+W+PS G NGYI+VTANGG+N
Sbjct:   175 LLAYAAHALAEGQNKLEPKELWREPKDQALAWKPCADQRSWKPSDGKNGYIMVTANGGIN 234

Query:    59 QQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKEL 118
             QQRVA+CN VV+AR+LNATLV+PKFM+S VW D SQF DIYQ EHFI YL+PDIR+VK+L
Sbjct:   235 QQRVAVCNIVVVARMLNATLVIPKFMFSDVWTDASQFGDIYQVEHFIKYLSPDIRIVKKL 294

Query:   119 PNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPF 178
             P +LQSLDLEAIGSVVTD+D+ KE+KP FY+K+I+P+LL+N VVH LGFGNRLAFDPIPF
Sbjct:   295 PKELQSLDLEAIGSVVTDIDVMKEAKPGFYMKHILPLLLKNRVVHFLGFGNRLAFDPIPF 354

Query:   179 QLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGP-YADSIMKEKRG 237
             +LQRLRCRCNFHAL F PKIQETGA+L+RRLR    H  P+D YLVGP +A  I+ +K G
Sbjct:   355 ELQRLRCRCNFHALNFVPKIQETGAILVRRLRDSGSHLAPVDPYLVGPKFASFILDKKAG 414

Query:   238 QSAKASRYLAIHLRFEIDMVAHSLCXXXXXXXXXXXXXXXXXIHFPALAHLKKTTKLPSP 297
                KAS+YLA+HLRFEIDMVAHSLC                  HFP LA+L KT K+PSP
Sbjct:   415 PLHKASKYLAVHLRFEIDMVAHSLCYFGGGDAEKAELDAYREKHFPTLANLTKTQKMPSP 474

Query:   298 AEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKEN 357
              ++R+EGLCPL+PEEAVLMLA LGF+RKT VFVAGA IYGG +RL AL SLYP LVTKEN
Sbjct:   475 DDLRTEGLCPLSPEEAVLMLAGLGFSRKTRVFVAGANIYGGNKRLAALTSLYPNLVTKEN 534

Query:   358 LLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIR 417
             +LS TELEPFKNFSSQLA LDFI C A++AFAMTDSGSQLSSLVSGYRIYYG GKMPTIR
Sbjct:   535 VLSQTELEPFKNFSSQLAVLDFIACAASDAFAMTDSGSQLSSLVSGYRIYYGAGKMPTIR 594

Query:   418 PNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD 475
             PNKRR + I +KN+TIEWKVFEQRVRK VRQTKH+  R  GRSVYRYPRCKECMC  D
Sbjct:   595 PNKRRFSDILLKNNTIEWKVFEQRVRKTVRQTKHVLVRPTGRSVYRYPRCKECMCNED 652




GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0008150 "biological_process" evidence=ND
GO:0007020 "microtubule nucleation" evidence=RCA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2008935 AT1G11990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029984 AT1G29200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2049527 AT2G01480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079281 AT3G26370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2006852 AT1G14970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121793 RHS17 "root hair specific 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014666 AT1G35510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168297 AT5G65470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.XI.1485.1
hypothetical protein (462 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query475
cd11299290 cd11299, O-FucT_plant, GDP-fucose protein O-fucosy 1e-140
pfam10250315 pfam10250, O-FucT, GDP-fucose protein O-fucosyltra 1e-110
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 5e-05
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 2e-04
>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily Back     alignment and domain information
 Score =  402 bits (1036), Expect = e-140
 Identities = 153/365 (41%), Positives = 204/365 (55%), Gaps = 76/365 (20%)

Query: 48  YILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINY 107
           Y+LV+ANGG+NQQR  IC+AV +ARLLNATLV+P+   +SVW D S+F DIY  +HFI  
Sbjct: 1   YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60

Query: 108 LTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGF 167
           L  D+R+VK+LP +L S   E     +T   +P  S PS+YL+ ++P+L ++GV+ L  F
Sbjct: 61  LKDDVRVVKKLPEELASKKPE-----ITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPF 115

Query: 168 GNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPY 227
            +RLA D +P ++QRLRCR NFHAL+F P+I+E G  L+ RLR+  G             
Sbjct: 116 DSRLANDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLREAGG------------- 162

Query: 228 ADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAH 287
                            +LA+HLRFE DM+A S C                         
Sbjct: 163 ----------------PFLALHLRFEKDMLAFSGC------------------------- 181

Query: 288 LKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNS 347
                           G CPLTPEE  L+L ALGF R T +++A  +IYGG RRL  L S
Sbjct: 182 ----------------GKCPLTPEEVGLLLRALGFPRSTRIYLAAGEIYGGERRLDPLRS 225

Query: 348 LYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIY 407
           ++P L TKE L +A EL PF   SS+LAALD+I C  ++ F  T  G   +  V+G+R Y
Sbjct: 226 IFPNLYTKETLATAEELAPFSGHSSRLAALDYIVCLESDVFVPTYGG-NFAKAVAGHRRY 284

Query: 408 YGGGK 412
            G  K
Sbjct: 285 LGHRK 289


Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase Back     alignment and domain information
>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information
>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 475
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 100.0
KOG3849386 consensus GDP-fucose protein O-fucosyltransferase 97.97
PF05830321 NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 95.59
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information
Probab=100.00  E-value=8.5e-57  Score=452.54  Aligned_cols=308  Identities=39%  Similarity=0.603  Sum_probs=210.4

Q ss_pred             ecCchhhHHHHHHHHHHHHHHhcCeEeecccccCCcccCCCC-----CCcccchHHHHHhccCCceecccCchhhhhhhh
Q 011897           53 ANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQ-----FSDIYQEEHFINYLTPDIRMVKELPNKLQSLDL  127 (475)
Q Consensus        53 ~nGGlnq~R~~IcdaVavArlLNATLVlP~l~~~s~w~D~S~-----F~dIfD~~hFi~~L~~dVrIvk~LP~~~~~~~~  127 (475)
                      +.||+||||+++++||++|++||+|||||.+...+.|++.++     |+++||+++|+++++.+|.+.+.+|..+.....
T Consensus         6 ~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~   85 (351)
T PF10250_consen    6 CMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFR   85 (351)
T ss_dssp             -SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccc
Confidence            899999999999999999999999999999999999999887     999999999999999999999999877655322


Q ss_pred             hhh------------------------cccccccCCCC-CCChhHHHhhhhHhHhhc------ceEEEecccCCCcCCCC
Q 011897          128 EAI------------------------GSVVTDVDIPK-ESKPSFYLKNIIPILLRN------GVVHLLGFGNRLAFDPI  176 (475)
Q Consensus       128 ~~~------------------------~~~~~~~~~~~-~s~~~~Y~~~ilP~l~k~------~Vi~l~~~~~rLa~~~~  176 (475)
                      ...                        ........... ++.+.+|+++++|.+.++      +|+.|.++..++..+..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  165 (351)
T PF10250_consen   86 LQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYL  165 (351)
T ss_dssp             EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GG
T ss_pred             hhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhccc
Confidence            100                        00011112223 778889998899999987      99999999999998888


Q ss_pred             ChhhhhhcccccccccccchhHHHHHHHHHHHHhcccCCCCCCCcccCCCccchhhhhhhcccccCCceEEEeeehhhhh
Q 011897          177 PFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDM  256 (475)
Q Consensus       177 p~~iQrLRCrvnf~ALrF~p~I~~lg~~lV~Rlr~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ylAlHLR~E~DM  256 (475)
                      +.++||        +|+|.++|+++|++++++++..                             +++|||+|||+|+||
T Consensus       166 ~~~~~r--------~l~~~~~i~~~a~~~i~~~~~~-----------------------------~~~yiavHlR~~~D~  208 (351)
T PF10250_consen  166 DRDLQR--------YLRFSPEIRELADKFIKRLLAG-----------------------------GGPYIAVHLRRGKDW  208 (351)
T ss_dssp             GGGGGG--------G--B-HHHHHHHHHHHHHH---------------------------------SSEEEEEE--SHHH
T ss_pred             CccceE--------EEecCHHHHHHHHHHHHHhhcc-----------------------------cCceEEEeecccCch
Confidence            899988        9999999999999999999931                             268999999999999


Q ss_pred             hhhccccCCCChhHHHHHHHHHHhhhhhhhhhhcCCCCCChHhhhcCCCCcCCHHHHHHHHHHcCCCCCcEEEEEecccc
Q 011897          257 VAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIY  336 (475)
Q Consensus       257 lA~sgC~~gg~~~E~~eL~~~R~~~~p~~~~~~~~~k~i~~~~~R~~G~CPLtPeEvgl~L~alGf~~~T~IYlA~geiy  336 (475)
                        +++|.+++   ++..|+.+|..          ..+.+.+...+..|.||++|++++.+++++|+.+.|.||||++++|
T Consensus       209 --~~~C~~~~---~~~~~~~~~~~----------~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~  273 (351)
T PF10250_consen  209 --FSACEFKG---ERHLLASPRCW----------GKKSINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIY  273 (351)
T ss_dssp             --HHHHCT-T-------TTTHHHH-----------GGGTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS--
T ss_pred             --HhhcccCC---chHHHHHhHhh----------ccccccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCccc
Confidence              88999954   78888888863          1234567778899999999999999999999999999999999999


Q ss_pred             CccccchHHHhhCCCccccccCCCcccccccccccccchhhheeeeccCceeeecCCCCchhhhhhhhhhhccCCCCce
Q 011897          337 GGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPT  415 (475)
Q Consensus       337 Gg~~~m~~L~~~FPnl~tKetL~s~eEL~pf~~~ss~~AALDy~V~~~SDvFv~t~~G~nf~~~V~GhR~y~g~g~~kt  415 (475)
                      ||.++|.+|++.||++++|+++.+.+|+++|.+  .++|+||++||++||+||+|. ||+|+.+|+++|.|.|.+++||
T Consensus       274 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~vD~~i~~~s~~Figt~-~Stfs~~i~~~R~~~g~~~~~~  349 (351)
T PF10250_consen  274 GGERRLDPLKNMFPNVVTKDDLLSHEELEPLND--DQLAMVDQEICSRSDVFIGTC-GSTFSSNIARERHYRGKPKRKS  349 (351)
T ss_dssp             ---------HHHHHHHHGGGT--EE--S-------S--HHHHHHHHHHSSEEEE-T-T-HHHHHHHHHHHHSSSS---E
T ss_pred             ccchhHHHHHHHhhhhEeccccCCHHHhhhccc--cchhHHHHHHHhcCCEEEecC-cchhHHHhhcccCcCCCCCCCC
Confidence            999999999999999999999999999999965  899999999999999999998 6689999999999999766555



Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query475
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-07
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 3e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.4 bits (122), Expect = 5e-07
 Identities = 47/315 (14%), Positives = 86/315 (27%), Gaps = 97/315 (30%)

Query: 66  NAVVLARLLNATL------VVPKFM-------YSSVW-------RDVSQFSDIYQEEH-- 103
           +AV     L  TL      +V KF+       Y  +        R  S  + +Y E+   
Sbjct: 59  DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118

Query: 104 -------FINYLTPDIRMVKELPNKLQSLDLEA---------IG-SVVT-DVDIPKESKP 145
                  F  Y    ++   +L   L  L              G + V  DV        
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV-------- 170

Query: 146 SFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRL--RCRCNFHALQFA----PKIQ 199
                +       +  +  L   N  + + +   LQ+L  +   N+ +            
Sbjct: 171 ---CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 200 ETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKA----------SRYLAIH 249
            +    LRRL K + +   L   LV     ++   +  ++  A          +R+  + 
Sbjct: 228 HSIQAELRRLLKSKPYENCL---LV---LLNV---QNAKAWNAFNLSCKILLTTRFKQVT 278

Query: 250 LRFEIDMVAH-SLCEFGGGEEERQELE---KYREIHFPALAHLKKTTKLPSPAEIRSEGL 305
                    H SL          +      KY +          +   LP      +   
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC---------RPQDLPREVLTTN--- 326

Query: 306 CPLTPEEAVLMLAAL 320
            P      + ++A  
Sbjct: 327 -PR----RLSIIAES 336


>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Length = 362 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query475
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 99.55
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 99.19
2hhc_A330 NODZ, nodulation fucosyltransferase NODZ; glycosyl 96.75
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 96.64
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure
Probab=99.55  E-value=2.2e-14  Score=147.86  Aligned_cols=300  Identities=21%  Similarity=0.183  Sum_probs=163.9

Q ss_pred             CCCCCcEEEEEe-cC-chhhHHHHHHHHHHHHHHhcCe----EeecccccCCcccCC------CCCCcccchHHHHHhcc
Q 011897           42 SGGNNGYILVTA-NG-GMNQQRVAICNAVVLARLLNAT----LVVPKFMYSSVWRDV------SQFSDIYQEEHFINYLT  109 (475)
Q Consensus        42 ~~~~nGyl~v~~-nG-Glnq~R~~IcdaVavArlLNAT----LVlP~l~~~s~w~D~------S~F~dIfD~~hFi~~L~  109 (475)
                      ....++||+-.. .| |+|.||...-.|.++|+.||.|    ||||-...---|+-.      -.|+++||++.+    +
T Consensus        18 ~~~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~   93 (408)
T 4ap5_A           18 AASRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----N   93 (408)
T ss_dssp             --CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----H
T ss_pred             CccccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----H
Confidence            356789999875 45 8999999999999999999999    999976533335443      279999999875    3


Q ss_pred             CCceecccCchhhhhhh-hhhhc-------------cc----------c------cccCCCCCCChhHHH----------
Q 011897          110 PDIRMVKELPNKLQSLD-LEAIG-------------SV----------V------TDVDIPKESKPSFYL----------  149 (475)
Q Consensus       110 ~dVrIvk~LP~~~~~~~-~~~~~-------------~~----------~------~~~~~~~~s~~~~Y~----------  149 (475)
                      ..|+|+..  +++.... +..+.             ..          +      .........++.|=.          
T Consensus        94 ~~vpVI~m--eeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v~~~~~~c  171 (408)
T 4ap5_A           94 KNIPVIEY--EQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETRGLNVSC  171 (408)
T ss_dssp             TTSCEEEH--HHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTCEEEEEEE
T ss_pred             hhCCeeEH--HHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCcccccccccCCcee
Confidence            45566522  2221100 00000             00          0      000000001112211          


Q ss_pred             -------hhhhHhHhhc---ceEEEecccCCCcCCCCChhhhhhcccccccccccchhHHHHHHHHHHHHhcccCCCCCC
Q 011897          150 -------KNIIPILLRN---GVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPL  219 (475)
Q Consensus       150 -------~~ilP~l~k~---~Vi~l~~~~~rLa~~~~p~~iQrLRCrvnf~ALrF~p~I~~lg~~lV~Rlr~~~~~~~~~  219 (475)
                             ..+-|.+.+.   ..+-+..+...|..-.-..+...+|     ..|+|.+.|.+.|++.++..-...    ..
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~~-----r~l~~s~~l~~~a~~fi~~~L~~~----~~  242 (408)
T 4ap5_A          172 LSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTR-----RSMVFARHLREVGDEFRSRHLNST----DD  242 (408)
T ss_dssp             EEECSBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHHH-----HTCCBCHHHHHHHHHHHHHHHCCC----TT
T ss_pred             EEEeecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhHH-----HHhhhhHHHHHHHHHHHHHHhCcc----cc
Confidence                   1122333322   1122222333333111122222222     379999999999999888654321    00


Q ss_pred             CcccCCCccchhhhhhhcccccCCceEEEeeehhhhhhhhccccCCCChhHHHHHHHHHHhhhhhhhhhhcCCCCCChHh
Q 011897          220 DHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAE  299 (475)
Q Consensus       220 ~~~~~g~~~~~~~~~~~~~~~~~~~ylAlHLR~E~DMlA~sgC~~gg~~~E~~eL~~~R~~~~p~~~~~~~~~k~i~~~~  299 (475)
                      .+.+.-+-.-....... ....+++|+|+|+|-+.=+.++..|.                                    
T Consensus       243 ~~h~r~~~dw~~~~~~~-~~~~~~~y~~~H~Rr~d~~~~~~~~~------------------------------------  285 (408)
T 4ap5_A          243 ADRIPFQEDWMKMKVKL-GSALGGPYLGVHLRRKDFIWGHRQDV------------------------------------  285 (408)
T ss_dssp             TTTCCCCSSGGGCCCCT-TCBCCEEEEEEEECCTTTTTTTCSSS------------------------------------
T ss_pred             eeecccchhHhhhhccc-ccccCCCccccccccccchhhhhccC------------------------------------
Confidence            00000000000000001 12235789999999863222322222                                    


Q ss_pred             hhcCCCCcCC---HHHHHHHHHHcCCCCCcEEEEEeccccCccccchHHHhhCCCccccccCCCcccccccccccccchh
Q 011897          300 IRSEGLCPLT---PEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAA  376 (475)
Q Consensus       300 ~R~~G~CPLt---PeEvgl~L~alGf~~~T~IYlA~geiyGg~~~m~~L~~~FPnl~tKetL~s~eEL~pf~~~ss~~AA  376 (475)
                             |-.   .+.+.-+++..+   -+.||||+-+.   +..+..|++.+|.++.-..  ..+++..+  ...++|.
T Consensus       286 -------ps~~~~~~~i~~~~~~~~---~~~VyiATD~~---~~~~~~l~~~~~~~~~~~~--~~~~~~~~--~d~~~a~  348 (408)
T 4ap5_A          286 -------PSLEGAVRKIRSLMKTHR---LDKVFVATDAV---RKEYEELKKLLPEMVRFEP--TWEELELY--KDGGVAI  348 (408)
T ss_dssp             -------CCHHHHHHHHHHHHHHHT---CSCEEEEECCC---HHHHHHHHHHCTTEECCCC--CHHHHHHH--HHHHHHH
T ss_pred             -------CCHHHHHHHHHHHHHhcC---CCEEEEeCCCc---hhHHHHHHHhCCCcEEecC--cchhhhcc--CcchhhH
Confidence                   211   122333344443   34599998643   3456789999998764322  22444444  3356799


Q ss_pred             hheeeeccCceeeecCCCCchhhhhhhhhhhccCC
Q 011897          377 LDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGG  411 (475)
Q Consensus       377 LDy~V~~~SDvFv~t~~G~nf~~~V~GhR~y~g~g  411 (475)
                      ||-+||.+||+||+|..+ +|+..|.-.|.+.|..
T Consensus       349 idq~Ic~~a~~FiGt~~S-tfS~~I~~eR~~~G~~  382 (408)
T 4ap5_A          349 IDQWICAHARFFIGTSVS-TFSFRIHEEREILGLD  382 (408)
T ss_dssp             HHHHHHHTEEEEEBCTTC-HHHHHHHHHHHHHTBC
T ss_pred             HHHHHHHhCCeeEeCCcC-chhHHHHHHHHhcCCC
Confidence            999999999999999855 7999999999999853



>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Back     alignment and structure
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00