Citrus Sinensis ID: 012155

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470
Protein Sequence
MSGSKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGSCSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAREAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQQQQQQQQQQQQHHKLGGRSASGLEELIMGCTSSSDIKEESSMTNPQEAEWLKYSSFWPDPDNQDHHG
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccEEEcccccccEEEccEEEEEEEEEEEEccccccccccccccEEEEcccccccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEcccccccHHHHccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHccccccccccccEEccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccEEEEccccccccccccccccccccEEEEEccccccccccccccccccccccccccccEEEccccccEEEccccEEEEEEEEEEEEccccccccccccEEEEEEEcccccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEccccccEEEEcccccccccEEEEccccccccEEEEccccHHHHHHHHHHcccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
msgsksnlgtnisssdLIDAKLEEhqlcgskqcpgcghkleakpdwlglpagvkfdptdQELIDHLEAKVeakdmvkphplidefiptiegedgicythpeklpgvtrdglsrhffhrpskayttgtrkrrKIQTecdlqggetrwhktgktrpvmvngkqkgCKKILVLYTNfgknrkpektnWVMHQYHLgqheeekegeLVVSKIFYqtqprqcnwseksattgegssdpnsrrdsgsgscsskemiphrdhevsGAQVAAAMSSYgaidmqqlksdhfsfvpfrksfdevgigeastareapahgtcedirdhhqrphhhlahdhrQQQQQHQQQHQQQQQQQHHTHHQQIATtafhisrpshpistiispsplhhtsiildedsyhVSRIMLQNESFQQQQQQQQQQQQHhklggrsasGLEELIMGctsssdikeessmtnpqeaewlkyssfwpdpdnqdhhg
Flexible Loop (DISEMBL)
msgsksnlgtnissSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKveakdmvkphpLIDEFIPTIEGEDGICYTHPEKLPGVtrdglsrhffhrpskayttgtrkrrkiqtecdlqggetrwhktgktrpvmvngkqkgckKILVLYTNfgknrkpektNWVMHQYHLGQHEEEKEGELVVSKIFYQtqprqcnwseksattgegssdpnsrrdsgSGSCSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAREAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQQQQQQQQQQQQHHKLGGRSASGLEELIMGCTSSSDIKEESSMTNPQEAEWLkyssfwpdpdnQDHHG
Low Complexity Region (SEG)
MSGSKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNsrrdsgsgscssKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAREAPAHGTCEDIRDhhqrphhhlahdhrqqqqqhqqqhqqqqqqqhhthhqqIATTAFhisrpshpistiispsplhhTSIILDEDSYHVSRIMLQNESFqqqqqqqqqqqqHHKLGGRSASGLEELIMGCTSSSDIKEESSMTNPQEAEWLKYSSFWPDPDNQDHHG
Disordered region (IsUnstruct)
*************************QLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHR****Y************ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH*****GELVVSKIFYQTQ********************************************************GAIDMQQLKSDHFSFVPFRKSFDEVG***************************************************************************TII****LHHTSIILDEDSYHVS*****************************************************************************
Disordered Region (DISOPRED)
********************************CP******E**PDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNF*****PEKTNWVMHQYHLGQHEEEKEGELVVSKIF*************************************************************************SFVPFRKSFD*******************************************************************************************ILDEDSYHVSRIML******************************ELIM***************************************
Disordered Region (DISEMBL)
*********TNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKA***********QTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQ**********************************PHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEA*********GTCEDIRDH**************************************ATTAFHISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQN*********************RSASGLEELIMGCTSS*************EAEWLKYSSFWPDPDNQDHHG
Disordered Region (DISPRO)
**************SDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQ******************************************************************DHFSFVPFRKSFDEVGI*********************************************************QIATTAFHISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQQQQQQQQ**********************C********************L**SS**P*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSGSKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGSCSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAREAPAHGTCEDIRDHHQRPHHHLxxxxxxxxxxxxxxxxxxxxxQHHTHHQQIATTAFHISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQQQQQQQQQQQQHHKLGGRSASGLEELIMGCTSSSDIKEESSMTNPQEAEWLKYSSFWPDPDNQDHHG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	470	2.2.26 [Sep-21-2011]
Q6NQK2	449	NAC domain-containing pro	no	no	0.376	0.394	0.589	3e-57
O81913	359	NAC domain-containing pro	no	no	0.257	0.337	0.342	1e-12
Q39013	289	NAC domain-containing pro	no	no	0.270	0.439	0.344	6e-12
Q5PP28	394	NAC domain-containing pro	no	no	0.270	0.322	0.322	2e-11
A2YMR0	425	NAC transcription factor	N/A	no	0.265	0.294	0.337	4e-11
Q93VY3	297	NAC domain-containing pro	no	no	0.319	0.505	0.301	5e-11
Q52QH4	318	NAC domain-containing pro	no	no	0.319	0.471	0.298	6e-11
Q8H115	312	NAC domain-containing pro	no	no	0.310	0.467	0.304	9e-11
Q9C598	283	Protein ATAF2 OS=Arabidop	no	no	0.268	0.445	0.331	9e-11
Q7EZT1	276	NAC domain-containing pro	no	no	0.268	0.456	0.337	1e-10

>sp|Q6NQK2|NAC8_ARATH NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1

 Score =  223 bits (567), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 112/190 (58%), Positives = 134/190 (70%), Gaps = 13/190 (6%)

Query: 30  SKQCPGCGHKLE---AKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFI 86
           S+ CP C H ++      DW GLP GVKFDP+D E+I HL AK      +  HP IDEFI
Sbjct: 36  SRHCPKCQHVIDNSDVVDDWPGLPRGVKFDPSDPEIIWHLLAK-SGLSGLSSHPFIDEFI 94

Query: 87  PTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRW 146
           PT+  +DGICYTHP+ LPGV  DG   HFFH+  KAY+TGTRKRRKI    D   G+ RW
Sbjct: 95  PTVNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIH---DDDFGDVRW 151

Query: 147 HKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVS 206
           HKTG+T+PV+++G Q+GCKKI+VLY       K  KTNWVMHQYHLG  E+EKEG+ VVS
Sbjct: 152 HKTGRTKPVVLDGVQRGCKKIMVLYGG-----KAVKTNWVMHQYHLGIEEDEKEGDYVVS 206

Query: 207 KIFYQTQPRQ 216
           KIFYQ QP+Q
Sbjct: 207 KIFYQ-QPQQ 215

Arabidopsis thaliana (taxid: 3702)

>sp|O81913|NAC4_ARATH NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2

 Score = 75.1 bits (183), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 28/149 (18%)

Query: 50  PAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT-- 107
           P G +F P D+E++DH    +  K++      +DE I T++    IC   P  LP  +  
Sbjct: 4   PVGFRFRPNDEEIVDHY---LRPKNLDSDTSHVDEVISTVD----ICSFEPWDLPSKSMI 56

Query: 108 --RDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMV---NGKQK 162
             RDG+  +FF      Y  G ++RR+  +          W KTGKT  VM    N ++ 
Sbjct: 57  KSRDGV-WYFFSVKEMKYNRGDQQRRRTNSGF--------WKKTGKTMTVMRKRGNREKI 107

Query: 163 GCKKILVLYTNFGKNRKPEKTNWVMHQYH 191
           G K++LV      KNR   KT+WVMH+YH
Sbjct: 108 GEKRVLVF-----KNRDGSKTDWVMHEYH 131

Arabidopsis thaliana (taxid: 3702)

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score = 72.4 bits (176), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 67/148 (45%), Gaps = 21/148 (14%)

Query: 47  LGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGV 106
           L LP G +F PTD+EL+ H   +  A   +         +P I   D   Y  P +LPG+
Sbjct: 5   LQLPPGFRFHPTDEELVMHYLCRKCASQSIA--------VPIIAEIDLYKY-DPWELPGL 55

Query: 107 TRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
              G    +F  P  + Y  G+R  R          G   W  TG  +P+ +  K  G K
Sbjct: 56  ALYGEKEWYFFSPRDRKYPNGSRPNR--------SAGSGYWKATGADKPIGLP-KPVGIK 106

Query: 166 KILVLYTNFGKNRKPEKTNWVMHQYHLG 193
           K LV Y   GK  K EKTNW+MH+Y L 
Sbjct: 107 KALVFYA--GKAPKGEKTNWIMHEYRLA 132

Arabidopsis thaliana (taxid: 3702)

>sp|Q5PP28|NAC3_ARATH NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 25/152 (16%)

Query: 50  PAGVKFDPTDQELI-DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
           P G++F PTD+E++ D+L  K   +D       +D FI T+     +C   P +LP  +R
Sbjct: 4   PVGLRFCPTDEEIVVDYLWPKNSDRDTSH----VDRFINTVP----VCRLDPWELPCQSR 55

Query: 109 DGL---SRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
             L   +  FF      Y  G ++ RK ++          W  TG+ +P+M N +Q G K
Sbjct: 56  IKLKDVAWCFFRPKENKYGRGDQQMRKTKSGF--------WKSTGRPKPIMRNRQQIGEK 107

Query: 166 KILVLYTNFGKNRKPEKTNWVMHQYHLGQHEE 197
           KIL+ YT+     K  K++WV+H+YH   H +
Sbjct: 108 KILMFYTS-----KESKSDWVIHEYHGFSHNQ 134

Arabidopsis thaliana (taxid: 3702)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score = 70.1 bits (170), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 65/148 (43%), Gaps = 23/148 (15%)

Query: 49  LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
           LP G +F PTD+EL+ H   K   K    P P+      TI  E  +    P +LP    
Sbjct: 29  LPPGFRFHPTDEELVVHYLKK---KAASVPLPV------TIIAEVDLYKFDPWELPEKAN 79

Query: 109 DGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK---GC 164
            G    +F  P  + Y  G R  R   +          W  TG  +P+M +G  +   G 
Sbjct: 80  FGEQEWYFFSPRDRKYPNGARPNRAATS--------GYWKATGTDKPIMASGSTREKVGV 131

Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL 192
           KK LV Y   GK  K  KTNW+MH+Y L
Sbjct: 132 KKALVFYR--GKPPKGVKTNWIMHEYRL 157

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q93VY3|NAC72_ARATH NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 26/176 (14%)

Query: 47  LGLPAGVKFDPTDQEL-IDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPG 105
           L LP G +F PTD+EL + +L  KV              F   + G+  +    P  LP 
Sbjct: 12  LSLPPGFRFYPTDEELLVQYLCRKVAGY----------HFSLQVIGDIDLYKFDPWDLPS 61

Query: 106 VTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
               G    +F  P  + Y  G+R  R          G   W  TG  + +  +G++ G 
Sbjct: 62  KALFGEKEWYFFSPRDRKYPNGSRPNR--------VAGSGYWKATGTDKIITADGRRVGI 113

Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEE----EKEGELVVSKIFYQTQPRQ 216
           KK LV Y   GK  K  KTNW+MH+Y L +H       K  + V+ +I+ +T   Q
Sbjct: 114 KKALVFYA--GKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGSQ 167

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score = 69.3 bits (168), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 81/184 (44%), Gaps = 34/184 (18%)

Query: 47  LGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGV 106
           L LP G +F PTD+EL+ H   +  A+   +P P     +P I  E  +    P  LP  
Sbjct: 19  LNLPPGFRFHPTDEELVVHYLCRKVAR---QPLP-----VPII-AEVDLYKLDPWDLPEK 69

Query: 107 TRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK--G 163
              G    +F  P  + Y  G+R  R          G   W  TG  +PV   G  +  G
Sbjct: 70  ALFGRKEWYFFTPRDRKYPNGSRPNR--------AAGRGYWKATGADKPVAPKGSARTVG 121

Query: 164 CKKILVLYTNFGKNRKPEKTNWVMHQYHL--------GQHEEEKEGELVVSKIFYQTQPR 215
            KK LV Y+  GK  +  KT+W+MH+Y L        G+   +K  E V+ +++     +
Sbjct: 122 IKKALVFYS--GKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYN----K 175

Query: 216 QCNW 219
           + NW
Sbjct: 176 KNNW 179

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8H115|NA102_ARATH NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=1 SV=1

 Score = 68.9 bits (167), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 28/174 (16%)

Query: 24  EHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLID 83
           ++++  +++  G   K++A+   L LPAG +F PTD+EL+     +  A + +       
Sbjct: 28  QNRILSTRKQQGTFPKMKAE---LNLPAGFRFHPTDEELVKFYLCRRCASEPIN------ 78

Query: 84  EFIPTIEGEDGICYTHPEKLPGVTRDGLSR-HFFHRPSKAYTTGTRKRRKIQTECDLQGG 142
             +P I  E  +   +P +LP +   G    +FF    + Y  G+R  R          G
Sbjct: 79  --VPVI-AEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNR--------AAG 127

Query: 143 ETRWHKTGKTRPVMVNGKQK--GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQ 194
              W  TG  +P+   GK K  G KK LV Y   GK  K  KTNW+MH+Y L  
Sbjct: 128 TGYWKATGADKPI---GKPKTLGIKKALVFYA--GKAPKGIKTNWIMHEYRLAN 176

May be involved in regulation of seed germination under flooding.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C598|NAC81_ARATH Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1

 Score = 68.6 bits (166), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 69/151 (45%), Gaps = 25/151 (16%)

Query: 47  LGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGV 106
           L LPAG +F PTD+EL+     +  A + +   P+I         E  +   +P +LP +
Sbjct: 5   LNLPAGFRFHPTDEELVKFYLCRKCASEQIS-APVI--------AEIDLYKFNPWELPEM 55

Query: 107 TRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK--G 163
           +  G    +F  P  + Y  G+R  R          G   W  TG  +P+   GK K  G
Sbjct: 56  SLYGEKEWYFFSPRDRKYPNGSRPNR--------AAGTGYWKATGADKPI---GKPKTLG 104

Query: 164 CKKILVLYTNFGKNRKPEKTNWVMHQYHLGQ 194
            KK LV Y   GK  K  KTNW+MH+Y L  
Sbjct: 105 IKKALVFYA--GKAPKGIKTNWIMHEYRLAN 133

Arabidopsis thaliana (taxid: 3702)

>sp|Q7EZT1|NAC67_ORYSJ NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1

 Score = 68.6 bits (166), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 63/148 (42%), Gaps = 22/148 (14%)

Query: 47  LGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTH-PEKLPG 105
           L LP G +F PTD+EL+ H      A     P P+I E            Y H P  LP 
Sbjct: 15  LNLPPGFRFHPTDEELVAHYLCP-RAAGRAAPVPIIAELD---------LYRHDPWDLPH 64

Query: 106 VTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
               G    +F  P  + Y  G+R  R              W  TG  +PV+ NG+  G 
Sbjct: 65  RALFGRREWYFFTPRDRKYPNGSRPNR--------AAASGYWKATGADKPVLHNGRTAGI 116

Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL 192
           KK LV Y   GK  +  KT W+MH+Y L
Sbjct: 117 KKALVFYH--GKPPRGVKTEWIMHEYRL 142

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	470
147780310	454	hypothetical protein VITISV_033770 [Viti	0.961	0.995	0.835	0.0
225445043	450	PREDICTED: uncharacterized protein LOC10	0.953	0.995	0.829	0.0
224088037	455	NAC domain protein, IPR003441 [Populus t	0.961	0.993	0.826	0.0
224122608	452	NAC domain protein, IPR003441 [Populus t	0.942	0.980	0.800	0.0
356497569	451	PREDICTED: uncharacterized protein LOC10	0.912	0.951	0.797	0.0
356523111	467	PREDICTED: uncharacterized protein LOC10	0.904	0.910	0.745	0.0
356527744	450	PREDICTED: uncharacterized protein LOC10	0.908	0.948	0.761	0.0
255546265	460	conserved hypothetical protein [Ricinus	0.927	0.947	0.811	0.0
356511393	445	PREDICTED: uncharacterized protein LOC10	0.919	0.970	0.759	0.0
357520797	485	NAC domain protein [Medicago truncatula]	0.957	0.927	0.728	1e-167

>gi|147780310|emb|CAN61437.1| hypothetical protein VITISV_033770 [Vitis vinifera] gi|297738730|emb|CBI27975.3| unnamed protein product [Vitis vinifera]

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/468 (83%), Positives = 415/468 (88%), Gaps = 16/468 (3%)

Query: 4   SKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELI 63
           +K++LG+ ISSSDLIDAKLEEHQ+CGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELI
Sbjct: 2   NKTHLGS-ISSSDLIDAKLEEHQMCGSKQCPGCGHKLETKPDWLGLPAGVKFDPTDQELI 60

Query: 64  DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 123
           +HLEAKVEAKDM K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY
Sbjct: 61  EHLEAKVEAKDM-KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 119

Query: 124 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 183
           TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT
Sbjct: 120 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 179

Query: 184 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGS 243
           NWVMHQYHLGQ EEEKEGELVVSKIFYQTQPRQCNWS++SATTGEG+S+PNSRRDSGSGS
Sbjct: 180 NWVMHQYHLGQLEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGNSEPNSRRDSGSGS 239

Query: 244 CSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAR 303
           CSSKE+IP RD E+SGA V AA+SSY  +D+QQLKSDHFSF PFRKSFDEVGIGEASTAR
Sbjct: 240 CSSKEVIPQRD-ELSGAGVGAAISSYSPLDIQQLKSDHFSFAPFRKSFDEVGIGEASTAR 298

Query: 304 EAPAHGTCEDIRDH-HQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHI 362
           EAPA GTCE+   H HQRP HH+ HD + Q Q H   H             Q+AT AFHI
Sbjct: 299 EAPASGTCEEHEIHDHQRP-HHVTHDPQPQPQHHHHHHHHPH--------HQLATAAFHI 349

Query: 363 SRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQQQQQQQQQQQQHHKLGGRS 422
           +RPSH IS IISP PLHHTSIILDEDSYHVSRIMLQNE+FQQ  QQ QQQ    KLGGRS
Sbjct: 350 TRPSHSISAIISPPPLHHTSIILDEDSYHVSRIMLQNENFQQHHQQPQQQHH--KLGGRS 407

Query: 423 ASGLEELIMGCTSSSDIKEESSMTNPQEAEWLKYSSFWPDPDNQDHHG 470
           ASGLEELIMGCT S+DIKEESS+TNPQEA+WLKYS FWPDPDN DHHG
Sbjct: 408 ASGLEELIMGCT-STDIKEESSITNPQEADWLKYSPFWPDPDNPDHHG 454

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445043|ref|XP_002283321.1| PREDICTED: uncharacterized protein LOC100261063 [Vitis vinifera]

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/468 (82%), Positives = 412/468 (88%), Gaps = 20/468 (4%)

Query: 4   SKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELI 63
           +K++LG+ ISSSDLIDAKLEEHQ+CGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELI
Sbjct: 2   NKTHLGS-ISSSDLIDAKLEEHQMCGSKQCPGCGHKLETKPDWLGLPAGVKFDPTDQELI 60

Query: 64  DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 123
           +HLEAKVEAKDM K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY
Sbjct: 61  EHLEAKVEAKDM-KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 119

Query: 124 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 183
           TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT
Sbjct: 120 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 179

Query: 184 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGS 243
           NWVMHQYHLGQ EEEKEGELVVSKIFYQTQPRQCNWS++SATTGEG+S+PNSRRDSGSGS
Sbjct: 180 NWVMHQYHLGQLEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGNSEPNSRRDSGSGS 239

Query: 244 CSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAR 303
           CSSKE+IP RD E+SGA V AA+SSY  +D+QQLKSDHFSF PFRKSFD     EASTAR
Sbjct: 240 CSSKEVIPQRD-ELSGAGVGAAISSYSPLDIQQLKSDHFSFAPFRKSFD-----EASTAR 293

Query: 304 EAPAHGTCEDIRDH-HQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHI 362
           EAPA GTCE+   H HQRP HH+ HD + Q Q H   H             Q+AT AFHI
Sbjct: 294 EAPASGTCEEHEIHDHQRP-HHVTHDPQPQPQHHHHHHHHPH--------HQLATAAFHI 344

Query: 363 SRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQQQQQQQQQQQQHHKLGGRS 422
           +RPSH IS IISP PLHHTSIILDEDSYHVSRIMLQNE+FQQQ  QQ QQQ  HKLGGRS
Sbjct: 345 TRPSHSISAIISPPPLHHTSIILDEDSYHVSRIMLQNENFQQQHHQQPQQQH-HKLGGRS 403

Query: 423 ASGLEELIMGCTSSSDIKEESSMTNPQEAEWLKYSSFWPDPDNQDHHG 470
           ASGLEELIMGCT S+DIKEESS+TNPQEA+WLKYS FWPDPDN DHHG
Sbjct: 404 ASGLEELIMGCT-STDIKEESSITNPQEADWLKYSPFWPDPDNPDHHG 450

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088037|ref|XP_002308301.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222854277|gb|EEE91824.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/468 (82%), Positives = 414/468 (88%), Gaps = 16/468 (3%)

Query: 4   SKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELI 63
           +KSN+ + ISSS+LIDAKLEEHQLCGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELI
Sbjct: 3   TKSNMAS-ISSSNLIDAKLEEHQLCGSKQCPGCGHKLEGKPDWLGLPAGVKFDPTDQELI 61

Query: 64  DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 123
           +HLEAKVEAKDM + HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY
Sbjct: 62  EHLEAKVEAKDM-RSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 120

Query: 124 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 183
           TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNR+PEKT
Sbjct: 121 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRRPEKT 180

Query: 184 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGS 243
           NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCN++++SAT GEGS DP+SRRDSGSGS
Sbjct: 181 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNYTDRSATLGEGSGDPSSRRDSGSGS 240

Query: 244 CSSKEMIPHRDHEVSG-AQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTA 302
           CSSKE+IP RD E+SG   VAA++SS  A+D+ QLKSDHF F PFRKSFDEVGI EAS A
Sbjct: 241 CSSKEIIPQRD-EISGTGPVAASISSCTALDIHQLKSDHFGFTPFRKSFDEVGIREASVA 299

Query: 303 REAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHI 362
           REA A GTC++I++ HQRP HH+AHD  QQQQ     H Q           QIAT AFHI
Sbjct: 300 REASASGTCDEIQEQHQRP-HHVAHDPHQQQQLQHHHHHQTVH-------HQIATAAFHI 351

Query: 363 SRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQQQQQQQQQQQQHHKLGGRS 422
           SRPSHPISTIISPSPLHHTSIILDED YHVSR+MLQNE  QQQ QQQQQ     KLGGRS
Sbjct: 352 SRPSHPISTIISPSPLHHTSIILDEDPYHVSRLMLQNEIQQQQHQQQQQHH---KLGGRS 408

Query: 423 ASGLEELIMGCTSSSDIKEESSMTNPQEAEWLKYSSFWPDPDNQDHHG 470
           ASGLEELIMGCT S+D+KEES +TNPQEAEWLKYSSFWPDPDNQDHHG
Sbjct: 409 ASGLEELIMGCT-STDVKEESPITNPQEAEWLKYSSFWPDPDNQDHHG 455

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122608|ref|XP_002330524.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222872458|gb|EEF09589.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/461 (80%), Positives = 399/461 (86%), Gaps = 18/461 (3%)

Query: 11  NISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKV 70
           +ISSSDLIDAKLEEHQLCGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELI+HLEAKV
Sbjct: 9   SISSSDLIDAKLEEHQLCGSKQCPGCGHKLEGKPDWLGLPAGVKFDPTDQELIEHLEAKV 68

Query: 71  EAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKR 130
           EAKDM + HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKR
Sbjct: 69  EAKDM-RSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKR 127

Query: 131 RKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQY 190
           RKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNR+PEKTNWVMHQY
Sbjct: 128 RKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRRPEKTNWVMHQY 187

Query: 191 HLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGSCSSKEMI 250
           HLGQHEEEKEGELVVSKIFYQTQPRQCN+++++A+ GEGSS+PNSRRD GSGSCSSKE+ 
Sbjct: 188 HLGQHEEEKEGELVVSKIFYQTQPRQCNYTDRAASIGEGSSEPNSRRDGGSGSCSSKEIS 247

Query: 251 PHRDHEVSG-AQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAREAPAHG 309
            H D E+SG   VA++++SY A+D+QQLKSDHF F PFRK FDEVGIGEAS  REA A  
Sbjct: 248 LHGD-EISGTGTVASSLTSYTAMDIQQLKSDHFCFTPFRKGFDEVGIGEASVTREASASA 306

Query: 310 TCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHISRPSHPI 369
           TC++IR+HHQ P HH+AHD  QQQ Q QQ H    Q      H Q ATTAFH+S PSHP 
Sbjct: 307 TCDEIREHHQMP-HHVAHDPHQQQTQQQQHHYHHHQTA----HHQFATTAFHMSTPSHPF 361

Query: 370 STIISPSPLHHTSIILDEDSYHVSRIMLQNESFQQQQQQQQQQQQHHKLGGRSASGLEEL 429
           STIISP  L+H SIILDED YHVSRIMLQNE  QQQQ          K+GGRSASGLEEL
Sbjct: 362 STIISPPSLNH-SIILDEDPYHVSRIMLQNEIQQQQQHH--------KMGGRSASGLEEL 412

Query: 430 IMGCTSSSDIKEESSMTNPQEAEWLKYSSFWPDPDNQDHHG 470
           IMGCT S+D+KE+SS+ NPQEAEWLKYSSFW DP NQDHHG
Sbjct: 413 IMGCT-SNDVKEDSSIANPQEAEWLKYSSFWQDPGNQDHHG 452

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497569|ref|XP_003517632.1| PREDICTED: uncharacterized protein LOC100795246 [Glycine max]

 Score =  704 bits (1817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/464 (79%), Positives = 397/464 (85%), Gaps = 35/464 (7%)

Query: 16  DLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDM 75
           DLIDAKLEEHQLCGSKQCPGCGHK E KPDWLGLPAGVKFDPTDQELI+HLEAKVEAK+M
Sbjct: 14  DLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELIEHLEAKVEAKNM 73

Query: 76  VKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQT 135
            K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQ 
Sbjct: 74  -KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQN 132

Query: 136 ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH 195
           ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH
Sbjct: 133 ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH 192

Query: 196 EEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNS--RRDSGSGSCSSKEMIPHR 253
           EEEKEGELVVSKIFYQTQPRQCNWS++SATTGEGS +PN+  RRDSGSGSCSSKE++ HR
Sbjct: 193 EEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEPNNSGRRDSGSGSCSSKEIVTHR 252

Query: 254 DHEVSGAQVAAAMSSYG---AIDMQQLKSDHFSFVPFRKSFDE---VGIGEASTAREAP- 306
           D E+S       M+S+     +D+QQLK DHFSF+PFRKSFDE   VGIGEASTARE   
Sbjct: 253 D-EMSAVVGVPPMTSFTHHHPLDIQQLKPDHFSFIPFRKSFDERMQVGIGEASTAREVMQ 311

Query: 307 AHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHISRPS 366
           A G+CE++   H+R   HLA           Q      Q Q H HH QI+ +AFHISRPS
Sbjct: 312 ASGSCEEV---HER---HLA-----------QVTPHHHQLQQHAHHHQISNSAFHISRPS 354

Query: 367 HPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQQQQQQQQQQQQHHKLGGRSASGL 426
           HPISTIISP PLHHTSIILD++SYHVSRIMLQNE+F      QQQQQQHHKLGGRSASGL
Sbjct: 355 HPISTIISPPPLHHTSIILDDNSYHVSRIMLQNENF------QQQQQQHHKLGGRSASGL 408

Query: 427 EELIMGCTSSSDIKEESSMTNPQEAEWLKYSSFWPDPDNQDHHG 470
           EELIMGCT S++IKEESS+TN QEAEWLKYSS+WPDPDNQDHHG
Sbjct: 409 EELIMGCT-STEIKEESSITNAQEAEWLKYSSYWPDPDNQDHHG 451

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523111|ref|XP_003530185.1| PREDICTED: uncharacterized protein LOC100791884 [Glycine max]

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/483 (74%), Positives = 390/483 (80%), Gaps = 58/483 (12%)

Query: 16  DLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDM 75
           DLIDAKLEEHQLCGSKQCPGCGHK E KPDWLGLPAGVKFDPTDQEL +HLEAKVEAK+M
Sbjct: 15  DLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELTEHLEAKVEAKNM 74

Query: 76  VKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQT 135
            K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLS+HFFHRPSKAYTTGTRKRRKIQ 
Sbjct: 75  -KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQN 133

Query: 136 ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH 195
           ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH
Sbjct: 134 ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH 193

Query: 196 EEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNS----RRDSGSGSCSSKEMIP 251
           EEEKEGELVVSKIFYQTQPRQCNWS++SATTGEGS +PN+    RRDSGSGSCSSKE++ 
Sbjct: 194 EEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEPNNNSTGRRDSGSGSCSSKEIVT 253

Query: 252 HRDH--EVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDE---------------- 293
           HRD    V G       +++  +D+QQLK DHFSF+PFRK+FDE                
Sbjct: 254 HRDEMSAVVGVPPMTGFTTHLPLDIQQLKPDHFSFIPFRKTFDEIEFAFAPKSEIRTWKW 313

Query: 294 ----VGIGEASTAREAP-AHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQH 348
               VGIGEASTARE   A G+CE++   H+R                + QH    QQQ 
Sbjct: 314 LRMQVGIGEASTAREVVQASGSCEEV---HER---------------QRAQHVAHHQQQQ 355

Query: 349 HTHHQQIATTAFHISRPSHPISTIISPSPLHHTSIILDE-DSYHVSRIMLQNESFQQQQQ 407
           H HH QI+ +AFHISRPSHPISTIISP PLHHTSIILD+ +SYHVSRIMLQNE+F     
Sbjct: 356 HAHHHQISNSAFHISRPSHPISTIISPPPLHHTSIILDDNNSYHVSRIMLQNENF----- 410

Query: 408 QQQQQQQHHKLGGRSASGLEELIMGCTSSSDIKEESSMTNPQEAEWLKYSSFWPDPDNQD 467
               QQQHHKLGGRSASGLEELIMGCT S++IKEESS+TNPQEAEWLKY S+WPDPDN D
Sbjct: 411 ----QQQHHKLGGRSASGLEELIMGCT-STEIKEESSITNPQEAEWLKY-SYWPDPDNPD 464

Query: 468 HHG 470
           HHG
Sbjct: 465 HHG 467

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527744|ref|XP_003532468.1| PREDICTED: uncharacterized protein LOC100799291 [Glycine max]

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/469 (76%), Positives = 389/469 (82%), Gaps = 42/469 (8%)

Query: 12  ISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVE 71
           + SSDLIDAKLEEHQLCGSKQCPGCGHK E KPDWLGLPAGVKFDPTDQELI+HLEAKVE
Sbjct: 10  VRSSDLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELIEHLEAKVE 69

Query: 72  AKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRR 131
           AK+M K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRR
Sbjct: 70  AKNM-KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRR 128

Query: 132 KIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYH 191
           KIQ ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYH
Sbjct: 129 KIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYH 188

Query: 192 LGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNS--------RRDSGSGS 243
           LGQ+EEE+EGELVVSKIFYQTQPRQCNWS++SATTGEGS +  S        RRDSGSG+
Sbjct: 189 LGQYEEEREGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEQQSNNNNNNNGRRDSGSGT 248

Query: 244 C-SSKEM-IPHRDHEVSGAQVAAAMSSYG-AIDMQQLKSDHFSFVPFRKSFDEVGIGEAS 300
           C SSKE+ + HRD E+S   V   ++++  A+D+QQLKSDHF F+PFRK FDEVGIGEA 
Sbjct: 249 CSSSKEINVTHRD-EMSAVVVVPPITTFNTALDIQQLKSDHFGFIPFRKGFDEVGIGEAC 307

Query: 301 TAREAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAF 360
           TARE  A G+C+++   H+R               H   H QQQQQQ+    QQIATTA 
Sbjct: 308 TAREVQASGSCDEV---HER---------------HAVHHHQQQQQQNQHAQQQIATTAS 349

Query: 361 HISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQQQQQQQQQQQQHHKLGG 420
           HISRPS PISTIISP PLHH SIILD++SYHVSRIMLQNE+F        Q QQH+KLGG
Sbjct: 350 HISRPSLPISTIISPPPLHHASIILDDNSYHVSRIMLQNENF--------QHQQHYKLGG 401

Query: 421 RSASGLEELIMGCTSSSDIKEESSMTNPQEAEWLKYSSFWPDPDN-QDH 468
           RSASGLEELIMGCT S+DIK ESS+ NPQ AEWLKYSS+WPDP N QDH
Sbjct: 402 RSASGLEELIMGCT-STDIKAESSIANPQ-AEWLKYSSYWPDPANMQDH 448

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546265|ref|XP_002514192.1| conserved hypothetical protein [Ricinus communis] gi|223546648|gb|EEF48146.1| conserved hypothetical protein [Ricinus communis]

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/446 (81%), Positives = 383/446 (85%), Gaps = 10/446 (2%)

Query: 4   SKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELI 63
           +KSNLG+ ISSSDLIDAKLEEHQLCGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELI
Sbjct: 2   NKSNLGS-ISSSDLIDAKLEEHQLCGSKQCPGCGHKLEGKPDWLGLPAGVKFDPTDQELI 60

Query: 64  DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 123
           +HLEAKV AKDM K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY
Sbjct: 61  EHLEAKVVAKDM-KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 119

Query: 124 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 183
           TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT
Sbjct: 120 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 179

Query: 184 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGS 243
           NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNW+++SATTGEGSSDPNSRRDSGSGS
Sbjct: 180 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWTDRSATTGEGSSDPNSRRDSGSGS 239

Query: 244 CSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAR 303
           CSSKE+ P RD E++GA VA A+S+Y A+D+Q LKSDHF F PFRK+FDEVGI EASTAR
Sbjct: 240 CSSKEINPQRD-EITGAGVAVALSTYTAMDIQHLKSDHFGFPPFRKTFDEVGIAEASTAR 298

Query: 304 EAPAHGTCEDIRD-HHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHI 362
           E    GTC++IR+ HH+  H    H        HQQQ Q Q Q QHH  H QIATTAFHI
Sbjct: 299 ETQVSGTCDEIREHHHRPHHLAHDHHPPPPHHHHQQQQQPQPQPQHHHVHHQIATTAFHI 358

Query: 363 SRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQQQQQQQQQQQQHHKL---- 418
           SRPSHPISTIISP PLHHTSIILDED YHVSR+MLQNE  QQQ       QQ  +     
Sbjct: 359 SRPSHPISTIISPPPLHHTSIILDEDPYHVSRLMLQNEIQQQQHHHHHHHQQQQQHHHKM 418

Query: 419 -GGRSASGLEELIMGCTSSSDIKEES 443
            GGRSASGLEELIMGCT S+D KE S
Sbjct: 419 GGGRSASGLEELIMGCT-STDTKEVS 443

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511393|ref|XP_003524411.1| PREDICTED: uncharacterized protein LOC100794811 [Glycine max]

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/470 (75%), Positives = 386/470 (82%), Gaps = 38/470 (8%)

Query: 6   SNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDH 65
           SNL   + SSDLIDAKLEEHQLCGSKQCPGCGHK E KPDWLGLPAGVKFDPTDQELI+H
Sbjct: 5   SNLSC-VRSSDLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELIEH 63

Query: 66  LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTT 125
           LEAK+EAK+M K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTT
Sbjct: 64  LEAKIEAKNM-KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTT 122

Query: 126 GTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW 185
           GTRKRRKIQ ECDLQGGETRWHKTGKTRPVMVNGKQKG KKILVLYTNFGKNRKPEKTNW
Sbjct: 123 GTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGYKKILVLYTNFGKNRKPEKTNW 182

Query: 186 VMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGS-----SDPNSRRDSG 240
           VMHQYH+GQHEEEKEGELVVSKIFYQTQPRQCNWS++SATTGEGS     ++ N RRDSG
Sbjct: 183 VMHQYHMGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEQQPNNNNGRRDSG 242

Query: 241 SGSCSS-KEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEA 299
           SGSCSS KE++ HRD   +   V    +   ++D+QQLKS+HF F+PFRK FDEVGIGEA
Sbjct: 243 SGSCSSSKEIVTHRDEMSAVVGVPPITTFNTSLDIQQLKSNHFGFIPFRKGFDEVGIGEA 302

Query: 300 STAREAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTA 359
           STARE  A G+C ++ + H                     H  QQQQQ+   HQQIATTA
Sbjct: 303 STAREVQASGSCNEVHERHV-------------------AHHHQQQQQNQHAHQQIATTA 343

Query: 360 FHISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQQQQQQQQQQQQHHKLG 419
           FHIS PS PISTIISP P HH SIILD++SYHVSRIMLQNE+FQQQ         HHKLG
Sbjct: 344 FHISSPSLPISTIISPPPFHHASIILDDNSYHVSRIMLQNENFQQQ---------HHKLG 394

Query: 420 GRSASGLEELIMGCTSSSDIKEESSMTNPQEAEWLKYSSFWPDPDN-QDH 468
           GRSASGLEELIMGCTS+ DIK ESS+TNPQEAEWLKYSS+WPDP N QDH
Sbjct: 395 GRSASGLEELIMGCTST-DIKAESSITNPQEAEWLKYSSYWPDPGNMQDH 443

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520797|ref|XP_003630687.1| NAC domain protein [Medicago truncatula] gi|355524709|gb|AET05163.1| NAC domain protein [Medicago truncatula]

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 351/482 (72%), Positives = 387/482 (80%), Gaps = 32/482 (6%)

Query: 6   SNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLE-AKPDWLGLPAGVKFDPTDQELID 64
           +N  +N+SSS+LID+KLEEHQLCGSK CP CGHK +  KPDWLGLPAGVKFDPTDQELI+
Sbjct: 3   NNKMSNVSSSNLIDSKLEEHQLCGSKHCPRCGHKFDQGKPDWLGLPAGVKFDPTDQELIE 62

Query: 65  HLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYT 124
           HLEAKVE+K+M K HPLIDEFI TIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYT
Sbjct: 63  HLEAKVESKNMQKSHPLIDEFILTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYT 122

Query: 125 TGTRKRRKIQT-ECDLQ---GGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKP 180
           TGTRKRRKIQT ECDLQ   GGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKP
Sbjct: 123 TGTRKRRKIQTEECDLQGSTGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKP 182

Query: 181 EKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKS------------ATTGE 228
           EKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWS+ +             + GE
Sbjct: 183 EKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDNNQRIISATTTTGEGSGGE 242

Query: 229 GSSDPNSRRDSGSGSCSSKEMIP--HRDHEVSGAQVAAAMSSY-GAIDMQQLKSDHFSFV 285
            + + N RRDSGSGS SSKE++   HRD   +   V + ++S+  A+D+Q LKSDHF F+
Sbjct: 243 PNYNINGRRDSGSGSSSSKEIVTQIHRDEMSAVVGVPSPLTSFTNALDIQHLKSDHFGFI 302

Query: 286 PFRKSFDEVGIGEASTAREAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQ 345
           PFRKS+DEVGIGE ST RE  A G   D ++ H+R HH LAH H+QQQQQ   Q QQQQ 
Sbjct: 303 PFRKSYDEVGIGEGSTTREMQASGGSCD-QEVHERQHHVLAHHHQQQQQQQHHQQQQQQH 361

Query: 346 QQHHTHHQQIATTAFHISRPSHPISTIISPSPLHHTS-IILDEDSYHVSRIMLQNESFQQ 404
             H       A  AFHISRPS+PISTIISP PLHHTS IILD++SYHVS IML      Q
Sbjct: 362 DHHVHQQIS-ANAAFHISRPSNPISTIISPPPLHHTSTIILDDNSYHVSTIML------Q 414

Query: 405 QQQQQQQQQQHHKL-GGRSASGLEELIMGCTS-SSDIKEESSMTNPQEAEWLKYSSFWP- 461
           Q +  QQQQQHHKL GGRSASGLEE+IMGCTS SSDIKEESS+ N QEAEWLKYSS+WP 
Sbjct: 415 QNENFQQQQQHHKLGGGRSASGLEEVIMGCTSTSSDIKEESSIRNQQEAEWLKYSSYWPV 474

Query: 462 DP 463
           DP
Sbjct: 475 DP 476

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	470
TAIR|locus:2118264	498	NAC075 "NAC domain containing	0.470	0.443	0.860	1.5e-142
TAIR|locus:2165031	386	NAC099 "NAC domain containing	0.444	0.541	0.772	4.2e-98
TAIR|locus:2121387	305	NAC073 "NAC domain containing	0.417	0.642	0.709	1.1e-76
TAIR|locus:2032580	314	NAC010 "NAC domain containing	0.395	0.592	0.690	2.9e-71
TAIR|locus:2031170	449	SOG1 "SUPPRESSOR OF GAMMA RADI	0.376	0.394	0.589	1.8e-55
TAIR|locus:2145743	350	NAC085 "NAC domain containing	0.465	0.625	0.495	6.5e-51
TAIR|locus:2084148	370	NAC044 "NAC domain containing	0.423	0.537	0.495	3.7e-48
TAIR|locus:2204833	394	NAC003 "NAC domain containing	0.336	0.401	0.304	1.5e-10
TAIR|locus:2204783	359	NAC004 "NAC domain containing	0.257	0.337	0.342	2.5e-10
TAIR|locus:2184742	489	NAC082 "NAC domain containing	0.265	0.255	0.367	1.1e-09

TAIR|locus:2118264 NAC075 "NAC domain containing protein 75" [Arabidopsis thaliana (taxid:3702)]

 Score = 1063 (379.3 bits), Expect = 1.5e-142, Sum P(3) = 1.5e-142
 Identities = 197/229 (86%), Positives = 209/229 (91%)

Query:     4 SKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKP-DWLGLPAGVKFDPTDQEL 62
             +KSN   +++ SD+IDAK+EEHQLCGSK+CP CGHKLE KP DW+GLPAGVKFDPTDQEL
Sbjct:     2 NKSNPAGSVTGSDIIDAKIEEHQLCGSKKCPSCGHKLEGKPQDWVGLPAGVKFDPTDQEL 61

Query:    63 IDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKA 122
             I+HLEAKV AKD  K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKA
Sbjct:    62 IEHLEAKVLAKDF-KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKA 120

Query:   123 YTTGTRKRRKIQTECD--LQG----GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGK 176
             YTTGTRKRRKIQTECD  LQG    GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGK
Sbjct:   121 YTTGTRKRRKIQTECDNNLQGSSSSGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGK 180

Query:   177 NRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSAT 225
             NRKPEKTNWVMHQYHLG HEEEKEGELVVSKIFYQTQPRQCNWS  +++
Sbjct:   181 NRKPEKTNWVMHQYHLGTHEEEKEGELVVSKIFYQTQPRQCNWSSSTSS 229

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2165031 NAC099 "NAC domain containing protein 99" [Arabidopsis thaliana (taxid:3702)]

 Score = 912 (326.1 bits), Expect = 4.2e-98, Sum P(2) = 4.2e-98
 Identities = 173/224 (77%), Positives = 195/224 (87%)

Query:    13 SSSDLIDAKLEEHQ-LCGSKQCPGCGHKLEA--KPDWLGLPAGVKFDPTDQELIDHLEAK 69
             S  +LID+KLEEH  LCGSK CPGCG  ++A  KP+W+GLPAGVKFDPTDQELI+HLEAK
Sbjct:     4 SKCNLIDSKLEEHHHLCGSKHCPGCGRMIQAATKPNWVGLPAGVKFDPTDQELIEHLEAK 63

Query:    70 VEAKDMVKP----HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTT 125
             V+ K+  K     HPLIDEFIPTI+GEDGICYTHP+KLPGVTRDGLS+HFFH+PS+AYTT
Sbjct:    64 VKGKEENKKWSSSHPLIDEFIPTIDGEDGICYTHPQKLPGVTRDGLSKHFFHKPSRAYTT 123

Query:   126 GTRKRRKI-QTECD--LQGG-ETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPE 181
             GTRKRRKI QT+ D  L G  ETRWHKTGKTRPVM+NG+Q+GCKKILVLYTNFGKNR+PE
Sbjct:   124 GTRKRRKIIQTDHDSELTGSSETRWHKTGKTRPVMINGQQRGCKKILVLYTNFGKNRRPE 183

Query:   182 KTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQC----NWSE 221
             KTNWVMHQYHLG +EEE+EGELVVSKIFYQTQPRQC    NWS+
Sbjct:   184 KTNWVMHQYHLGINEEEREGELVVSKIFYQTQPRQCVSNTNWSD 227

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2121387 NAC073 "NAC domain containing protein 73" [Arabidopsis thaliana (taxid:3702)]

 Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
 Identities = 144/203 (70%), Positives = 162/203 (79%)

Query:    31 KQCPGCGHKLEAKP-----DWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEF 85
             K CP CGH  +        D  GLPAGVKFDPTDQE+++HLE KV   D  K HPLIDEF
Sbjct:    36 KTCPSCGHNFKFHEQAGIHDLPGLPAGVKFDPTDQEVLEHLEGKVR-DDAKKLHPLIDEF 94

Query:    86 IPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETR 145
             I TI+GE+GICYTHPEKLPGV +DG  RHFFHRPSKAYTTGTRKRRK+ T+ D+ GGETR
Sbjct:    95 IRTIDGENGICYTHPEKLPGVNKDGTVRHFFHRPSKAYTTGTRKRRKVHTDSDV-GGETR 153

Query:   146 WHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVV 205
             WHKTGKTRPV+  G+ +G KKILVLYTN+GK +KPEKTNWVMHQYHLG  EEEKEGELVV
Sbjct:   154 WHKTGKTRPVLAGGRVRGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGTSEEEKEGELVV 213

Query:   206 SKIFYQTQPRQCNWSEKSATTGE 228
             SK+FYQTQPRQC  S  +A T +
Sbjct:   214 SKVFYQTQPRQCGGSVAAAATAK 236

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000652 "regulation of secondary cell wall biogenesis" evidence=IMP

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2032580 NAC010 "NAC domain containing protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
 Identities = 136/197 (69%), Positives = 158/197 (80%)

Query:    33 CPGCGHKLEA-KPDWLG-------LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDE 84
             CP CGHKL   + D +G       LPAGVKFDP+D+E++ HLEAKV + D  K HPLIDE
Sbjct:    53 CPSCGHKLHHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHLEAKVSS-DKRKLHPLIDE 111

Query:    85 FIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGET 144
             FIPT+EGE+GICYTHPEKLPGV++DG  RHFFHRPSKAYTTGTRKRRK+ T  D +G ET
Sbjct:   112 FIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVST--DEEGHET 169

Query:   145 RWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELV 204
             RWHKTGKTRPV+    + G KKILVLYTN+G+ +KPEKTNWVMHQYHLG  E+EK+GE V
Sbjct:   170 RWHKTGKTRPVLSQSGETGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSSEDEKDGEPV 229

Query:   205 VSKIFYQTQPRQCNWSE 221
             +SK+FYQTQPRQC   E
Sbjct:   230 LSKVFYQTQPRQCGSME 246

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000652 "regulation of secondary cell wall biogenesis" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2031170 SOG1 "SUPPRESSOR OF GAMMA RADIATION 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 112/190 (58%), Positives = 135/190 (71%)

Query:    30 SKQCPGCGHKLEAKP---DWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFI 86
             S+ CP C H ++      DW GLP GVKFDP+D E+I HL AK     +   HP IDEFI
Sbjct:    36 SRHCPKCQHVIDNSDVVDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGL-SSHPFIDEFI 94

Query:    87 PTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRW 146
             PT+  +DGICYTHP+ LPGV  DG   HFFH+  KAY+TGTRKRRKI  + D   G+ RW
Sbjct:    95 PTVNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIHDD-DF--GDVRW 151

Query:   147 HKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVS 206
             HKTG+T+PV+++G Q+GCKKI+VLY       K  KTNWVMHQYHLG  E+EKEG+ VVS
Sbjct:   152 HKTGRTKPVVLDGVQRGCKKIMVLYGG-----KAVKTNWVMHQYHLGIEEDEKEGDYVVS 206

Query:   207 KIFYQTQPRQ 216
             KIFYQ QP+Q
Sbjct:   207 KIFYQ-QPQQ 215

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0000077 "DNA damage checkpoint" evidence=IMP

GO:0040020 "regulation of meiosis" evidence=IMP

GO:0010332 "response to gamma radiation" evidence=IMP

TAIR|locus:2145743 NAC085 "NAC domain containing protein 85" [Arabidopsis thaliana (taxid:3702)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 116/234 (49%), Positives = 153/234 (65%)

Query:     8 LGTNISSSDLIDAKLEEHQLCGSK-QCPGCGHKLEAK---PDWLGLPAGVKFDPTDQELI 63
             +  N+ ++ L  A L+    CG+   C  C ++++       W GLP GVKF+PTD+E+I
Sbjct:    15 ISRNVKNASLSSA-LQIKD-CGAYINCFNCSYRIDNSNVLTPWPGLPKGVKFEPTDEEVI 72

Query:    64 DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 123
             +HLEAK    D +KPH LI +FI ++  + GI YTHP+ LPGV++DG S  FF++ + AY
Sbjct:    73 EHLEAKCGI-DGLKPHLLIQDFICSVTQDVGINYTHPQNLPGVSKDGTSVFFFNKTAHAY 131

Query:   124 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 183
               G RKRR+I T   L+    RWHKTG+T+PVM+NG QKGCKKI+VLY +  K  KPEK+
Sbjct:   132 QNGQRKRRRI-TPTSLKDDTVRWHKTGQTKPVMLNGIQKGCKKIMVLYKSARKGFKPEKS 190

Query:   184 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQ----CNWSEKSATTGEGSSDP 233
             NWV+HQYHLG  EE + GE VVSKI YQ QP+Q     + SE S   G G S P
Sbjct:   191 NWVLHQYHLGT-EEGEIGEYVVSKITYQ-QPKQQEKTIDESESSGVRG-GPSTP 241

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2084148 NAC044 "NAC domain containing protein 44" [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 102/206 (49%), Positives = 138/206 (66%)

Query:    26 QLCGSK-QCPGCGHKLEAKP---DWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPL 81
             Q CG+  +CP C ++++       W GLP GVKF+PTD+++I+ LEAK       +PH L
Sbjct:    28 QDCGAHIKCPNCTYRIDNSNVLIPWPGLPKGVKFEPTDEDIIEFLEAKCGIGGS-EPHVL 86

Query:    82 IDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQG 141
             I+EFI  +  + GI YTHP+ LPG  +DG+S  FFH+  +AY TG RKRRKI T   +  
Sbjct:    87 IEEFIRPVTEDVGINYTHPQNLPGANKDGVSVFFFHKTVQAYGTGQRKRRKI-TPTLVND 145

Query:   142 GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEG 201
                RWHKTG+T+PVM++G Q+GCKKI+VLY +  K  KPEK+NWV+HQYHLG  E ++ G
Sbjct:   146 EPVRWHKTGRTKPVMLSGVQRGCKKIMVLYKSARKGTKPEKSNWVLHQYHLGT-EGKEIG 204

Query:   202 ELVVSKIFYQTQPRQCNWSEKSATTG 227
             + VVSKI YQ Q    N  E  +++G
Sbjct:   205 DYVVSKITYQQQKLGENPDEGESSSG 230

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2204833 NAC003 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 56/184 (30%), Positives = 91/184 (49%)

Query:    50 PAGVKFDPTDQELI-DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
             P G++F PTD+E++ D+L  K   +D    H  +D FI T+     +C   P +LP  +R
Sbjct:     4 PVGLRFCPTDEEIVVDYLWPKNSDRDT--SH--VDRFINTVP----VCRLDPWELPCQSR 55

Query:   109 DGLS--RHFFHRPSK-AYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
               L      F RP +  Y  G ++ RK ++          W  TG+ +P+M N +Q G K
Sbjct:    56 IKLKDVAWCFFRPKENKYGRGDQQMRKTKSGF--------WKSTGRPKPIMRNRQQIGEK 107

Query:   166 KILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSAT 225
             KIL+ YT+     K  K++WV+H+YH   H +       + K+ +    R+ + S  S++
Sbjct:   108 KILMFYTS-----KESKSDWVIHEYHGFSHNQMMM-TYTLCKVMFNGGMREKSSSSPSSS 161

Query:   226 TGEG 229
                G
Sbjct:   162 GVSG 165

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2204783 NAC004 "NAC domain containing protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 51/149 (34%), Positives = 74/149 (49%)

Query:    50 PAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT-- 107
             P G +F P D+E++DH    +  K++      +DE I T++    IC   P  LP  +  
Sbjct:     4 PVGFRFRPNDEEIVDHY---LRPKNLDSDTSHVDEVISTVD----ICSFEPWDLPSKSMI 56

Query:   108 --RDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMV---NGKQK 162
               RDG+  +FF      Y  G ++RR+  +          W KTGKT  VM    N ++ 
Sbjct:    57 KSRDGVW-YFFSVKEMKYNRGDQQRRRTNSGF--------WKKTGKTMTVMRKRGNREKI 107

Query:   163 GCKKILVLYTNFGKNRKPEKTNWVMHQYH 191
             G K++LV      KNR   KT+WVMH+YH
Sbjct:   108 GEKRVLVF-----KNRDGSKTDWVMHEYH 131

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2184742 NAC082 "NAC domain containing protein 82" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 54/147 (36%), Positives = 72/147 (48%)

Query:    49 LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT- 107
             L  G +F PTD EL+ +    ++ K + K   L+D        E  I    P  LP ++ 
Sbjct:     6 LAPGFRFHPTDVELVRYY---LKRKILGKKL-LVDAI-----AEVDIYKFEPPDLPDMSF 56

Query:   108 -RDG-LSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
              R G L  HFF    K Y +G R  R   TEC        W  TGK RPV+ N +  G  
Sbjct:    57 IRSGDLKWHFFCPREKKYASGVRANRA--TECGY------WKTTGKERPVLCNSEVVG-- 106

Query:   166 KILVLYTNFGKNRKPEKTNWVMHQYHL 192
             KI  L  +FGK+ + E+T+WVMH+Y L
Sbjct:   107 KIKTLVYHFGKSPRGERTDWVMHEYRL 133

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00016636001 SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (431 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	470
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	7e-45
pfam04684	508	pfam04684, BAF1_ABF1, BAF1 / ABF1 chromatin reorga	8e-04

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  152 bits (387), Expect = 7e-45
 Identities = 53/149 (35%), Positives = 70/149 (46%), Gaps = 23/149 (15%)

Query: 49  LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT 107
           LP G +F PTD+EL+ + L+ KV  K +      + + IP    E  I    P  LP   
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLP-----LLDVIP----EVDIYKFEPWDLPDGK 51

Query: 108 RDGLSR--HFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMV-NGKQKGC 164
             G  R  +FF    + Y  G+R  R          G   W  TGK +PV+   G+  G 
Sbjct: 52  AKGGDREWYFFSPRDRKYPNGSRTNRAT--------GSGYWKATGKDKPVLSKGGEVVGM 103

Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHLG 193
           KK LV Y   G+  K EKT+WVMH+Y L 
Sbjct: 104 KKTLVFYK--GRAPKGEKTDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

>gnl|CDD|113452 pfam04684, BAF1_ABF1, BAF1 / ABF1 chromatin reorganising factor

 Score = 41.6 bits (97), Expect = 8e-04
 Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 9/56 (16%)

Query: 316 DHHQRPHHHLA-----HDHR---QQQQQHQQQHQQQQQQ-QHHTHHQQIATTAFHI 362
           DHHQ  HHH       H H+     Q  HQ  HQ QQQ  QH   HQQ      H+
Sbjct: 290 DHHQHQHHHHPSIPAHHQHQLPEGHQHDHQHHHQHQQQDLQHQEQHQQHVDNDHHV 345

ABF1 is a sequence-specific DNA binding protein involved in transcription activation, gene silencing and initiation of DNA replication. ABF1 is known to remodel chromatin, and it is proposed that it mediates its effects on transcription and gene expression by modifying local chromatin architecture. These functions require a conserved stretch of 20 amino acids in the C-terminal region of ABF1 (amino acids 639 to 662 S. cerevisiae). The N-terminal two thirds of the protein are necessary for DNA binding, and the N-terminus (amino acids 9 to 91 in S. cerevisiae) is thought to contain a novel zinc-finger motif which may stabilise the protein structure. Length = 508

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	470
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0
PF11498	468	Activator_LAG-3: Transcriptional activator LAG-3;	96.87
KOG1883	1517	consensus Cofactor required for Sp1 transcriptiona	84.19
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	82.68

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=3.2e-36  Score=268.20  Aligned_cols=126  Identities=40%  Similarity=0.699  Sum_probs=88.3

Q ss_pred             CCCCceeCCChHHHHH-HHHHhhhcCCCCCCCCccccccccccccCCCCCCCCCCCCCc-ccCCcceEEeecCCCCCCCC
Q 012155           49 LPAGVKFDPTDQELID-HLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGV-TRDGLSRHFFHRPSKAYTTG  126 (470)
Q Consensus        49 LPpG~RF~PTDeELI~-yL~~Ki~~~~~~~~~Pl~~~~I~~id~e~diy~~~Pw~Lp~~-~~~g~~~yFF~~~~~k~~~G  126 (470)
                      |||||||+|||+|||. ||++|+.+.++    |. .++|++    +|||++|||+||.. ...++.||||+++.+++.+|
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~----~~-~~~i~~----~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~   71 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPL----PC-EDVIHD----VDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNG   71 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HH----CS--CHSEE------GGGS-GGGCHHHSSS-SSEEEEEEE--------
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCC----Cc-ccceee----cccCccChHHhhhhccCCCceEEEEEecccccCCc
Confidence            8999999999999997 69999998865    22 245654    47999999999942 23456899999998888999


Q ss_pred             CcccccccccccCCCCCcEEeecCCCceEEe-CCeeeeeeEEEeeEeecCCCCCCCCcCeEEEEEeeC
Q 012155          127 TRKRRKIQTECDLQGGETRWHKTGKTRPVMV-NGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLG  193 (470)
Q Consensus       127 ~R~~R~~~~~~~~~~g~G~Wk~tG~~k~V~~-~g~~vG~Kk~l~Fy~~~G~~~~g~kT~WvMhEY~L~  193 (470)
                      .|++|++        ++|+||.+|++++|.+ +|.+||+|++|+||.  |+.+++.+|+|+||||+|.
T Consensus        72 ~r~~R~~--------~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~--~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   72 GRPNRVT--------GGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYS--GKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             --S-EEE--------TTEEEEEECEEEEEEE-TTCEEEEEEEEEEEE--SSTTS-EEEEEEEEEEEE-
T ss_pred             ccccccc--------cceEEeecccccccccccceeeeeEEEEEEEe--ccCCCCCcCCeEEEEEEeC
Confidence            9999964        5899999999999998 899999999999997  6777889999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

>PF11498 Activator_LAG-3: Transcriptional activator LAG-3; InterPro: IPR021587 The C

Probab=96.87  E-value=0.00025  Score=72.14  Aligned_cols=8  Identities=13%  Similarity=0.169  Sum_probs=0.0

Q ss_pred             CCCCcccc
Q 012155          419 GGRSASGL  426 (470)
Q Consensus       419 ~~~~~~g~  426 (470)
                      .+...+|.
T Consensus       429 hQn~~MGY  436 (468)
T PF11498_consen  429 HQNGGMGY  436 (468)
T ss_dssp             --------
T ss_pred             hhccCccc
Confidence            34444443

elegans Notch pathway, involved in the control of growth, differentiation and patterning in animal development, relies on either of the receptors GLP-1 or LIN-12 []. Both these receptors promote signalling by the recruitment of LAG-3 to target promoters, where it then acts as a transcriptional activator. LAG-3 works as a ternary complex together with the DNA binding protein, LAG-1 []. ; PDB: 2FO1_D.

>KOG1883 consensus Cofactor required for Sp1 transcriptional activation, subunit 3 [Transcription]

Probab=84.19  E-value=2.2  Score=50.15  Aligned_cols=22  Identities=27%  Similarity=0.360  Sum_probs=8.1

Q ss_pred             hhhHHHhHHHHhhhhhhhccch
Q 012155          329 HRQQQQQHQQQHQQQQQQQHHT  350 (470)
Q Consensus       329 qqqqqqqqQQQQQQQQQQQq~q  350 (470)
                      |.|++.|||++|||+++++|||
T Consensus      1430 q~q~t~q~q~~Qqq~~~~~qqq 1451 (1517)
T KOG1883|consen 1430 QMQDTSQHQTIQQQSNHPTQQQ 1451 (1517)
T ss_pred             hhhhhhHHHHHHHHhcchHHHH
Confidence            3333333333333333333333

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=82.68  E-value=0.78  Score=53.83  Aligned_cols=9  Identities=11%  Similarity=0.254  Sum_probs=4.7

Q ss_pred             CcEEeecCC
Q 012155          143 ETRWHKTGK  151 (470)
Q Consensus       143 ~G~Wk~tG~  151 (470)
                      -|.|+..+.
T Consensus      1675 ~gq~~p~i~ 1683 (2131)
T KOG4369|consen 1675 PGQWAPHIG 1683 (2131)
T ss_pred             ccccccccc
Confidence            456655443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	470
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		1e-11
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		1e-09
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		1e-09

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 47  LGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGV 106
           L LP G +F PTD EL++H   +  A   + P P+I         E  +    P  LP  
Sbjct: 13  LNLPPGFRFHPTDDELVEHYLCRKAAGQRL-PVPII--------AEVDLYKFDPWDLPER 63
Query: 107 TRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
              G    +F  P  + Y  G+R  R          G   W  TG  +PV   G+  G K
Sbjct: 64  ALFGAREWYFFTPRDRKYPNGSRPNR--------AAGNGYWKATGADKPVAPRGRTLGIK 115
Query: 166 KILVLYTNFGKNRKPEKTNWVMHQYHL 192
           K LV Y   GK  +  KT+W+MH+Y L
Sbjct: 116 KALVFYA--GKAPRGVKTDWIMHEYRL 140

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 62/148 (41%), Gaps = 22/148 (14%)
Query: 47  LGLPAGVKFDPTDQEL-IDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPG 105
           L LP G +F PTD+EL + +L  K    D          F   +  E  +    P  LP 
Sbjct: 18  LSLPPGFRFYPTDEELMVQYLCRKAAGYD----------FSLQLIAEIDLYKFDPWVLPN 67
Query: 106 VTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
               G    +F  P  + Y  G+R  R          G   W  TG  + +   G++ G 
Sbjct: 68  KALFGEKEWYFFSPRDRKYPNGSRPNR--------VAGSGYWKATGTDKIISTEGQRVGI 119
Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL 192
           KK LV Y   GK  K  KTNW+MH+Y L
Sbjct: 120 KKALVFYI--GKAPKGTKTNWIMHEYRL 145

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 62/148 (41%), Gaps = 22/148 (14%)
Query: 47  LGLPAGVKFDPTDQEL-IDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPG 105
           L LP G +F PTD+EL + +L  K    D          F   +  E  +    P  LP 
Sbjct: 15  LSLPPGFRFYPTDEELMVQYLCRKAAGYD----------FSLQLIAEIDLYKFDPWVLPN 64
Query: 106 VTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
               G    +F  P  + Y  G+R  R          G   W  TG  + +   G++ G 
Sbjct: 65  KALFGEKEWYFFSPRDRKYPNGSRPNR--------VAGSGYWKATGTDKIISTEGQRVGI 116
Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL 192
           KK LV Y   GK  K  KTNW+MH+Y L
Sbjct: 117 KKALVFYI--GKAPKGTKTNWIMHEYRL 142
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	470
1ut7_A	171	No apical meristem protein; transcription regulati	9e-26
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	2e-24

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  102 bits (256), Expect = 9e-26
 Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 26/176 (14%)

Query: 47  LGLPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPG 105
           L LP G +F PTD+EL+   L  K              + I  I+    +    P  LP 
Sbjct: 15  LSLPPGFRFYPTDEELMVQYLCRKAAGY------DFSLQLIAEID----LYKFDPWVLPN 64

Query: 106 VTRDG-LSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
               G    +FF    + Y  G+R  R   +          W  TG  + +   G++ G 
Sbjct: 65  KALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGY--------WKATGTDKIISTEGQRVGI 116

Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL----GQHEEEKEGELVVSKIFYQTQPRQ 216
           KK LV Y   GK  K  KTNW+MH+Y L     ++   K  + V+ +I+ +    Q
Sbjct: 117 KKALVFYI--GKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQ 170

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score = 98.6 bits (246), Expect = 2e-24
 Identities = 46/174 (26%), Positives = 69/174 (39%), Gaps = 31/174 (17%)

Query: 47  LGLPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPG 105
           L LP G +F PTD EL++H L  K   +       L    I  ++    +    P  LP 
Sbjct: 13  LNLPPGFRFHPTDDELVEHYLCRKAAGQ------RLPVPIIAEVD----LYKFDPWDLPE 62

Query: 106 VTR-DGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
                    +FF    + Y  G+R  R              W  TG  +PV   G+  G 
Sbjct: 63  RALFGAREWYFFTPRDRKYPNGSRPNRAAGNGY--------WKATGADKPVAPRGRTLGI 114

Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL---------GQHEEEKEGELVVSKIF 209
           KK LV Y   GK  +  KT+W+MH+Y L          +    +  + V+ +++
Sbjct: 115 KKALVFYA--GKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLY 166

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	470
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=3.1e-47  Score=353.28  Aligned_cols=150  Identities=31%  Similarity=0.577  Sum_probs=125.1

Q ss_pred             CCCCCCCCCceeCCChHHHHH-HHHHhhhcCCCCCCCCccccccccccccCCCCCCCCCCCCCcccCC-cceEEeecCCC
Q 012155           44 PDWLGLPAGVKFDPTDQELID-HLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDG-LSRHFFHRPSK  121 (470)
Q Consensus        44 ~~~~~LPpG~RF~PTDeELI~-yL~~Ki~~~~~~~~~Pl~~~~I~~id~e~diy~~~Pw~Lp~~~~~g-~~~yFF~~~~~  121 (470)
                      ...++|||||||+|||||||. ||++|+.+.++      +..+|+++    |||.+|||+||+.+..| .+||||+++.+
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~------~~~~I~ev----Dvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~   79 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRL------PVPIIAEV----DLYKFDPWDLPERALFGAREWYFFTPRDR   79 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCC------SSSCCEEC----CGGGSCGGGSGGGCSSCSSEEEEEEECCC
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCC------CcCeeeec----ccccCCchhhhhhhccCCceEEEEecccc
Confidence            456789999999999999998 59999998755      44677655    79999999999987655 46889988899


Q ss_pred             CCCCCCcccccccccccCCCCCcEEeecCCCceEEeCCeeeeeeEEEeeEeecCCCCCCCCcCeEEEEEeeCCCcc----
Q 012155          122 AYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEE----  197 (470)
Q Consensus       122 k~~~G~R~~R~~~~~~~~~~g~G~Wk~tG~~k~V~~~g~~vG~Kk~l~Fy~~~G~~~~g~kT~WvMhEY~L~~~~~----  197 (470)
                      +|++|.|.+|++        ++||||++|++++|..+|.+||+||+|+||.  |+++++.||+|+||||+|.....    
T Consensus        80 ky~~g~R~nR~t--------~~G~WkatG~dk~I~~~g~~vG~KktLvFy~--g~~p~g~kT~WvMhEY~L~~~~~~~~~  149 (174)
T 3ulx_A           80 KYPNGSRPNRAA--------GNGYWKATGADKPVAPRGRTLGIKKALVFYA--GKAPRGVKTDWIMHEYRLADAGRAAAG  149 (174)
T ss_dssp             -----CCSCEEE--------TTEEEEECSCCEEECCSSSCCEEEEEEEEEE--SSTTSCEEEEEEEEEEEECSCC-----
T ss_pred             ccCCCCCceeec--------CCceEccCCCCcEEeeCCcEEEEEEEEEEec--CCCCCCCcCCeEEEEEEeCCCCCcccc
Confidence            999999999985        5799999999999999999999999999999  88999999999999999987642    


Q ss_pred             -----ccCCCeEEEEEEeecc
Q 012155          198 -----EKEGELVVSKIFYQTQ  213 (470)
Q Consensus       198 -----~~~~~~VLCKI~~k~~  213 (470)
                           ...++|||||||+|+.
T Consensus       150 ~~~~~~~~~~wVlCrvf~K~~  170 (174)
T 3ulx_A          150 AKKGSLRLDDWVLCRLYNKKN  170 (174)
T ss_dssp             ------CCSSEEEEEEEESCC
T ss_pred             cccCCCCCCCEEEEEEEEcCC
Confidence                 1357999999999863

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=3e-47  Score=353.06  Aligned_cols=151  Identities=33%  Similarity=0.554  Sum_probs=123.0

Q ss_pred             CCCCCCCCCceeCCChHHHHHH-HHHhhhcCCCCCCCCccccccccccccCCCCCCCCCCCCCcccCC-cceEEeecCCC
Q 012155           44 PDWLGLPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDG-LSRHFFHRPSK  121 (470)
Q Consensus        44 ~~~~~LPpG~RF~PTDeELI~y-L~~Ki~~~~~~~~~Pl~~~~I~~id~e~diy~~~Pw~Lp~~~~~g-~~~yFF~~~~~  121 (470)
                      .+++.|||||||+|||||||.| |++||.+.++      +..+|+++    |||.+|||+||+....| .+||||+++.+
T Consensus        12 ~~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~------~~~~I~e~----Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~   81 (171)
T 1ut7_A           12 LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDF------SLQLIAEI----DLYKFDPWVLPNKALFGEKEWYFFSPRDR   81 (171)
T ss_dssp             CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCC------SSCCSEEC----CGGGSCGGGHHHHSSSCSSEEEEEEECCC
T ss_pred             ccccCCCCcceeCCChHHHHHHHHHHHhcCCCC------CCCeEeec----ccccCChhHhhchhhcCCccEEEEecccc
Confidence            5788999999999999999985 9999997754      45677655    69999999999987654 56889999999


Q ss_pred             CCCCCCcccccccccccCCCCCcEEeecCCCceEEeCCeeeeeeEEEeeEeecCCCCCCCCcCeEEEEEeeCCCcc----
Q 012155          122 AYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEE----  197 (470)
Q Consensus       122 k~~~G~R~~R~~~~~~~~~~g~G~Wk~tG~~k~V~~~g~~vG~Kk~l~Fy~~~G~~~~g~kT~WvMhEY~L~~~~~----  197 (470)
                      +|++|.|.+|++        ++||||++|++++|..+|.+||+||+|+||.  |+++++.||+|+||||+|.....    
T Consensus        82 k~~~g~R~~R~t--------~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~--g~~p~g~kT~WvMhEY~l~~~~~~~~~  151 (171)
T 1ut7_A           82 KYPNGSRPNRVA--------GSGYWKATGTDKIISTEGQRVGIKKALVFYI--GKAPKGTKTNWIMHEYRLIEPSRRNGS  151 (171)
T ss_dssp             -------CCEEE--------TTEEEEEEEEEEEEEETTEEEEEEEEEEEEE--SSTTSCEEEEEEEEEEEECCCC-----
T ss_pred             ccCCCCcccccC--------CCCEEeccCCCceEEecCcEEEEEEEEEEEc--CcCCCCCcCCeEEEEEEcCCCccccCc
Confidence            999999999985        5799999999999999999999999999999  88899999999999999987642    


Q ss_pred             ccCCCeEEEEEEeeccc
Q 012155          198 EKEGELVVSKIFYQTQP  214 (470)
Q Consensus       198 ~~~~~~VLCKI~~k~~~  214 (470)
                      ...++|||||||+|...
T Consensus       152 ~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A          152 TKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             ---CCEEEEEEEECC--
T ss_pred             ccCCCEEEEEEEEcCCC
Confidence            24579999999999753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	470
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	3e-39
d1fxza1	239	b.82.1.2 (A:10-248) Seed storage 7S protein {Soybe	6e-04

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  137 bits (346), Expect = 3e-39
 Identities = 48/182 (26%), Positives = 71/182 (39%), Gaps = 24/182 (13%)

Query: 35  GCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDG 94
             G +       L LP G +F PTD+EL+     +         +    + I     E  
Sbjct: 3   HMGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCR-----KAAGYDFSLQLIA----EID 53

Query: 95  ICYTHPEKLPGVTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTR 153
           +    P  LP     G    +F  P  + Y  G+R  R          G   W  TG  +
Sbjct: 54  LYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVA--------GSGYWKATGTDK 105

Query: 154 PVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEE----KEGELVVSKIF 209
            +   G++ G KK LV Y   GK  K  KTNW+MH+Y L +        K  + V+ +I+
Sbjct: 106 IISTEGQRVGIKKALVFY--IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY 163

Query: 210 YQ 211
            +
Sbjct: 164 KK 165

>d1fxza1 b.82.1.2 (A:10-248) Seed storage 7S protein {Soybean (Glycine max), proglycinin [TaxId: 3847]} Length = 239

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: Germin/Seed storage 7S protein
domain: Seed storage 7S protein
species: Soybean (Glycine max), proglycinin [TaxId: 3847]

 Score = 39.1 bits (91), Expect = 6e-04
 Identities = 22/137 (16%), Positives = 45/137 (32%), Gaps = 12/137 (8%)

Query: 330 RQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHISR-PSHPISTIISP--SPLHHTSII-- 384
              ++  Q Q + Q  +    H +        +   P+     + +   +P+   SII  
Sbjct: 81  STFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDT 140

Query: 385 ------LDEDSYHVSRIMLQNESFQQQQQQQQQQQQHHKLGGRSASGLEELIMGCTSSSD 438
                 LD+          Q + F + QQ+Q   Q       +        I+    + +
Sbjct: 141 NSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQKGKHQQEEENEGGSIL-SGFTLE 199

Query: 439 IKEESSMTNPQEAEWLK 455
             E +   + Q A+ L+
Sbjct: 200 FLEHAFSVDKQIAKNLQ 216

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	470
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.6e-44  Score=331.71  Aligned_cols=149  Identities=33%  Similarity=0.536  Sum_probs=120.8

Q ss_pred             CCCCCCCCCceeCCChHHHHH-HHHHhhhcCCCCCCCCccccccccccccCCCCCCCCCCCCCcccC-CcceEEeecCCC
Q 012155           44 PDWLGLPAGVKFDPTDQELID-HLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRD-GLSRHFFHRPSK  121 (470)
Q Consensus        44 ~~~~~LPpG~RF~PTDeELI~-yL~~Ki~~~~~~~~~Pl~~~~I~~id~e~diy~~~Pw~Lp~~~~~-g~~~yFF~~~~~  121 (470)
                      ...+.|||||||+|||||||. ||++||.+.++      +.++|+++    |||.+|||+||+.... +++||||+++.+
T Consensus        12 ~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l------~~~~I~~~----Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~   81 (166)
T d1ut7a_          12 LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDF------SLQLIAEI----DLYKFDPWVLPNKALFGEKEWYFFSPRDR   81 (166)
T ss_dssp             CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCC------SSCCSEEC----CGGGSCGGGHHHHSSSCSSEEEEEEECCC
T ss_pred             cccccCCCccccCCCcHHHHHHHHHHHHcCCCC------Ccccceec----cCCcCChhhccchhccCcceEEEEeeecc
Confidence            577899999999999999998 59999987654      56788765    6999999999987654 356888888888


Q ss_pred             CCCCCCcccccccccccCCCCCcEEeecCCCceEEeCCeeeeeeEEEeeEeecCCCCCCCCcCeEEEEEeeCCCcc----
Q 012155          122 AYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEE----  197 (470)
Q Consensus       122 k~~~G~R~~R~~~~~~~~~~g~G~Wk~tG~~k~V~~~g~~vG~Kk~l~Fy~~~G~~~~g~kT~WvMhEY~L~~~~~----  197 (470)
                      ++++|.|.+|++        ++|+||.+|+++.|.++|.+||+||+|+||.  |+.+++.+|+|+||||+|.....    
T Consensus        82 k~~~g~r~~R~~--------g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~--~~~~~~~~t~W~M~EY~l~~~~~~~~~  151 (166)
T d1ut7a_          82 KYPNGSRPNRVA--------GSGYWKATGTDKIISTEGQRVGIKKALVFYI--GKAPKGTKTNWIMHEYRLIEPSRRNGS  151 (166)
T ss_dssp             -------CCEEE--------TTEEEEEEEEEEEEEETTEEEEEEEEEEEEE--SSTTSCEEEEEEEEEEEECCCC-----
T ss_pred             ccCCCCcccccc--------CCCEecccCCCceEecCCcEEEEEEEEEEEe--cCCCCCCccCeEEEEEecCCcccccCc
Confidence            999999999975        5799999999999999999999999999998  78889999999999999987642    


Q ss_pred             ccCCCeEEEEEEeec
Q 012155          198 EKEGELVVSKIFYQT  212 (470)
Q Consensus       198 ~~~~~~VLCKI~~k~  212 (470)
                      ...++|||||||+|+
T Consensus       152 ~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         152 TKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             ---CCEEEEEEEECC
T ss_pred             cccCCEEEEEEEecC
Confidence            245699999999884