Citrus Sinensis ID: 012182
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 469 | 2.2.26 [Sep-21-2011] | |||||||
| B9RAJ0 | 491 | Probable aspartyl aminope | N/A | no | 0.869 | 0.830 | 0.486 | 1e-126 | |
| Q54M70 | 484 | Aspartyl aminopeptidase O | yes | no | 0.848 | 0.822 | 0.410 | 1e-100 | |
| Q9ULA0 | 475 | Aspartyl aminopeptidase O | yes | no | 0.889 | 0.877 | 0.421 | 1e-99 | |
| Q5RBT2 | 471 | Aspartyl aminopeptidase O | yes | no | 0.884 | 0.881 | 0.418 | 4e-99 | |
| Q2HJH1 | 471 | Aspartyl aminopeptidase O | yes | no | 0.884 | 0.881 | 0.421 | 5e-99 | |
| Q9Z2W0 | 473 | Aspartyl aminopeptidase O | yes | no | 0.891 | 0.883 | 0.407 | 2e-96 | |
| Q2UPZ7 | 498 | Aspartyl aminopeptidase O | yes | no | 0.886 | 0.835 | 0.410 | 3e-96 | |
| O36014 | 467 | Aspartyl aminopeptidase 1 | yes | no | 0.861 | 0.865 | 0.367 | 4e-83 | |
| Q19087 | 470 | Putative aspartyl aminope | yes | no | 0.831 | 0.829 | 0.376 | 2e-77 | |
| P38821 | 490 | Aspartyl aminopeptidase 4 | yes | no | 0.846 | 0.810 | 0.366 | 3e-77 |
| >sp|B9RAJ0|DNPEP_RICCO Probable aspartyl aminopeptidase OS=Ricinus communis GN=RCOM_1506700 PE=2 SV=2 | Back alignment and function desciption |
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Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/483 (48%), Positives = 302/483 (62%), Gaps = 75/483 (15%)
Query: 59 SIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVA 118
SI DL+++LN S T FHA EAK+ L +G+ ++E D+W+L+ G YFFTRN S +VA
Sbjct: 12 SIDSDLINFLNASPTAFHAIDEAKKRLKHSGYVQVSERDDWKLELGKRYFFTRNHSTIVA 71
Query: 119 FAVG---------------------------------------QKYS------------- 126
FA+G Q Y
Sbjct: 72 FAIGKKYVAGNGFYVVGAHTDSPCIKLKPVSKVTKSGYLEVGVQPYGGGLWHTWFDRDLA 131
Query: 127 -VGRVIVRGSDG---SFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLA 182
GRVIVR S+ H+LV+++ P++RVPTLAIHLDR VN DGFK N ++ L+P+LA
Sbjct: 132 VAGRVIVREEKHGSVSYSHRLVRIEEPIMRVPTLAIHLDRNVNTDGFKVNTQSHLLPVLA 191
Query: 183 TK----------------SEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIAS 226
T ++E + K T+++ HH L+Q+++ ++GC DI
Sbjct: 192 TSVKAELSKVVAENGTVGNDEETDGMKSSKGTTNANSKHHSLLLQMIAGQIGCNGSDICD 251
Query: 227 IELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVAL 286
EL CDTQPS + GA EFIFSGRLDNL S+C L+ALID+ S S+L +E +RMVAL
Sbjct: 252 FELQACDTQPSVIAGAAKEFIFSGRLDNLCMSFCSLKALIDATASDSHLENESGVRMVAL 311
Query: 287 FDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHP 346
FD+EEVGSDS QGAG+P MF A+ RI + + I++SFLVSADMAH +HP
Sbjct: 312 FDHEEVGSDSAQGAGSPVMFDALSRITSTFNSD---SKLLRKAIQKSFLVSADMAHALHP 368
Query: 347 NFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGC 406
N+++KHEE+H+P M GLVIKHNANQRYAT+ VT+FLFKEIA HNLP Q+FVVRNDM C
Sbjct: 369 NYADKHEENHQPRMHGGLVIKHNANQRYATNSVTSFLFKEIASKHNLPVQDFVVRNDMPC 428
Query: 407 GSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLI 466
GSTIGPILASGVGIRTVD G QLSMHS+RE+C +D+ +Y HFKAF+E FS +D K+
Sbjct: 429 GSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKYSYEHFKAFFEDFSHLDSKIT 488
Query: 467 VDF 469
VD
Sbjct: 489 VDM 491
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Likely to play an important role in intracellular protein and peptide metabolism. Ricinus communis (taxid: 3988) EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 2EC: 1 |
| >sp|Q54M70|DNPEP_DICDI Aspartyl aminopeptidase OS=Dictyostelium discoideum GN=dnpep PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9ULA0|DNPEP_HUMAN Aspartyl aminopeptidase OS=Homo sapiens GN=DNPEP PE=1 SV=1 | Back alignment and function description |
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| >sp|Q5RBT2|DNPEP_PONAB Aspartyl aminopeptidase OS=Pongo abelii GN=DNPEP PE=2 SV=1 | Back alignment and function description |
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| >sp|Q2HJH1|DNPEP_BOVIN Aspartyl aminopeptidase OS=Bos taurus GN=DNPEP PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9Z2W0|DNPEP_MOUSE Aspartyl aminopeptidase OS=Mus musculus GN=Dnpep PE=2 SV=2 | Back alignment and function description |
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| >sp|Q2UPZ7|DNPEP_ASPOR Aspartyl aminopeptidase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=dapA PE=1 SV=1 | Back alignment and function description |
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| >sp|O36014|DNPEP_SCHPO Aspartyl aminopeptidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=aap1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q19087|DNPEP_CAEEL Putative aspartyl aminopeptidase OS=Caenorhabditis elegans GN=F01F1.9 PE=1 SV=1 | Back alignment and function description |
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| >sp|P38821|DNPEP_YEAST Aspartyl aminopeptidase 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APE4 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 469 | ||||||
| 224097624 | 462 | predicted protein [Populus trichocarpa] | 0.872 | 0.885 | 0.740 | 0.0 | |
| 225464136 | 535 | PREDICTED: aspartyl aminopeptidase [Viti | 0.886 | 0.777 | 0.741 | 0.0 | |
| 255568036 | 526 | Aspartyl aminopeptidase, putative [Ricin | 0.989 | 0.882 | 0.664 | 0.0 | |
| 15238278 | 526 | aspartyl aminopeptidase [Arabidopsis tha | 0.880 | 0.785 | 0.717 | 0.0 | |
| 26452642 | 526 | putative aspartyl aminopeptidase [Arabid | 0.880 | 0.785 | 0.715 | 0.0 | |
| 297810563 | 525 | hypothetical protein ARALYDRAFT_487250 [ | 0.880 | 0.786 | 0.711 | 0.0 | |
| 357442997 | 550 | Aspartyl aminopeptidase [Medicago trunca | 0.936 | 0.798 | 0.662 | 0.0 | |
| 449466260 | 527 | PREDICTED: probable aspartyl aminopeptid | 0.995 | 0.886 | 0.650 | 0.0 | |
| 356576295 | 518 | PREDICTED: aspartyl aminopeptidase-like | 0.889 | 0.805 | 0.694 | 0.0 | |
| 357126946 | 520 | PREDICTED: aspartyl aminopeptidase-like | 0.901 | 0.813 | 0.665 | 0.0 |
| >gi|224097624|ref|XP_002311016.1| predicted protein [Populus trichocarpa] gi|222850836|gb|EEE88383.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/463 (74%), Positives = 370/463 (79%), Gaps = 54/463 (11%)
Query: 59 SIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVA 118
SIVGDLLDYLNESWT FHATAEAKR LIDAGF+LLNEN+EWELKPGG YFFTRNMSCLVA
Sbjct: 1 SIVGDLLDYLNESWTQFHATAEAKRQLIDAGFDLLNENEEWELKPGGRYFFTRNMSCLVA 60
Query: 119 FAVGQKYSVG-------------------------------------------------- 128
FA+G+KYSVG
Sbjct: 61 FAIGEKYSVGNGFHVIAAHTDSPCLKLKPRSASSKSSYLMVNVQTYGGGLWHTWFDRDLS 120
Query: 129 ---RVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKS 185
RVIVRGSDGSFLHKLVK+KRPLLR+PTLAIHLD TVNKDGFKPNLET LIPLLATKS
Sbjct: 121 VAGRVIVRGSDGSFLHKLVKIKRPLLRIPTLAIHLDHTVNKDGFKPNLETHLIPLLATKS 180
Query: 186 EETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNE 245
EE S E KEK+ T SSK HHP LMQ+LS EL C DDI SIELN+CDTQPSCLGG NNE
Sbjct: 181 EEGSSETKEKN-TESSKAVHHPLLMQVLSDELSCSIDDIVSIELNVCDTQPSCLGGGNNE 239
Query: 246 FIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTM 305
FIFSGRLDNLASSYC LRALIDSC S S+LS++ A+RM+ALFDNEEVGS S QGAGAPTM
Sbjct: 240 FIFSGRLDNLASSYCALRALIDSCESSSDLSNDTAVRMIALFDNEEVGSGSVQGAGAPTM 299
Query: 306 FQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLV 365
FQA++RI G LA +V+E + E IRQSFLVSADMAHGVHPNF EKHEEHHRPEMQKGLV
Sbjct: 300 FQAMKRIAGCLARNNVNEGAIERAIRQSFLVSADMAHGVHPNFMEKHEEHHRPEMQKGLV 359
Query: 366 IKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDC 425
IKHNANQRYATSGVTAFLFKE+ K+HNLP+QEFVVRNDMGCGSTIGPILASG GIRTVDC
Sbjct: 360 IKHNANQRYATSGVTAFLFKEVGKIHNLPSQEFVVRNDMGCGSTIGPILASGAGIRTVDC 419
Query: 426 GIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD 468
GI QLSMHSVREIC ED+DIAY++FKAFY++FSSIDKKL VD
Sbjct: 420 GIPQLSMHSVREICAKEDVDIAYKYFKAFYQNFSSIDKKLEVD 462
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225464136|ref|XP_002266672.1| PREDICTED: aspartyl aminopeptidase [Vitis vinifera] gi|296087973|emb|CBI35256.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255568036|ref|XP_002524995.1| Aspartyl aminopeptidase, putative [Ricinus communis] gi|223535739|gb|EEF37402.1| Aspartyl aminopeptidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|15238278|ref|NP_196091.1| aspartyl aminopeptidase [Arabidopsis thaliana] gi|7413533|emb|CAB86013.1| aspartyl aminopeptidase-like protein [Arabidopsis thaliana] gi|9758446|dbj|BAB08975.1| aspartyl aminopeptidase [Arabidopsis thaliana] gi|332003391|gb|AED90774.1| aspartyl aminopeptidase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|26452642|dbj|BAC43404.1| putative aspartyl aminopeptidase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297810563|ref|XP_002873165.1| hypothetical protein ARALYDRAFT_487250 [Arabidopsis lyrata subsp. lyrata] gi|297319002|gb|EFH49424.1| hypothetical protein ARALYDRAFT_487250 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|357442997|ref|XP_003591776.1| Aspartyl aminopeptidase [Medicago truncatula] gi|355480824|gb|AES62027.1| Aspartyl aminopeptidase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|449466260|ref|XP_004150844.1| PREDICTED: probable aspartyl aminopeptidase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356576295|ref|XP_003556268.1| PREDICTED: aspartyl aminopeptidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357126946|ref|XP_003565148.1| PREDICTED: aspartyl aminopeptidase-like [Brachypodium distachyon] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 469 | ||||||
| TAIR|locus:2175423 | 526 | AT5G04710 [Arabidopsis thalian | 0.722 | 0.644 | 0.782 | 2.2e-174 | |
| TAIR|locus:2143990 | 477 | AT5G60160 [Arabidopsis thalian | 0.718 | 0.706 | 0.545 | 5.9e-118 | |
| UNIPROTKB|F1PVI2 | 471 | DNPEP "Uncharacterized protein | 0.716 | 0.713 | 0.481 | 2.1e-94 | |
| DICTYBASE|DDB_G0286149 | 484 | dnpep "aspartyl aminopeptidase | 0.710 | 0.688 | 0.460 | 5.4e-94 | |
| UNIPROTKB|E7ETB3 | 493 | DNPEP "Aspartyl aminopeptidase | 0.716 | 0.681 | 0.475 | 2.3e-93 | |
| UNIPROTKB|Q9ULA0 | 475 | DNPEP "Aspartyl aminopeptidase | 0.716 | 0.707 | 0.475 | 6.2e-93 | |
| UNIPROTKB|Q2HJH1 | 471 | DNPEP "Aspartyl aminopeptidase | 0.716 | 0.713 | 0.469 | 7.9e-93 | |
| RGD|1583848 | 475 | Dnpep "aspartyl aminopeptidase | 0.716 | 0.707 | 0.472 | 4.9e-91 | |
| MGI|MGI:1278328 | 473 | Dnpep "aspartyl aminopeptidase | 0.716 | 0.710 | 0.466 | 8e-91 | |
| UNIPROTKB|F1SR76 | 473 | DNPEP "Uncharacterized protein | 0.716 | 0.710 | 0.472 | 4.4e-90 |
| TAIR|locus:2175423 AT5G04710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1402 (498.6 bits), Expect = 2.2e-174, Sum P(2) = 2.2e-174
Identities = 267/341 (78%), Positives = 295/341 (86%)
Query: 128 GRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLAXXXXX 187
GR IVR SDGSF+H+LVKVKRPLLRVPTLAIHLDRTVN DGFKPNLETQL+PLLA
Sbjct: 187 GRAIVRASDGSFVHRLVKVKRPLLRVPTLAIHLDRTVNSDGFKPNLETQLVPLLATKSDE 246
Query: 188 XXXXXXXXXXXXXXXXXHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFI 247
HHP LMQILS +L C +DI S+ELNICDTQPSCLGGANNEFI
Sbjct: 247 SSAESKDKNVSSKDA--HHPLLMQILSDDLDCKVEDIVSLELNICDTQPSCLGGANNEFI 304
Query: 248 FSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQ 307
FSGRLDNLASS+C LRALIDSC S NLS+EH IRM+ALFDNEEVGSDS QGAGAPTMFQ
Sbjct: 305 FSGRLDNLASSFCALRALIDSCESSENLSTEHDIRMIALFDNEEVGSDSCQGAGAPTMFQ 364
Query: 308 AIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIK 367
A+RRIV SL ++ V+E +F+ IR+SFLVSADMAHGVHPNF++KHEE+HRP++ KGLVIK
Sbjct: 365 AMRRIVSSLGNKQVTECTFDRAIRKSFLVSADMAHGVHPNFADKHEENHRPQLHKGLVIK 424
Query: 368 HNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGI 427
HNANQRYATSG+T+FLFKE+AKLH+LP QEFVVRNDMGCGSTIGPILASGVGIRTVDCGI
Sbjct: 425 HNANQRYATSGITSFLFKEVAKLHDLPIQEFVVRNDMGCGSTIGPILASGVGIRTVDCGI 484
Query: 428 AQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD 468
AQLSMHSVREICGT+DIDIAYRHFKAFY SFSS+DKKL+VD
Sbjct: 485 AQLSMHSVREICGTDDIDIAYRHFKAFYRSFSSVDKKLVVD 525
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| TAIR|locus:2143990 AT5G60160 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PVI2 DNPEP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0286149 dnpep "aspartyl aminopeptidase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E7ETB3 DNPEP "Aspartyl aminopeptidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9ULA0 DNPEP "Aspartyl aminopeptidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2HJH1 DNPEP "Aspartyl aminopeptidase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| RGD|1583848 Dnpep "aspartyl aminopeptidase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| MGI|MGI:1278328 Dnpep "aspartyl aminopeptidase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SR76 DNPEP "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q1IDE6 | APEB_PSEE4 | 3, ., 4, ., 1, 1, ., - | 0.3686 | 0.8038 | 0.8787 | yes | no |
| A0PYH7 | APEB_CLONN | 3, ., 4, ., 1, 1, ., - | 0.3125 | 0.8166 | 0.8845 | yes | no |
| Q19087 | DNPEP_CAEEL | 3, ., 4, ., 1, 1, ., 2, 1 | 0.3763 | 0.8315 | 0.8297 | yes | no |
| O36014 | DNPEP_SCHPO | 3, ., 4, ., 1, 1, ., 2, 1 | 0.3676 | 0.8614 | 0.8650 | yes | no |
| Q5RBT2 | DNPEP_PONAB | 3, ., 4, ., 1, 1, ., 2, 1 | 0.4189 | 0.8848 | 0.8811 | yes | no |
| Q9ULA0 | DNPEP_HUMAN | 3, ., 4, ., 1, 1, ., 2, 1 | 0.4213 | 0.8891 | 0.8778 | yes | no |
| Q54M70 | DNPEP_DICDI | 3, ., 4, ., 1, 1, ., 2, 1 | 0.4106 | 0.8486 | 0.8223 | yes | no |
| Q2HJH1 | DNPEP_BOVIN | 3, ., 4, ., 1, 1, ., 2, 1 | 0.4210 | 0.8848 | 0.8811 | yes | no |
| P38821 | DNPEP_YEAST | 3, ., 4, ., 1, 1, ., 2, 1 | 0.3661 | 0.8464 | 0.8102 | yes | no |
| Q9Z2W0 | DNPEP_MOUSE | 3, ., 4, ., 1, 1, ., 2, 1 | 0.4079 | 0.8912 | 0.8837 | yes | no |
| Q2UPZ7 | DNPEP_ASPOR | 3, ., 4, ., 1, 1, ., 2, 1 | 0.4103 | 0.8869 | 0.8353 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.11 | 0.766 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.VIII.2387.1 | hypothetical protein (462 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 469 | |||
| cd05658 | 424 | cd05658, M18_DAP, M18 Peptidase Aspartyl aminopept | 0.0 | |
| PTZ00371 | 465 | PTZ00371, PTZ00371, aspartyl aminopeptidase; Provi | 1e-174 | |
| PRK02813 | 428 | PRK02813, PRK02813, putative aminopeptidase 2; Pro | 1e-149 | |
| pfam02127 | 425 | pfam02127, Peptidase_M18, Aminopeptidase I zinc me | 1e-134 | |
| COG1362 | 437 | COG1362, LAP4, Aspartyl aminopeptidase [Amino acid | 1e-131 | |
| cd05639 | 427 | cd05639, M18, M18 Peptidase aminopeptidase family | 1e-94 | |
| cd05659 | 443 | cd05659, M18_API, M18 Peptidase Aminopeptidase I | 4e-27 | |
| PRK02256 | 462 | PRK02256, PRK02256, putative aminopeptidase 1; Pro | 5e-21 | |
| cd05639 | 427 | cd05639, M18, M18 Peptidase aminopeptidase family | 1e-11 | |
| cd05656 | 336 | cd05656, M42_Frv, M42 Peptidase, Endoglucanases | 1e-04 |
| >gnl|CDD|193534 cd05658, M18_DAP, M18 Peptidase Aspartyl aminopeptidase | Back alignment and domain information |
|---|
Score = 558 bits (1441), Expect = 0.0
Identities = 197/447 (44%), Positives = 256/447 (57%), Gaps = 78/447 (17%)
Query: 63 DLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVG 122
DLLD+++ S +PFHA AE K+ L AGF L+E ++W LKPGG Y+ TRN S L+AF VG
Sbjct: 3 DLLDFIDASPSPFHAVAEMKKRLEAAGFTELDEREKWNLKPGGKYYVTRNGSSLIAFTVG 62
Query: 123 QKYSVG-----------------------------------------------------R 129
+KY G R
Sbjct: 63 EKYKPGNGFRIVGAHTDSPCLKLKPNPEITSEGYLQLGVEVYGGGLLNTWFDRDLSLAGR 122
Query: 130 VIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETS 189
V+V+ DG KLV + RP+LR+P LAIHL+R VN +GFK N + L+P+L E+
Sbjct: 123 VVVKDGDGKPESKLVDIDRPILRIPNLAIHLNREVN-EGFKLNKQKHLLPILGLGEEDEK 181
Query: 190 VEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFS 249
H L+ +L++ELG +DI +L + DTQP LGG N+EFI S
Sbjct: 182 ---------------HEDDLLDLLAEELGVKPEDILDFDLYLYDTQPGALGGLNDEFISS 226
Query: 250 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAI 309
RLDNLAS Y L AL+D+ + I ++ALFDNEEVGS+S QGA +P + +
Sbjct: 227 PRLDNLASVYAALEALLDAE------NDNSGINVIALFDNEEVGSESKQGADSPFLEDVL 280
Query: 310 RRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHN 369
RI +L S + + +SFL+SADMAH VHPN+ EKH+ +HRP + G VIK N
Sbjct: 281 ERIAAALGG---SREEYYRALARSFLISADMAHAVHPNYPEKHDPNHRPLLNGGPVIKIN 337
Query: 370 ANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ 429
ANQRYAT V+A +FKE+ + +P QEFV RNDM CGSTIGPI AS +GIRTVD GI Q
Sbjct: 338 ANQRYATDAVSAAVFKELCEKAGVPVQEFVNRNDMPCGSTIGPITASRLGIRTVDIGIPQ 397
Query: 430 LSMHSVREICGTEDIDIAYRHFKAFYE 456
LSMHS+RE G +D++ R KAF+E
Sbjct: 398 LSMHSIRETAGVKDVEYLIRLLKAFFE 424
|
Peptidase M18 family, Aspartyl aminopeptidase (DAP; EC 3.4.11.21) subfamily. DAP is widely distributed in bacteria and eukaryotes, but only the mammalian aspartyl aminopeptidase has been characterized to date. DAP cleaves only unblocked N-terminal acidic amino-acid residues. It is a cytosolic enzyme and is highly conserved; for example, the human enzyme has 51% identity to an aspartyl aminopeptidase-like protein in Arabidopsis thaliana. The mammalian DAP is highly selective for hydrolysis of N-terminal aspartate or glutamate residues from peptides. Unlike glutamyl aminopeptidase (M42), DAP does not cleave simple aminoaryl-arylamide substrates. Although there is lack of understanding of the function of this enzyme, it is thought to act in concert with other aminopeptidases to facilitate protein turnover because of their restricted specificities for the N-terminal aspartic and glutamic acid, which cannot be cleaved by any other aminopeptidases. The mammalian aspartyl aminopeptidase is possibly contributing to the catabolism of peptides, including those produced by the proteasome. It may also trim the N-terminus of peptides that are intended for the MHC class I system. In humans, DAP has been implicated in the the specific function of converting angiotensin II to the vasoactive angiotensin III within the brain. Length = 424 |
| >gnl|CDD|240387 PTZ00371, PTZ00371, aspartyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235073 PRK02813, PRK02813, putative aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|216888 pfam02127, Peptidase_M18, Aminopeptidase I zinc metalloprotease (M18) | Back alignment and domain information |
|---|
| >gnl|CDD|224281 COG1362, LAP4, Aspartyl aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|193518 cd05639, M18, M18 Peptidase aminopeptidase family | Back alignment and domain information |
|---|
| >gnl|CDD|193535 cd05659, M18_API, M18 Peptidase Aminopeptidase I | Back alignment and domain information |
|---|
| >gnl|CDD|235018 PRK02256, PRK02256, putative aminopeptidase 1; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|193518 cd05639, M18, M18 Peptidase aminopeptidase family | Back alignment and domain information |
|---|
| >gnl|CDD|193532 cd05656, M42_Frv, M42 Peptidase, Endoglucanases | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 469 | |||
| KOG2596 | 479 | consensus Aminopeptidase I zinc metalloprotease (M | 100.0 | |
| PTZ00371 | 465 | aspartyl aminopeptidase; Provisional | 100.0 | |
| COG1362 | 437 | LAP4 Aspartyl aminopeptidase [Amino acid transport | 100.0 | |
| PF02127 | 432 | Peptidase_M18: Aminopeptidase I zinc metalloprotea | 100.0 | |
| PRK02813 | 428 | putative aminopeptidase 2; Provisional | 100.0 | |
| PRK02256 | 462 | putative aminopeptidase 1; Provisional | 100.0 | |
| PRK09864 | 356 | putative peptidase; Provisional | 100.0 | |
| COG1363 | 355 | FrvX Cellulase M and related proteins [Carbohydrat | 100.0 | |
| TIGR03107 | 350 | glu_aminopep glutamyl aminopeptidase. This model r | 100.0 | |
| PRK09961 | 344 | exoaminopeptidase; Provisional | 100.0 | |
| PF05343 | 292 | Peptidase_M42: M42 glutamyl aminopeptidase; InterP | 100.0 | |
| TIGR03106 | 343 | trio_M42_hydro hydrolase, peptidase M42 family. Th | 100.0 | |
| PF01546 | 189 | Peptidase_M20: Peptidase family M20/M25/M40 This f | 98.48 | |
| TIGR01883 | 361 | PepT-like peptidase T-like protein. This model rep | 98.33 | |
| PRK00466 | 346 | acetyl-lysine deacetylase; Validated | 97.41 | |
| TIGR01893 | 477 | aa-his-dipept aminoacyl-histidine dipeptidase. | 97.26 | |
| PRK10199 | 346 | alkaline phosphatase isozyme conversion aminopepti | 97.03 | |
| PRK13381 | 404 | peptidase T; Provisional | 96.97 | |
| PRK05469 | 408 | peptidase T; Provisional | 96.9 | |
| PRK08554 | 438 | peptidase; Reviewed | 96.71 | |
| PF04389 | 179 | Peptidase_M28: Peptidase family M28; InterPro: IPR | 96.68 | |
| PRK12891 | 414 | allantoate amidohydrolase; Reviewed | 96.3 | |
| PRK07473 | 376 | carboxypeptidase; Provisional | 96.22 | |
| PRK07338 | 402 | hypothetical protein; Provisional | 96.22 | |
| PRK08652 | 347 | acetylornithine deacetylase; Provisional | 96.05 | |
| TIGR01246 | 370 | dapE_proteo succinyl-diaminopimelate desuccinylase | 95.99 | |
| TIGR01882 | 410 | peptidase-T peptidase T. This model represents a t | 95.9 | |
| PRK06837 | 427 | acetylornithine deacetylase; Provisional | 95.74 | |
| TIGR01902 | 336 | dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d | 95.7 | |
| PRK13983 | 400 | diaminopimelate aminotransferase; Provisional | 95.54 | |
| TIGR01880 | 400 | Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase | 95.54 | |
| PRK12890 | 414 | allantoate amidohydrolase; Reviewed | 95.41 | |
| PRK09290 | 413 | allantoate amidohydrolase; Reviewed | 95.37 | |
| PRK04443 | 348 | acetyl-lysine deacetylase; Provisional | 95.06 | |
| COG2195 | 414 | PepD Di- and tripeptidases [Amino acid transport a | 95.0 | |
| PRK08651 | 394 | succinyl-diaminopimelate desuccinylase; Reviewed | 94.94 | |
| PRK13009 | 375 | succinyl-diaminopimelate desuccinylase; Reviewed | 94.83 | |
| PRK06915 | 422 | acetylornithine deacetylase; Validated | 94.47 | |
| PRK13004 | 399 | peptidase; Reviewed | 94.12 | |
| PRK08596 | 421 | acetylornithine deacetylase; Validated | 94.09 | |
| PRK08737 | 364 | acetylornithine deacetylase; Provisional | 94.07 | |
| PRK15026 | 485 | aminoacyl-histidine dipeptidase; Provisional | 93.99 | |
| PRK08588 | 377 | succinyl-diaminopimelate desuccinylase; Reviewed | 93.88 | |
| PRK09133 | 472 | hypothetical protein; Provisional | 93.71 | |
| TIGR03176 | 406 | AllC allantoate amidohydrolase. This enzyme cataly | 93.43 | |
| PRK07318 | 466 | dipeptidase PepV; Reviewed | 93.37 | |
| PRK12893 | 412 | allantoate amidohydrolase; Reviewed | 93.35 | |
| PRK12892 | 412 | allantoate amidohydrolase; Reviewed | 92.86 | |
| TIGR01879 | 401 | hydantase amidase, hydantoinase/carbamoylase famil | 92.13 | |
| TIGR01910 | 375 | DapE-ArgE acetylornithine deacetylase or succinyl- | 92.06 | |
| PRK13799 | 591 | unknown domain/N-carbamoyl-L-amino acid hydrolase | 92.06 | |
| TIGR03320 | 395 | ygeY M20/DapE family protein YgeY. Members of this | 92.04 | |
| PRK13013 | 427 | succinyl-diaminopimelate desuccinylase; Reviewed | 91.98 | |
| PRK07906 | 426 | hypothetical protein; Provisional | 91.91 | |
| PRK06446 | 436 | hypothetical protein; Provisional | 91.72 | |
| PRK07079 | 469 | hypothetical protein; Provisional | 91.03 | |
| TIGR03526 | 395 | selenium_YgeY putative selenium metabolism hydrola | 91.0 | |
| PRK07522 | 385 | acetylornithine deacetylase; Provisional | 90.51 | |
| PRK09104 | 464 | hypothetical protein; Validated | 90.01 | |
| PRK05111 | 383 | acetylornithine deacetylase; Provisional | 89.67 | |
| PRK13590 | 591 | putative bifunctional OHCU decarboxylase/allantoat | 89.23 | |
| COG0624 | 409 | ArgE Acetylornithine deacetylase/Succinyl-diaminop | 89.03 | |
| PRK15026 | 485 | aminoacyl-histidine dipeptidase; Provisional | 88.71 | |
| PRK06133 | 410 | glutamate carboxypeptidase; Reviewed | 88.16 | |
| PRK08201 | 456 | hypothetical protein; Provisional | 87.18 | |
| PRK13007 | 352 | succinyl-diaminopimelate desuccinylase; Reviewed | 86.96 | |
| TIGR01886 | 466 | dipeptidase dipeptidase PepV. This model represent | 86.22 | |
| TIGR01892 | 364 | AcOrn-deacetyl acetylornithine deacetylase (ArgE). | 85.26 | |
| COG2234 | 435 | Iap Predicted aminopeptidases [General function pr | 85.21 | |
| PRK08651 | 394 | succinyl-diaminopimelate desuccinylase; Reviewed | 84.99 | |
| TIGR01892 | 364 | AcOrn-deacetyl acetylornithine deacetylase (ArgE). | 83.51 | |
| PRK07205 | 444 | hypothetical protein; Provisional | 83.46 | |
| PRK07907 | 449 | hypothetical protein; Provisional | 83.05 | |
| PRK06156 | 520 | hypothetical protein; Provisional | 82.72 | |
| TIGR01910 | 375 | DapE-ArgE acetylornithine deacetylase or succinyl- | 81.92 | |
| PRK08652 | 347 | acetylornithine deacetylase; Provisional | 81.61 | |
| PRK13381 | 404 | peptidase T; Provisional | 81.38 | |
| PRK07522 | 385 | acetylornithine deacetylase; Provisional | 81.2 | |
| KOG2195 | 702 | consensus Transferrin receptor and related protein | 80.44 |
| >KOG2596 consensus Aminopeptidase I zinc metalloprotease (M18) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-111 Score=844.26 Aligned_cols=412 Identities=58% Similarity=0.933 Sum_probs=383.4
Q ss_pred ccccchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCcccccCCcccccCCCeEEEEeCCcEEEEEEeCCcCcc----
Q 012182 52 AQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSV---- 127 (469)
Q Consensus 52 ~~~~~~~~~a~~~~~FL~~spT~~hav~~~~~~L~~~GF~~L~e~~~W~l~~g~kyf~~r~~s~iiAf~vG~~~~~---- 127 (469)
+.++...++|++|++||++||||||||++++++|.++||++|.|++.|+++||+|||+|||+++|+||.||++|.|
T Consensus 9 ~~k~~~~s~a~efl~fln~spTpfHav~e~k~~Ll~agF~~LsE~~~W~iepg~kyf~tRN~S~iiAFavG~ky~pgnGf 88 (479)
T KOG2596|consen 9 PSKECKSSAAQEFLDFLNKSPTPFHAVQEFKERLLKAGFKELSEKSDWQIEPGGKYFVTRNGSSIIAFAVGGKYVPGNGF 88 (479)
T ss_pred CCchhhHHHHHHHHHHHhcCCCchHHHHHHHHHHHHccchhcccccCcccCCCceEEEEccCceEEEEeccCcccCCCce
Confidence 3344456689999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -------------------------------------------------cEEEEEc-CCCcEEEEEeeeCCCeEeecccc
Q 012182 128 -------------------------------------------------GRVIVRG-SDGSFLHKLVKVKRPLLRVPTLA 157 (469)
Q Consensus 128 -------------------------------------------------GrV~~k~-~~g~~~~~lv~~~~Pv~~Ip~La 157 (469)
|||++|+ ++|+++++||++++||++||+||
T Consensus 89 ~iigaHtDSpcLrlKP~Sk~s~~gylqVgV~tYGGgiw~tWfDRDLsvaGRvivk~~~~~~~~~~LV~v~rPllrIPtLA 168 (479)
T KOG2596|consen 89 SIIGAHTDSPCLRLKPVSKRSAEGYLQVGVETYGGGIWHTWFDRDLSVAGRVIVKEAGDGKLIHRLVDVKRPLLRIPTLA 168 (479)
T ss_pred eEEEecCCCcceeecccccccccceEEEEEeecCCccchhhccccccccceEEEEecCCcceeeeeecCCCceeecccee
Confidence 9999996 47899999999999999999999
Q ss_pred cccccccccCCCCCCccccccceeeccCccccC---CccccCC--CCCCccCChhHHHHHHHHHhCCCCCceeEEEEEee
Q 012182 158 IHLDRTVNKDGFKPNLETQLIPLLATKSEETSV---EPKEKSS--TSSSKVTHHPQLMQILSQELGCGTDDIASIELNIC 232 (469)
Q Consensus 158 iHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~---~~~~~~~--~~~~~~~h~~~ll~~la~~~gV~~gDiv~~dl~l~ 232 (469)
|||+|+.| ++|++|.|++|.||+|....++++ ++.++++ ..+.+++|++.||.+||+++|++++|||++||+++
T Consensus 169 iHldr~~n-~~f~pn~EtqlvPil~t~~~~~~~~~e~~~~~~~~~~~~~~~~Hhp~Ll~liak~lg~~~edIvd~eL~l~ 247 (479)
T KOG2596|consen 169 IHLDRDVN-EGFKPNTETQLVPILGTAIPAEEEKTEKPSDDGDKPRNSSKGKHHPVLLGLIAKELGCTPEDIVDFELILY 247 (479)
T ss_pred eecCCccc-ccCCCCccceeeeeecccCchhhhcCCCCCCCCccccccccccccHHHHHHHHHHhCCCHHHhhheeeeee
Confidence 99999999 889999999999999987653221 1111222 25667899999999999999999999999999999
Q ss_pred ecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHHHH
Q 012182 233 DTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRI 312 (469)
Q Consensus 233 d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ri 312 (469)
|+||++++|+++|||+++|||||.|||+++.||+.+... .++++.+.+.++++||||||||.++|||.|.|++++|+||
T Consensus 248 Dtq~a~lgG~~~eFiFs~RLDnl~~sF~al~aLi~s~~~-~~l~~e~~ir~valfDnEEvGS~SaQGA~s~~l~~vl~Ri 326 (479)
T KOG2596|consen 248 DTQKATLGGANDEFIFSPRLDNLLSSFCALQALIDSAEG-ESLENESGIRMVALFDNEEVGSDSAQGAGSPFLESVLRRI 326 (479)
T ss_pred cCCchhhcCcccceeecccccchhhHHHHHHHHHHHhcC-CCcccCCCeEEEEeccchhhcchhhccCCCccHHHHHHHH
Confidence 999999999999999999999999999999999988654 3566677889999999999999999999999999999999
Q ss_pred HhcccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHCC
Q 012182 313 VGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHN 392 (469)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~ 392 (469)
..+++. .+..|.+++++||+||+||+||+||||+++|+.+|+|.|++|||||+|+||||+||....+.++++|++++
T Consensus 327 ss~~~~---~~~~~~~ai~kSflvSADmaHa~hPNy~~kheenH~P~~h~G~vik~naNqryaTn~v~~~l~kevA~~~~ 403 (479)
T KOG2596|consen 327 SSLFGS---FPTAFEEAIAKSFLVSADMAHAVHPNYSDKHEENHRPLLHGGPVIKVNANQRYATNSVGSALVKEVAELAK 403 (479)
T ss_pred HHhcCC---CchHHHHHhhhheeeehhhhhhcCCCchhhhhhccCCccCCCceEEEcCCcceeccchhHHHHHHHHHHcC
Confidence 998864 57789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEeEEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhccccccccccc
Q 012182 393 LPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD 468 (469)
Q Consensus 393 Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~~~~~~~~~~~ 468 (469)
+|+|.|++|||++||||||||+++++||+|+|+|+|+|+|||+||||+.+|++.+++++++||++|..++.++.+|
T Consensus 404 vplQ~fvVrNdspcGsTIGPiLAS~~G~RTlDlG~pqLsMHSiRe~~gs~dv~~~~~lFk~Ff~~f~sv~~~~~vd 479 (479)
T KOG2596|consen 404 VPLQDFVVRNDSPCGSTIGPILASKTGIRTLDLGIPQLSMHSIREMCGSKDVEQAVKLFKGFFERFSSVESKLVVD 479 (479)
T ss_pred CCceeEEEecCCCCccccchhhhhhcCceeeecCchhhhhHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHhhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998876
|
|
| >PTZ00371 aspartyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF02127 Peptidase_M18: Aminopeptidase I zinc metalloprotease (M18); InterPro: IPR001948 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PRK02813 putative aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
| >PRK02256 putative aminopeptidase 1; Provisional | Back alignment and domain information |
|---|
| >PRK09864 putative peptidase; Provisional | Back alignment and domain information |
|---|
| >COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03107 glu_aminopep glutamyl aminopeptidase | Back alignment and domain information |
|---|
| >PRK09961 exoaminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family | Back alignment and domain information |
|---|
| >PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >TIGR01883 PepT-like peptidase T-like protein | Back alignment and domain information |
|---|
| >PRK00466 acetyl-lysine deacetylase; Validated | Back alignment and domain information |
|---|
| >TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase | Back alignment and domain information |
|---|
| >PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK13381 peptidase T; Provisional | Back alignment and domain information |
|---|
| >PRK05469 peptidase T; Provisional | Back alignment and domain information |
|---|
| >PRK08554 peptidase; Reviewed | Back alignment and domain information |
|---|
| >PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PRK12891 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >PRK07473 carboxypeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK07338 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK08652 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade | Back alignment and domain information |
|---|
| >TIGR01882 peptidase-T peptidase T | Back alignment and domain information |
|---|
| >PRK06837 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase | Back alignment and domain information |
|---|
| >PRK13983 diaminopimelate aminotransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase | Back alignment and domain information |
|---|
| >PRK12890 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >PRK09290 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >PRK04443 acetyl-lysine deacetylase; Provisional | Back alignment and domain information |
|---|
| >COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK06915 acetylornithine deacetylase; Validated | Back alignment and domain information |
|---|
| >PRK13004 peptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK08596 acetylornithine deacetylase; Validated | Back alignment and domain information |
|---|
| >PRK08737 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK15026 aminoacyl-histidine dipeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK09133 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03176 AllC allantoate amidohydrolase | Back alignment and domain information |
|---|
| >PRK07318 dipeptidase PepV; Reviewed | Back alignment and domain information |
|---|
| >PRK12893 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >PRK12892 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >TIGR01879 hydantase amidase, hydantoinase/carbamoylase family | Back alignment and domain information |
|---|
| >TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase | Back alignment and domain information |
|---|
| >PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03320 ygeY M20/DapE family protein YgeY | Back alignment and domain information |
|---|
| >PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK07906 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06446 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK07079 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03526 selenium_YgeY putative selenium metabolism hydrolase | Back alignment and domain information |
|---|
| >PRK07522 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK09104 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK05111 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional | Back alignment and domain information |
|---|
| >COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK15026 aminoacyl-histidine dipeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK06133 glutamate carboxypeptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK08201 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >TIGR01886 dipeptidase dipeptidase PepV | Back alignment and domain information |
|---|
| >TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) | Back alignment and domain information |
|---|
| >COG2234 Iap Predicted aminopeptidases [General function prediction only] | Back alignment and domain information |
|---|
| >PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) | Back alignment and domain information |
|---|
| >PRK07205 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK07907 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06156 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase | Back alignment and domain information |
|---|
| >PRK08652 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK13381 peptidase T; Provisional | Back alignment and domain information |
|---|
| >PRK07522 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 469 | ||||
| 3var_A | 496 | Crystal Structure Of Dnpep, Znzn Form Length = 496 | 4e-96 | ||
| 4dyo_A | 485 | Crystal Structure Of Human Aspartyl Aminopeptidase | 3e-95 | ||
| 2ijz_A | 428 | Crystal Structure Of Aminopeptidase Length = 428 | 5e-55 | ||
| 4eme_A | 571 | X-Ray Crystal Structure And Specificity Of The Plas | 6e-37 | ||
| 2glf_A | 450 | Crystal Structure Of Aminipeptidase (m18 Family) Fr | 3e-14 | ||
| 1y7e_A | 458 | The Crystal Structure Of Aminopeptidase I From Borr | 2e-12 | ||
| 2glj_A | 461 | Crystal Structure Of Aminopeptidase I From Clostrid | 5e-11 |
| >pdb|3VAR|A Chain A, Crystal Structure Of Dnpep, Znzn Form Length = 496 | Back alignment and structure |
|
| >pdb|4DYO|A Chain A, Crystal Structure Of Human Aspartyl Aminopeptidase (Dnpep) In Complex With Aspartic Acid Hydroxamate Length = 485 | Back alignment and structure |
| >pdb|2IJZ|A Chain A, Crystal Structure Of Aminopeptidase Length = 428 | Back alignment and structure |
| >pdb|4EME|A Chain A, X-Ray Crystal Structure And Specificity Of The Plasmodium Falciparum Malaria Aminopeptidase Length = 571 | Back alignment and structure |
| >pdb|2GLF|A Chain A, Crystal Structure Of Aminipeptidase (m18 Family) From Thermotoga Maritima Length = 450 | Back alignment and structure |
| >pdb|1Y7E|A Chain A, The Crystal Structure Of Aminopeptidase I From Borrelia Burgdorferi B31 Length = 458 | Back alignment and structure |
| >pdb|2GLJ|A Chain A, Crystal Structure Of Aminopeptidase I From Clostridium Acetobutylicum Length = 461 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* Length = 496 | Back alignment and structure |
|---|
Score = 508 bits (1310), Expect = e-178
Identities = 200/495 (40%), Positives = 277/495 (55%), Gaps = 60/495 (12%)
Query: 29 HHSFPSSNRYRPRTLHNFSTSGIAQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDA 88
HH + L+ G A+ + + +LL ++N S +PFHA AE + L+ A
Sbjct: 7 HHHHHDYDIPTTENLYFQGAMGRARKEAVQAAARELLKFVNRSPSPFHAVAECRSRLLQA 66
Query: 89 GFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVG-------------------- 128
GF L E + W++KP YF TRN S ++AFAVG +Y G
Sbjct: 67 GFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRR 126
Query: 129 ---------------------------------RVIVR-GSDGSFLHKLVKVKRPLLRVP 154
RVIV+ + G +LV V RP+LR+P
Sbjct: 127 SRRSQVGFQQVGVETYGGGIWSTWFDRDLTLAGRVIVKCPTSGRLEQRLVHVDRPILRIP 186
Query: 155 TLAIHLDRTVNKDGFKPNLETQLIPLLAT-KSEETSVEPKEKSSTSSSKVTHHPQLMQIL 213
LAIHL R VN+ F PN+E L+P+LAT EE E +++ HH L +L
Sbjct: 187 HLAIHLQRNVNE-NFGPNMEMHLVPILATSIQEELEKGTPEPGPLNATDERHHSVLTSLL 245
Query: 214 SQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPS 273
LG +DI +EL + DTQP+ LGGA EFIF+ RLDNL S +C L+ALIDSC +P+
Sbjct: 246 CAHLGLSPEDILEMELCLADTQPAVLGGAYEEFIFAPRLDNLHSCFCALQALIDSCSAPA 305
Query: 274 NLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQS 333
+L+++ +RM+AL+DNEEVGS+S QGA + +RRI S T+FE I +S
Sbjct: 306 SLAADPHVRMIALYDNEEVGSESAQGAQSLLTELVLRRISASPQ----HLTAFEEAIPKS 361
Query: 334 FLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNL 393
+++SADMAH VHPN+ +KHEE+HRP KG VIK N+ QRYA++ V+ L +E+A +
Sbjct: 362 YMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGV 421
Query: 394 PTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKA 453
P Q+ +VRND CG+TIGPILAS +G+R +D G QL+MHS+RE T + FK
Sbjct: 422 PLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQLAMHSIRETACTTGVLQTITLFKG 481
Query: 454 FYESFSSIDKKLIVD 468
F+E F S+ + L+VD
Sbjct: 482 FFELFPSLSRSLLVD 496
|
| >2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Length = 428 | Back alignment and structure |
|---|
| >2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Length = 450 | Back alignment and structure |
|---|
| >1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Length = 458 | Back alignment and structure |
|---|
| >2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Length = 461 | Back alignment and structure |
|---|
| >2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Length = 461 | Back alignment and structure |
|---|
| >4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Length = 571 | Back alignment and structure |
|---|
| >4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Length = 571 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Length = 348 | Back alignment and structure |
|---|
| >3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Length = 343 | Back alignment and structure |
|---|
| >1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Length = 353 | Back alignment and structure |
|---|
| >3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Length = 355 | Back alignment and structure |
|---|
| >1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Length = 373 | Back alignment and structure |
|---|
| >2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Length = 340 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 469 | |||
| 3vat_A | 496 | Dnpep, aspartyl aminopeptidase; alpha-beta-alpha s | 100.0 | |
| 4eme_A | 571 | M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid | 100.0 | |
| 2glf_A | 450 | Probable M18-family aminopeptidase 1; putative, NY | 100.0 | |
| 2glj_A | 461 | Probable M18-family aminopeptidase 1; aminopeptida | 100.0 | |
| 1y7e_A | 458 | Probable M18-family aminopeptidase 1; aminopeptida | 100.0 | |
| 2ijz_A | 428 | Probable M18-family aminopeptidase 2; putative ami | 100.0 | |
| 2vpu_A | 354 | TET3, 354AA long hypothetical operon protein FRV; | 100.0 | |
| 3kl9_A | 355 | PEPA, glutamyl aminopeptidase; tetrahedral aminope | 100.0 | |
| 3isx_A | 343 | Endoglucanase; TM1050, structural genomics, joint | 100.0 | |
| 1ylo_A | 348 | Hypothetical protein SF2450; structural genomics, | 100.0 | |
| 1vho_A | 346 | Endoglucanase; structural genomics, unknown functi | 100.0 | |
| 1y0y_A | 353 | FRV operon protein FRVX; aminopeptidase, PDZ, hydr | 100.0 | |
| 2gre_A | 349 | Deblocking aminopeptidase; structural genomi prote | 100.0 | |
| 1vhe_A | 373 | Aminopeptidase/glucanase homolog; structural genom | 99.97 | |
| 2fvg_A | 340 | Endoglucanase; TM1049, structural genomics, joint | 99.96 | |
| 2wyr_A | 332 | Cobalt-activated peptidase TET1; hydrolase, large | 99.96 | |
| 3cpx_A | 321 | Aminopeptidase, M42 family; YP_676701.1, putative | 99.96 | |
| 2wzn_A | 354 | TET3, 354AA long hypothetical operon protein FRV; | 99.68 | |
| 4h2k_A | 269 | Succinyl-diaminopimelate desuccinylase; DAPE, MCSG | 99.59 | |
| 3t68_A | 268 | Succinyl-diaminopimelate desuccinylase; DAPE, csgi | 99.49 | |
| 1rtq_A | 299 | Bacterial leucyl aminopeptidase; bimetallic, zinc, | 99.2 | |
| 1tkj_A | 284 | Aminopeptidase, SGAP; double-zinc metalloproteinas | 99.14 | |
| 1fno_A | 417 | Peptidase T; metallo peptidase, protease, hydrolas | 98.95 | |
| 3gb0_A | 373 | Peptidase T; NP_980509.1, aminopeptidase PEPT, pep | 98.74 | |
| 2ek8_A | 421 | Aminopeptidase; metalloproteinase, hydrolase; 1.80 | 98.73 | |
| 3rza_A | 396 | Tripeptidase; phosphorylase/hydrolase-like, struct | 98.71 | |
| 1cg2_A | 393 | Carboxypeptidase G2; metallocarboxypeptidase, hydr | 98.24 | |
| 3tx8_A | 369 | Succinyl-diaminopimelate desuccinylase; peptidase, | 98.11 | |
| 3iib_A | 444 | Peptidase M28; YP_926796.1, structural genomics, J | 97.99 | |
| 3pfo_A | 433 | Putative acetylornithine deacetylase; metal bindin | 97.99 | |
| 3ife_A | 434 | Peptidase T; metallopeptidase, aminopeptidase, hyd | 97.98 | |
| 3mru_A | 490 | Aminoacyl-histidine dipeptidase; metalloprotease, | 97.75 | |
| 3isz_A | 377 | Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b | 97.66 | |
| 3tc8_A | 309 | Leucine aminopeptidase; phosphorylase/hydrolase-li | 97.65 | |
| 2qyv_A | 487 | XAA-His dipeptidase; YP_718209.1, structural genom | 97.51 | |
| 1q7l_B | 88 | Aminoacylase-1; catalysis, enzyme dimerization, si | 97.47 | |
| 3gux_A | 314 | Putative Zn-dependent exopeptidase; aminopeptidase | 96.82 | |
| 3n5f_A | 408 | L-carbamoylase, N-carbamoyl-L-amino acid hydrolase | 96.71 | |
| 4fuu_A | 309 | Leucine aminopeptidase; phosphorylase/hydrolase li | 96.63 | |
| 1z2l_A | 423 | Allantoate amidohydrolase; ALLC, purine cataboli a | 96.5 | |
| 4fai_A | 330 | CG5976, isoform B; alpha/beta hydrolase, PGlu form | 96.05 | |
| 1q7l_A | 198 | Aminoacylase-1; catalysis, enzyme dimerization, si | 95.97 | |
| 3pb6_X | 330 | Glutaminyl-peptide cyclotransferase-like protein; | 95.83 | |
| 4f9u_A | 312 | CG32412; alpha/beta hydrolase, PGlu formation, PE, | 95.55 | |
| 2afw_A | 329 | Glutaminyl-peptide cyclotransferase; alpha-beta pr | 95.37 | |
| 3fed_A | 707 | Glutamate carboxypeptidase III; metallopeptidase, | 95.08 | |
| 1vgy_A | 393 | Succinyl-diaminopimelate desuccinylase; structural | 95.08 | |
| 2v8h_A | 474 | Beta-alanine synthase; amidohydrolase, alpha and b | 94.97 | |
| 3kas_A | 640 | Transferrin receptor protein 1; transferrin recept | 94.07 | |
| 3ct9_A | 356 | Acetylornithine deacetylase; NP_812461.1, A putati | 92.92 | |
| 2f7v_A | 369 | Aectylcitrulline deacetylase; alpha/beta, hydrolas | 92.15 | |
| 2pok_A | 481 | Peptidase, M20/M25/M40 family; M20 family peptidas | 91.79 | |
| 2zog_A | 479 | Cytosolic non-specific dipeptidase; metallopeptida | 91.43 | |
| 2pok_A | 481 | Peptidase, M20/M25/M40 family; M20 family peptidas | 90.54 | |
| 2rb7_A | 364 | Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat | 89.98 | |
| 3pfe_A | 472 | Succinyl-diaminopimelate desuccinylase; metal bind | 89.71 | |
| 3khx_A | 492 | Putative dipeptidase sacol1801; DAPE, metallopepti | 89.6 | |
| 2zog_A | 479 | Cytosolic non-specific dipeptidase; metallopeptida | 87.6 | |
| 1ysj_A | 404 | Protein YXEP; M20 family peptidase, dinuclear meta | 86.74 | |
| 3khx_A | 492 | Putative dipeptidase sacol1801; DAPE, metallopepti | 85.58 | |
| 1lfw_A | 470 | PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac | 85.52 | |
| 1xmb_A | 418 | IAA-amino acid hydrolase homolog 2; structural gen | 85.49 | |
| 1lfw_A | 470 | PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac | 85.38 | |
| 3pfe_A | 472 | Succinyl-diaminopimelate desuccinylase; metal bind | 84.13 | |
| 3dlj_A | 485 | Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti | 83.59 | |
| 3dlj_A | 485 | Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti | 83.52 | |
| 2rb7_A | 364 | Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat | 81.84 |
| >3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-106 Score=849.37 Aligned_cols=412 Identities=47% Similarity=0.800 Sum_probs=367.9
Q ss_pred ccccchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCcccccCCcccccCCCeEEEEeCCcEEEEEEeCCcCcc----
Q 012182 52 AQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSV---- 127 (469)
Q Consensus 52 ~~~~~~~~~a~~~~~FL~~spT~~hav~~~~~~L~~~GF~~L~e~~~W~l~~g~kyf~~r~~s~iiAf~vG~~~~~---- 127 (469)
.+++++++++++|++||++||||||||++++++|+++||++|+|+++|+++||+|||++||+++||||.+|+++.+
T Consensus 30 ~~~~~~~~~a~~~~~Fl~~spT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~ 109 (496)
T 3vat_A 30 ARKEAVQAAARELLKFVNRSPSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGF 109 (496)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCE
T ss_pred hHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCe
Confidence 4445667899999999999999999999999999999999999999999999999999999999999999987532
Q ss_pred -------------------------------------------------cEEEEEc-CCCcEEEEEeeeCCCeEeecccc
Q 012182 128 -------------------------------------------------GRVIVRG-SDGSFLHKLVKVKRPLLRVPTLA 157 (469)
Q Consensus 128 -------------------------------------------------GrV~~k~-~~g~~~~~lv~~~~Pv~~Ip~La 157 (469)
|||++|+ ++|+++++||++++||++||+||
T Consensus 110 ~ivgaHtDSP~lklKp~p~~~~~g~~~l~ve~YGG~l~~tW~DR~L~laGrV~vk~~~~g~~~~~Lv~~~~Pi~~IP~La 189 (496)
T 3vat_A 110 SLIGAHTDSPCLRVKRRSRRSQVGFQQVGVETYGGGIWSTWFDRDLTLAGRVIVKCPTSGRLEQRLVHVDRPILRIPHLA 189 (496)
T ss_dssp EEEEEECCCCEEEEEEEEEEEETTEEEEEEEEESSCCGGGGTTCCEEEEEEEEEECTTTCCEEEEEEECCSCCBBCCCCC
T ss_pred EEEEEeccCCCccccCCccccCCCeeEEccEeCCCchhceecCCchhcceEEEEEecCCCeEEEEEEeCCCCeEECCccc
Confidence 9999995 56899999999999999999999
Q ss_pred cccccccccCCCCCCccccccceeeccCccccCC-ccccCCCCCCccCChhHHHHHHHHHhCCCCCceeEEEEEeeecCC
Q 012182 158 IHLDRTVNKDGFKPNLETQLIPLLATKSEETSVE-PKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQP 236 (469)
Q Consensus 158 iHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~~-~~~~~~~~~~~~~h~~~ll~~la~~~gV~~gDiv~~dl~l~d~~~ 236 (469)
|||+|++| ++|++|+|+||+||+|....++.++ ..++++.+..+++|+..||++|++++||++||+++||++++|+||
T Consensus 190 iHl~r~~n-~~~~~n~q~~l~pi~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~la~~~gv~~~Div~~dl~l~d~~~ 268 (496)
T 3vat_A 190 IHLQRNVN-ENFGPNMEMHLVPILATSIQEELEKGTPEPGPLNATDERHHSVLTSLLCAHLGLSPEDILEMELCLADTQP 268 (496)
T ss_dssp GGGSTTTT-TCCCCCTTTTTCCEEEEHHHHHHHCC-----------CCSCHHHHHHHHHHHTCCGGGEEEEEEEEEECSC
T ss_pred cccCcchh-cccCcCcccccccEEEeccccccccccccccccccccccccHHHHHHHHHHcCCCcCceEEEEEEEEecCc
Confidence 99999998 8899999999999999753211000 000011111256889999999999999999999999999999999
Q ss_pred ccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCcchHHHHHHHHhcc
Q 012182 237 SCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSL 316 (469)
Q Consensus 237 ~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~v~~dqEEVGsrga~gA~s~~~~dil~ri~~~~ 316 (469)
++++|++++||+|+|||||+|||++++||+++++.+..+.....+.++++||||||||+|++||++.|+||+|+||..+.
T Consensus 269 ~~~~Gl~~e~I~s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~ 348 (496)
T 3vat_A 269 AVLGGAYEEFIFAPRLDNLHSCFCALQALIDSCSAPASLAADPHVRMIALYDNEEVGSESAQGAQSLLTELVLRRISASP 348 (496)
T ss_dssp CEEETTTTCEEEETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEEEEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCS
T ss_pred ceEeccCCceEEeeccccHHHHHHHHHHHHhhhccccccccCCCcEEEEEEccCCcCCCcchhccccccHHHHHHHHhcc
Confidence 99999999999999999999999999999988531000000134677999999999999999999999999999999774
Q ss_pred cccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcCCCCceEEEcCCCCcccCHHHHHHHHHHHHHCCCCEe
Q 012182 317 AHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQ 396 (469)
Q Consensus 317 ~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q 396 (469)
+ +.+.+++++++|++||+||+||.||||+++++++|.+.||+||+||++++++|+||+.+.++++++|+++|||||
T Consensus 349 ~----~~~~~~~~l~~S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q 424 (496)
T 3vat_A 349 Q----HLTAFEEAIPKSYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQ 424 (496)
T ss_dssp S----CTTHHHHHGGGCEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCE
T ss_pred C----chHHHHHHhhcCeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEE
Confidence 2 678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCChHHHHhcCCCCcEEEechhhccccchhhhcCHHHHHHHHHHHHHHHhhccccccccccc
Q 012182 397 EFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD 468 (469)
Q Consensus 397 ~~v~r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS~~E~~~~~Dv~~~~~ll~af~~~~~~~~~~~~~~ 468 (469)
.++.|+|++||||+|+|++++.||||+|||+|+||||||+||++++|++++++|+++||+++.+++.++.+|
T Consensus 425 ~~v~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~ryMHS~~E~~~~~D~~~~v~Ll~af~~~~~~~~~~~~~~ 496 (496)
T 3vat_A 425 DLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQLAMHSIRETACTTGVLQTITLFKGFFELFPSLSRSLLVD 496 (496)
T ss_dssp EECCCTTSCCCCCHHHHHHHHHTCEEEEEECEEESTTSSSEEEESHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred EEEecCCCCCcchHHHHHhcccCCcEEEecHhhhccccHHHHhhHHHHHHHHHHHHHHHHhHHHHhhhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999888775
|
| >4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
| >2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} | Back alignment and structure |
|---|
| >2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
| >1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A | Back alignment and structure |
|---|
| >2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A | Back alignment and structure |
|---|
| >3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
| >2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A | Back alignment and structure |
|---|
| >4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} | Back alignment and structure |
|---|
| >3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A | Back alignment and structure |
|---|
| >1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... | Back alignment and structure |
|---|
| >1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A | Back alignment and structure |
|---|
| >1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A | Back alignment and structure |
|---|
| >3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} | Back alignment and structure |
|---|
| >2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* | Back alignment and structure |
|---|
| >3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
| >1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
| >3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} | Back alignment and structure |
|---|
| >3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
| >3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} | Back alignment and structure |
|---|
| >3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} | Back alignment and structure |
|---|
| >3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A | Back alignment and structure |
|---|
| >3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
| >1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 | Back alignment and structure |
|---|
| >3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
| >3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} | Back alignment and structure |
|---|
| >4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A | Back alignment and structure |
|---|
| >4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* | Back alignment and structure |
|---|
| >1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 | Back alignment and structure |
|---|
| >3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* | Back alignment and structure |
|---|
| >4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* | Back alignment and structure |
|---|
| >2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... | Back alignment and structure |
|---|
| >3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... | Back alignment and structure |
|---|
| >1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A | Back alignment and structure |
|---|
| >3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A | Back alignment and structure |
|---|
| >3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A | Back alignment and structure |
|---|
| >2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* | Back alignment and structure |
|---|
| >2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} | Back alignment and structure |
|---|
| >3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
| >3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A | Back alignment and structure |
|---|
| >2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* | Back alignment and structure |
|---|
| >1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A | Back alignment and structure |
|---|
| >1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A | Back alignment and structure |
|---|
| >1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
| >3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} | Back alignment and structure |
|---|
| >3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} | Back alignment and structure |
|---|
| >2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 469 | ||||
| d1y7ea2 | 322 | c.56.5.4 (A:4-100,A:234-458) Probable aminopeptida | 3e-77 | |
| d1y7ea2 | 322 | c.56.5.4 (A:4-100,A:234-458) Probable aminopeptida | 7e-19 | |
| d1y0ya2 | 255 | c.56.5.4 (A:164-351,A:6-72) Frv operon protein Frv | 6e-31 | |
| d1y7ea1 | 133 | b.49.3.1 (A:101-233) Probable aminopeptidase ApeA | 2e-17 | |
| d1yloa2 | 264 | c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {S | 4e-15 | |
| d2fvga2 | 255 | c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 { | 3e-10 | |
| d1vhoa2 | 248 | c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase | 5e-08 | |
| d2grea2 | 233 | c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid | 8e-08 | |
| d1vhea2 | 275 | c.56.5.4 (A:3-72,A:163-367) Hypothetical protein Y | 5e-07 |
| >d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: Zn-dependent exopeptidases family: Bacterial dinuclear zinc exopeptidases domain: Probable aminopeptidase ApeA species: Borrelia burgdorferi [TaxId: 139]
Score = 242 bits (618), Expect = 3e-77
Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 13/230 (5%)
Query: 233 DTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEV 292
+ G + I + D+ + L ++ D +P+ + L D EE+
Sbjct: 99 PAGTAKDVGFDKALIGAYGQDDKICVFTSLESIFDLEETPN------KTAICFLVDKEEI 152
Query: 293 GSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKH 352
GS G + + + ++ + + + + S +SAD+ ++P FS H
Sbjct: 153 GSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLHVQKALWNSKSISADVCAAINPLFSSVH 212
Query: 353 EEHHRPEMQKGLVI-KHNANQRYATS----GVTAFLFKEIAKLHNLPTQEFVV-RNDMGC 406
+E + P++ G+ I K+ + + + +++ +N+ Q + + + G
Sbjct: 213 DEQNAPQLGYGIPIMKYTGHGGKSMASDADAELVSYIRQLLNKNNIAWQVATLGKVEEGG 272
Query: 407 GSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYE 456
G T+ LA GIRT+D G A +SMHS EI D+ AY +KAFY
Sbjct: 273 GGTVAKFLAG-YGIRTIDMGPAVISMHSPMEITSKFDLYNAYLAYKAFYR 321
|
| >d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Length = 322 | Back information, alignment and structure |
|---|
| >d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Length = 255 | Back information, alignment and structure |
|---|
| >d1y7ea1 b.49.3.1 (A:101-233) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Length = 133 | Back information, alignment and structure |
|---|
| >d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Length = 264 | Back information, alignment and structure |
|---|
| >d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Length = 255 | Back information, alignment and structure |
|---|
| >d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 248 | Back information, alignment and structure |
|---|
| >d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 | Back information, alignment and structure |
|---|
| >d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Length = 275 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 469 | |||
| d1y7ea2 | 322 | Probable aminopeptidase ApeA {Borrelia burgdorferi | 100.0 | |
| d1y0ya2 | 255 | Frv operon protein FrvX, catalytic domain {Pyrococ | 100.0 | |
| d1yloa2 | 264 | Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 | 99.95 | |
| d2grea2 | 233 | Deblocking aminopeptidase YhfE {Bacillus cereus [T | 99.94 | |
| d1vhoa2 | 248 | Putative endoglucanase TM1048, catalytic domain {T | 99.92 | |
| d2fvga2 | 255 | Endoglucanase TM1049 {Thermotoga maritima [TaxId: | 99.92 | |
| d1vhea2 | 275 | Hypothetical protein YsdC, catalytic domain {Bacil | 99.87 | |
| d1fnoa4 | 295 | Peptidase T (tripeptidase), catalytic domain {Salm | 99.67 | |
| d1y7ea1 | 133 | Probable aminopeptidase ApeA {Borrelia burgdorferi | 99.64 | |
| d2grea1 | 113 | Deblocking aminopeptidase YhfE {Bacillus cereus [T | 98.3 | |
| d1z2la1 | 293 | Allantoate amidohydrolase AllC catalytic domain {E | 97.74 | |
| d1cg2a1 | 276 | Carboxypeptidase G2, catalytic domain {Pseudomonas | 97.49 | |
| d1y0ya1 | 91 | Frv operon protein FrvX {Pyrococcus horikoshii [Ta | 97.23 | |
| d1rtqa_ | 291 | Aminopeptidase {Aeromonas proteolytica [TaxId: 671 | 97.22 | |
| d1tkja1 | 277 | Aminopeptidase {Streptomyces griseus [TaxId: 1911] | 97.18 | |
| g1q7l.1 | 280 | Aminoacylase-1, catalytic domain {Human (Homo sapi | 96.88 | |
| d1vhea1 | 90 | Hypothetical protein YsdC {Bacillus subtilis [TaxI | 96.79 | |
| d1lfwa1 | 272 | Aminopeptidase PepV {Lactobacillus delbrueckii [Ta | 95.81 | |
| d2fvga1 | 84 | Endoglucanase TM1049 {Thermotoga maritima [TaxId: | 95.19 | |
| d2afwa1 | 329 | Glutaminyl-peptide cyclotransferase, QPCT {Human ( | 95.18 | |
| d1vhoa1 | 83 | Putative endoglucanase TM1048 {Thermotoga maritima | 94.8 | |
| d1r3na1 | 322 | Peptidase-like beta-alanine synthase, catalytic do | 94.54 | |
| d1de4c3 | 294 | Transferrin receptor ectodomain, protease-like dom | 93.71 | |
| d1yloa1 | 81 | Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 | 92.83 | |
| d3bi1a3 | 304 | Glutamate carboxypeptidase II FOLH1 {Human (Homo s | 91.56 |
| >d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: Zn-dependent exopeptidases family: Bacterial dinuclear zinc exopeptidases domain: Probable aminopeptidase ApeA species: Borrelia burgdorferi [TaxId: 139]
Probab=100.00 E-value=1e-79 Score=618.57 Aligned_cols=316 Identities=22% Similarity=0.273 Sum_probs=251.5
Q ss_pred CCCCCccccccccccchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCcccccCCcccccCCCeEEEEeCCcEEEEEE
Q 012182 41 RTLHNFSTSGIAQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFA 120 (469)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~a~~~~~FL~~spT~~hav~~~~~~L~~~GF~~L~e~~~W~l~~g~kyf~~r~~s~iiAf~ 120 (469)
++.|+ .++..++++++++|++|++||++||||||||++++++|+++||++|+|.+.| +||+|||++|++++|+||+
T Consensus 1 ~~~w~--~~~~~~~~~~~~~a~~~~~Fl~~~~T~~hav~~~~~~L~~~GF~~l~e~~~~--~~g~k~y~~~~~~sliaf~ 76 (322)
T d1y7ea2 1 QNPWI--YLNEEEKNQILNFSESYKKFISKFKTEREVTAYALDKAKKLGFINAEEKKNL--MPGDKIFYTCREKSVAFAI 76 (322)
T ss_dssp CCGGG--GCCHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTTCEESTTCCCC--CTTCEEECBCSSSCBCCEE
T ss_pred CCccc--cCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCeECCCCCcc--cCCCeEEEEeCCCEEEEEE
Confidence 57898 5666777888999999999999999999999999999999999999998888 6899999999999999999
Q ss_pred eCCcCcccEEEEEcCCCcEEEEEeeeCCCeEeecccccccccccccCCCCCCccccccceeeccCccccCCccccCCCCC
Q 012182 121 VGQKYSVGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSS 200 (469)
Q Consensus 121 vG~~~~~GrV~~k~~~g~~~~~lv~~~~Pv~~Ip~LaiHL~~~~~~~~~~~n~~~~l~piig~~~~~~~~~~~~~~~~~~ 200 (469)
+|+++.. +| +.+| +-|-+.+
T Consensus 77 iG~~~~~--------~G------------~~ii---gaHtDSP------------------------------------- 96 (322)
T d1y7ea2 77 IGKNPIE--------DG------------MNFI---VSHTDSP------------------------------------- 96 (322)
T ss_dssp CCSSCGG--------GC------------CEEC---CCBCCCC-------------------------------------
T ss_pred eCCCCcc--------CC------------eEEE---EEecCCC-------------------------------------
Confidence 9986320 11 0011 1122110
Q ss_pred CccCChhHHHHHHHHHhCCCCCceeEEEEEeeecCCccccCCCCceeeeccccchhcHHHHHHHHHHcCCCCCCCCCCCc
Q 012182 201 SKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHA 280 (469)
Q Consensus 201 ~~~~h~~~ll~~la~~~gV~~gDiv~~dl~l~d~~~~~~~Gl~~e~I~~~~lDnr~g~~~~leal~~~~~~~~~~~~~~~ 280 (469)
-+++++++++|++++||.|+|||||+|||++|+||+++.+. ++.
T Consensus 97 ------------------------------r~~a~~~~~~G~d~efi~s~rlDd~~~~~~~l~Ali~~~~~------~~~ 140 (322)
T d1y7ea2 97 ------------------------------RVPAGTAKDVGFDKALIGAYGQDDKICVFTSLESIFDLEET------PNK 140 (322)
T ss_dssp ------------------------------BEECSCCEEETTTTCEEEESSHHHHHHHHHHHHHHSSSSCC------CSS
T ss_pred ------------------------------chhhccccccccccceeeccCCccHHHHHHHHHHHHhhhcC------CCc
Confidence 03467788999999999999999999999999999877532 345
Q ss_pred eEEEEEEeccccCcccccccCCcchHHHHHHHHhcccccCCchhhhhhhccCceEEEEecCCCCCCCCCccccCCCCCcC
Q 012182 281 IRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEM 360 (469)
Q Consensus 281 ~~~~v~~dqEEVGsrga~gA~s~~~~dil~ri~~~~~~~~~~~~~~~~~~~~s~~IS~DvahA~~Pn~~~~~~~~~~~~L 360 (469)
+.++++||||||||+|++||+|.|++++|+||+.+++.+..+...+.+++++|++||+||+||+||||+++|+++|.+.|
T Consensus 141 ~~v~~~~D~EEIGS~s~~GA~s~~l~~~l~ri~~~l~~~~~~~~~~~~al~~S~~iSaDvahA~hPny~~~~d~~~~~~l 220 (322)
T d1y7ea2 141 TAICFLVDKEEIGSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLHVQKALWNSKSISADVCAAINPLFSSVHDEQNAPQL 220 (322)
T ss_dssp CEECCCBCSTTC--------CTTHHHHHHHHHHHHHSSTTCCTHHHHHHHHHCEEEECCCEECCCC-------CTTSCCT
T ss_pred eEEEEEecccccCCCccccccCccHHHHHHHHHHHhcCCCccchhHHHHHhhceeeeccccccccCCCcccccccccccc
Confidence 78899999999999999999999999999999998876444667789999999999999999999999999999999999
Q ss_pred CCCceE-EEcCCCCcc----cCHHHHHHHHHHHHHCCCCEeEEEe-ecCCCCCCChHHHHhcCCCCcEEEechhhccccc
Q 012182 361 QKGLVI-KHNANQRYA----TSGVTAFLFKEIAKLHNLPTQEFVV-RNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHS 434 (469)
Q Consensus 361 G~GpvI-k~~~~~~y~----t~~~~~~~l~~ia~~~~Ip~Q~~v~-r~D~~gGgTig~i~~s~~Gi~tidIGiP~r~MHS 434 (469)
|+||+| |++.+++|. +++.+.++++++|+++|||||.+++ |+|.+||||+|+|++. .||||+|||+|+|||||
T Consensus 221 g~G~~i~k~~~~~~~~~~~~a~~~~~~~~~~ia~~~~Ip~Q~~~v~r~d~~gGsTig~i~a~-~Gi~tvdiGiP~l~MHS 299 (322)
T d1y7ea2 221 GYGIPIMKYTGHGGKSMASDADAELVSYIRQLLNKNNIAWQVATLGKVEEGGGGTVAKFLAG-YGIRTIDMGPAVISMHS 299 (322)
T ss_dssp TSCEEEEEEC-----------CHHHHHHHHHHHHHHTCCEEEEEECC-----CHHHHHHHHH-HTCEEEEECCEEBSTTS
T ss_pred CCCceEEEecCCCccccccccchHHHHHHHHHHHhcCCCeeEEEeccCCCCCcchHHHHHhc-CCCCEEEcCHHHhhhhH
Confidence 999988 556665543 4789999999999999999999865 9999999999999864 89999999999999999
Q ss_pred hhhhcCHHHHHHHHHHHHHHHhh
Q 012182 435 VREICGTEDIDIAYRHFKAFYES 457 (469)
Q Consensus 435 ~~E~~~~~Dv~~~~~ll~af~~~ 457 (469)
+|||++++|++++++|+++||+.
T Consensus 300 ~rE~~~~~D~~~~~~l~~aF~ee 322 (322)
T d1y7ea2 300 PMEITSKFDLYNAYLAYKAFYRE 322 (322)
T ss_dssp SSEEEEHHHHHHHHHHHHHTTTC
T ss_pred HHHHhchhhHHHHHHHHHHHhcC
Confidence 99999999999999999999973
|
| >d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} | Back information, alignment and structure |
|---|
| >d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1y7ea1 b.49.3.1 (A:101-233) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} | Back information, alignment and structure |
|---|
| >d2grea1 b.49.3.1 (A:74-186) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} | Back information, alignment and structure |
|---|
| >d1y0ya1 b.49.3.1 (A:73-163) Frv operon protein FrvX {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} | Back information, alignment and structure |
|---|
| >d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} | Back information, alignment and structure |
|---|
| >d1vhea1 b.49.3.1 (A:73-162) Hypothetical protein YsdC {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} | Back information, alignment and structure |
|---|
| >d2fvga1 b.49.3.1 (A:65-148) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vhoa1 b.49.3.1 (A:70-152) Putative endoglucanase TM1048 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} | Back information, alignment and structure |
|---|
| >d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1yloa1 b.49.3.1 (A:67-147) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} | Back information, alignment and structure |
|---|
| >d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|