Citrus Sinensis ID: 012665

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------46
Protein Sequence
MAKKNSWFSLVRRLFISDPEKEKRKRCIFGRLRIKSFASIAAATPLPSNDRTAVIEAEEEQNKHAVSVAIASAIKAAHVAAEVVRLTGTPQSTNGCERQVEEDSSIEIKLDVAQSPHQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSKELEDLDSIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVLFSRRSLHRKQNSLGDEKSFASSPVVPTYMAATESAKAKARSMSSPKIRPGTFDSYSESYSPCKKKLSLMSSLTSEVPSYSNIGRPSAYQQRSPSLKNVPGPIKSSRTPKDLSFDSKCSLLNWDRQSAFR
Secondary Structure (PSIPRED)
cccccccHHHHHHHccccccHHHHHHcccccccccccccccccccccccccccccHHHHHHccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHccccccccHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccc
Coil and Loop (DISEMBL)
MAKKNSWFSLVRRLfisdpekekRKRCIFGRLRIKSFAsiaaatplpsndrtaVIEAEEEQNKHAVSVAIASAIKAAHVAAEVVRltgtpqstngcerqveedssieikldvaqsphQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQkagswhcdenKQLQTLRDKIIKmdsscqrrwddstlTKQEADAMFLSKKEAAIRRERIKEYAFshrksadseqnkvnGRWRYWLEQWVDTQVMKSkeledldsiwttangnpreeyigkglrlknlqtkyhidgldspvlfsrrslhrkqnslgdeksfasspvvptyMAATESAKAKarsmsspkirpgtfdsysesyspckkKLSLMSSltsevpsysnigrpsayqqrspslknvpgpikssrtpkdlsfdskcsllnwdrqsafr
Flexible Loop (DISEMBL)
makknswfslvrrlfisdpekekrkrcifgrlriksfasiaaatplpsnDRTAVIEAEEEQNKHAVSVAIASAIKAAHVAAEVVRltgtpqstngcerQVEEDSSIEIKLDVAQSPHQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVklqalirgrnVRRQAFTTLKCLQSIVNIQSQVCAKRCQKAGSWHCDENKQLQTLRDKIIKmdsscqrrwddstltkQEADAMFLSKKEAAIRRERIKEyafshrksadseqnkvngrWRYWLEQWVDTQVMKskeledldsiwttangnpreeyIGKGLRLKNLQTKYHIDGLDSPVLFSRRSLHRKqnslgdeksfasspvvPTYMAATESakakarsmsspkirpgtfdsyseSYSPCKKKLSLMSSLTSEVpsysnigrpsayqqrspslknvpgpikssrtpkdlsfdskcsllnwdrqsafr
Low Complexity Region (SEG)
MAKKNSWFSLVRRLFISDPEKEKRKRCIFGRLRIKSFASIAAATPLPSNDRTAVIEAEEEQNkhavsvaiasaikaahvaaevvRLTGTPQSTNGCERQVEEDSSIEIKLDVAQSPHQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSKELEDLDSIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVLFSRRSLHRKQNSLGDEKSFASSPVVPTYMAATESAKAKARSMSSPKIRPGTFDSYSESYSPCkkklslmsslTSEVPSYSNIGRPSAYQQRSPSLKNVPGPIKSSRTPKDLSFDSKCSLLNWDRQSAFR
Disordered region (IsUnstruct)
******WFSLVRRLFISDP***KRKRCIFGRLRIKSFASIAAAT********************AVSVAIASAIKAAHVAAEVVRLT*******************************CEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMD***************************************************VNGRWRYWLEQWVDTQVMKSKELEDLDSIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVLF********************************************************************************************************************************
Disordered Region (DISOPRED)
MAKKNSWFS*******************************************************************************************************************QLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNI***************************************************************************************************************************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
MAKKNSWFSLVRRLFISDPEKEKRKRCIFGRLRIKSFASIAAATPLPSNDRTAVIEAEEEQNKHAVSVAIASAIKAAHVAAEVVRLTGTPQS*************IEIKLDVAQSPHQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLSKKEAAIRRERIKEYAF***********KVNGRWRYWLEQWVDTQVMKSKELEDLDSIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVLFSRRSLHRKQNSLGDEKSFASSPVVPTYMA***************KIRPGTF***********KKLSLMSSLTSEVPSYSNIGRPSAYQQRSPSLKNVPGPIKSSRTPKDLSFDSKCSLLNWDRQSAFR
Disordered Region (DISPRO)
*********************************************************************************************************************QCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLSKKEAAIRRERIKEYAFSHRKSADSEQ****GRWRYWLEQWVDTQVM********************************************************************************************************************************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAKKNSWFSLVRRLFISDPEKEKRKRCIFGRLRIKSFASIAAATPLPSNDRTAVIEAEEEQNKHAVSVAIASAIKAAHVAAEVVRLTGTPQSTNGCERQVEEDSSIEIKLDVAQSPHQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSKELEDLDSIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVLFSRRSLHRKQNSLGDEKSFASSPVVPTYMAATESAKAKARSMSSPKIRPGTFDSYSESYSPCKKKLSLMSSLTSEVPSYSNIGRPSAYQQRSPSLKNVPGPIKSSRTPKDLSFDSKCSLLNWDRQSAFR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	458	2.2.26 [Sep-21-2011]
Q8LPG9	668	Protein IQ-DOMAIN 14 OS=A	no	no	0.532	0.365	0.321	3e-26
Q9SF32	454	Protein IQ-DOMAIN 1 OS=Ar	no	no	0.371	0.374	0.335	6e-18
Q8L4D8	587	Protein IQ-DOMAIN 31 OS=A	no	no	0.126	0.098	0.603	7e-13
Q9FXI5	794	Protein IQ-DOMAIN 32 OS=A	no	no	0.203	0.117	0.365	7e-10

>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1

 Score =  120 bits (300), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 139/280 (49%), Gaps = 36/280 (12%)

Query: 123 IRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQ 182
           ++  +AT+IQ  FRGY+ARK+ RALKG+V+LQ ++RG +V+RQ    +K +Q +V +QSQ
Sbjct: 320 VQHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQ 379

Query: 183 VCAKRCQKAGSWHCDENKQLQTLRDKII-KMDSSCQRRWDDSTLTKQEADAMFLSKKEAA 241
           + ++R +        EN Q Q  +D+       +    WDDS LTK+E D+    K +A 
Sbjct: 380 IQSRRIKML------EN-QAQVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQRKTDAI 432

Query: 242 IRRERIKEYAFSHRKSADSEQNKVNGR--WRYWLEQWVDTQ-----VMKSKELEDLDSIW 294
           I+RER   YA+S +   +S ++  + R   ++W   WVD Q        S      D   
Sbjct: 433 IKRERSMAYAYSRKLWKNSPKSTQDNRSFPQWW--NWVDRQNPLASPAPSYSQPQRDFRL 490

Query: 295 TTANGNPREEYIGKGLRLKNLQTKYHID---------GLDSP--------VLFSRRSLHR 337
           T +   P    + +  +  +++   H D            +P          +SR  L  
Sbjct: 491 TPSRLCP--SPLSQSSKQHHIRLDNHFDTSTPRSSRSTFHTPSRPIHTGTSRYSRGRLRG 548

Query: 338 KQNSLGDEKSFASSPVVPTYMAATESAKAKARSMSSPKIR 377
           + +   D+ S  S P  P+YMA T SAKAK R  S+PK R
Sbjct: 549 QDSPFKDDDSLTSCPPFPSYMAPTVSAKAKVRPNSNPKER 588

May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1

 Score = 92.4 bits (228), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 100/185 (54%), Gaps = 15/185 (8%)

Query: 125 QLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVC 184
           + AA  IQS FRG+LAR+  + ++G  +L+ L+ G  V+RQA  TLKC+Q++  +QSQ+ 
Sbjct: 108 EAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQIR 167

Query: 185 AKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLSKKEAAIRR 244
           ++R + +        + LQ    ++  + +     W+ S  +K++ +A  L K EA +RR
Sbjct: 168 SRRIRMSEENQARHKQLLQKHAKELGGLKNGGN--WNYSNQSKEQVEAGMLHKYEATMRR 225

Query: 245 ERIKEYAFSHR---KSADSEQNKV-----NGRWRY-WLEQWVDTQVMKSKELEDLDSIWT 295
           ER   YAF+H+   KS     N +     N  W + WLE+W+  +  +S E E      T
Sbjct: 226 ERALAYAFTHQQNLKSFSKTANPMFMDPSNPTWGWSWLERWMAGRPWESSEKEQN----T 281

Query: 296 TANGN 300
           T N N
Sbjct: 282 TNNDN 286

Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1

 Score = 75.9 bits (185), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 45/58 (77%)

Query: 124 RQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQS 181
           R++AAT +Q+ FRGYLAR+A  ALKGI++LQALIRG  VRRQA  TL  +  IV +Q+
Sbjct: 112 REIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQA 169

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3

 Score = 65.5 bits (158), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 57/93 (61%)

Query: 101 EEDSSIEIKLDVAQSPHQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGR 160
           EE  S ++ +   +S  + ++++ +     IQ+  RG+LAR+ L   K ++KLQA +RG 
Sbjct: 191 EESESDDVIIVRKESDEKVDEKLDESVIVVIQAAVRGFLARRELLRSKKVIKLQAAVRGH 250

Query: 161 NVRRQAFTTLKCLQSIVNIQSQVCAKRCQKAGS 193
            VR QA  +L+C+Q+IV +Q+ V A+   K GS
Sbjct: 251 LVRSQAMGSLRCVQAIVKMQAMVRARHSTKDGS 283

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	458
255544109	510	conserved hypothetical protein [Ricinus	0.951	0.854	0.612	1e-156
224114199	464	predicted protein [Populus trichocarpa]	0.980	0.967	0.621	1e-150
225449925	469	PREDICTED: uncharacterized protein LOC10	0.975	0.953	0.593	1e-138
147859390	489	hypothetical protein VITISV_027408 [Viti	0.969	0.907	0.564	1e-131
356531619	468	PREDICTED: protein IQ-DOMAIN 14-like [Gl	0.989	0.967	0.572	1e-130
356542953	460	PREDICTED: protein IQ-DOMAIN 14-like [Gl	0.975	0.971	0.566	1e-127
357471183	436	IQ domain-containing protein [Medicago t	0.921	0.967	0.526	1e-119
356510606	457	PREDICTED: protein IQ-DOMAIN 14-like [Gl	0.967	0.969	0.517	1e-119
356541508	457	PREDICTED: protein IQ-DOMAIN 14-like [Gl	0.954	0.956	0.518	1e-115
449445162	480	PREDICTED: uncharacterized protein LOC10	0.962	0.918	0.517	1e-108

>gi|255544109|ref|XP_002513117.1| conserved hypothetical protein [Ricinus communis] gi|223548128|gb|EEF49620.1| conserved hypothetical protein [Ricinus communis]

 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 286/467 (61%), Positives = 357/467 (76%), Gaps = 31/467 (6%)

Query: 1   MAKKNSWFSLVRRLFISDPE------KEKRKRCIFGRLRIKS-FASIAAATPLPSNDRTA 53
           MAK+ SWF+L+RR F  D +       ++RK   FG++++KS    I+A +P P    T 
Sbjct: 66  MAKR-SWFNLIRRFFTPDTQGNQEKKNKRRKWVFFGKMKVKSRLPPISAPSP-PRARTTT 123

Query: 54  VIEAEEEQNKHAVSVAIASAIKAAHVAAEVVRLTGTPQSTNGC-ERQVEEDSSIEIKLDV 112
           + +AEE+Q+K A++V +               LTG PQST+ C E   +E S+ +++ D 
Sbjct: 124 LTQAEEQQSKRALNVVL---------------LTGVPQSTHQCREETKKEHSTTKVQADT 168

Query: 113 AQSPHQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKC 172
             S HQCEK+I++ AA +IQ+ FRG+LARKAL ALKGIVKLQA+IRGRNVRRQA  TLKC
Sbjct: 169 LHSIHQCEKKIQEFAAIKIQTAFRGFLARKALHALKGIVKLQAIIRGRNVRRQAMNTLKC 228

Query: 173 LQSIVNIQSQVCAKRCQKA-GSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEAD 231
           LQSIVNIQSQV AKR Q   G+   DENKQ Q + DKIIKMD++ QRRWD S  TK+EA+
Sbjct: 229 LQSIVNIQSQVSAKRIQMVEGTCDSDENKQFQQMSDKIIKMDTNSQRRWDGSIFTKEEAE 288

Query: 232 AMFLSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSKELEDLD 291
           A+FLSKK+AAI+RERI+EYAF+HR SA+SE+NKVNGRWRYWLEQWVDTQV KSKELEDLD
Sbjct: 289 ALFLSKKDAAIKRERIREYAFNHRNSAESERNKVNGRWRYWLEQWVDTQVSKSKELEDLD 348

Query: 292 SIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVLFSRRSLHRKQNSLGDEKSFASS 351
           ++  T+   PR EY GK L+L+ LQ +Y+I+GLDSP+   +RS HRKQ SLG++ SF+ S
Sbjct: 349 TV-LTSTPKPRVEYRGKQLKLRGLQRQYNIEGLDSPLAAPKRSFHRKQCSLGEDNSFSRS 407

Query: 352 PVVPTYMAATESAKAKARSMSSPKIRPGTFDSYSESYSPCKKKLSLMSSLTSEVPSYSNI 411
           P+VPTYMAATESAKAKARS+SSPK+RPG+ D+YS+SYSPCK KLSL+SS  SEV     +
Sbjct: 408 PIVPTYMAATESAKAKARSLSSPKLRPGSCDAYSDSYSPCKNKLSLISSTASEV----KL 463

Query: 412 GRPSAYQQRSPSLKNVPGPIKSSRTPKDLSFDSKCSLLNWDRQSAFR 458
           GRPSAYQQRSPSLKN+PGP+KS+RT KDLSFDS+CS   WD+QSAFR
Sbjct: 464 GRPSAYQQRSPSLKNLPGPVKSNRTLKDLSFDSECSFRTWDQQSAFR 510

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114199|ref|XP_002332425.1| predicted protein [Populus trichocarpa] gi|222832378|gb|EEE70855.1| predicted protein [Populus trichocarpa]

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 294/473 (62%), Positives = 358/473 (75%), Gaps = 24/473 (5%)

Query: 1   MAKKNSWFSLVRRLFISDP----EKEKRKR-CIFGRLRIKS-FASIAA-ATPLPSNDRTA 53
           MAKK SWF  VRRLF SD     EKE+R++   FG+ ++K+  ASIAA ++PL       
Sbjct: 1   MAKKRSWFYRVRRLFTSDTQSRQEKERRRKWMFFGKFKVKNRLASIAAPSSPLRE----- 55

Query: 54  VIEAEEEQNKHAVSVAIASAIKAAHVAAEVVR------LTGTPQSTNGCERQVEEDSSIE 107
             EAE+EQ+KHA+SVA+A+A  A               LTG P S N  E++ +   + E
Sbjct: 56  --EAEKEQSKHALSVALATAAAAEAAVVAAQAAAEVVLLTGVPHSINEYEKETDH-LAFE 112

Query: 108 IKLDVAQSPHQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAF 167
           ++ D   S HQ  + I++LAA +IQ+ FRGYLARKALRALKGIVKLQA+IRGRNVRRQA 
Sbjct: 113 VQGDAPHSTHQHARGIKELAAIKIQATFRGYLARKALRALKGIVKLQAIIRGRNVRRQAM 172

Query: 168 TTLKCLQSIVNIQSQVCAKRCQKA-GSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLT 226
           TTLKCLQSIVNIQSQVCAKR Q   G+W C ENKQL+ L DKIIKMD + +RRWD S LT
Sbjct: 173 TTLKCLQSIVNIQSQVCAKRIQMVEGAWTCSENKQLENLSDKIIKMDMNSERRWDSSLLT 232

Query: 227 KQEADAMFLSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSKE 286
           K+EA A FLSKKEAAI+RERI+EY F+ R SA+SE++K +GRWRYWL+QWVDTQ++KSKE
Sbjct: 233 KEEAVASFLSKKEAAIKRERIREYWFNRRNSAESERSKPSGRWRYWLDQWVDTQLVKSKE 292

Query: 287 LEDLDSIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVLFSRRSLHRKQNSLGDEK 346
           LEDLDS+  T+N  P  EY GK ++L+ LQ  YH+D +DSP+   R+S HRKQ SLG++ 
Sbjct: 293 LEDLDSV-LTSNPKPGVEYRGKQIKLRGLQRLYHLDSVDSPISAPRKSFHRKQCSLGEDN 351

Query: 347 SFASSPVVPTYMAATESAKAKARSMSSPKIRPGTFDSYSESYSPCKKKLSLMSSLTSEVP 406
           SF+ SPVVPTYMA TESAKAK RSMSSPK+RPG+FD+YS+SYSPCK KLSL+SS T+EVP
Sbjct: 352 SFSRSPVVPTYMATTESAKAKTRSMSSPKLRPGSFDAYSDSYSPCKNKLSLISSTTTEVP 411

Query: 407 SYSNIGRPSAYQQRSPSLKNVPGPIKSSR-TPKDLSFDSKCSLLNWDRQSAFR 458
           S +  GRPSAYQQRSPSLK +PGPIK +R T K LSFDS CSL  WD+QS+FR
Sbjct: 412 SSARYGRPSAYQQRSPSLKGLPGPIKCNRPTSKVLSFDSDCSLKTWDKQSSFR 464

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449925|ref|XP_002268819.1| PREDICTED: uncharacterized protein LOC100256816 [Vitis vinifera]

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/475 (59%), Positives = 354/475 (74%), Gaps = 28/475 (5%)

Query: 1   MAKKNSWFSLVRRLFISDP----EKEKRKRCIFGRLRIKSFASIAAATPLPSNDRTAVIE 56
           MAK+ SWF +V+R FI +     EKEKR+R +FGRL+IK  ASI A  P P  +R  + E
Sbjct: 1   MAKRRSWFHIVKRFFIPETHPKTEKEKRRRWLFGRLKIKRLASIEAP-PSPVKERV-LSE 58

Query: 57  AEEEQNKHAVSVAIASAIKAAHVAAEVVR------LTGTPQSTNGCERQVEEDSSIEIKL 110
           AEEEQ+KHA++VAIA+A  A    A          LT TPQ+T  C+++ EE   +EI +
Sbjct: 59  AEEEQSKHALTVAIATAAAAEAAVAAARAAAEVVRLTTTPQATEECDKKTEETPPVEIPI 118

Query: 111 DVAQSP---HQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAF 167
                P   H+ E ++  LAA +IQ+ FRGYLARKALRALKG+V+LQA++RGR VRRQA 
Sbjct: 119 IATPLPDLHHESEDQV--LAAIKIQTAFRGYLARKALRALKGLVRLQAIVRGRAVRRQAI 176

Query: 168 TTLKCLQSIVNIQSQVCAKRCQKAGSW-HCDENKQLQTLRDKIIKMDSSCQRRWDDSTLT 226
           TTLKCLQSIVNIQSQVCA+RCQKA    +CD+ KQLQ L+DK+IKMDS+ QRRWDDS L+
Sbjct: 177 TTLKCLQSIVNIQSQVCARRCQKAEECVNCDDIKQLQDLKDKVIKMDSNSQRRWDDSLLS 236

Query: 227 KQEADAMFLSKKEAAIRRERIKEYAFSHR------KSADSEQNKVNGRWRYWLEQWVDTQ 280
           K+E +A+FLSKKEA ++RERIKEY F  R      K A+SEQNK+NGRWRYWLE+WVDTQ
Sbjct: 237 KEEGNALFLSKKEAVMKRERIKEYTFGQRERKSIHKPAESEQNKLNGRWRYWLEKWVDTQ 296

Query: 281 VMKSKELEDLDSIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVLFSRRSLH-RKQ 339
           V K +EL  LD++W++ N   REE+ GK    +N Q +YHI+GL SPVL  RRS H RK+
Sbjct: 297 VAKREELPSLDTVWSS-NARSREEFPGKQHTPRNNQRQYHIEGLGSPVLVPRRSFHHRKE 355

Query: 340 NSLGDEKSFASSPVVPTYMAATESAKAKARSMSSPKIRPGTFDSYSESYSPCKKKLSLMS 399
            S+GDE SF SSP +PTYMAATESAKAK RS+SSPK+RPG+ D++S+S SP K +LSL+S
Sbjct: 356 RSIGDENSF-SSPPIPTYMAATESAKAKVRSVSSPKLRPGSLDTFSDSNSPHKNRLSLIS 414

Query: 400 SLTSEVPSYSNIGRPSAYQQRSPSLKNVPGPIKSSRTPKDLSFDSKCSLLNWDRQ 454
           S++SE  + S I +P   QQRSPSL+  PGPIKSSR+ K+LSFDS+CSLLNWDR+
Sbjct: 415 SISSEATNCSRISKPGMPQQRSPSLRG-PGPIKSSRSTKELSFDSECSLLNWDRR 468

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147859390|emb|CAN83552.1| hypothetical protein VITISV_027408 [Vitis vinifera]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 281/498 (56%), Positives = 353/498 (70%), Gaps = 54/498 (10%)

Query: 1   MAKKNSWFSLVRRLFISDPE---------------------------KEKRKRCIFGRLR 33
           MAK+ SWF +V+R FI +                             +EKR+R +FGRL+
Sbjct: 1   MAKRRSWFHIVKRFFIPETHPKTEKVDMLLVCLVSLPGSTTQGLNFSQEKRRRWLFGRLK 60

Query: 34  IKSFASIAAATPLPSNDRTAVIEAEEEQNKH------AVSVAIASAIKAAHVAAEVVRLT 87
           IK  ASI A  P P  +R  + EAEEEQ+KH      A + A  +A+ AA  AAEVVRLT
Sbjct: 61  IKRLASIEAP-PSPVKER-VLSEAEEEQSKHALTVAIATAAAAEAAVAAARAAAEVVRLT 118

Query: 88  GTPQSTNGCERQVEEDSSIEIKLDVAQSP---HQCEKEIRQLAATRIQSIFRGYLARKAL 144
            TPQ+T  C+++ EE   +EI +     P   H+ E ++  LAA +IQ+ FRGYLARKAL
Sbjct: 119 TTPQATEECDKKTEETPPVEIPIIATPLPDLHHESEDQV--LAAIKIQTAFRGYLARKAL 176

Query: 145 RALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKAGSW-HCDENKQLQ 203
           RALKG+V+LQA++RGR VRRQA TTLKCLQSIVNIQSQVCA+RCQKA    +CD+ KQLQ
Sbjct: 177 RALKGLVRLQAIVRGRAVRRQAITTLKCLQSIVNIQSQVCARRCQKAEECVNCDDIKQLQ 236

Query: 204 TLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLSKKEAAIRRERIKEYAFSHR------KS 257
            L+D   KMDS+ QRRWDDS L+K+E +A+FLSKKEA ++RERIKEY F  R      K 
Sbjct: 237 DLKD---KMDSNSQRRWDDSLLSKEEGNALFLSKKEAVMKRERIKEYTFGQRERKSXHKP 293

Query: 258 ADSEQNKVNGRWRYWLEQWVDTQVMKSKELEDLDSIWTTANGNPREEYIGKGLRLKNLQT 317
           A+SEQNK+NGRWRYWLE+WVDTQV K +EL  LD++W++ N   REE+ GK    +N Q 
Sbjct: 294 AZSEQNKLNGRWRYWLEKWVDTQVAKREELPSLDTVWSS-NARSREEFPGKQHTPRNNQR 352

Query: 318 KYHIDGLDSPVLFSRRSL-HRKQNSLGDEKSFASSPVVPTYMAATESAKAKARSMSSPKI 376
           +YHI+GL SPVL  RRS  HRK+ S+GDE SF SSP +PTYMAATESAKAK RS+SSPK+
Sbjct: 353 QYHIEGLGSPVLVPRRSFHHRKERSIGDENSF-SSPPIPTYMAATESAKAKVRSVSSPKL 411

Query: 377 RPGTFDSYSESYSPCKKKLSLMSSLTSEVPSYSNIGRPSAYQQRSPSLKNVPGPIKSSRT 436
           RPG+ D++S+S SP K +LSL+SS++SE  + S I +P   QQRSPSL+  PGPIKSSR+
Sbjct: 412 RPGSLDTFSDSNSPHKNRLSLISSISSEATNCSRISKPGMPQQRSPSLRG-PGPIKSSRS 470

Query: 437 PKDLSFDSKCSLLNWDRQ 454
            K+LSFDS+CSLLNWDR+
Sbjct: 471 TKELSFDSECSLLNWDRR 488

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531619|ref|XP_003534374.1| PREDICTED: protein IQ-DOMAIN 14-like [Glycine max]

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 271/473 (57%), Positives = 344/473 (72%), Gaps = 20/473 (4%)

Query: 1   MAKKNSWFSLVRRLFISDP-----EKEKRKRCIFGRLRIKSFASIAAATPLPSNDRTAVI 55
           MAKK SWFSLV+RLFI D      +KEKR++ IFGRL+ K   SI A  PLPS + T + 
Sbjct: 1   MAKKKSWFSLVKRLFIWDTHSTQDKKEKRRKWIFGRLKSKRIPSIKA--PLPSKE-TILS 57

Query: 56  EAEEEQNKHAVSVAIASAIKAAHVAAEVVRLTGTPQSTNGCERQVEEDSSIEIKLDVAQS 115
           EAEEEQ+KHA++VAIASA  A              + T   +   EE   ++ +    QS
Sbjct: 58  EAEEEQSKHALTVAIASAAAAEAAVTVAHAAAEVVRLTGQRKENSEESQPVKTRNGAPQS 117

Query: 116 PHQCEKEIRQ-LAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQ 174
            +QC++EI++  AA +IQ+ FRGYLA+KALRALKGIVKLQA+IRGR VRRQA +TLKCLQ
Sbjct: 118 TYQCQREIKESAAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQ 177

Query: 175 SIVNIQSQVCAKRCQKAGSWHCD--ENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADA 232
           SIV+IQSQVCA+R Q      CD  EN+ +Q  +DKII+MDS+ +R+WD+ST+ K+E D 
Sbjct: 178 SIVSIQSQVCARRLQMVEG-RCDYSENEDMQDSKDKIIRMDSNSERKWDESTVLKEEVDT 236

Query: 233 MFLSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSKELEDLDS 292
              SKKE  ++RERIKEY+F+HR+SA+SE++KVNGRWRYWLEQWVDTQ+ KSKELEDLDS
Sbjct: 237 SCTSKKETILKRERIKEYSFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEDLDS 296

Query: 293 IWTTANGNPREEYIGKGLRLK--NLQTKYHIDGLDSPVLFSRRSL-HRKQNSLGDEKSFA 349
           ++++ +    EEY G+ L+L   N Q +  ++GLDSP L SRRS  HR+Q S+G++ SF+
Sbjct: 297 VFSS-HSRAGEEYGGRQLKLTSINNQRQSPVEGLDSPTLGSRRSFPHRRQCSVGEDHSFS 355

Query: 350 SSPVVPTYMAATESAKAKARSMSSPKIRP-GTFDSYSESYSPCKKKLSLMSSLTSEVPSY 408
           SSP  P YMAATESAKAKARS SSPKIR  G  D  S+SYSPCKKKLS+ SS+ SEV + 
Sbjct: 356 SSPATPAYMAATESAKAKARSTSSPKIRTGGNVDMNSDSYSPCKKKLSISSSINSEVLNS 415

Query: 409 SNIGRPSA--YQQRSPSLKNVPGPIKSSRTP-KDLSFDSKCSLLNWDRQSAFR 458
             +G+ S+   QQRSPS K +  PIKSSRT  KDLS +S CSL NWDRQ++F+
Sbjct: 416 GRMGKLSSSNQQQRSPSFKGLSVPIKSSRTTIKDLSINSDCSLPNWDRQASFK 468

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542953|ref|XP_003539928.1| PREDICTED: protein IQ-DOMAIN 14-like [Glycine max]

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 267/471 (56%), Positives = 338/471 (71%), Gaps = 24/471 (5%)

Query: 1   MAKKNSWFSLVRRLFISDP-----EKEKRKRCIFGRLRIKSFASIAAATPLPSNDRTAVI 55
           MAKK SWFSLV+RLFI D      +KEKR++ IFGRL+ K   SI A  PLPS   T + 
Sbjct: 1   MAKKKSWFSLVKRLFIWDTHSTQDKKEKRRKWIFGRLKSKRLPSIKA--PLPSKG-TTLS 57

Query: 56  EAEEEQNKHAVSVAIASAIKAAHVAAEVVRLTGTPQSTNGCERQVEEDSSIEIKLDVAQS 115
           EAE+EQ+KHA++VAIASA  A              + T       EE   ++ +    QS
Sbjct: 58  EAEQEQSKHALTVAIASAAAAEAAVTAAHAAAEVVRLTGQRNENSEESQPVKTRNGAPQS 117

Query: 116 PHQCEKEIRQ-LAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQ 174
            +QC++EI++  AA +IQ+ FRGYLARKALRALKGIVKLQA+IRGR VRRQA ++LKCLQ
Sbjct: 118 TYQCQREIKESAAAIKIQTAFRGYLARKALRALKGIVKLQAIIRGRAVRRQAMSSLKCLQ 177

Query: 175 SIVNIQSQVCAKRCQKAGSWHCD--ENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADA 232
           SIV+IQSQVCA+R Q      CD  EN+++Q  +DKII+MDS+ +R+WD+ST+ K+E D 
Sbjct: 178 SIVSIQSQVCARRLQMVEG-RCDYSENEEMQDSKDKIIRMDSNSERKWDESTVLKEEVDT 236

Query: 233 MFLSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSKELEDLDS 292
              SK      RER KEY+F+HR+SA+SE++KVNGRWRYWLEQWVDTQ+ KSKELEDLDS
Sbjct: 237 SCTSK------RERTKEYSFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEDLDS 290

Query: 293 IWTTANGNPREEYIGKGLRLK-NLQTKYHIDGLDSPVLFSRRSL-HRKQNSLGDEKSFAS 350
           ++++ +    EEY G+ L+L+ N+Q +  ++GLDSP+L SRRS  HR+Q S+G++ SF S
Sbjct: 291 VFSS-HSRAGEEYGGRQLKLRSNIQRQNPVEGLDSPILGSRRSFPHRRQCSVGEDHSFLS 349

Query: 351 SPVVPTYMAATESAKAKARSMSSPKIRP-GTFDSYSESYSPCKKKLSLMSSLTSEVPSYS 409
           SP  P YMAATESAKAKARS SSPKIR  G  D  S+SYSPCKKKLS+ SS+ SE+ S  
Sbjct: 350 SPATPAYMAATESAKAKARSTSSPKIRTGGNVDMNSDSYSPCKKKLSIASSINSEMLSNG 409

Query: 410 NIGRPSA-YQQRSPSLKNVPGPIKSSRTP-KDLSFDSKCSLLNWDRQSAFR 458
            +G+ S   QQRSPS K +  PIKSSRT  KDLS +S CSL NWDRQ+ F+
Sbjct: 410 RVGKLSVNQQQRSPSFKGLSVPIKSSRTTIKDLSINSDCSLPNWDRQAFFK 460

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357471183|ref|XP_003605876.1| IQ domain-containing protein [Medicago truncatula] gi|358344582|ref|XP_003636367.1| IQ domain-containing protein [Medicago truncatula] gi|355502302|gb|AES83505.1| IQ domain-containing protein [Medicago truncatula] gi|355506931|gb|AES88073.1| IQ domain-containing protein [Medicago truncatula]

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/467 (52%), Positives = 324/467 (69%), Gaps = 45/467 (9%)

Query: 3   KKNSWFSLVRRLFISDP-----EKEKRKRCIFGRLRIKSFASIAAATPLPSNDRTAVIEA 57
           KK SWF++V+R F+ D      +KEKR++ IFGRL+ K   SI A         T   E 
Sbjct: 4   KKKSWFNIVKRFFVWDSHSTQEKKEKRRKWIFGRLKTKKLPSITAPP-------TISKET 56

Query: 58  EEEQNKHAVSVAIASAIKAAHVAAEVVRLTGTPQSTNGCERQVEEDSSIEIKLDVAQSPH 117
           EEE+ KH+ S     A+ A  V +E +                ++D+S E        P 
Sbjct: 57  EEEKTKHSDS---EDAVSATEVVSESI--------------YQKQDNSEE------SQPI 93

Query: 118 QCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIV 177
           +  +EI++ +A +IQ+ FRGYLA+KALRALKGIVKLQA+IRGR VRRQA  TLK LQSIV
Sbjct: 94  KIRREIKEFSAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMNTLKSLQSIV 153

Query: 178 NIQSQVCAKRCQKA-GSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLS 236
           +IQS++CA+R Q   G W   E++++ + RDKII+MDS+ +R+WDDSTL K+E DA  + 
Sbjct: 154 SIQSKICARRLQMVEGKWDYFEDEEMHSSRDKIIRMDSNSERKWDDSTLLKEEVDASCMI 213

Query: 237 KKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSKELEDLDSIWTT 296
           KKE  I+RERIKEY F+HR+SA+SE++KVNGRWRYWLEQWVDTQ+ KSKELEDLDS++++
Sbjct: 214 KKEGIIKRERIKEYTFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEDLDSVYSS 273

Query: 297 ANGNPREEYIGKGLRLK--NLQTKYHIDGLDSPVLFSRRSL-HRKQNSLGDEKSFASSPV 353
            +    +E+ G+ L+L+  N Q    I+GL+SP+LF+R S  HR++ S+G+++SF+SSP 
Sbjct: 274 -HSKIGDEFGGRQLKLRSTNRQNPNPIEGLESPILFARNSFPHRRKCSIGEDQSFSSSPA 332

Query: 354 VPTYMAATESAKAKARSMSSPKIRPGTFDSYSESY-SPCKKKLSLMSSLTSEVPSYSNIG 412
            P YMAATESAKAKARS SSPK R   +D  S+SY SPCKKKLS++SS+ SEV    N G
Sbjct: 333 TPAYMAATESAKAKARSTSSPKARSWNYDMNSDSYLSPCKKKLSIVSSVNSEVL---NRG 389

Query: 413 RPSA-YQQRSPSLKNVPGPIKSSRTPKDLSFDSKCSLLNWDRQSAFR 458
           + S   QQRSPS K +  PIKSSRT KDLS +S  SL NWDRQS+F+
Sbjct: 390 KLSGCNQQRSPSFKGISVPIKSSRTIKDLSINSDSSLPNWDRQSSFK 436

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510606|ref|XP_003524028.1| PREDICTED: protein IQ-DOMAIN 14-like [Glycine max]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/460 (51%), Positives = 324/460 (70%), Gaps = 17/460 (3%)

Query: 1   MAKKNSWFSLVRRLFISDP---EKEKRKRCIFGRLRIKSFASIAAATPLPSNDRTAVIEA 57
           MAKK  WFS+ ++LF+ D    +++KR+  IFGR++ K   SI A  P P +  T + E 
Sbjct: 1   MAKKG-WFSMFKKLFLWDTHSSQEKKRRAWIFGRVKTKRLPSITA--PPPPSKETRLSEV 57

Query: 58  EEEQNKHAVSVAIASAIKAA------HVAAEVVRLTGTPQSTNGCERQVEEDSSIEIKLD 111
           EEE +KHA++VAIASA  A        VA EVV+L     +    + + E+   ++   D
Sbjct: 58  EEEHSKHALTVAIASAAAAEAAITAAQVAVEVVKLQSA--AHQQLKEKQEQLQPVKTSHD 115

Query: 112 VAQSPHQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLK 171
           V  S HQC+++I++ +A +IQ  FRGYLARKA RALKGIVKLQA+IRGR VRRQA  TLK
Sbjct: 116 VPHSTHQCQRKIQESSAIKIQIAFRGYLARKASRALKGIVKLQAIIRGRAVRRQALNTLK 175

Query: 172 CLQSIVNIQSQVCAKRCQKA-GSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEA 230
           CL+SIV+IQSQV A++ Q   G W C E++++Q  RDKII+MDS+ +RRWDDS L K+E 
Sbjct: 176 CLESIVSIQSQVFARKLQMVEGRWDCGEHEEMQGSRDKIIRMDSNSERRWDDSILLKEEV 235

Query: 231 DAMFLSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSKELEDL 290
            A  +SKKEA ++RE++KEY+F+HR+SA+SE+NK+NGRWRYW+EQWVDTQ+ K KELEDL
Sbjct: 236 KASCISKKEAVLKREKVKEYSFNHRRSAESERNKINGRWRYWMEQWVDTQLSKGKELEDL 295

Query: 291 DSIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVLFSRRSL-HRKQNSLGDEKSFA 349
           DS++++    P EE     L+L+N+  +  ++  DSP L SR S  HR Q S  ++ S  
Sbjct: 296 DSVFSSHYSRPGEECERSQLKLRNVHRQNQVEAFDSPPLASRNSFPHRSQTSEAEDHSVP 355

Query: 350 SSPVVPTYMAATESAKAKARSMSSPKIR-PGTFDSYSESYSPCKKKLSLMSSLTSEVPSY 408
           SSP +PTYMAAT+S +AKARS SSP+ R  G+FD  S+SYS CKKKL +++S+  EV S 
Sbjct: 356 SSPAIPTYMAATKSTQAKARSTSSPRARIGGSFDINSDSYSLCKKKLPIVTSINGEVFSN 415

Query: 409 SNIGRPSAYQQRSPSLKNVPGPIKSSRTPKDLSFDSKCSL 448
             +G+ S+ QQRSPSLK +P P+K S+T +DLS +S CS+
Sbjct: 416 GRMGKLSSNQQRSPSLKGLPSPVKLSQTLRDLSINSDCSV 455

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541508|ref|XP_003539217.1| PREDICTED: protein IQ-DOMAIN 14-like [Glycine max]

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/457 (51%), Positives = 320/457 (70%), Gaps = 20/457 (4%)

Query: 4   KNSWFSLVRRLFI-----SDPEKEKRKRC-IFGRLRIKSFASIAAATPLPSNDRTAVIEA 57
           K  WFS+ ++LF+     S  +KEKR+R  IFGR++ K   SI A  P PS + T + EA
Sbjct: 3   KKGWFSMFKKLFLWNTHSSQEKKEKRRRAWIFGRVKTKRLPSITAPPPPPSKE-TRLSEA 61

Query: 58  EEEQNKHAVSVAIASAIKAA------HVAAEVVRLTGTPQSTNGCERQVEEDSSIEIKLD 111
           EEE +KHA++VAIASA  A        VA EVVRL          +++  +   ++   D
Sbjct: 62  EEEHSKHALTVAIASAAAAEAAITAAQVAVEVVRLQSAAHLQLKEKQEQLQLQPVKTSHD 121

Query: 112 VAQSPHQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLK 171
             Q+ HQ +++I++ +A +IQ+ +RGYLARKALRALKGIVKLQA+IRGR VRRQA +TLK
Sbjct: 122 APQNTHQRQRKIQESSAIKIQTAYRGYLARKALRALKGIVKLQAIIRGRAVRRQALSTLK 181

Query: 172 CLQSIVNIQSQVCAKRCQKAGS-WHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEA 230
           CL+SIV+IQSQV A++ Q     W C E++++Q  RDKII+MDS+ +R WDDS L K+E 
Sbjct: 182 CLESIVSIQSQVFARKSQMVEERWDCGEHEEMQGSRDKIIRMDSNSERTWDDSILLKEEV 241

Query: 231 DAMFLSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSKELEDL 290
           DA  +SKKEA ++RE++KEY+F+HR+SA+SE+NK+NGRWRYW+EQWVDTQ+ KSKELEDL
Sbjct: 242 DASCVSKKEAVLKREKVKEYSFNHRRSAESERNKINGRWRYWMEQWVDTQLSKSKELEDL 301

Query: 291 DSIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVLFSRRSLHRKQNSLGDEKSFAS 350
           DS++++    P EE   + L+L+N Q +  I+ LDSP L S     R Q S  ++ S  S
Sbjct: 302 DSVFSSHYSRPGEECGRRQLKLRNFQRQNQIEALDSPSLSS-----RNQTSGAEDHSVPS 356

Query: 351 SPVVPTYMAATESAKAKARSMSSPKIR-PGTFDSYSESYSPCKKKLSLMSSLTSEVPSYS 409
           SP +PTYMAAT+S +AKARS SSP+ R  G FD  S+SYSPCK KL +++S+  EV S  
Sbjct: 357 SPAIPTYMAATKSTQAKARSTSSPRARIGGNFDINSDSYSPCKNKLPIVTSINGEVLSNG 416

Query: 410 NIGRPSAYQQRSPSLKNVPGPIKSSRTPKDLSFDSKC 446
            IG+ S+ QQRSPSLK +P P+K S+T + LS +S C
Sbjct: 417 RIGKLSSNQQRSPSLKGLPRPLKLSQTLRGLSINSDC 453

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445162|ref|XP_004140342.1| PREDICTED: uncharacterized protein LOC101203390 [Cucumis sativus]

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 257/497 (51%), Positives = 327/497 (65%), Gaps = 56/497 (11%)

Query: 1   MAKKNSWFSLVRRLFISD----PEK-EKRKRCIFGRLRIKSFASIAAATPLPSNDRTAVI 55
           M KK  WF LV++LFIS+    PEK +KR + +FG++R K  A++ A  PLP    T   
Sbjct: 1   MGKKKGWFYLVKKLFISESQPKPEKKQKRWKWVFGKMRNKRLATLTA--PLPPKATTTTT 58

Query: 56  E-----AEEEQNKHAVSVAIASAIKAAHVAAEVVR------LTGTPQSTNGCERQVEEDS 104
                  EEE+ K A+SVAIAS   A    A          LTGT QS        ++++
Sbjct: 59  SRLEEEEEEEERKQALSVAIASTAAAEAAVAAAKAAVEVVWLTGTTQSH-------QQEA 111

Query: 105 SIEIKLDVAQSPH----QCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGR 160
           + E+   + ++P     + E+EI + AA  IQ+ FRG+LARKALRALKGIV+LQA+IRGR
Sbjct: 112 AEEVFKPLKKAPPADLLKREREIHEFAAITIQTAFRGFLARKALRALKGIVRLQAIIRGR 171

Query: 161 NVRRQAFTTLKCLQSIVNIQSQVCAKRCQ-KAGSWHCDENKQLQTLRDKIIKMDSSCQRR 219
            VRRQA  TLKCLQSIV+IQSQVC+ R      +++  E +Q Q+L+DKIIK+DS+ QR 
Sbjct: 172 AVRRQAIATLKCLQSIVSIQSQVCSNRLHLPQNTFNSPETRQFQSLKDKIIKLDSNDQR- 230

Query: 220 WDDSTLTKQEADAMFLSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVDT 279
           WDDS L+K+EADA+FLS+KEA IRRER+KEY F+HR+SA+SE+ KV GRWRYWL+QWVDT
Sbjct: 231 WDDSLLSKEEADAVFLSRKEAVIRRERVKEYLFAHRRSAESERKKVRGRWRYWLDQWVDT 290

Query: 280 QVMKSKELEDLDSIWT-------TAN----GNPREEYIGKGLRLKNLQTKYHIDGLDSPV 328
           Q+ KSKELEDLDSI+T       T N     NP  + + +       Q+      L SP 
Sbjct: 291 QLSKSKELEDLDSIFTSNPKYKETTNERFKPNPTTKNMDRTTEHPPNQSPSQKPALKSPF 350

Query: 329 LFSRRSLHRKQNSLGD----EKSFASSPVVPTYMAATESAKAKARSMSSPKIRP-GTFDS 383
                  H+KQ SLG       SF+SSP+VPTYMAATESAKAK+RS+SSPK+RP G  D+
Sbjct: 351 ------HHKKQRSLGGGIDSNSSFSSSPLVPTYMAATESAKAKSRSLSSPKLRPAGGLDT 404

Query: 384 YSESYSPCK-KKLSLMSSLTSEVPSYSNIGRPSAYQQRSPSLKNVPGPIKSSRT-PKDLS 441
            S+  SPCK K+L L+SS+ SEV   S+  R    QQRSP LK +PGP +SSRT  KDLS
Sbjct: 405 CSDGNSPCKTKQLCLVSSMVSEV-GISSGRRGFHQQQRSPGLKGLPGPTRSSRTLIKDLS 463

Query: 442 FDSKCSLLNWDRQSAFR 458
            DS+ SL NWDRQSAF+
Sbjct: 464 IDSEHSLPNWDRQSAFQ 480

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	458
TAIR|locus:2181635	443	IQD11 "AT5G13460" [Arabidopsis	0.755	0.781	0.519	2.4e-83
TAIR|locus:2143503	461	iqd2 "AT5G03040" [Arabidopsis	0.371	0.368	0.370	2.7e-33
TAIR|locus:2150650	403	IQD12 "AT5G03960" [Arabidopsis	0.572	0.650	0.352	6e-32
TAIR|locus:2043959	669	IQD14 "AT2G43680" [Arabidopsis	0.537	0.367	0.330	3.6e-29
TAIR|locus:2100504	430	IQD3 "AT3G52290" [Arabidopsis	0.412	0.439	0.333	9.5e-27
TAIR|locus:2139187	423	IQD16 "AT4G10640" [Arabidopsis	0.541	0.586	0.342	1.6e-26
TAIR|locus:2097478	517	IQD13 "AT3G59690" [Arabidopsis	0.532	0.471	0.328	2.5e-26
TAIR|locus:2090409	422	IQD5 "AT3G22190" [Arabidopsis	0.550	0.597	0.336	6.2e-26
TAIR|locus:2134628	534	iqd17 "AT4G00820" [Arabidopsis	0.344	0.295	0.404	6.8e-26
TAIR|locus:2200945	527	IQD18 "AT1G01110" [Arabidopsis	0.325	0.282	0.395	9.8e-24

TAIR|locus:2181635 IQD11 "AT5G13460" [Arabidopsis thaliana (taxid:3702)]

 Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
 Identities = 200/385 (51%), Positives = 258/385 (67%)

Query:    96 CERQVE--EDSSIEIKLDVAQSPHQCEKEI-RQ---LAATRIQSIFRGYLARKALRALKG 149
             C RQ++  E+S      + A    Q +  + RQ   LAATRIQ+ FRG+LARKALRALKG
Sbjct:    76 CSRQLDSIEESKGSTSPETADLVVQYQMFLNRQEEVLAATRIQTAFRGHLARKALRALKG 135

Query:   150 IVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKAGSWHCDENKQLQTLRDKI 209
             IVKLQA IRGR VRRQA TTLKCLQS+VNIQSQVC KR Q  G  H D  +      D I
Sbjct:   136 IVKLQAYIRGRAVRRQAMTTLKCLQSVVNIQSQVCGKRTQIPGGVHRDYEES-NIFNDNI 194

Query:   210 IKMDSSCQRRWDDSTLTKQEADAMFLSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRW 269
             +K+D++ Q+RWDDS LTK+E +A+ +SKKEA++RRERIKEYA +HRKSA+S Q + N +W
Sbjct:   195 LKVDTNGQKRWDDSLLTKEEKEAVVMSKKEASLRRERIKEYAVTHRKSAESYQKRSNTKW 254

Query:   270 RYWLEQWVDTQVMKSKELEDLDSIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVL 329
             +YWL++WVDTQ+ KSKELEDLD    ++   P++E + +    K L+T  +     SP  
Sbjct:   255 KYWLDEWVDTQLTKSKELEDLDF---SSKTKPKDETLNE----KQLKTPRN----SSP-- 301

Query:   330 FSRRSL--HRKQNSLG-DEKSFASSPVV-PTYMAATESAKAKARSMSSPKIRPGTFDSYS 385
               RR +  HR+Q S+G DE+S A+  +  PTYM ATESAKAK+RS+SSP+IRP +FD+ S
Sbjct:   302 --RRLVNNHRRQVSIGEDEQSPAAVTITTPTYMVATESAKAKSRSLSSPRIRPRSFDTQS 359

Query:   386 ESYSPCXXXXXXXXXXTSEVPS---YSNIG---RPSAYQQRSPSLK--NVPGPIKSSRTP 437
             ESYSP            SE PS    +N G   RPSAYQQRSP L+  N+ GP+KS    
Sbjct:   360 ESYSPYKNKLCLTTSMMSEAPSKVRIANNGSNTRPSAYQQRSPGLRGFNI-GPLKSCNNN 418

Query:   438 K----DLSFDSKCSLLNWDRQSAFR 458
                  DLS +S+ SL +W++QS+ R
Sbjct:   419 NTLLNDLSINSERSLPSWNKQSSLR 443

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

TAIR|locus:2143503 iqd2 "AT5G03040" [Arabidopsis thaliana (taxid:3702)]

 Score = 291 (107.5 bits), Expect = 2.7e-33, Sum P(3) = 2.7e-33
 Identities = 67/181 (37%), Positives = 109/181 (60%)

Query:   121 KEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQ 180
             K   + AA  IQ+IFRGYLAR+ALRA++G+V+L+ L+ G  V+RQA  TLKC+Q++  +Q
Sbjct:   111 KSNEEAAAILIQTIFRGYLARRALRAMRGLVRLKLLMEGSVVKRQAANTLKCMQTLSRVQ 170

Query:   181 SQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLSKKEA 240
             SQ+ A+R + +      + + LQ    ++  + +     W+DS  +K++ +A  LSK EA
Sbjct:   171 SQIRARRIRMSEENQARQKQLLQKHAKELAGLKNG--DNWNDSIQSKEKVEANLLSKYEA 228

Query:   241 AIRRERIKEYAFSHR---KSADSEQNKV-----NGRWRY-WLEQWVDTQVMKSKELEDLD 291
              +RRER   Y++SH+   K+     N +     N  W + WLE+W+  + ++S E E  +
Sbjct:   229 TMRRERALAYSYSHQQNWKNNSKSGNPMFMDPSNPTWGWSWLERWMAGRPLESSEKEQSN 288

Query:   292 S 292
             S
Sbjct:   289 S 289

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2150650 IQD12 "AT5G03960" [Arabidopsis thaliana (taxid:3702)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 100/284 (35%), Positives = 149/284 (52%)

Query:   115 SPHQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQ 174
             S H  +K    +AA +IQS FR  LARKALRALK +V+LQA++RGR VRR+    LK   
Sbjct:    97 SQHFVKKLAPNVAAIKIQSAFRASLARKALRALKALVRLQAIVRGRAVRRKVSALLKSSH 156

Query:   175 SIVNIQSQVCAKRCQKAGSWHCDENK---QLQTLRDKIIKMDSSCQRRWDDSTLTKQEAD 231
             S     S +  ++ ++   W   +++   +LQ     +      C   WD S LTK++  
Sbjct:   157 SNKASTSNIIQRQTERK-HWSNTKSEIKEELQVSNHSLCNSKVKCNG-WDSSALTKEDIK 214

Query:   232 AMFLSKKEAAIRRERIKEYAFSHRKS------ADSEQNKVNGRWRYWLEQWVDTQVMKSK 285
             A++L K+E  I+R+R+ +Y+ S R+        +S   K  G     LE W +     SK
Sbjct:   215 AIWLRKQEGVIKRDRMLKYSRSQRERRSPHMLVESLYAKDMGMRSCRLEHWGE-----SK 269

Query:   286 ELEDLDSIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVLFSRRSLHR-KQNSLGD 344
               + ++S        P E  +   ++L++LQ +   DG DSP  F RRS  R +Q+ L D
Sbjct:   270 SAKSINSFLI-----PSEMLVPTKVKLRSLQRQDSGDGQDSPFSFPRRSFSRLEQSILED 324

Query:   345 EKSFASSPVVPTYMAATESAKAKARSMSSPKIRPGTFDSYSESY 388
             E  F  S     YM+ TESA+ K RS+S+P+ R G  DS  ++Y
Sbjct:   325 ESWFQRSNGFQPYMSVTESAREKMRSLSTPRQRVGIMDSLFDNY 368

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2043959 IQD14 "AT2G43680" [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 3.6e-29, Sum P(2) = 3.6e-29
 Identities = 92/278 (33%), Positives = 140/278 (50%)

Query:   123 IRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQ 182
             ++  +AT+IQ  FRGY+ARK+ RALKG+V+LQ ++RG +V+RQ    +K +Q +V +QSQ
Sbjct:   321 VQHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQ 380

Query:   183 VCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQR-RWDDSTLTKQEADAMFLSKKEAA 241
             + ++R +        EN Q Q  +D+     S      WDDS LTK+E D+    K +A 
Sbjct:   381 IQSRRIKML------EN-QAQVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQRKTDAI 433

Query:   242 IRRERIKEYAFSHRKSADSEQNKVNGRW--RYWLEQWVDTQ-----VMKSKELEDLDSIW 294
             I+RER   YA+S +   +S ++  + R   ++W   WVD Q        S      D   
Sbjct:   434 IKRERSMAYAYSRKLWKNSPKSTQDNRSFPQWW--NWVDRQNPLASPAPSYSQPQRDFRL 491

Query:   295 TTAN--GNPREEYIGKG-LRLKN---------LQTKYHIDGLD---SPVLFSRRSLHRKQ 339
             T +    +P  +   +  +RL N          ++ +H            +SR  L  + 
Sbjct:   492 TPSRLCPSPLSQSSKQHHIRLDNHFDTSTPRSSRSTFHTPSRPIHTGTSRYSRGRLRGQD 551

Query:   340 NSLGDEKSFASSPVVPTYMAATESAKAKARSMSSPKIR 377
             +   D+ S  S P  P+YMA T SAKAK R  S+PK R
Sbjct:   552 SPFKDDDSLTSCPPFPSYMAPTVSAKAKVRPNSNPKER 589

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2100504 IQD3 "AT3G52290" [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 9.5e-27, Sum P(2) = 9.5e-27
 Identities = 71/213 (33%), Positives = 123/213 (57%)

Query:   121 KEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQ 180
             K + ++AA +IQ+ FRGY+AR+ALRAL+G+V+L++L++G+ VRRQA +TL+ +Q++  +Q
Sbjct:   104 KSMEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLVQGKCVRRQATSTLQSMQTLARVQ 163

Query:   181 SQVCAKRCQKAGSWHCDENKQLQT--LRDKIIKMDSSCQRRWDDSTLTKQEADAMFLSKK 238
              Q+  +R + +      E+KQ  T  L+ K  K        W+DSTL++++ +A  L+K+
Sbjct:   164 YQIRERRLRLS------EDKQALTRQLQQKHNKDFDKTGENWNDSTLSREKVEANMLNKQ 217

Query:   239 EAAIRRERIKEYAFSHRKS--------ADSEQNKVNGRWRY-WLEQWVDTQVMKSKELE- 288
              A +RRE+   YAFSH+ +        + +  +  N  W + WLE+W+  +  ++  L  
Sbjct:   218 VATMRREKALAYAFSHQNTWKNSTKMGSQTFMDPNNPHWGWSWLERWMAARPNENHSLTP 277

Query:   289 ---DLDSIWTTANGNPREEYIGKGLRLKNLQTK 318
                + DS   +       E I +G   KNL  +
Sbjct:   278 DNAEKDSSARSVASRAMSEMIPRG---KNLSPR 307

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2139187 IQD16 "AT4G10640" [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
 Identities = 96/280 (34%), Positives = 139/280 (49%)

Query:   124 RQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQV 183
             R  AA  IQ+ FRGYL+R+ALRALKGIVKLQAL+RG NVR QA  TL+C++++V +Q QV
Sbjct:    99 RHWAAIIIQTAFRGYLSRRALRALKGIVKLQALVRGNNVRNQAKLTLRCIKALVRVQDQV 158

Query:   184 CAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDST----------LTKQ----- 228
                  Q+          +   +  +   M +     WD  T          L++      
Sbjct:   159 LNHHQQQRSRVLLSPPSRNYNIEARRNSMFAESNGFWDTKTYLQDIRSRRSLSRDMNRCN 218

Query:   229 -----EADAMFLSKK-EAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLE--QWVDTQ 280
                  E   + L KK E AI+RE+ +  A S++  + S +N+  G  R  LE  QW+D +
Sbjct:   219 NEFYSEETELILQKKLEIAIKREKAQALALSNQIRSRSSRNQSAGDDRELLERTQWLD-R 277

Query:   281 VMKSKELEDLDSIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVLFSRRSLHRKQN 340
              M +K+ +D      T + N R+        L+ + T +H     +     R S      
Sbjct:   278 WMATKQWDDT----ITNSTNVRDPI----KTLEAVTTHHHQRSYPATPPSCRASRSVMVR 329

Query:   341 SLGDEKSFASSPVVPTYMAATESAKAKARSMSSPKIRPGT 380
             S       + S + P YM+ATESAKAKAR+ S+P+ RP T
Sbjct:   330 SASPRIPCSPSSMQPNYMSATESAKAKARTQSTPRRRPMT 369

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2097478 IQD13 "AT3G59690" [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
 Identities = 92/280 (32%), Positives = 137/280 (48%)

Query:   123 IRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQ 182
             ++   A +IQ+ FRGY+AR++ RALKG+V+LQ ++RG +V+RQ    +K +Q +V +Q+Q
Sbjct:   167 VKNAYAIKIQAAFRGYMARRSFRALKGLVRLQGVVRGHSVKRQTMNAMKYMQLLVRVQTQ 226

Query:   183 VCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLSKKEAAI 242
             V ++R Q        EN+     +D    + S     WDDS LTK+E D     K +A I
Sbjct:   227 VQSRRIQML------ENRARND-KDDTKLVSSRMSDDWDDSVLTKEEKDVRLHRKIDAMI 279

Query:   243 RRERIKEYAFSH---RKSADSEQN-KVNGRWRYWLEQWVDTQVMKSKELEDLDSIWTTAN 298
             +RER   YA+SH   + S  S Q+ + +G   +W   WVD Q  +++    L     + +
Sbjct:   280 KRERSMAYAYSHQLWKNSPKSAQDIRTSGFPLWW--NWVDRQKNQNQPFR-LTPTRPSLS 336

Query:   299 GNPREEYIGKGLRLKNLQTKYHIDGLDSPVLFSRRSLHRKQN--------SLG------- 343
               P+        RL N       +   S  +   R +H  Q         S G       
Sbjct:   337 PQPQSSNQNH-FRLNNSFDTSTPNSSKSTFVTPSRPIHTPQPYSSSVSRYSRGGGRATQD 395

Query:   344 ----DEKSFASSPV--VPTYMAATESAKAKARSMSSPKIR 377
                 D+ S  S P    P+YMA T SAKAK R+ S+PK R
Sbjct:   396 SPFKDDDSLTSCPPFSAPSYMAPTVSAKAKLRANSNPKER 435

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2090409 IQD5 "AT3G22190" [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 6.2e-26, P = 6.2e-26
 Identities = 92/273 (33%), Positives = 144/273 (52%)

Query:   120 EKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNI 179
             E+     AATRIQ+ +RG+LAR+ALRALKG+V+LQAL+RG  VR+QA  TL+C+Q++V +
Sbjct:    83 EQSRENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVRV 142

Query:   180 QSQVCAKRCQKAGSWHCDENKQL--QTLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLSK 237
             Q++V A+R + A     + ++Q   Q L D+    +   +  W DS  + ++  A  L +
Sbjct:   143 QARVRARRVRLALELESETSQQTLQQQLADEARVRE--IEEGWCDSIGSVEQIQAKLLKR 200

Query:   238 KEAAIRRERIKEYAFSHR-------KSADS--EQNKVNGRWRYWLEQWVDTQVMKSKELE 288
             +EAA +RER   YA +H+        SA S  + +K N  W  WLE+W+  +  +++ L+
Sbjct:   201 QEAAAKRERAMAYALTHQWQAGTRLLSAHSGFQPDKNNWGWN-WLERWMAVRPWENRFLD 259

Query:   289 D--LDSIWTTANGNPREEYIGKGLRLKNLQTKYHIDGLDSPVLFSRRSLHRKQNSLGDEK 346
                 D      NG  + E + K  ++K++    +   L S V  S +     Q+  GD  
Sbjct:   260 SNLRDDAKLGENGMEQSENVPK-TQIKSVSKMPNTSNLVSGV--SSQMTGPCQSD-GDSS 315

Query:   347 SFASSPVVPTYMAATESAKAKARSMSSPKIRPG 379
             S   S  +P    A +S  AK         RPG
Sbjct:   316 SPGISSSIPVVSKA-KSKPAKDDLAVEVNSRPG 347

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2134628 iqd17 "AT4G00820" [Arabidopsis thaliana (taxid:3702)]

 Score = 255 (94.8 bits), Expect = 6.8e-26, Sum P(3) = 6.8e-26
 Identities = 70/173 (40%), Positives = 97/173 (56%)

Query:   127 AATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVC-- 184
             AA  IQ+ FRGYLAR+ALRALKG+VKLQAL+RG NVR+QA  TL+C+Q++V +QS+V   
Sbjct:   134 AAVVIQTGFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSRVLDQ 193

Query:   185 AKRCQKAGSWHC---D-----ENKQLQTLRDK--IIKMDSSCQRRWDDSTLTKQEADAMF 234
              KR    GS      D     E++ LQ + D+  + +  SS    WDD   T +E  AM 
Sbjct:   194 RKRLSHDGSRKSAFSDTQSVLESRYLQEISDRRSMSREGSSIAEDWDDRPHTIEEVKAML 253

Query:   235 LSKKEAAIRRERIKEY--AFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSK 285
               +++ A+RRE       AFSH+             +     +W+D + M SK
Sbjct:   254 QQRRDNALRRESNNSISQAFSHQVRRTRGSYSTGDEYEEERPKWLD-RWMASK 305

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2200945 IQD18 "AT1G01110" [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 9.8e-24, Sum P(3) = 9.8e-24
 Identities = 64/162 (39%), Positives = 88/162 (54%)

Query:   127 AATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVC-- 184
             AA  IQ+ FRGYLAR+ALRALKG+VKLQAL+RG NVR+QA  TL+C+Q++V +QS+V   
Sbjct:   123 AAVVIQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSRVLDQ 182

Query:   185 AKRCQKAGSW-------HCD-ENKQLQTLRDK--IIKMDSSCQRRWDDSTLTKQEADAMF 234
              KR    GS        H   E++ LQ L D+  + +  SS    WDD   T      M 
Sbjct:   183 RKRLSHDGSRKSAFSDSHAVFESRYLQDLSDRQSMSREGSSAAEDWDDRPHTIDAVKVML 242

Query:   235 LSKKEAAIRRERIK-EYAFSHRKSADSEQNKVNGRWRYWLEQ 275
               +++ A+R ++     AFS +           G     LE+
Sbjct:   243 QRRRDTALRHDKTNLSQAFSQKMWRTVGNQSTEGHHEVELEE 284

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_scaffold_220000015 hypothetical protein (464 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	458
pfam13178	105	pfam13178, DUF4005, Protein of unknown function (D	4e-17

>gnl|CDD|221960 pfam13178, DUF4005, Protein of unknown function (DUF4005)

 Score = 76.4 bits (188), Expect = 4e-17
 Identities = 43/94 (45%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 331 SRRSLHRKQNSLGDEKSFASSPVVPTYMAATESAKAKARSMSSPKIRPGTFDSYSESYSP 390
           SR S      S  D+ S  SSP +P YMAATESAKAK RS S+P+ RP T     ES S 
Sbjct: 14  SRSSPSNPTKSERDDNSSTSSPSLPNYMAATESAKAKVRSQSAPRQRPET--EERESGSS 71

Query: 391 CKKKLSLMSSLTSEVPS-YSNIGRPSAYQQRSPS 423
             K+LSL  S +S   S  S          RSPS
Sbjct: 72  ATKRLSLPVSSSSGGSSSSSPRTSGGKGALRSPS 105

This is a C-terminal region of plant IQ-containing putative calmodulin-binding proteins. Length = 105

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	458
PF13178	102	DUF4005: Protein of unknown function (DUF4005)	99.55
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.76
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.16
smart00015	26	IQ Short calmodulin-binding motif containing conse	97.12
KOG0520	975	consensus Uncharacterized conserved protein, conta	95.16
PTZ00014	821	myosin-A; Provisional	95.03
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	94.54
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	91.82
COG5022	1463	Myosin heavy chain [Cytoskeleton]	90.52
KOG2128	1401	consensus Ras GTPase-activating protein family - I	89.64
smart00015	26	IQ Short calmodulin-binding motif containing conse	85.36

>PF13178 DUF4005: Protein of unknown function (DUF4005)

Probab=99.55  E-value=7.5e-15  Score=126.76  Aligned_cols=76  Identities=50%  Similarity=0.578  Sum_probs=54.5

Q ss_pred             CCCCCCCCCCCCccchhhhhhHHHhhhccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCC-CCCCCCCCC
Q 012665          343 GDEKSFASSPVVPTYMAATESAKAKARSMSSPKIRPGTFDSYSESYSPCKKKLSLMSSLTSEVPSYSNIG-RPSAYQQRS  421 (458)
Q Consensus       343 ~dD~Sl~ssp~~PsYMa~T~SakAK~Rs~S~PkqR~~~~~~~~~~~~~~kkRlS~p~s~~~~~~~~~~~g-~~s~~~~RS  421 (458)
                      ..++++. .  +|+|||+|||||||+|+||+||||++..+..  ...+.+||+|||...++...+..... ....++|||
T Consensus        26 ~~~~s~~-~--~PsYMa~TeSakAK~RsqSaPrqR~~~~~~~--~~~~~~kR~S~~~~~~~~~~~~~~~~~~~~~~~qrS  100 (102)
T PF13178_consen   26 CRRSSFG-S--LPSYMAATESAKAKARSQSAPRQRPGTPERA--EKQSSKKRLSLPGSSNSGSSSSRSPRTSSSSQSQRS  100 (102)
T ss_pred             cccCcCC-C--CCCccchhhhhhhhhhccCCcccCCCccccc--cccccccccccCCCCCCCcCCCCCCccccccccCCC
Confidence            3444444 2  9999999999999999999999999876643  45678999999976544443211111 234556999


Q ss_pred             CC
Q 012665          422 PS  423 (458)
Q Consensus       422 Ps  423 (458)
                      |+
T Consensus       101 ps  102 (102)
T PF13178_consen  101 PS  102 (102)
T ss_pred             CC
Confidence            86

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.76  E-value=2.9e-05  Score=48.88  Aligned_cols=20  Identities=60%  Similarity=0.783  Sum_probs=18.4

Q ss_pred             HHHHHHHHhhhhhHHHHHHH
Q 012665          126 LAATRIQSIFRGYLARKALR  145 (458)
Q Consensus       126 ~AAi~IQsafRGylARral~  145 (458)
                      .|||.||+.||||++|+.|+
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcC
Confidence            58999999999999999875

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.16  E-value=0.0011  Score=75.44  Aligned_cols=64  Identities=30%  Similarity=0.321  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHH-HhhhHHHHHHHhhhhHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 012665          124 RQLAATRIQSIFRGYLARKALR-ALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA  191 (458)
Q Consensus       124 ee~AAi~IQsafRGylARral~-alkglVrLQalvRG~~vRrqa~~tlr~~qa~v~iQs~vRa~r~r~~  191 (458)
                      ...+++.||..||||+.|+.|. ..++++.+|+++||.++|+   .++ ..-+++.+|..+|+...|+.
T Consensus       672 l~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~---~~~-~~~aai~~q~~~r~~~~r~~  736 (862)
T KOG0160|consen  672 LSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARR---ETE-REAAAIGIQKECRSYLNRRR  736 (862)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH---hhH-HHHHHHHhHHHHHHHHHHHH
Confidence            3445688999999999999998 5568899999999999999   222 66777888888887766654

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=97.12  E-value=0.00046  Score=45.47  Aligned_cols=22  Identities=50%  Similarity=0.659  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHH
Q 012665          124 RQLAATRIQSIFRGYLARKALR  145 (458)
Q Consensus       124 ee~AAi~IQsafRGylARral~  145 (458)
                      .+.+|+.||+.||||++|+.|+
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            4678999999999999999984

Calmodulin-binding motif.

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=95.16  E-value=0.016  Score=66.85  Aligned_cols=68  Identities=29%  Similarity=0.324  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhh-hHHHHHHHhhhhHHHHHHHHHHH-------HhhHHHHHHHHHHHhhhhhc
Q 012665          124 RQLAATRIQSIFRGYLARKALRALK-GIVKLQALIRGRNVRRQAFTTLK-------CLQSIVNIQSQVCAKRCQKA  191 (458)
Q Consensus       124 ee~AAi~IQsafRGylARral~alk-glVrLQalvRG~~vRrqa~~tlr-------~~qa~v~iQs~vRa~r~r~~  191 (458)
                      ...||..||.-||||+.|+.+..++ =+|++|+-|||+.+|+++.....       -+-++-++|+-+|+++.+..
T Consensus       809 ~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~  884 (975)
T KOG0520|consen  809 DPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRAL  884 (975)
T ss_pred             chhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccc
Confidence            4567799999999999999999655 69999999999999999973332       44566677777777776665

>PTZ00014 myosin-A; Provisional

Probab=95.03  E-value=0.039  Score=63.46  Aligned_cols=40  Identities=18%  Similarity=0.328  Sum_probs=35.3

Q ss_pred             HHHHHHHhhhhhHHHHHHH-HhhhHHHHHHHhhhhHHHHHH
Q 012665          127 AATRIQSIFRGYLARKALR-ALKGIVKLQALIRGRNVRRQA  166 (458)
Q Consensus       127 AAi~IQsafRGylARral~-alkglVrLQalvRG~~vRrqa  166 (458)
                      .++.||+++|||++|+.|. ...++++||+.+||+++++..
T Consensus       779 ~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~~  819 (821)
T PTZ00014        779 LVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAEI  819 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            5789999999999999998 566899999999999988754

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=94.54  E-value=0.12  Score=59.52  Aligned_cols=65  Identities=26%  Similarity=0.218  Sum_probs=52.0

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhhhHHHHHHHhhhhHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 012665          124 RQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA  191 (458)
Q Consensus       124 ee~AAi~IQsafRGylARral~alkglVrLQalvRG~~vRrqa~~tlr~~qa~v~iQs~vRa~r~r~~  191 (458)
                      ...+++.||..+||+++|+........+.+|..+|++..|+++   .....+++.+|+.+|+..+|..
T Consensus       695 ~r~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y---~~~~~~~~~~qs~~r~~~~r~e  759 (862)
T KOG0160|consen  695 LRSAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRY---RALIPASITIQSGVRAMLARNE  759 (862)
T ss_pred             HHHHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccc
Confidence            3456699999999999998222455778889999999999999   5556788899999999988874

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=91.82  E-value=0.19  Score=31.42  Aligned_cols=19  Identities=26%  Similarity=0.387  Sum_probs=16.9

Q ss_pred             hhHHHHHHHhhhhHHHHHH
Q 012665          148 KGIVKLQALIRGRNVRRQA  166 (458)
Q Consensus       148 kglVrLQalvRG~~vRrqa  166 (458)
                      +++|.||+.+||+++|+++
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~   20 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRY   20 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            5789999999999999986

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=90.52  E-value=0.51  Score=56.75  Aligned_cols=64  Identities=30%  Similarity=0.328  Sum_probs=47.4

Q ss_pred             HHHHHHHHHhhhhhHHHHHHH-HhhhHHHHHHHhhhhHHHHHHHHHHHHhhHHHHHHHHHHHhhhh
Q 012665          125 QLAATRIQSIFRGYLARKALR-ALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQ  189 (458)
Q Consensus       125 e~AAi~IQsafRGylARral~-alkglVrLQalvRG~~vRrqa~~tlr~~qa~v~iQs~vRa~r~r  189 (458)
                      ...+++||+++|||+.|+.+. +++.+-.+|.+.+|..+++.....+ -...+..+|..++...-|
T Consensus       745 ~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~r  809 (1463)
T COG5022         745 DNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYEL-KWRLFIKLQPLLSLLGSR  809 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccch-HHHhHHHhhHHhHHHhhH
Confidence            456899999999999999887 8899999999999988886653222 344556666666654433

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=89.64  E-value=0.8  Score=54.91  Aligned_cols=65  Identities=32%  Similarity=0.402  Sum_probs=53.7

Q ss_pred             HHHHHHHhhhhhHH---HH-HHH-HhhhHHHHHHHhhhhHHHHHHHHH----HHHhhHHHHHHHHHHHhhhhhc
Q 012665          127 AATRIQSIFRGYLA---RK-ALR-ALKGIVKLQALIRGRNVRRQAFTT----LKCLQSIVNIQSQVCAKRCQKA  191 (458)
Q Consensus       127 AAi~IQsafRGylA---Rr-al~-alkglVrLQalvRG~~vRrqa~~t----lr~~qa~v~iQs~vRa~r~r~~  191 (458)
                      .-+.||.+.|||+.   +. .+. ..+-+|++|++.||+++|+.+...    ..||...+.||+-+|.+..|..
T Consensus       567 ~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r~~  640 (1401)
T KOG2128|consen  567 FVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNRKD  640 (1401)
T ss_pred             hHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccchH
Confidence            45789999999993   22 233 677999999999999999998843    4599999999999999987755

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=85.36  E-value=0.88  Score=29.78  Aligned_cols=20  Identities=25%  Similarity=0.340  Sum_probs=17.6

Q ss_pred             hhhHHHHHHHhhhhHHHHHH
Q 012665          147 LKGIVKLQALIRGRNVRRQA  166 (458)
Q Consensus       147 lkglVrLQalvRG~~vRrqa  166 (458)
                      .+.++.||+.+||+.+|+++
T Consensus         3 ~~aa~~IQa~~Rg~~~r~~y   22 (26)
T smart00015        3 TRAAIIIQAAWRGYLARKRY   22 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHhh
Confidence            35789999999999999987

Calmodulin-binding motif.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	458
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	4e-10
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	8e-05
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	6e-04
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	4e-07
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	4e-07
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	7e-07
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	4e-05
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	5e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 65.6 bits (159), Expect = 2e-11
 Identities = 65/448 (14%), Positives = 130/448 (29%), Gaps = 145/448 (32%)

Query: 9   SLVRRLFISDPEKEKRKRCIFGRL---RIKSFASIAAATPLPSNDRTAVIEAEEEQNKHA 65
           S++ R++I   ++      +F +    R++ +  +          R A++E    +N   
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL----------RQALLELRPAKN--- 152

Query: 66  VSVAIASAIKAAH---------VAAEVVRLTGTPQSTNGCE------RQVEEDSSIEIKL 110
           V +                   VA +V   +   Q     +      +      ++   L
Sbjct: 153 VLI---------DGVLGSGKTWVALDVCL-SYKVQCKMDFKIFWLNLKNCNSPETV---L 199

Query: 111 DVAQS-PHQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTT 169
           ++ Q   +Q +      +        R +  +  LR L         ++ +         
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL---------LKSKPYEN----- 245

Query: 170 LKCLQSIV--NIQSQVCAKRCQKAGSWHCDENKQLQTLRDK----IIKMDSSCQRRWDD- 222
             CL  +V  N    V   +   A +  C   K L T R K     +   ++     D  
Sbjct: 246 --CL--LVLLN----VQNAKAWNAFNLSC---KILLTTRFKQVTDFLSAATTTHISLDHH 294

Query: 223 -STLTKQEADAMF---LSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVD 278
             TLT  E  ++    L  +   + RE +          A+S ++ +   W  W     D
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA-TWDNWKHVNCD 353

Query: 279 --TQVMKSKELEDLDS--------------------------IWTTANGNPRE-EYIGKG 309
             T +++S  L  L+                           IW   +    +   +   
Sbjct: 354 KLTTIIESS-LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF--DVIKSDVMVVVNK 410

Query: 310 LRLKNL------QTKYHIDGLDSPVLFS---RRSLHRKQNSLGDEKSFASSPVVPTYMAA 360
           L   +L      ++   I  +   +        +LHR               +V  Y   
Sbjct: 411 LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS--------------IVDHY--- 453

Query: 361 TESAKAKARSMSSPKIRPGTFDSYSESY 388
                   ++  S  + P   D Y  S+
Sbjct: 454 -----NIPKTFDSDDLIPPYLDQYFYSH 476

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 1e-04
 Identities = 40/288 (13%), Positives = 80/288 (27%), Gaps = 80/288 (27%)

Query: 202 LQTLRDKIIKMDSSCQRRWD--DSTLTKQEADAMFLSK-KEAAIRR--ERIKEYAFSHRK 256
           L    D  +  +  C+   D   S L+K+E D + +SK   +   R    +        +
Sbjct: 22  LSVFEDAFVD-NFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ 80

Query: 257 SADSEQNKVNGRWRY--WLEQWVDTQVMKSKELEDLDSIWTTANGNPREEYIGKGLRLKN 314
               E  ++N ++       +     +M    +E  D ++   N N              
Sbjct: 81  KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY---NDNQ------------- 124

Query: 315 LQTKYHIDGLDSPVLFSRRSLHRK-QNSLGDEKSFASSPVVPTY-MA-------ATESAK 365
           +  KY++         SR   + K + +L        +  V    +        A +   
Sbjct: 125 VFAKYNV---------SRLQPYLKLRQAL---LELRPAKNVLIDGVLGSGKTWVALDVCL 172

Query: 366 AKARSMSSPKIRPGTFDSYSESYSPCKKKLSLMSSLTSEVPSYSNIGRPSAYQQRSPSLK 425
           +              F  +  +   C    +++  L         I     +  RS    
Sbjct: 173 SYKVQCKMD------FKIFWLNLKNCNSPETVLEMLQK---LLYQIDPN--WTSRSDHSS 221

Query: 426 NVPGPIKSSRT-----------PKDL-------------SFDSKCSLL 449
           N+   I S +               L             +F+  C +L
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL 269

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 61.3 bits (149), Expect = 4e-10
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 3/146 (2%)

Query: 121 KEIRQLAATRIQSIFRGYLARKA-LRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNI 179
            +  + A  RIQ   RG+L RK  +R  +  + +Q  +RG   R    T L+  ++ + I
Sbjct: 764 ADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCY-ATFLRRTRAAIII 822

Query: 180 QSQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLSKKE 239
           Q        +K      D    LQ L    +  +       +  ++  Q+    +L++  
Sbjct: 823 QKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVH 882

Query: 240 -AAIRRERIKEYAFSHRKSADSEQNK 264
                +  +       R  A  E  K
Sbjct: 883 YHRTLKAIVYLQCCYRRMMAKRELKK 908

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 44.3 bits (105), Expect = 8e-05
 Identities = 38/172 (22%), Positives = 64/172 (37%), Gaps = 22/172 (12%)

Query: 124 RQLAATRIQSIFRGYLARKALRALK-GIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQ 182
           R  AA  IQ   R Y+ RK  + ++   + LQAL+RG  VR + +  +      + IQ  
Sbjct: 815 RTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNK-YQMMLREHKSIIIQKH 873

Query: 183 VCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTL--TKQEADAMFLSKKEA 240
           V     +                   I+ +    +R      L   K EA ++   KK  
Sbjct: 874 VRGWLAR----------VHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLH 923

Query: 241 AIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSKELEDLDS 292
                +I +     RK  +  +      ++  LE+  + ++  S E E L S
Sbjct: 924 IGLENKIMQL---QRKIDEQNK-----EYKSLLEKMNNLEITYSTETEKLRS 967

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 41.6 bits (98), Expect = 6e-04
 Identities = 28/137 (20%), Positives = 55/137 (40%), Gaps = 8/137 (5%)

Query: 117 HQCEKEIRQLAATRIQSIFRGYLARKALRA-LKGIVKLQALIRGRNVRRQAFTTLKCLQS 175
           ++ +  +R+  +  IQ   RG+LAR      LK IV LQ   R    +R+    LK    
Sbjct: 856 NKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELK-KLKIEAR 914

Query: 176 IVNIQSQVCAK---RCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADA 232
            V    ++      +  +      ++NK+ ++L +K+  ++ +         L       
Sbjct: 915 SVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTE--TEKLRSDVERL 972

Query: 233 MFLSKKEAAIRRERIKE 249
             +S++EA     R+  
Sbjct: 973 R-MSEEEAKNATNRVLS 988

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 51.6 bits (124), Expect = 4e-07
 Identities = 18/183 (9%), Positives = 48/183 (26%), Gaps = 24/183 (13%)

Query: 129 TRIQSIFRGYLARKA----LRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQ---- 180
            R   + +    ++A          I  +Q+ +      ++        Q +  ++    
Sbjct: 765 KRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKK-TEKPPKGQEVSELEAIYN 823

Query: 181 SQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQ----------RRWDDSTLTKQEA 230
           S     R  K   +          +      ++ + Q          +R     +  Q+ 
Sbjct: 824 SLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKY 883

Query: 231 DAMFLSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSKELEDL 290
           + +    +  A  +                    V  + +       + Q ++ +   DL
Sbjct: 884 NRILKKLENWATTKSVYLG-----SNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDL 938

Query: 291 DSI 293
            SI
Sbjct: 939 LSI 941

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 122 EIRQLAATRIQSIFRGYLARKA-LRALKGIVKLQALIRGRNVRRQA 166
           +  + A  RIQ   RG+L RK  L   +  + +Q  +RG   R  A
Sbjct: 2   DKLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYA 47

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 50.8 bits (122), Expect = 7e-07
 Identities = 17/196 (8%), Positives = 51/196 (26%), Gaps = 28/196 (14%)

Query: 121 KEIRQLAATRIQSIFRGYLARKALRALK----------GIVKLQALIRGRNVRR------ 164
           ++      T+   + R     + +   +           I  +Q+ +      +      
Sbjct: 759 EQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPP 818

Query: 165 --QAFTTLKCL-----QSIVNIQSQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQ 217
             Q  + L+ +       +  I+ +          +        L+    +  +      
Sbjct: 819 KGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIEL 878

Query: 218 RRWDDSTLTKQEADAMFLSKKEAAIRRERIKEYAFSHRKSADSEQNKVNGRWRYWLEQWV 277
           +R     +  Q+ + +    +  A  +                    V  + +       
Sbjct: 879 KRQKKIAVLLQKYNRILKKLENWATTKSVYLG-----SNETGDSITAVQAKLKNLEAFDG 933

Query: 278 DTQVMKSKELEDLDSI 293
           + Q ++ +   DL SI
Sbjct: 934 ECQSLEGQSNSDLLSI 949

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 45.2 bits (107), Expect = 4e-05
 Identities = 20/149 (13%), Positives = 45/149 (30%), Gaps = 4/149 (2%)

Query: 121 KEIRQLAATRIQSIFRGYLARKALRALK----GIVKLQALIRGRNVRRQAFTTLKCLQSI 176
                      Q+  RGYLARKA    +     I  +Q  +R                  
Sbjct: 788 DLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWPWMXLFFXIX 847

Query: 177 VNIQSQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLS 236
             ++     +  Q          ++ Q    ++ +++    +  ++  L +++  A    
Sbjct: 848 PLLKVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETEL 907

Query: 237 KKEAAIRRERIKEYAFSHRKSADSEQNKV 265
             EA   R R+        +     + ++
Sbjct: 908 YAEAEEMRVRLAAKKQELEEILHEMEARI 936

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837

 Score = 45.0 bits (107), Expect = 5e-05
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 4/43 (9%)

Query: 127 AATRIQSIFRGYLARKALRALK----GIVKLQALIRGRNVRRQ 165
             +  Q+  RGYL RKA + L+    G+  +Q  IR   V R 
Sbjct: 781 IISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 823

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	458
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	98.91
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.57
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.4
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.38
2l53_B	31	CAM, voltage-gated sodium channel type V alpha iso	97.92
2kxw_B	27	Sodium channel protein type 2 subunit alpha; actio	97.81
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	97.52
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	96.44
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	96.29
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	96.28
3gn4_A	148	Myosin-VI; unconventional myosin, motility, lever	96.25
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	96.24
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	96.09
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	95.89
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	93.55
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	91.49
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	89.92
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	83.32
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	82.78

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=98.91  E-value=2.6e-09  Score=81.54  Aligned_cols=53  Identities=28%  Similarity=0.407  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHhh-hHHHHHHHhhhhHHHHHHHHHHHHhhHH
Q 012665          123 IRQLAATRIQSIFRGYLARKALRALK-GIVKLQALIRGRNVRRQAFTTLKCLQSI  176 (458)
Q Consensus       123 ~ee~AAi~IQsafRGylARral~alk-glVrLQalvRG~~vRrqa~~tlr~~qa~  176 (458)
                      +.+.|||.||+.||||++|+.|..++ +++.||+.+||+.+|+.+ ..++...++
T Consensus         3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~~r~~~aA   56 (58)
T 2ix7_C            3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYA-KFLRRTKAA   56 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCc
Confidence            35789999999999999999999665 899999999999999999 455555554

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.57  E-value=8.4e-08  Score=70.32  Aligned_cols=41  Identities=24%  Similarity=0.372  Sum_probs=36.7

Q ss_pred             HHHHHHHHhhhhhHHHHHHHHhh---hHHHHHHHhhhhHHHHHH
Q 012665          126 LAATRIQSIFRGYLARKALRALK---GIVKLQALIRGRNVRRQA  166 (458)
Q Consensus       126 ~AAi~IQsafRGylARral~alk---glVrLQalvRG~~vRrqa  166 (458)
                      .|||.||+.+|||++|+.+..++   ..+.||+.+||+.+|+.+
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            47899999999999999998544   899999999999999876

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.40  E-value=4.7e-07  Score=103.75  Aligned_cols=69  Identities=29%  Similarity=0.262  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHH-hhhHHHHHHHhhhhHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 012665          122 EIRQLAATRIQSIFRGYLARKALRA-LKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA  191 (458)
Q Consensus       122 ~~ee~AAi~IQsafRGylARral~a-lkglVrLQalvRG~~vRrqa~~tlr~~qa~v~iQs~vRa~r~r~~  191 (458)
                      .+++.||++||+.||||++|+.|.. ..+++.||+.+||+.+|+++ ..++...+++.||+.+|++..|+.
T Consensus       813 lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~-~~lr~~~aav~IQ~~~Rg~l~R~~  882 (1080)
T 2dfs_A          813 LRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKY-QMMLREHKSIIIQKHVRGWLARVH  882 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTTTHHHHH
T ss_pred             cccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567899999999999999999994 55899999999999999988 445556677777777777766654

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.38  E-value=7.7e-07  Score=102.01  Aligned_cols=66  Identities=29%  Similarity=0.386  Sum_probs=60.0

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHh-hhHHHHHHHhhhhHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 012665          125 QLAATRIQSIFRGYLARKALRAL-KGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA  191 (458)
Q Consensus       125 e~AAi~IQsafRGylARral~al-kglVrLQalvRG~~vRrqa~~tlr~~qa~v~iQs~vRa~r~r~~  191 (458)
                      ..||+.||+.||||++|+.|+.+ .+++.||+.+||+.+|+.+ ..++...|++.||+.+|++.+|+.
T Consensus       768 ~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~lr~~~AAi~IQs~~Rg~~~Rk~  834 (1080)
T 2dfs_A          768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYA-TFLRRTRAAIIIQKFQRMYVVRKR  834 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcc-cccccchhHHHHHHHHhhHHHHHH
Confidence            56899999999999999999954 5899999999999999998 567889999999999999998876

>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}

Probab=97.92  E-value=5.1e-06  Score=56.66  Aligned_cols=23  Identities=30%  Similarity=0.465  Sum_probs=21.1

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHH
Q 012665          123 IRQLAATRIQSIFRGYLARKALR  145 (458)
Q Consensus       123 ~ee~AAi~IQsafRGylARral~  145 (458)
                      .||.+|+.||.|||+||.|+.+.
T Consensus         4 ~Ee~aA~vIQrA~R~yl~rr~~~   26 (31)
T 2l53_B            4 SEEVSAMVIQRAFRRHLLQRSLK   26 (31)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhc
Confidence            58999999999999999998865

>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}

Probab=97.81  E-value=6.2e-06  Score=54.62  Aligned_cols=22  Identities=27%  Similarity=0.510  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHH
Q 012665          123 IRQLAATRIQSIFRGYLARKAL  144 (458)
Q Consensus       123 ~ee~AAi~IQsafRGylARral  144 (458)
                      .||.||+.||.|||+||.|+.+
T Consensus         4 ~Ee~aA~vIQrA~R~yl~~~~~   25 (27)
T 2kxw_B            4 QEEVSAIVIQRAYRRYLLKQKV   25 (27)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            5899999999999999998753

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=97.52  E-value=0.00019  Score=52.26  Aligned_cols=43  Identities=16%  Similarity=0.142  Sum_probs=37.9

Q ss_pred             hhhHHHHHHHhhhhHHHHHHHHHHHHhhHHHHHHHHHHHhhhhh
Q 012665          147 LKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQK  190 (458)
Q Consensus       147 lkglVrLQalvRG~~vRrqa~~tlr~~qa~v~iQs~vRa~r~r~  190 (458)
                      .+.++.||+.+||.++|+++ ..++...+++.||+.+|++.+|+
T Consensus         3 r~a~i~iQ~~~Rg~l~R~~~-~~~~~~~aai~IQ~~~Rg~~~Rk   45 (48)
T 1n2d_C            3 SQAIKYLQNNIKGFIIRQRV-NDEMKVNCATLLQAAYRGHSIRA   45 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHHHH
Confidence            35789999999999999999 55667789999999999998875

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=96.44  E-value=0.0052  Score=46.32  Aligned_cols=42  Identities=17%  Similarity=0.237  Sum_probs=36.2

Q ss_pred             hhhHHHHHHHhhhhHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 012665          147 LKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA  191 (458)
Q Consensus       147 lkglVrLQalvRG~~vRrqa~~tlr~~qa~v~iQs~vRa~r~r~~  191 (458)
                      ...+|.||+.+||+.+|+.+.   +...+++.||+.+|++.+|+.
T Consensus         5 ~~aai~IQ~~~Rg~~~Rk~~~---~~r~aai~IQ~~~Rg~~aR~~   46 (58)
T 2ix7_C            5 RAACIRIQKTIRGWLLRKRYL---CMQRAAITVQRYVRGYQARCY   46 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence            357899999999999999993   344799999999999988866

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=96.29  E-value=0.0074  Score=46.56  Aligned_cols=38  Identities=39%  Similarity=0.493  Sum_probs=19.3

Q ss_pred             HHHHHHHhhhhhHHHHHHHHh----hhHHHHHHHhhhhHHHH
Q 012665          127 AATRIQSIFRGYLARKALRAL----KGIVKLQALIRGRNVRR  164 (458)
Q Consensus       127 AAi~IQsafRGylARral~al----kglVrLQalvRG~~vRr  164 (458)
                      ..+.||+..||||+|+.|..+    .++..||.-+|++..++
T Consensus         8 i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~   49 (64)
T 1wdc_A            8 IISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR   49 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            345666666666666665532    23444444444444443

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=96.28  E-value=0.0067  Score=46.71  Aligned_cols=41  Identities=24%  Similarity=0.064  Sum_probs=22.7

Q ss_pred             HHHHHHHhhhhHHHHHHHHHHHHhhHHHHHHHHHHHhhhhh
Q 012665          150 IVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQK  190 (458)
Q Consensus       150 lVrLQalvRG~~vRrqa~~tlr~~qa~v~iQs~vRa~r~r~  190 (458)
                      ++.+|+.+||+++|+.+...+...+|+..||..+|++...+
T Consensus         7 ~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr   47 (63)
T 2bl0_A            7 VKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK   47 (63)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            44455555555555555555555555556666666655443

>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}

Probab=96.25  E-value=0.0042  Score=56.28  Aligned_cols=35  Identities=26%  Similarity=0.469  Sum_probs=30.8

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHH-HhhhHHHHHHHh
Q 012665          123 IRQLAATRIQSIFRGYLARKALR-ALKGIVKLQALI  157 (458)
Q Consensus       123 ~ee~AAi~IQsafRGylARral~-alkglVrLQalv  157 (458)
                      -...|+|+||++.||||+|+.++ .+.|++++.+|.
T Consensus        43 yR~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~   78 (148)
T 3gn4_A           43 YRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK   78 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            35677899999999999999999 889999997764

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=96.24  E-value=0.0094  Score=45.96  Aligned_cols=44  Identities=23%  Similarity=0.114  Sum_probs=39.6

Q ss_pred             hhHHHHHHHhhhhHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 012665          148 KGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA  191 (458)
Q Consensus       148 kglVrLQalvRG~~vRrqa~~tlr~~qa~v~iQs~vRa~r~r~~  191 (458)
                      .-++.+|+.+||+++|+.+...+...+|+..||..+|++...+.
T Consensus         7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~   50 (64)
T 1wdc_A            7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN   50 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            45889999999999999999988889999999999999887654

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=96.09  E-value=0.0068  Score=46.66  Aligned_cols=41  Identities=22%  Similarity=0.190  Sum_probs=34.2

Q ss_pred             HHHHHHHHhhhhhHHHHHHHHh----hhHHHHHHHhhhhHHHHHH
Q 012665          126 LAATRIQSIFRGYLARKALRAL----KGIVKLQALIRGRNVRRQA  166 (458)
Q Consensus       126 ~AAi~IQsafRGylARral~al----kglVrLQalvRG~~vRrqa  166 (458)
                      ...+.||+..||||+|+.|..+    .++..||.-+|++..++.-
T Consensus         5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w   49 (63)
T 2bl0_A            5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW   49 (63)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            4569999999999999999844    4777889999998887754

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=95.89  E-value=0.0081  Score=67.43  Aligned_cols=41  Identities=37%  Similarity=0.417  Sum_probs=34.0

Q ss_pred             HHHHHHHHhhhhhHHHHHHHHh----hhHHHHHHHhhhhHHHHHH
Q 012665          126 LAATRIQSIFRGYLARKALRAL----KGIVKLQALIRGRNVRRQA  166 (458)
Q Consensus       126 ~AAi~IQsafRGylARral~al----kglVrLQalvRG~~vRrqa  166 (458)
                      .+|+.||+.+||||+|+.|+.+    .+++.||.-+||+++||..
T Consensus       780 ~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~  824 (837)
T 1kk8_A          780 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  824 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            4678999999999999999855    4788888888888888765

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=93.55  E-value=0.06  Score=62.24  Aligned_cols=41  Identities=29%  Similarity=0.245  Sum_probs=36.1

Q ss_pred             HHHHHHHHhhhhhHHHHHHHHh----hhHHHHHHHhhhhHHHHHH
Q 012665          126 LAATRIQSIFRGYLARKALRAL----KGIVKLQALIRGRNVRRQA  166 (458)
Q Consensus       126 ~AAi~IQsafRGylARral~al----kglVrLQalvRG~~vRrqa  166 (458)
                      .+++.||+.+|||++|+.|..+    .+++.||..+||+..+|..
T Consensus       793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~  837 (1184)
T 1i84_S          793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW  837 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            4679999999999999999854    4899999999999998764

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=91.49  E-value=0.14  Score=47.26  Aligned_cols=27  Identities=26%  Similarity=0.434  Sum_probs=23.4

Q ss_pred             hHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 012665          120 EKEIRQLAATRIQSIFRGYLARKALRA  146 (458)
Q Consensus       120 ~~~~ee~AAi~IQsafRGylARral~a  146 (458)
                      .+..|+.||+.||.+||.|+.|+.+..
T Consensus       125 ~~~~e~~aA~~IQra~R~~~~r~~~~~  151 (168)
T 4dck_A          125 RRKHEEVSAMVIQRAFRRHLLQRSLKH  151 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            456789999999999999999988764

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=89.92  E-value=0.51  Score=53.06  Aligned_cols=44  Identities=23%  Similarity=0.114  Sum_probs=38.8

Q ss_pred             hhHHHHHHHhhhhHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 012665          148 KGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA  191 (458)
Q Consensus       148 kglVrLQalvRG~~vRrqa~~tlr~~qa~v~iQs~vRa~r~r~~  191 (458)
                      +.++.||+.+||++.|+++...+....|++.||..+|++..++.
T Consensus       780 ~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~  823 (837)
T 1kk8_A          780 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN  823 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            35788999999999999997777778999999999999988765

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=83.32  E-value=1.7  Score=50.26  Aligned_cols=44  Identities=27%  Similarity=0.177  Sum_probs=38.5

Q ss_pred             hhHHHHHHHhhhhHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 012665          148 KGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA  191 (458)
Q Consensus       148 kglVrLQalvRG~~vRrqa~~tlr~~qa~v~iQs~vRa~r~r~~  191 (458)
                      ..++.||+.+||++.|+.+...+....+++.||+.+|++..++.
T Consensus       793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~  836 (1184)
T 1i84_S          793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH  836 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            35788999999999999998777788999999999999977653

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=82.78  E-value=0.86  Score=50.94  Aligned_cols=24  Identities=38%  Similarity=0.610  Sum_probs=21.0

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHhh
Q 012665          125 QLAATRIQSIFRGYLARKALRALK  148 (458)
Q Consensus       125 e~AAi~IQsafRGylARral~alk  148 (458)
                      ..+|+.||+++||||+|+.|+.++
T Consensus       768 ~~~~~~iQ~~~Rg~l~R~~~~~~r  791 (795)
T 1w7j_A          768 RAACIRIQKTIRGWLMRKKYMRMR  791 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            347899999999999999999765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	458
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	3e-05
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	4e-05
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	7e-04

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 44.3 bits (104), Expect = 3e-05
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 9/62 (14%)

Query: 121 KEIRQLAATRIQSIFRGYLARKALRALK----GIVKLQALIRGRNVRR-----QAFTTLK 171
            E      +  Q+  RGYL RKA + L+    G+  +Q  IR   V R     + ++ +K
Sbjct: 727 DERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWWKLYSKVK 786

Query: 172 CL 173
            L
Sbjct: 787 PL 788

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 43.6 bits (102), Expect = 4e-05
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 9/62 (14%)

Query: 121 KEIRQLAATRIQSIFRGYLARKALRAL----KGIVKLQALIRGRNVRR-----QAFTTLK 171
            +      T  Q+  RG+L R   RA+    + I  +Q  +R     +     + F  +K
Sbjct: 731 DDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPWMKLFFKIK 790

Query: 172 CL 173
            L
Sbjct: 791 PL 792

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 39.7 bits (92), Expect = 7e-04
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 123 IRQLAATRIQSIFRGYLARKALRALKGIVKLQALIR 158
            R+ +   IQ   R ++  K    +K   K++ L++
Sbjct: 759 ERRESIFCIQYNVRSFMNVKHWPWMKLFFKIKPLLK 794

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	458
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	96.58
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	96.31
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	92.44
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	88.22
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	87.2

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=96.58  E-value=0.00091  Score=71.85  Aligned_cols=43  Identities=35%  Similarity=0.410  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhh----hHHHHHHHhhhhHHHHHH
Q 012665          124 RQLAATRIQSIFRGYLARKALRALK----GIVKLQALIRGRNVRRQA  166 (458)
Q Consensus       124 ee~AAi~IQsafRGylARral~alk----glVrLQalvRG~~vRrqa  166 (458)
                      ...+|+.||+.+|||++|+.|+.+|    .++.+|..+||+.+||.+
T Consensus       730 l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~  776 (789)
T d1kk8a2         730 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  776 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            3557899999999999999998765    688889999999888876

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=96.31  E-value=0.0018  Score=69.59  Aligned_cols=42  Identities=26%  Similarity=0.256  Sum_probs=35.8

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHh----hhHHHHHHHhhhhHHHHHH
Q 012665          125 QLAATRIQSIFRGYLARKALRAL----KGIVKLQALIRGRNVRRQA  166 (458)
Q Consensus       125 e~AAi~IQsafRGylARral~al----kglVrLQalvRG~~vRrqa  166 (458)
                      ..+|+.||+.+|||++|+.|+.+    ..++.||+.+||+++||.+
T Consensus       735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            45789999999999999998743    3788899999999888876

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=92.44  E-value=0.11  Score=55.43  Aligned_cols=45  Identities=27%  Similarity=0.091  Sum_probs=39.6

Q ss_pred             hhhHHHHHHHhhhhHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 012665          147 LKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA  191 (458)
Q Consensus       147 lkglVrLQalvRG~~vRrqa~~tlr~~qa~v~iQs~vRa~r~r~~  191 (458)
                      .+.++.||+.+||+++|+++...++..+|++.||+.+|++..|+.
T Consensus       735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~  779 (794)
T d2mysa2         735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKH  779 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            356789999999999999998777778899999999999988755

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=88.22  E-value=0.37  Score=51.00  Aligned_cols=44  Identities=23%  Similarity=0.114  Sum_probs=37.1

Q ss_pred             hhHHHHHHHhhhhHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 012665          148 KGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA  191 (458)
Q Consensus       148 kglVrLQalvRG~~vRrqa~~tlr~~qa~v~iQs~vRa~r~r~~  191 (458)
                      +.++.||+.+||+.+|+++........+++.||+.+|++.+|+.
T Consensus       732 ~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~  775 (789)
T d1kk8a2         732 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN  775 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            46778899999999999996555556689999999999988865

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=87.20  E-value=0.18  Score=52.83  Aligned_cols=25  Identities=36%  Similarity=0.557  Sum_probs=20.9

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhh
Q 012665          124 RQLAATRIQSIFRGYLARKALRALK  148 (458)
Q Consensus       124 ee~AAi~IQsafRGylARral~alk  148 (458)
                      ...+||+||+.+||||+||.|..+|
T Consensus       705 l~~~~~~iQ~~~R~~l~Rk~~~r~r  729 (730)
T d1w7ja2         705 LRAACIRIQKTIRGWLMRKKYMRMR  729 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3457899999999999999988654