Citrus Sinensis ID: 012700

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------46
MAFQTQKPNLLVVYAPRVNNLLSFLTHCSTKPDTNTNNETDQDSTIEHNSNSKSNQGNAPSSSNSDEALGASLSPSNSSSSRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRWTGFSV
ccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccEEEccccccccccccccccEEEEEEcccccEEEEEEEEccccccccccEEEEEcccccEEEcccccccccccccEEccccccccccccccccccccEEEccccEEEEccEEEEEEEcccccccccccccccccccccccccEEcccccccccccccccccccEEEEEccccccEEEccccccccEEEcccccccccccccccEEEEEcccEEEEEEEEEcccccEEEEEEEEEccccccEEEcccEEcccccccccccEEEEEEEEEccccEEEEEEEEEcccccEEEEEEEEcccccccEEcccccEEEcccccccccccccccccEEEEEcccccEEEEEEEEEccccccEEEEEEEEccccccEEEEccccc
cccccccccccEEEccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccHcccccEEEEEEcccccEEEEEEEcccccccccccEEEEEccccEEEEEccccccccccccEEEccccccccEcccEcccccEEEEEcccccccccEEEEEEEcccccEEEEccccccccccccccccccccccccccccccEEEEccccEEEcccccEEEEEccccccccEEccccccccHHHcccccEEEEcccccEEEEEEccccccccEEEEEEEcccccEEEEccccccccccccHHHccccccEEEEEccccEEEEEEEEEcccccEEEEEEEccccccccEEcccccccccccccccccccccccccEEEEEcccccEEEEEEEEccccccEEEEEEEEccccccEEEEEccccc
mafqtqkpnllVVYAPRVNNLLSFLThcstkpdtntnnetdqdstiehnsnsksnqgnapsssnsdealgaslspsnssssrglvldlgstnswdsgeigspvvkrflgddeerwymwyhgnsgekpgsdsvglaissngihwergngpvrtsndvglvmncgkdwwafdtlsirpsevaIMSSNKVRASSAVYWLYYTgyssekmnfldydslefnlenperfqvgnllsgenglkrkinkslpglaisqdgrhwariegehhsgalfdvgsdedwdslfiaapqvvfhgngdlrmyyhsfdvekgefgigiarsrdgikwvklgkimgggirgsfdefgvkNACVARNKKDGKYLMAYEgvgadgsssiglavstgglkgwrrfqdnTMLKAEVeaedgwdnkgigspylvqmdgdsdeWRLYYRgignggrtGIGLAvsegsdvrkftrwtgfsv
mafqtqkpnllVVYAPRVNNLLSFLTHCSTKPDTNTNNETDQDSTIEHNSNSKSNQGNAPSSSNSDEALGASLspsnssssRGLVLDLGstnswdsgeigspvVKRFLGDDEERWYMWYHGnsgekpgsdSVGLAISSNgihwergngpvRTSNDVGLVMNCGKDWWAFDTLSIRPSEVAImssnkvrasSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGigiarsrdgikWVKLGKIMGGgirgsfdefgvKNACVARNKKDGKYLMAYEGvgadgsssIGLAVSTGGLKGWRRFQDNTMLKAEveaedgwdnkgigSPYLVQMDGDSDEWRLYYRGIGNGGRTgiglavsegsdvrkftrwtgfsv
MAFQTQKPNLLVVYAPRVNNLLSFLTHCSTKPDTNTNNETDQDSTIEHNSNSKSNQGNAPSSSNSDEALGAslspsnssssRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYrgignggrtgigLAVSEGSDVRKFTRWTGFSV
********NLLVVYAPRVNNLLSFLTHC*****************************************************************W**GEIGSPVVKRFLGDDEERWYMWYHGN**********GLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRWT****
**************APRVNNLLSFLTHCSTKPDTNTNNETDQDSTIEHNS****************************SSSRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRWTGFS*
MAFQTQKPNLLVVYAPRVNNLLSFLTHCSTKPDTNT***********************************************LVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRWTGFSV
******KPNLLVVYAPRVNNLLSFLTHCSTK*************************************************SRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRWTGFSV
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooo
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MAFQTQKPNLLVVYAPRVNNLLSFLTHCSTKPDTNTNNETDQDSTIEHNSNSKSNQGNAPSSSNSDEALGASLSPSNSSSSRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRWTGFSV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query458
225462906491 PREDICTED: uncharacterized protein LOC10 0.956 0.892 0.689 1e-168
255562934484 conserved hypothetical protein [Ricinus 0.965 0.913 0.690 1e-166
147816503531 hypothetical protein VITISV_039508 [Viti 0.901 0.777 0.683 1e-157
359496130503 PREDICTED: uncharacterized protein LOC10 0.903 0.823 0.606 1e-149
224143507343 predicted protein [Populus trichocarpa] 0.742 0.991 0.687 1e-146
356502565497 PREDICTED: uncharacterized protein LOC10 0.969 0.893 0.624 1e-145
357487181487 hypothetical protein MTR_5g042100 [Medic 0.969 0.911 0.624 1e-142
296090275454 unnamed protein product [Vitis vinifera] 0.840 0.848 0.581 1e-141
356494808499 PREDICTED: uncharacterized protein LOC10 0.980 0.899 0.618 1e-140
186478898444 Arabinanase/levansucrase/invertase [Arab 0.934 0.963 0.580 1e-139
>gi|225462906|ref|XP_002266397.1| PREDICTED: uncharacterized protein LOC100264211 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  597 bits (1538), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 311/451 (68%), Positives = 355/451 (78%), Gaps = 13/451 (2%)

Query: 10  LLVVYAPRVNNLLSFLTHCSTKPDTNTNNETDQDSTIEHNSNSKSNQGNAPSSSNSDEAL 69
           +L    P   N   +LT CST+PDT     TD++ST+  +SNS SN     S++ +    
Sbjct: 52  ILPTPHPNPRNCALYLTRCSTRPDT-----TDKNSTVGPSSNSNSNSKPQDSAAPASNES 106

Query: 70  GASLSPSNSSSSRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGS 129
            +S + + SSSSRGLV DLG +NSWDS +IGSPVVKRFL DDEERWYMWYHG S E   S
Sbjct: 107 LSSAAAAASSSSRGLVFDLGPSNSWDSAQIGSPVVKRFLSDDEERWYMWYHGASNENSAS 166

Query: 130 DSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRA 189
           DS+GLA+SSNG+HWERG GPVR+  DVGLVMNCGKDWWAFDT+SIRPS+V IMSSN+VR 
Sbjct: 167 DSIGLAVSSNGVHWERGGGPVRSGGDVGLVMNCGKDWWAFDTMSIRPSDVVIMSSNRVRG 226

Query: 190 SSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAI 249
           SSAVYWLYYTGYSSEK+ FLD DSLE  LENPER    N   GENG   KI KSLPGLAI
Sbjct: 227 SSAVYWLYYTGYSSEKVVFLD-DSLELYLENPERAGAEN---GENGGIGKIFKSLPGLAI 282

Query: 250 SQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEF 309
           SQDGRHWARIEGEHH+GALFDVG + +WDS++IA+PQVVFHGNGDLRMYYHSFDVE G+F
Sbjct: 283 SQDGRHWARIEGEHHTGALFDVGLENEWDSMYIASPQVVFHGNGDLRMYYHSFDVENGQF 342

Query: 310 GIGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSS 369
            IGIARS+DGI+WVKLGKIMGGGI GSFDE GV  ACV +N++DGKY+MAYEGV  +G  
Sbjct: 343 AIGIARSKDGIRWVKLGKIMGGGISGSFDESGVVKACVVKNRRDGKYVMAYEGVDGNGRR 402

Query: 370 SIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSD--EWRLYYR 427
           SIGLAVS  GLK WRR QD  +L      +DGWDNKG+GSP LVQMDGD D  EWRLYYR
Sbjct: 403 SIGLAVSPDGLKEWRRSQDEAVLMP--AEDDGWDNKGVGSPCLVQMDGDGDGGEWRLYYR 460

Query: 428 GIGNGGRTGIGLAVSEGSDVRKFTRWTGFSV 458
           GIG GGRTGIG+AV EGSD R+F +WTGF +
Sbjct: 461 GIGQGGRTGIGMAVCEGSDRRRFRKWTGFHL 491

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255562934|ref|XP_002522472.1| conserved hypothetical protein [Ricinus communis] gi|223538357|gb|EEF39964.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|147816503|emb|CAN72785.1| hypothetical protein VITISV_039508 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359496130|ref|XP_002266005.2| PREDICTED: uncharacterized protein LOC100260888 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224143507|ref|XP_002336049.1| predicted protein [Populus trichocarpa] gi|222869554|gb|EEF06685.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356502565|ref|XP_003520089.1| PREDICTED: uncharacterized protein LOC100794036 [Glycine max] Back     alignment and taxonomy information
>gi|357487181|ref|XP_003613878.1| hypothetical protein MTR_5g042100 [Medicago truncatula] gi|355515213|gb|AES96836.1| hypothetical protein MTR_5g042100 [Medicago truncatula] Back     alignment and taxonomy information
>gi|296090275|emb|CBI40094.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356494808|ref|XP_003516275.1| PREDICTED: uncharacterized protein LOC100819203 [Glycine max] Back     alignment and taxonomy information
>gi|186478898|ref|NP_001117357.1| Arabinanase/levansucrase/invertase [Arabidopsis thaliana] gi|16209661|gb|AAL14390.1| At1g26760/T24P13_13 [Arabidopsis thaliana] gi|22655318|gb|AAM98251.1| At1g26760/T24P13_13 [Arabidopsis thaliana] gi|332192608|gb|AEE30729.1| Arabinanase/levansucrase/invertase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query458
TAIR|locus:4515102593444 AT1G26761 "AT1G26761" [Arabido 0.801 0.826 0.626 2.6e-127
TAIR|locus:4515102593 AT1G26761 "AT1G26761" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1250 (445.1 bits), Expect = 2.6e-127, P = 2.6e-127
 Identities = 240/383 (62%), Positives = 286/383 (74%)

Query:    82 RGLVLDLG-STNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNG 140
             RGLV DLG S +SW S EIGSPVVKRFL D+EERWYMWYHG+S + P SDS+GLA+S+NG
Sbjct:    66 RGLVFDLGVSKDSWHSEEIGSPVVKRFLSDNEERWYMWYHGSSKQNPVSDSIGLAVSNNG 125

Query:   141 IHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTG 200
             IHWERGNG V +S DVGLVM+CG+DWW FDT S+RP EV IMSS+KVRA+S+VYW+YYTG
Sbjct:   126 IHWERGNGKVESSEDVGLVMSCGEDWWGFDTASVRPGEVVIMSSSKVRANSSVYWMYYTG 185

Query:   201 YSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKIN-KSLPGLAISQDGRHWARI 259
             Y+ E + F   D     L NPERF     L  EN  K ++  +SLPGLAISQDGRHWARI
Sbjct:   186 YTKETVEFQSQDFTSV-LGNPERFH----LCDENAEKSRVYYRSLPGLAISQDGRHWARI 240

Query:   260 EGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDG 319
             EGEHHSGALFDVGS++DWD L+IA+P VVFHG+GDLRMYYHSFD + GEF IG+ARSRDG
Sbjct:   241 EGEHHSGALFDVGSEKDWDFLYIASPHVVFHGDGDLRMYYHSFDEKTGEFCIGMARSRDG 300

Query:   320 IKWVKLGKIMGG------GIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGL 373
             IKW+KLGKI+GG      G+ G FDE G +  CV RNK+D  Y+MAYEGV   G +SIG 
Sbjct:   301 IKWLKLGKILGGRKSEKDGL-GFFDELGGRYPCVTRNKRDESYVMAYEGVDRTGKTSIGF 359

Query:   374 AVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSD-EWRLYYXXXXXX 432
             AVS  G+K W+R QD   + A  E    WDN+G+G PYL++MDGDSD +WRLYY      
Sbjct:   360 AVSKDGIKDWKRVQDEEAVIAVGEG-GAWDNEGVGCPYLIEMDGDSDHQWRLYYRGVGNG 418

Query:   433 XXXXXXLAVSEGSDVRKFTRWTG 455
                   LAVS+G+ +  FT+ TG
Sbjct:   419 GRTGIGLAVSQGNVITSFTKQTG 441


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.134   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      458       436   0.00088  118 3  11 23  0.46    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  303 KB (2152 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.91u 0.16s 40.07t   Elapsed:  00:00:01
  Total cpu time:  39.91u 0.16s 40.07t   Elapsed:  00:00:01
  Start:  Sat May 11 06:51:13 2013   End:  Sat May 11 06:51:14 2013
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query458
cd08979276 cd08979, GH_J, Glycosyl hydrolase families 32 and 4e-18
cd08979276 cd08979, GH_J, Glycosyl hydrolase families 32 and 2e-14
cd08979276 cd08979, GH_J, Glycosyl hydrolase families 32 and 2e-13
cd08979276 cd08979, GH_J, Glycosyl hydrolase families 32 and 7e-07
cd08993268 cd08993, GH43_DUF377, Glycosyl hydrolase family 43 7e-06
cd08993 268 cd08993, GH43_DUF377, Glycosyl hydrolase family 43 2e-05
cd08772286 cd08772, GH43_62_32_68, Glycosyl hydrolase familie 0.002
>gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J Back     alignment and domain information 
 Score = 84.0 bits (208), Expect = 4e-18
 Identities = 59/205 (28%), Positives = 84/205 (40%), Gaps = 24/205 (11%)

Query: 246 GLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVE 305
           G A S DG  W R        A    G    +D   +  P VV   +G  RM+Y  +D  
Sbjct: 36  GAASSDDGTWWTRPP------APLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYTGYDRP 89

Query: 306 KGE-FGIGIARSRDGIKWVKLGKIMGG-----GIRGSFDEFGVKNACVARNKKDGKYLMA 359
           KG    IG+A S+D I W K G          G  G +D+   ++  V R+++ G + M 
Sbjct: 90  KGAVQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMY 149

Query: 360 YEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDS 419
           Y    AD   +IGLA S   L  W      T +        G+D+  +  P +V++DG  
Sbjct: 150 YGARDADERGAIGLATSP-DLIHW------TPVPPPPGPRTGYDDGQLEVPQVVKIDGR- 201

Query: 420 DEWRLYY--RGIGNGGRTGIGLAVS 442
             W L Y  R         +G A+ 
Sbjct: 202 --WYLLYSGRNEDAKTGYRVGTALF 224

This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 276
>gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J Back     alignment and domain information
>gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J Back     alignment and domain information
>gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J Back     alignment and domain information
>gnl|CDD|185734 cd08993, GH43_DUF377, Glycosyl hydrolase family 43 containing a domain of unknown function Back     alignment and domain information
>gnl|CDD|185734 cd08993, GH43_DUF377, Glycosyl hydrolase family 43 containing a domain of unknown function Back     alignment and domain information
>gnl|CDD|185718 cd08772, GH43_62_32_68, Glycosyl hydrolase families: GH43, GH62, GH32, GH68 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 458
cd08993268 GH43_DUF377 Glycosyl hydrolase family 43 containin 99.97
PF04041312 DUF377: Domain of unknown function (DUF377); Inter 99.97
cd08994291 GH43_like_2 Glycosyl hydrolase 43-like family cons 99.95
cd08984294 GH43_5 Glycosyl hydrolase family 43. This glycosyl 99.93
cd08994291 GH43_like_2 Glycosyl hydrolase 43-like family cons 99.93
COG2152314 Predicted glycosylase [Carbohydrate transport and 99.93
cd08999287 GH43_ABN_2 Glycosyl hydrolase family 43. This glyc 99.92
cd08995280 GH32_Aec43_like Glycosyl hydrolase family 32. This 99.92
cd08772286 GH43_62_32_68 Glycosyl hydrolase families: GH43, G 99.92
cd08993268 GH43_DUF377 Glycosyl hydrolase family 43 containin 99.91
cd08979276 GH_J Glycosyl hydrolase families 32 and 68, which 99.91
cd08979276 GH_J Glycosyl hydrolase families 32 and 68, which 99.91
cd08991294 GH43_bXyl_2 Glycosyl hydrolase family 43. This gly 99.9
cd08992349 GH43_like_1 Glycosyl hydrolase family 43, uncharac 99.9
cd08995280 GH32_Aec43_like Glycosyl hydrolase family 32. This 99.89
cd08992 349 GH43_like_1 Glycosyl hydrolase family 43, uncharac 99.88
PF04616286 Glyco_hydro_43: Glycosyl hydrolases family 43; Int 99.88
cd08978271 GH_F Glycosyl hydrolase families 43 and 62 form CA 99.87
cd08996298 GH32_B_Fructosidase Glycosyl hydrolase family 32, 99.87
cd08998288 GH43_ABN_1 Glycosyl hydrolase family 43. This glyc 99.87
cd09004275 GH43_bXyl Glycosyl hydrolase family 43, includes m 99.86
cd08772286 GH43_62_32_68 Glycosyl hydrolase families: GH43, G 99.85
cd08990274 GH43_AXH_like Glycosyl hydrolase family 43, includ 99.85
cd08996298 GH32_B_Fructosidase Glycosyl hydrolase family 32, 99.85
cd08984294 GH43_5 Glycosyl hydrolase family 43. This glycosyl 99.84
TIGR01322 445 scrB_fam sucrose-6-phosphate hydrolase. 99.83
PF04041312 DUF377: Domain of unknown function (DUF377); Inter 99.82
cd08988279 GH43_ABN Glycosyl hydrolase family 43. This glycos 99.81
cd08999287 GH43_ABN_2 Glycosyl hydrolase family 43. This glyc 99.8
cd09000288 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy 99.8
cd08991294 GH43_bXyl_2 Glycosyl hydrolase family 43. This gly 99.8
TIGR01322 445 scrB_fam sucrose-6-phosphate hydrolase. 99.79
smart00640 437 Glyco_32 Glycosyl hydrolases family 32. 99.79
PF00251308 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t 99.79
cd08989269 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo 99.79
cd09003311 GH43_AXH_1 Glycosyl hydrolase family 43. This glyc 99.79
cd09002280 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy 99.79
cd08981291 GH43_2 Glycosyl hydrolase family 43. This glycosyl 99.78
cd08980288 GH43_1 Glycosyl hydrolase family 43. This glycosyl 99.77
PF00251308 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t 99.76
cd08986269 GH43_7 Glycosyl hydrolase family 43. This glycosyl 99.75
cd08978271 GH_F Glycosyl hydrolase families 43 and 62 form CA 99.75
cd09001269 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy 99.75
cd08985265 GH43_6 Glycosyl hydrolase family 43. This glycosyl 99.74
smart00640 437 Glyco_32 Glycosyl hydrolases family 32. 99.72
cd08990274 GH43_AXH_like Glycosyl hydrolase family 43, includ 99.72
cd08998288 GH43_ABN_1 Glycosyl hydrolase family 43. This glyc 99.72
PF04616286 Glyco_hydro_43: Glycosyl hydrolases family 43; Int 99.7
cd09004275 GH43_bXyl Glycosyl hydrolase family 43, includes m 99.66
cd08983276 GH43_4 Glycosyl hydrolase family 43. This glycosyl 99.66
cd08980288 GH43_1 Glycosyl hydrolase family 43. This glycosyl 99.64
cd08985265 GH43_6 Glycosyl hydrolase family 43. This glycosyl 99.63
cd08988279 GH43_ABN Glycosyl hydrolase family 43. This glycos 99.63
cd08981291 GH43_2 Glycosyl hydrolase family 43. This glycosyl 99.6
cd08997349 GH68 Glycosyl hydrolase family 68, includes levans 99.59
cd08997349 GH68 Glycosyl hydrolase family 68, includes levans 99.57
cd08986269 GH43_7 Glycosyl hydrolase family 43. This glycosyl 99.57
COG1621 486 SacC Beta-fructosidases (levanase/invertase) [Carb 99.56
cd08982295 GH43_3 Glycosyl hydrolase family 43. This glycosyl 99.54
cd08983276 GH43_4 Glycosyl hydrolase family 43. This glycosyl 99.53
cd09003311 GH43_AXH_1 Glycosyl hydrolase family 43. This glyc 99.53
cd09000288 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy 99.52
cd08989269 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo 99.5
cd09001269 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy 99.49
cd09002280 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy 99.44
COG2152314 Predicted glycosylase [Carbohydrate transport and 99.42
COG1621 486 SacC Beta-fructosidases (levanase/invertase) [Carb 99.34
cd08987303 GH62 Glycosyl hydrolase family 62, characterized a 99.34
KOG0228 571 consensus Beta-fructofuranosidase (invertase) [Car 99.18
cd08982295 GH43_3 Glycosyl hydrolase family 43. This glycosyl 99.15
cd08987303 GH62 Glycosyl hydrolase family 62, characterized a 99.12
KOG0228 571 consensus Beta-fructofuranosidase (invertase) [Car 99.1
COG3507 549 XynB Beta-xylosidase [Carbohydrate transport and m 99.05
PF13088275 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 98.86
PF13088275 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 98.78
COG3940324 Predicted beta-xylosidase [General function predic 98.65
COG3940324 Predicted beta-xylosidase [General function predic 98.47
PF02435428 Glyco_hydro_68: Levansucrase/Invertase; InterPro: 98.4
PF02435428 Glyco_hydro_68: Levansucrase/Invertase; InterPro: 98.26
COG3507 549 XynB Beta-xylosidase [Carbohydrate transport and m 98.16
cd00260351 Sialidase Sialidases or neuraminidases function to 97.91
cd00260 351 Sialidase Sialidases or neuraminidases function to 97.55
PF03664271 Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int 96.85
PF03664271 Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int 96.82
PF13810316 DUF4185: Domain of unknown function (DUF4185) 85.94
PF13859310 BNR_3: BNR repeat-like domain; PDB: 3B69_A. 83.63
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function Back     alignment and domain information 
Probab=99.97  E-value=7.8e-30  Score=250.49  Aligned_cols=257  Identities=20%  Similarity=0.302  Sum_probs=176.6

Q ss_pred             CCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcce
Q 012700          100 GSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEV  179 (458)
Q Consensus       100 ~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~~  179 (458)
                      ++|.|++    .+|+|||||++....  ....||+|+|.||+||++...++        ++.+.+  ..++..++     
T Consensus         1 ~nP~v~~----~~G~y~l~y~~~~~~--~~~~ig~A~S~Dg~~~~~~~~~~--------i~p~~~--~~~~~~gv-----   59 (268)
T cd08993           1 FNPAVVY----DNGEFYLLYRAAGND--GVIRLGLARSRDGLHFEIDPDPP--------VWPPPE--DGFEEGGV-----   59 (268)
T ss_pred             CcCeEEE----ECCEEEEEEEEECCC--CceEEEEEEECCCceEEECCcce--------EcCCCC--CcccccCc-----
Confidence            4799997    489999999987644  24789999999999999976543        233111  11333332     


Q ss_pred             eEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCCCceEe
Q 012700          180 AIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWARI  259 (458)
Q Consensus       180 ~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi~W~r~  259 (458)
                        .+|.+++ .+|+|||||++.....                                   ...+|++|+|+|+++|++.
T Consensus        60 --~dP~v~~-~~g~y~m~Yta~~~~~-----------------------------------~~~~i~lA~S~D~~~W~~~  101 (268)
T cd08993          60 --EDPRIVK-IDDTYYITYAARPNAP-----------------------------------NGTRIGLATTKDFITFERL  101 (268)
T ss_pred             --cCcEEEE-ECCEEEEEEEccCCCC-----------------------------------CCcEEEEEEeCCcceEEEe
Confidence              3444454 5889999999854210                                   0236999999999999997


Q ss_pred             ccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecC-CCCceEEEEEEcCCCCCceEcCeeeecCCCCCcc
Q 012700          260 EGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDV-EKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFD  338 (458)
Q Consensus       260 ~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~-~~g~~~I~~A~S~Dgi~W~~~~~vl~~~~~g~wD  338 (458)
                      .      .++.     +++...+..|..+   +|+|+|+|+.... ..+...|++|+|+|+++|+++++++.+ .+..||
T Consensus       102 ~------~~~~-----~~~~d~~~~p~~~---~g~y~m~~r~~~~~~~~~~~I~lA~S~Dl~~W~~~~~~~~~-~~~~wd  166 (268)
T cd08993         102 G------TSLV-----PNNRDGILFPEKI---NGKYVMLHRPFEYGGTSPPDMWLSFSPDLVHWGNHRFVLSP-RPNHWE  166 (268)
T ss_pred             c------ccCC-----CCCCCEEEeeEEE---CCEEEEEEccccCCCCCCCcEEEEECCCcCccCCCeEEecC-CCCcee
Confidence            3      2222     2334455566642   6999999975431 124578999999999999999888766 467899


Q ss_pred             CCCeee-cEEEEeccCCEEEEEEEeecCC--CCcEEEEEEeC--CCCCCcEEccCCeeeeecccCCCCCCC----Cceec
Q 012700          339 EFGVKN-ACVARNKKDGKYLMAYEGVGAD--GSSSIGLAVST--GGLKGWRRFQDNTMLKAEVEAEDGWDN----KGIGS  409 (458)
Q Consensus       339 ~~~v~~-P~V~~d~~~g~y~M~Y~g~~~~--g~~~Ig~A~S~--Dg~~~W~r~~~~pvL~~~~~~~~~wd~----~~v~~  409 (458)
                      +.+++. |..++  .++.|+|+|+|....  ..|++|+|+.+  |+.+.|.| ..+|||.|    +..|+.    .++.+
T Consensus       167 ~~~ig~g~~pi~--~~~g~l~~yhg~~~~~~~~Y~~g~~lld~~dp~~~~~~-~~~p~l~p----~~~~e~~G~~~~vvf  239 (268)
T cd08993         167 QLKIGAGTPPIK--TEEGWLVLYHGVDQSCGSVYRLGAALLDLEDPTKVIAR-SRRPLLEP----ETDYETGGFIPNVVF  239 (268)
T ss_pred             eceecCCCCCcC--cCCCEEEEEeccCCCCCcEEeeeEEEEcccCchHHhcc-cCCceecC----CcccccccccCCEEE
Confidence            988854 44564  455699999998754  57999999875  32223445 34799998    233433    33333


Q ss_pred             ceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEe
Q 012700          410 PYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSE  443 (458)
Q Consensus       410 P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~  443 (458)
                      |+-+..  .+|+++|||++++    ++||+|+++
T Consensus       240 ~~g~~~--~~~~~~iyyG~aD----~~~~~a~~~  267 (268)
T cd08993         240 PCGALE--KDGSVYIYYGAAD----TCIALATMA  267 (268)
T ss_pred             ECceEe--eCCEEEEEeccCc----eeEEEEEEe
Confidence            332222  2459999999987    999999875

This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety Back     alignment and domain information
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins Back     alignment and domain information
>cd08984 GH43_5 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins Back     alignment and domain information
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 Back     alignment and domain information
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 Back     alignment and domain information
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function Back     alignment and domain information
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J Back     alignment and domain information
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J Back     alignment and domain information
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins Back     alignment and domain information
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 Back     alignment and domain information
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins Back     alignment and domain information
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F Back     alignment and domain information
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases Back     alignment and domain information
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases Back     alignment and domain information
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 Back     alignment and domain information
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase Back     alignment and domain information
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases Back     alignment and domain information
>cd08984 GH43_5 Glycosyl hydrolase family 43 Back     alignment and domain information
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase Back     alignment and domain information
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety Back     alignment and domain information
>cd08988 GH43_ABN Glycosyl hydrolase family 43 Back     alignment and domain information
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase Back     alignment and domain information
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 Back     alignment and domain information
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase Back     alignment and domain information
>smart00640 Glyco_32 Glycosyl hydrolases family 32 Back     alignment and domain information
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] Back     alignment and domain information
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase Back     alignment and domain information
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase Back     alignment and domain information
>cd08981 GH43_2 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd08980 GH43_1 Glycosyl hydrolase family 43 Back     alignment and domain information
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] Back     alignment and domain information
>cd08986 GH43_7 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F Back     alignment and domain information
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase Back     alignment and domain information
>cd08985 GH43_6 Glycosyl hydrolase family 43 Back     alignment and domain information
>smart00640 Glyco_32 Glycosyl hydrolases family 32 Back     alignment and domain information
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase Back     alignment and domain information
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 Back     alignment and domain information
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases Back     alignment and domain information
>cd08983 GH43_4 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd08980 GH43_1 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd08985 GH43_6 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd08988 GH43_ABN Glycosyl hydrolase family 43 Back     alignment and domain information
>cd08981 GH43_2 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase Back     alignment and domain information
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase Back     alignment and domain information
>cd08986 GH43_7 Glycosyl hydrolase family 43 Back     alignment and domain information
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd08982 GH43_3 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd08983 GH43_4 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase Back     alignment and domain information
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase Back     alignment and domain information
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase Back     alignment and domain information
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase Back     alignment and domain information
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases Back     alignment and domain information
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd08982 GH43_3 Glycosyl hydrolase family 43 Back     alignment and domain information
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases Back     alignment and domain information
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A Back     alignment and domain information
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A Back     alignment and domain information
>COG3940 Predicted beta-xylosidase [General function prediction only] Back     alignment and domain information
>COG3940 Predicted beta-xylosidase [General function prediction only] Back     alignment and domain information
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions Back     alignment and domain information
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions Back     alignment and domain information
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF13810 DUF4185: Domain of unknown function (DUF4185) Back     alignment and domain information
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query458
3p2n_A 408 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p 5e-17
3p2n_A408 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p 5e-15
3p2n_A408 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p 5e-05
3qc2_A364 Glycosyl hydrolase; 5-bladed beta propeller fold, 8e-16
3qc2_A364 Glycosyl hydrolase; 5-bladed beta propeller fold, 9e-11
3qc2_A 364 Glycosyl hydrolase; 5-bladed beta propeller fold, 1e-08
3r4z_A 374 Glycosyl hydrolase family 32, N terminal; AGAR met 1e-15
3r4z_A374 Glycosyl hydrolase family 32, N terminal; AGAR met 9e-12
3r4z_A374 Glycosyl hydrolase family 32, N terminal; AGAR met 5e-05
1vkd_A338 Conserved hypothetical protein TM1225; structural 1e-14
1vkd_A 338 Conserved hypothetical protein TM1225; structural 8e-11
1vkd_A338 Conserved hypothetical protein TM1225; structural 2e-10
4ak5_A 404 Anhydro-alpha-L-galactosidase; hydrolase, marine g 1e-14
4ak5_A404 Anhydro-alpha-L-galactosidase; hydrolase, marine g 6e-12
4ak5_A404 Anhydro-alpha-L-galactosidase; hydrolase, marine g 4e-05
4ak5_A404 Anhydro-alpha-L-galactosidase; hydrolase, marine g 5e-04
3taw_A356 Hypothetical glycoside hydrolase; 5-bladed beta-pr 2e-14
3taw_A356 Hypothetical glycoside hydrolase; 5-bladed beta-pr 2e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 2e-04
3qz4_A311 Endo-1,4-beta-xylanase D; 5-bladed beta-propeller 7e-04
>3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Length = 408 Back     alignment and structure
 Score = 81.9 bits (201), Expect = 5e-17
 Identities = 43/239 (17%), Positives = 82/239 (34%), Gaps = 48/239 (20%)

Query: 248 AISQDGRHWARIEGE----HHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFD 303
           A S+    W    G              G     + +    P  +   NG   ++Y    
Sbjct: 57  AASKRALKWPTDLGNEWFIQFGPLQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKST 116

Query: 304 VEKGEFG---------------IGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVA 348
                FG               I  A S DG  W + G  +  G +G++D+  V    + 
Sbjct: 117 GPTQGFGGDIEKDKVFPWDRCDIWYATSEDGWTWKEEGPAVTRGEKGAYDDRSVFTVEIM 176

Query: 349 RNKKDGKYLMAYEGVGAD----GSSSIGLAVSTGGLKGWRRFQDNTMLKAE--------- 395
             K + KY + Y+ V +       + +GLA +      W + ++  +  A+         
Sbjct: 177 --KWEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPDGPWTKSEEPILSPADNGVWKGEEQ 234

Query: 396 ----VEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGN-------GGRTGIGLAVSE 443
               V  +  +D+  +  P ++   G   ++ LYY+G          G +   G+A+++
Sbjct: 235 DRFAVIKKGDFDSHKVHDPCIIPYKG---KFYLYYKGEQMGEAITFGGRQIRHGVAIAD 290
>3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Length = 408 Back     alignment and structure
>3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Length = 408 Back     alignment and structure
>3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 Back     alignment and structure
>3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 Back     alignment and structure
>3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 Back     alignment and structure
>3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Length = 374 Back     alignment and structure
>3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Length = 374 Back     alignment and structure
>3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Length = 374 Back     alignment and structure
>1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 Back     alignment and structure
>1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 Back     alignment and structure
>1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 Back     alignment and structure
>4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 Back     alignment and structure
>4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 Back     alignment and structure
>4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 Back     alignment and structure
>4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 Back     alignment and structure
>3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 Back     alignment and structure
>3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure
>3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} Length = 311 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query458
3qc2_A364 Glycosyl hydrolase; 5-bladed beta propeller fold, 100.0
3taw_A356 Hypothetical glycoside hydrolase; 5-bladed beta-pr 100.0
1vkd_A338 Conserved hypothetical protein TM1225; structural 99.97
3qc2_A364 Glycosyl hydrolase; 5-bladed beta propeller fold, 99.95
3taw_A356 Hypothetical glycoside hydrolase; 5-bladed beta-pr 99.94
3qz4_A311 Endo-1,4-beta-xylanase D; 5-bladed beta-propeller 99.91
3r4z_A374 Glycosyl hydrolase family 32, N terminal; AGAR met 99.91
3p2n_A408 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p 99.9
3kst_A306 Endo-1,4-beta-xylanase; structural genomics, joint 99.9
1vkd_A338 Conserved hypothetical protein TM1225; structural 99.9
4ak5_A404 Anhydro-alpha-L-galactosidase; hydrolase, marine g 99.88
1uv4_A293 Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy 99.88
3cu9_A314 Intracellular arabinanase; glycosyl hydrolase, hig 99.87
1gyh_A318 Arabinan endo-1,5-alpha-L-arabinosidase A; arabina 99.86
3p2n_A408 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p 99.86
1w2t_A 432 Beta fructosidase; hydrolase, glycosidase, inverta 99.86
3r4z_A 374 Glycosyl hydrolase family 32, N terminal; AGAR met 99.85
3qee_A307 Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 99.85
4ak5_A 404 Anhydro-alpha-L-galactosidase; hydrolase, marine g 99.85
1w2t_A 432 Beta fructosidase; hydrolase, glycosidase, inverta 99.83
3pij_A 526 Beta-fructofuranosidase; five-bladed beta-propelle 99.83
3c7f_A 487 Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- 99.82
3akh_A 468 Putative secreted alpha L-arabinofuranosidase II; 99.82
3cpn_A330 Beta-xylosidase, family 43 glycosyl hydrolase; str 99.82
1yif_A 533 Beta-1,4-xylosidase; glycosidase, xylan, structura 99.82
1yrz_A 528 Xylan beta-1,4-xylosidase; structural genomics, ny 99.8
2exh_A 535 Beta-D-xylosidase; glykosidase, hydrolsase, family 99.79
3c2u_A 538 Xylosidase/arabinosidase; tetramer, glycoside hydr 99.79
2x8s_A 470 Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 99.79
3qz4_A311 Endo-1,4-beta-xylanase D; 5-bladed beta-propeller 99.79
3pij_A 526 Beta-fructofuranosidase; five-bladed beta-propelle 99.79
1uv4_A293 Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy 99.78
3ugf_A 546 Sucrose:(sucrose/fructan) 6-fructosyltransferase; 99.78
1y4w_A 518 EXO-inulinase; glycoside hydrolase FAMI crystallog 99.78
3k1u_A330 Beta-xylosidase, family 43 glycosyl hydrolase; str 99.77
1st8_A 543 Fructan 1-exohydrolase IIA; five fold beta propell 99.77
2ac1_A 541 Invertase; five fold beta propeller, hydrolase; HE 99.77
2ac1_A 541 Invertase; five fold beta propeller, hydrolase; HE 99.77
3vsf_A 526 Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana 99.77
1gyh_A318 Arabinan endo-1,5-alpha-L-arabinosidase A; arabina 99.75
3kst_A306 Endo-1,4-beta-xylanase; structural genomics, joint 99.75
4ffh_A 492 Levan fructotransferase; glycoside hydrolase; HET: 99.75
3nqh_A 441 Glycosyl hydrolase; structural genomics, joint cen 99.74
3cu9_A314 Intracellular arabinanase; glycosyl hydrolase, hig 99.72
4ffh_A 492 Levan fructotransferase; glycoside hydrolase; HET: 99.72
3kf3_A 509 Invertase; GH32, glycoprotein, glycosidase, hydrol 99.72
3ugf_A 546 Sucrose:(sucrose/fructan) 6-fructosyltransferase; 99.7
1y4w_A 518 EXO-inulinase; glycoside hydrolase FAMI crystallog 99.7
3sc7_X 516 Inulinase; glycoside hydrolase family 32, glycosyl 99.7
3vsf_A 526 Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana 99.7
1st8_A 543 Fructan 1-exohydrolase IIA; five fold beta propell 99.69
3cpn_A330 Beta-xylosidase, family 43 glycosyl hydrolase; str 99.69
3nqh_A 441 Glycosyl hydrolase; structural genomics, joint cen 99.68
3kf3_A 509 Invertase; GH32, glycoprotein, glycosidase, hydrol 99.67
3qee_A307 Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 99.67
3lig_A 634 Fructosyltransferase; five bladed beta-propeller f 99.66
3sc7_X 516 Inulinase; glycoside hydrolase family 32, glycosyl 99.63
3zxk_A 542 Hiaxhd3; hydrolase, sugar binding protein; HET: XY 99.61
3akh_A 468 Putative secreted alpha L-arabinofuranosidase II; 99.6
1w18_A 493 Levansucrase; transferase, fructosyl transferase, 99.57
3c7f_A 487 Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- 99.55
1yif_A 533 Beta-1,4-xylosidase; glycosidase, xylan, structura 99.53
2x8s_A 470 Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 99.53
1yrz_A 528 Xylan beta-1,4-xylosidase; structural genomics, ny 99.52
2exh_A 535 Beta-D-xylosidase; glykosidase, hydrolsase, family 99.5
3c2u_A 538 Xylosidase/arabinosidase; tetramer, glycoside hydr 99.5
1w18_A493 Levansucrase; transferase, fructosyl transferase, 99.5
3lig_A 634 Fructosyltransferase; five bladed beta-propeller f 99.47
3k1u_A330 Beta-xylosidase, family 43 glycosyl hydrolase; str 99.45
1oyg_A447 Levansucrase; glycoside hydrolase, beta-propeller, 99.43
1oyg_A447 Levansucrase; glycoside hydrolase, beta-propeller, 99.37
3vss_A496 Beta-fructofuranosidase; glycoside hydrolase famil 99.34
2yfr_A571 Levansucrase, inulosucrase; fructosyltransferase, 99.31
3zxk_A 542 Hiaxhd3; hydrolase, sugar binding protein; HET: XY 99.23
2yfr_A 571 Levansucrase, inulosucrase; fructosyltransferase, 99.2
3vss_A 496 Beta-fructofuranosidase; glycoside hydrolase famil 99.18
2ydt_A367 EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 99.04
3a72_A355 EXO-arabinanase; arabinase, glycosyl hydrolase, hy 98.95
2ydt_A 367 EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 98.36
3a72_A355 EXO-arabinanase; arabinase, glycosyl hydrolase, hy 98.35
4fj6_A523 Glycoside hydrolase family 33, candidate sialidas; 98.26
4fj6_A523 Glycoside hydrolase family 33, candidate sialidas; 97.97
2w20_A471 Sialidase A; secreted, cell WALL, hydrolase, glyco 97.96
2xzi_A386 KDNAse, extracellular sialidase/neuraminidase, put 97.92
1w8o_A 601 Bacterial sialidase; 3D-structure, glycosidase, hy 97.56
2xzi_A386 KDNAse, extracellular sialidase/neuraminidase, put 97.42
2bf6_A449 Sialidase, EXO-alpha-sialidase; sialic acid, hydro 97.36
1so7_A382 Sialidase 2; neuraminidase, ganglioside, sugar-ind 97.28
1w0p_A781 Sialidase; hydrolase, neuraminidase, lectin; HET: 97.26
3sil_A379 Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1 97.26
1w8o_A 601 Bacterial sialidase; 3D-structure, glycosidase, hy 97.21
2w20_A471 Sialidase A; secreted, cell WALL, hydrolase, glyco 96.98
2bf6_A 449 Sialidase, EXO-alpha-sialidase; sialic acid, hydro 96.97
2sli_A679 Intramolecular trans-sialidase; hydrolase, neurami 96.55
3sil_A 379 Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1 96.54
2sli_A679 Intramolecular trans-sialidase; hydrolase, neurami 96.43
2jkb_A686 Sialidase B; intramolecular trans-sialidase, lyase 96.37
1ms9_A 648 Trans-sialidase; trans-glycosylation, protein-acrb 95.91
2jkb_A 686 Sialidase B; intramolecular trans-sialidase, lyase 95.65
1so7_A382 Sialidase 2; neuraminidase, ganglioside, sugar-ind 95.32
1w0p_A 781 Sialidase; hydrolase, neuraminidase, lectin; HET: 92.89
1ms9_A 648 Trans-sialidase; trans-glycosylation, protein-acrb 84.08
>3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Back     alignment and structure
Probab=100.00  E-value=1e-33  Score=287.33  Aligned_cols=280  Identities=19%  Similarity=0.226  Sum_probs=194.3

Q ss_pred             cceEEeCCCCC-----------CcccCCCCCcEEEEEccCCCCEEEEEEEEecCCCC----CcceEEEEecCCCCceeec
Q 012700           82 RGLVLDLGSTN-----------SWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKP----GSDSVGLAISSNGIHWERG  146 (458)
Q Consensus        82 ~gpVl~~~~~~-----------~wd~~~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~----~~~~IglA~S~Dg~~w~r~  146 (458)
                      .+|||.|.+..           .||+.+|.+|.|++    .+|+|||||++......    ...+||+|+|+||+||++.
T Consensus        25 ~~Pil~p~~~~~~~~~~~~~~~~wD~~gvfnp~ai~----~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DGi~w~~~  100 (364)
T 3qc2_A           25 VNPVISPIENTKFYCPLTKDSIAWESNDTFNPAATL----YNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQRE  100 (364)
T ss_dssp             TCCSBCCCSSCCEEETTTTEEECTTSSEEEEEEEEE----ETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSSSSCEEC
T ss_pred             CCCeEecCCcccccccccccccccccCceECceEEE----ECCEEEEEEEEECCCCcccCCCceEEEEEEeCCCceeeEc
Confidence            38999999877           89999999999997    48999999999976532    3478999999999999997


Q ss_pred             CCCccccCCcceeecCCCCccc-cc-cCCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccc
Q 012700          147 NGPVRTSNDVGLVMNCGKDWWA-FD-TLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERF  224 (458)
Q Consensus       147 ~~p~~~~~~~g~vl~~~~~w~~-fD-~~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~  224 (458)
                      .+|+         |.+...+.. ++ ..|       +.+|.+++.++|+|||+|++++..                    
T Consensus       101 ~~Pv---------l~P~~~~~~~~e~~~g-------v~DP~v~~~edG~yym~Yta~~~~--------------------  144 (364)
T 3qc2_A          101 KTPV---------FYPDNDSQKELEWPGG-------CEDPRIAVTDDGLYVMMYTQWNRH--------------------  144 (364)
T ss_dssp             SSCS---------BCCCSSTTHHHHTTTE-------EEEEEEEECTTSCEEEEEEEECSS--------------------
T ss_pred             CcCe---------EcCCCccccccccCCc-------EECCEEEEeCCCEEEEEEEecCCC--------------------
Confidence            5554         444322100 01 022       234555654589999999986531                    


Q ss_pred             cccccccCCcccccccccCcEEEEEeCCCCCceEeccccccCceEeCCC----CCCccCceee---------ecEEEEec
Q 012700          225 QVGNLLSGENGLKRKINKSLPGLAISQDGRHWARIEGEHHSGALFDVGS----DEDWDSLFIA---------APQVVFHG  291 (458)
Q Consensus       225 ~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~----~~~~d~~~i~---------~P~Vi~~~  291 (458)
                                       ..+|++|+|+|+++|++.      ++++.+..    ...+++....         .|.  + .
T Consensus       145 -----------------~~~i~lA~S~Dl~~W~k~------g~i~~p~~~g~f~~~~~kd~~i~~~~r~~~lfp~--k-i  198 (364)
T 3qc2_A          145 -----------------VPRLAVATSRNLKDWTKH------GPAFAKAFDGKFFNLGCKSGSILTEVVKGKQVIK--K-V  198 (364)
T ss_dssp             -----------------CEEEEEEEESSSSSCEEE------EETTSSHHHHTTTTCCCCCEEEEEEEETTEEEEC--E-E
T ss_pred             -----------------CeEEEEEEECCCCEEEEe------eeccCccccccccccccccceeeeeccccceeeE--E-E
Confidence                             126999999999999998      45554210    0112222211         122  2 3


Q ss_pred             CCeEEEEEEeecCCCCceEEEEEEcCCCCCceE-------cCeeeecCCCCCccCCCee-ecEEEEeccCCEEEEEEEee
Q 012700          292 NGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVK-------LGKIMGGGIRGSFDEFGVK-NACVARNKKDGKYLMAYEGV  363 (458)
Q Consensus       292 dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~W~~-------~~~vl~~~~~g~wD~~~v~-~P~V~~d~~~g~y~M~Y~g~  363 (458)
                      +|+|+|++.       ...|++|+|+|+++|++       +..++.+ +.+.||+..++ .|.+++  .+..|+|||+|+
T Consensus       199 ~GkY~M~~g-------~~~I~la~S~Dl~~W~~~~~~~g~~~~~~~~-~~~~wds~~ig~gp~pI~--t~~GwLl~YhGv  268 (364)
T 3qc2_A          199 NGKYFMYWG-------EEHVFAATSDDLIHWTPIVNIDGSLKKLFSP-RDGYFDSHLTECGPPAIY--TPKGIVLLYNGK  268 (364)
T ss_dssp             TTEEEEEEC-------SSSBEEEEESSSSSEEECBCTTSCBCCSBCC-CTTSSSSSEEEECSCEEE--ETTEEEEEEEEE
T ss_pred             CCEEEEEEc-------CCeEEEEeCCCcccceEccccCCCeeeeccC-CCChHhhcccccCCCcEE--cCCCEEEEEecc
Confidence            799999984       24699999999999987       2345555 46789999994 577787  788899999998


Q ss_pred             cC---------CCCcEEEEEEeCCCCCCcE--EccCCeeeeecccCCCCCC-CCceecceEEEECCCCCeEEEEEEeeeC
Q 012700          364 GA---------DGSSSIGLAVSTGGLKGWR--RFQDNTMLKAEVEAEDGWD-NKGIGSPYLVQMDGDSDEWRLYYRGIGN  431 (458)
Q Consensus       364 ~~---------~g~~~Ig~A~S~Dg~~~W~--r~~~~pvL~~~~~~~~~wd-~~~v~~P~v~~~~g~~g~~yL~Y~g~~~  431 (458)
                      ..         ...|++|+|+.+- -.+++  ....+|||.|+...|..-+ ..+|.+|+-...  .+++++|||+++| 
T Consensus       269 ~~~~~~~~~~~~~~Y~~g~~llD~-~dP~kvi~r~~~p~l~P~~~~E~~G~yv~nVvF~~G~~~--~~~~~~iyYG~aD-  344 (364)
T 3qc2_A          269 NHSGRGDKRYTANVYAAGQALFDA-NDPTRFITRLDEPFFRPMDSFEKSGQYVDGTVFIEGMVY--FKNKWYLYYGCAD-  344 (364)
T ss_dssp             CCTTTSCTTSCTTCEEEEEEEECS-SCTTCEEEECSSCSBCCCSGGGCCSSSTTCCEEEEEEEE--ETTEEEEEEEETT-
T ss_pred             cccccccccccCceEEEEEEEEcC-CCCceeEEcCCCceEcCCCccccCCCCcCCEEEeCCcEe--eCCEEEEEEeccc-
Confidence            74         2579999998852 22443  2356899999311122222 334555554333  1359999999998 


Q ss_pred             CCccEEEEEEEeC
Q 012700          432 GGRTGIGLAVSEG  444 (458)
Q Consensus       432 ~g~~~iGlA~~~~  444 (458)
                         +.||+|+++.
T Consensus       345 ---~~i~vA~~~~  354 (364)
T 3qc2_A          345 ---SKVGVAVYDP  354 (364)
T ss_dssp             ---TEEEEEEECT
T ss_pred             ---cEEEEEEECC
Confidence               9999999874
>3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Back     alignment and structure
>1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Back     alignment and structure
>3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Back     alignment and structure
>3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Back     alignment and structure
>3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Back     alignment and structure
>3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Back     alignment and structure
>3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Back     alignment and structure
>4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Back     alignment and structure
>1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 Back     alignment and structure
>3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A Back     alignment and structure
>1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* Back     alignment and structure
>3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Back     alignment and structure
>1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* Back     alignment and structure
>3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Back     alignment and structure
>3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* Back     alignment and structure
>4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Back     alignment and structure
>1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* Back     alignment and structure
>3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* Back     alignment and structure
>3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* Back     alignment and structure
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* Back     alignment and structure
>1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 Back     alignment and structure
>1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 Back     alignment and structure
>2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* Back     alignment and structure
>3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* Back     alignment and structure
>2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A Back     alignment and structure
>3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* Back     alignment and structure
>1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 Back     alignment and structure
>3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* Back     alignment and structure
>1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* Back     alignment and structure
>3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} Back     alignment and structure
>1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* Back     alignment and structure
>2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* Back     alignment and structure
>2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* Back     alignment and structure
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* Back     alignment and structure
>1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* Back     alignment and structure
>3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A Back     alignment and structure
>3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A Back     alignment and structure
>4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A Back     alignment and structure
>3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* Back     alignment and structure
>3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* Back     alignment and structure
>1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* Back     alignment and structure
>3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* Back     alignment and structure
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* Back     alignment and structure
>1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* Back     alignment and structure
>3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* Back     alignment and structure
>3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* Back     alignment and structure
>3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* Back     alignment and structure
>3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* Back     alignment and structure
>3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* Back     alignment and structure
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* Back     alignment and structure
>1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} Back     alignment and structure
>3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* Back     alignment and structure
>1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 Back     alignment and structure
>2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A Back     alignment and structure
>1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 Back     alignment and structure
>2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* Back     alignment and structure
>3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* Back     alignment and structure
>1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} Back     alignment and structure
>3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* Back     alignment and structure
>3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} Back     alignment and structure
>1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* Back     alignment and structure
>1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* Back     alignment and structure
>3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* Back     alignment and structure
>2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* Back     alignment and structure
>3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* Back     alignment and structure
>2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* Back     alignment and structure
>3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* Back     alignment and structure
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A Back     alignment and structure
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* Back     alignment and structure
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A Back     alignment and structure
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* Back     alignment and structure
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} Back     alignment and structure
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} Back     alignment and structure
>2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A* Back     alignment and structure
>2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* Back     alignment and structure
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* Back     alignment and structure
>2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* Back     alignment and structure
>2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* Back     alignment and structure
>1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A* Back     alignment and structure
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A* Back     alignment and structure
>3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A* Back     alignment and structure
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* Back     alignment and structure
>2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A* Back     alignment and structure
>2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* Back     alignment and structure
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* Back     alignment and structure
>3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A* Back     alignment and structure
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* Back     alignment and structure
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* Back     alignment and structure
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... Back     alignment and structure
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* Back     alignment and structure
>1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A* Back     alignment and structure
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A* Back     alignment and structure
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 458
d1vkda_327 b.67.2.4 (A:) Hypothetical protein TM1225 {Thermot 4e-11
d1vkda_327 b.67.2.4 (A:) Hypothetical protein TM1225 {Thermot 3e-06
d1vkda_ 327 b.67.2.4 (A:) Hypothetical protein TM1225 {Thermot 6e-06
>d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} Length = 327 Back     information, alignment and structure

class: All beta proteins
fold: 5-bladed beta-propeller
superfamily: Arabinanase/levansucrase/invertase
family: TM1225-like predicted glycosylases
domain: Hypothetical protein TM1225
species: Thermotoga maritima [TaxId: 2336]

 Score = 61.6 bits (149), Expect = 4e-11
 Identities = 44/210 (20%), Positives = 74/210 (35%), Gaps = 31/210 (14%)

Query: 246 GLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVE 305
               S+DG +W            +   + E +   +   P+VV   +     YY +F  +
Sbjct: 73  HFGRSKDGINWEI----EPEEIQWVDVNGEPFQPSYAYDPRVVKIEDT----YYITFCTD 124

Query: 306 KGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAY--EGV 363
                IG+  ++D   +V+L        R         N  +   K +GKY+M       
Sbjct: 125 DHGPTIGVGMTKDFKTFVRLPNAYVPFNR---------NGVLFPRKINGKYVMLNRPSDN 175

Query: 364 GADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIG-SPYLVQMDGDSDEW 422
           G      I L+ S   +  W   +          + + W+N  IG  PY ++     + W
Sbjct: 176 GHTPFGDIFLSESP-DMIHWGNHRFVLGRS----SYNWWENLKIGAGPYPIETS---EGW 227

Query: 423 RLYYRGI---GNGGRTGIGLAVSEGSDVRK 449
            L Y G+    NG     G A+ +  D  K
Sbjct: 228 LLIYHGVTLTCNGYVYSFGAALLDLDDPSK 257
>d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} Length = 327 Back     information, alignment and structure
>d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} Length = 327 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query458
d1vkda_327 Hypothetical protein TM1225 {Thermotoga maritima [ 100.0
d1vkda_327 Hypothetical protein TM1225 {Thermotoga maritima [ 99.9
d1uv4a1291 Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 99.83
d1uypa2294 Beta-fructosidase (invertase), N-terminal domain { 99.82
d1yrza2317 Beta-D-xylosidase N-terminal domain {Bacillus halo 99.82
d1y7ba2321 Beta-D-xylosidase N-terminal domain {Clostridium a 99.81
d2exha2322 Beta-D-xylosidase N-terminal domain {Geobacillus s 99.8
d1uypa2294 Beta-fructosidase (invertase), N-terminal domain { 99.77
d1uv4a1291 Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 99.77
d1wl7a1312 Arabinanase-TS {Bacillus thermodenitrificans [TaxI 99.77
d1gyha_318 alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 99.75
d1wl7a1312 Arabinanase-TS {Bacillus thermodenitrificans [TaxI 99.6
d1y4wa2353 Exo-inulinase {Aspergillus awamori [TaxId: 105351] 99.58
d1gyha_318 alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 99.57
d1yrza2317 Beta-D-xylosidase N-terminal domain {Bacillus halo 99.55
d2exha2322 Beta-D-xylosidase N-terminal domain {Geobacillus s 99.52
d1y7ba2321 Beta-D-xylosidase N-terminal domain {Clostridium a 99.52
d1y4wa2353 Exo-inulinase {Aspergillus awamori [TaxId: 105351] 99.52
d1oyga_440 Levansucrase {Bacillus subtilis [TaxId: 1423]} 99.47
d2b4wa1310 Hypothetical protein LmjF10.1260 {Leishmania major 99.36
d1oyga_440 Levansucrase {Bacillus subtilis [TaxId: 1423]} 99.16
d2b4wa1310 Hypothetical protein LmjF10.1260 {Leishmania major 98.09
d1w8oa3356 Micromonospora sialidase, N-terminal domain {Micro 97.8
d1w0pa3364 Vibrio cholerae sialidase {Vibrio cholerae [TaxId: 97.32
d2slia2483 Leech intramolecular trans-sialidase, C-terminal d 96.79
d3sila_379 Salmonella sialidase {Salmonella typhimurium, stra 96.77
d1so7a_374 Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9 96.46
d2slia2 483 Leech intramolecular trans-sialidase, C-terminal d 95.96
d1so7a_374 Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9 95.63
d1w8oa3 356 Micromonospora sialidase, N-terminal domain {Micro 95.28
d2ah2a2399 Trypanosoma sialidase {Parasitic flagellate protoz 95.25
d3sila_ 379 Salmonella sialidase {Salmonella typhimurium, stra 95.2
d2ah2a2399 Trypanosoma sialidase {Parasitic flagellate protoz 94.64
d1w0pa3364 Vibrio cholerae sialidase {Vibrio cholerae [TaxId: 91.98
>d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: All beta proteins
fold: 5-bladed beta-propeller
superfamily: Arabinanase/levansucrase/invertase
family: TM1225-like predicted glycosylases
domain: Hypothetical protein TM1225
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3e-34  Score=285.55  Aligned_cols=289  Identities=16%  Similarity=0.188  Sum_probs=205.7

Q ss_pred             cccceEEeCCCCCCcccCCCCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCccee
Q 012700           80 SSRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLV  159 (458)
Q Consensus        80 ~~~gpVl~~~~~~~wd~~~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~v  159 (458)
                      ...||||.+.+  .|.+..|+||.|++    .+|+|+|+|++.+....  ++||+|+|+||+||++..+|++.+.     
T Consensus        28 ~~~NPil~~~~--~~~~~~vfNp~~i~----~~g~~~ll~r~~~~~~~--~~ig~A~S~DGi~w~~~~~pv~~p~-----   94 (327)
T d1vkda_          28 YSKNPIIGRNP--VPKGARVFNSAVVP----YNGEFVGVFRIDHKNTR--PFLHFGRSKDGINWEIEPEEIQWVD-----   94 (327)
T ss_dssp             CTTCCSBCBSC--STTEEEEEEEEEEE----ETTEEEEEEEEEETTSC--EEEEEEEESSSSSCEECSSCCCEEC-----
T ss_pred             cCCCccccCCC--CcchhceeccEEEE----ECCEEEEEEEecCCCCc--eEEEEEEcCCccCCEeCCCCeecCC-----
Confidence            55689999864  36778899999998    49999999999876654  7899999999999999887764322     


Q ss_pred             ecCCCCccccccCCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccc
Q 012700          160 MNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRK  239 (458)
Q Consensus       160 l~~~~~w~~fD~~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  239 (458)
                          .+...++..|       +.+|.+++. +|+|||+|++...                                    
T Consensus        95 ----~~~~~~~~~g-------v~DPrv~~~-~d~yym~yt~~~~------------------------------------  126 (327)
T d1vkda_          95 ----VNGEPFQPSY-------AYDPRVVKI-EDTYYITFCTDDH------------------------------------  126 (327)
T ss_dssp             ----TTSCBCCCSS-------EEEEEEEEE-TTEEEEEEEEESS------------------------------------
T ss_pred             ----CCCcccccCc-------EEcceEEEE-CCEEEEEEEecCC------------------------------------
Confidence                2212233333       224445554 7899999997542                                    


Q ss_pred             cccCcEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCC-CCceEEEEEEcCC
Q 012700          240 INKSLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVE-KGEFGIGIARSRD  318 (458)
Q Consensus       240 ~~~~~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~-~g~~~I~~A~S~D  318 (458)
                        ..+|++|+|+|+++|++.+      +++.     .++......|..   .+|+|+|+++..... .....|++|.|+|
T Consensus       127 --~~~i~lA~S~D~~~w~k~g------~~~~-----~~~kd~~lfpek---i~Gky~ml~Rp~~~~~~~~~~I~la~S~D  190 (327)
T d1vkda_         127 --GPTIGVGMTKDFKTFVRLP------NAYV-----PFNRNGVLFPRK---INGKYVMLNRPSDNGHTPFGDIFLSESPD  190 (327)
T ss_dssp             --SEEEEEEEESSSSSEEEEC------CSSS-----SSEEEEEECSSC---BTTBEEEEEEECCSSSCSCCCEEEEEESS
T ss_pred             --CcEEEEEEecCcchheecC------CccC-----ccccCceEeeee---ccCeEEEEEeeccCCCcccceEEEEcCCC
Confidence              1259999999999999983      4432     234444445553   279999999875421 1224699999999


Q ss_pred             CCCceEcCeeeecCCCCCccCCCee-ecEEEEeccCCEEEEEEEeecCC---CCcEEEEEEeC--CCCCCcEEccCCeee
Q 012700          319 GIKWVKLGKIMGGGIRGSFDEFGVK-NACVARNKKDGKYLMAYEGVGAD---GSSSIGLAVST--GGLKGWRRFQDNTML  392 (458)
Q Consensus       319 gi~W~~~~~vl~~~~~g~wD~~~v~-~P~V~~d~~~g~y~M~Y~g~~~~---g~~~Ig~A~S~--Dg~~~W~r~~~~pvL  392 (458)
                      +++|+++..++.....+.||+..++ .|..++  .++.|+|+|+|....   ..|++|+|+.+  |+.+.+.| ..+|||
T Consensus       191 l~~W~~~~~v~~~~~~~~wd~~~vG~gpppI~--t~~Gwl~iYHgv~~~~~~~~Y~~g~~lld~~dP~kvi~r-~~~pil  267 (327)
T d1vkda_         191 MIHWGNHRFVLGRSSYNWWENLKIGAGPYPIE--TSEGWLLIYHGVTLTCNGYVYSFGAALLDLDDPSKVLYR-SRYYLL  267 (327)
T ss_dssp             SSCBEEEEEEECCCSSCGGGSSEEEECSCCEE--ETTEEEEEEEEEEEETTEEEEEEEEEEECSSCTTSEEEE-BSSCSB
T ss_pred             cccccccceecccCCCCceeeeeecCCCCcEE--ccCcEEEEEEeccccCCCcEEEEEEEEecCCCCceeEEc-CCCCeE
Confidence            9999999887766567889999886 466666  678899999998532   26999999875  43334444 568999


Q ss_pred             eecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCCCCcceEe
Q 012700          393 KAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTR  452 (458)
Q Consensus       393 ~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~dl~~w~~  452 (458)
                      .|+...+..-+..+|.+|+-....+++|+++|||+++|    +.||+|+++.++|.++.+
T Consensus       268 ~P~~~~E~~G~v~~VvF~~G~v~~~~~g~~~lYYG~aD----t~igvA~~~l~~ll~~l~  323 (327)
T d1vkda_         268 TPEEEYETVGFVPNVVFPCAALCDADTGRVAIYYGAAD----THVALAFGYIDEIVDFVK  323 (327)
T ss_dssp             CCCSHHHHSSSSSSBEEEEEEEECTTTCEEEEEEEETT----TEEEEEEEEHHHHHHHHH
T ss_pred             cCCCCceeeeecCCEEEeCCeEEECCCCEEEEEEEEcc----cEEEEEEEEHHHHHHHHH
Confidence            98211012223445666655333223579999999988    999999999888877654
>d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} Back     information, alignment and structure
>d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} Back     information, alignment and structure
>d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} Back     information, alignment and structure
>d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Back     information, alignment and structure
>d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} Back     information, alignment and structure
>d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Back     information, alignment and structure
>d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} Back     information, alignment and structure
>d1w0pa3 b.68.1.1 (A:217-346,A:544-777) Vibrio cholerae sialidase {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d2slia2 b.68.1.1 (A:277-759) Leech intramolecular trans-sialidase, C-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} Back     information, alignment and structure
>d1so7a_ b.68.1.1 (A:) Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2slia2 b.68.1.1 (A:277-759) Leech intramolecular trans-sialidase, C-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d1so7a_ b.68.1.1 (A:) Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} Back     information, alignment and structure
>d2ah2a2 b.68.1.1 (A:1-399) Trypanosoma sialidase {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]} Back     information, alignment and structure
>d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} Back     information, alignment and structure
>d2ah2a2 b.68.1.1 (A:1-399) Trypanosoma sialidase {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]} Back     information, alignment and structure
>d1w0pa3 b.68.1.1 (A:217-346,A:544-777) Vibrio cholerae sialidase {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure