Citrus Sinensis ID: 012839

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-----
Protein Sequence
MSKLKKQLSYISVPSQIINSLSSSSLQSLLVSPKKPSKSSFSRNSYKNPRFWFLTLFLVGLFGMLKLGFNLDPPIPFSPYPCFTTSPRDSFASNEQQNGQKDEILKGFNESQALVSKGFEDSEESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPGPEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEFPHLYNKEDLALPVTFSCLLMEEIWAMRFRDTGRMQGT
Secondary Structure (PSIPRED)
ccccccccEEEEcccHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHcccccccccHHcccccccccccccccccccccccccccccHHcccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHccEEccccccccccccccccccccccHHHHHHHcccccEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHcEEEEEcccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHccccccccHHHHHHHHHHcccccccccccccHHHHHccccccccHHHHHHHHHHcccccccEEEEEEccccccccccHHHHHHccccccccccccHHHccccccccHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEccHHHHHcccHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHEEEcccccccccccccccHHHHccHHHHHHHHHHHcEHHHcccHHHHcccccccccccccccHHHHHHHHHHHHHHccEEEEcccHHHHHccccHHHHHHEEHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEEEEEcccEEEEccccccccHHHHHHHHHHHHcccccccccccHHHHHHcccccccHHHHHHHHHHcccccccEEEEEEccccccHHHHHHHHHHccccccccccccHHHHHHHHHcHHHEEEcccccccccc
Coil and Loop (DISEMBL)
msklkkqlsyisVPSQIINSLSSSSLQsllvspkkpskssfsrnsyknprfWFLTLFLVGLFGMlklgfnldppipfspypcfttsprdsfasneqqngqkDEILKGFNESQALVskgfedseesefwkqpdgmgyrpclhfsreyRKYSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILqvnviwgdesefsdifdleHFKSVLANDvrivsslpsthimtrpveekrtplhvspqWIRARYLRRLNREGVLLLRGLdsrlskdlpsdLQKLRCKVAFHalrfappilQLGNKLAERmrskgpylslhLRMEKDVwvrtgclpgpeydemISNERKQRPELLTARSNMTYHERklaglcplnAVEVTRLLKALGAPKIARIYwaggeplggkeallplitefphlynkedlalpvtfSCLLMEEIWAMRFRdtgrmqgt
Flexible Loop (DISEMBL)
MSKLKKQLSYISVPSQIINSLSSSSLQSLLVspkkpskssfsrnsyknpRFWFLTLFLVGLFGMLKLGFNLDPPIPFSPYPCFTTSPRDSFASNEQQNGQKDEILKGFNESQALVSkgfedseesefwkqpdgmgyrpCLHFSREYRKYSNAIVKDRRKYLLVVVsggmnqqrnQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVsslpsthimtrpveekrtplhvspqwiRARYLRRLNREGVLLLrgldsrlskdlpSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLslhlrmekdvwVRTGCLpgpeydemisnerkQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEFPHLYNKEDLALPVTFSCLLMEEIWAMRFRdtgrmqgt
Low Complexity Region (SEG)
MSKLKKQLSYIsvpsqiinslsssslqsllvspkkpskssfsrnsYKNPRFWFLTLFLVGLFGMLKLGFNLDPPIPFSPYPCFTTSPRDSFASNEQQNGQKDEILKGFNESQALVSKGFEDSEESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPGPEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEFPHLYNKEDLALPVTFSCLLMEEIWAMRFRDTGRMQGT
Disordered region (IsUnstruct)
***********************************************NPRFWFLTLFLVGLFGMLKLGFNLDPPIPFSPYPCFT*******************************************WKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPGPEY*******************NMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEFPHLYNKEDLALPVTFSCLLMEEIWAMRFR********
Disordered Region (DISOPRED)
************VPSQIIN**************************YKNPRFWFLTLFLVGLFGMLKLGFNLDPPIP*******************************************************DGMGYRPCLH*****************KYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHI*********TPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPGPEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEFPHLYNKEDLALPVTFSCLLMEEIWAMRFRDTGRM***
Disordered Region (DISEMBL)
********SYISVPSQIINSLSSSS******************NSYKNPRFWFLTLFLVGLFGMLKLGFNLDPPIPFSPYPCFTTSPRDSFASNEQQNGQKDEILKGFNESQALV*************KQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPGPEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEFPHLYNKEDLALPVTFSCLLMEEIWAMRFRDTGRMQGT
Disordered Region (DISPRO)
*****KQLSYISVPSQIINSLS*****S***********SFSRNSYKNPRFWFLTLFLVGLFGMLKLGFNLDPPIPFSPYPCFTTSPRDSFASNE******************************EFWKQPDGMGYRPCLHFSRE***YSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPGPEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEFPHLYNKEDLALPVTFSCLLMEEIWAMRFRDT******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSKLKKQLSYISVPSQIINSLSSSSLQSLLVSPKKPSKSSFSRNSYKNPRFWFLTLFLVGLFGMLKLGFNLDPPIPFSPYPCFTTSPRDSFASNEQQNGQKDEILKGFNESQALVSKGFEDSEESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPGPEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEFPHLYNKEDLALPVTFSCLLMEEIWAMRFRDTGRMQGT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	455	2.2.26 [Sep-21-2011]
Q8W486	519	Uncharacterized protein A	no	no	0.637	0.558	0.350	7e-46

>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1

 Score =  185 bits (469), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 161/305 (52%), Gaps = 15/305 (4%)

Query: 126 EFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVIARI 185
           E W+     G+RP    S   R       K+   YL V  +GG+NQQR+ I +AV+ ARI
Sbjct: 61  ELWESAKSGGWRP----SSAPRSDWPPPTKETNGYLRVRCNGGLNQQRSAICNAVLAARI 116

Query: 186 LGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHIMTRPVEEK-- 243
           + A LV+P L  N  W D+S F  I+D+EHF   L  DV+IV  +P  H   +  + K  
Sbjct: 117 MNATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPDVHKNGKTKKIKAF 176

Query: 244 --RTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPS-DLQKLRCKVAFHALRFA 300
             R P     +W     L+ +     + L     RL++++ + + Q+LRC+V +HALRF 
Sbjct: 177 QIRPPRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFK 236

Query: 301 PPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLP--GPEYDEMISNERKQRPELL 358
           P I++L   + +++RS+G ++S+HLR E D+    GC     PE  +++   RK+     
Sbjct: 237 PHIMKLSESIVDKLRSQGHFMSIHLRFEMDMLAFAGCFDIFNPEEQKILRKYRKEN---- 292

Query: 359 TARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEF 418
            A   + Y+ER+  G CPL   EV  +L+A+      RIY A GE  GG++ + P  T F
Sbjct: 293 FADKRLIYNERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLF 352

Query: 419 PHLYN 423
           P L N
Sbjct: 353 PRLDN 357

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	455
255559237	589	conserved hypothetical protein [Ricinus	0.931	0.719	0.740	0.0
224104545	570	predicted protein [Populus trichocarpa]	0.929	0.742	0.760	1e-177
225450232	536	PREDICTED: DUF246 domain-containing prot	0.881	0.748	0.766	1e-177
449501615	572	PREDICTED: DUF246 domain-containing prot	0.934	0.743	0.721	1e-174
15224887	573	axi 1 protein-like protein [Arabidopsis	0.927	0.736	0.743	1e-173
297824475	576	hypothetical protein ARALYDRAFT_483577 [	0.923	0.729	0.737	1e-172
224121002	435	predicted protein [Populus trichocarpa]	0.696	0.728	0.869	1e-160
449463801	556	PREDICTED: DUF246 domain-containing prot	0.905	0.741	0.675	1e-156
357457469	600	Growth regulator like protein [Medicago	0.914	0.693	0.663	1e-156
356532281	552	PREDICTED: DUF246 domain-containing prot	0.916	0.755	0.708	1e-156

>gi|255559237|ref|XP_002520639.1| conserved hypothetical protein [Ricinus communis] gi|223540159|gb|EEF41735.1| conserved hypothetical protein [Ricinus communis]

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/462 (74%), Positives = 383/462 (82%), Gaps = 38/462 (8%)

Query: 6   KQLSYISVPSQIINSLSSSSLQSLLVSPKKPSKSSFSRNS-YKNPRFWFLTLFLVGLFGM 64
           K++SYISVPSQ+INSLSSSSLQ+LL+SPKKPS++ F   S +K+P+ WF  LF+ G  GM
Sbjct: 9   KKVSYISVPSQVINSLSSSSLQTLLLSPKKPSRNKFLNWSLFKSPKVWFFALFIFGFLGM 68

Query: 65  LKLGFNLDPPIPFSPYPCFTTSPRD-SF-----------ASNEQQNGQKDE-----ILKG 107
           L+L F+LDP +P   YPC T+  +D SF           ASN   N  KD+      +KG
Sbjct: 69  LRLWFDLDPLVPLYSYPCVTSQTQDNSFSNGYSGSKLASASNVDINSLKDQKDGFATIKG 128

Query: 108 FN----------------ESQALVSKGFEDSE--ESEFWKQPDGMGYRPCLHFSREYRKY 149
            N                +S++L+S  +E SE  ESEFWKQPDG+GY+PCL FS+EYR+ 
Sbjct: 129 SNSVVGLALINERLGDNEKSKSLISNRYETSEGEESEFWKQPDGLGYKPCLDFSKEYRRG 188

Query: 150 SNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSD 209
           S  +VKDRRKYL+VVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSD
Sbjct: 189 SELVVKDRRKYLIVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSD 248

Query: 210 IFDLEHFKSVLANDVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLL 269
           IFDLE+FK VLANDVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYL+RLNREGVLL
Sbjct: 249 IFDLEYFKRVLANDVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLKRLNREGVLL 308

Query: 270 LRGLDSRLSKDLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEK 329
           LRGLDSRLSKDLPSDLQKLRCKVAFHAL FAP IL+LGNKLAERMRSKGPYL+LHLRMEK
Sbjct: 309 LRGLDSRLSKDLPSDLQKLRCKVAFHALIFAPSILELGNKLAERMRSKGPYLALHLRMEK 368

Query: 330 DVWVRTGCLPG--PEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLK 387
           DVWVRTGCLPG  P+YDE+IS+ERK+RPELLT RSNMTYHE+KLAGLCPLNA+EVTRLLK
Sbjct: 369 DVWVRTGCLPGLSPKYDEIISDERKRRPELLTGRSNMTYHEKKLAGLCPLNALEVTRLLK 428

Query: 388 ALGAPKIARIYWAGGEPLGGKEALLPLITEFPHLYNKEDLAL 429
           ALGAP  ARIYWAGG+PLGGKEALLP+  EFPH YNKEDLAL
Sbjct: 429 ALGAPSDARIYWAGGQPLGGKEALLPITNEFPHFYNKEDLAL 470

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104545|ref|XP_002313473.1| predicted protein [Populus trichocarpa] gi|222849881|gb|EEE87428.1| predicted protein [Populus trichocarpa]

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 336/442 (76%), Positives = 370/442 (83%), Gaps = 19/442 (4%)

Query: 6   KQLSYISVPSQIINSLSSSSLQSLLVSPKKPSKSSF-SRNSYKNPRFWFLTLFLVGLFGM 64
           K++SYISVPSQIINSLSSSSLQSLL+ PKKPS + F     +++PRFWFL LFL G  G 
Sbjct: 9   KKVSYISVPSQIINSLSSSSLQSLLIPPKKPSANRFFGLKWFRSPRFWFLALFLCGFLGT 68

Query: 65  LKLGFNLDPPIPFSPYPCFT-------------TSPRDSFASNEQQNGQKD-EILKGFNE 110
           LKL + LDP IPFSPYPC T             T  +  F SN+++N +KD E LKG  +
Sbjct: 69  LKLWYTLDPLIPFSPYPCVTRQSQLQESFSNGHTRQQLGFVSNDERNDKKDQESLKGVVD 128

Query: 111 SQALVSKGFEDSEESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMN 170
            Q  +S G E  EESEFWKQPDG+GY+PCL FS +YR+ S  I +DRRKYLLVVVSGGMN
Sbjct: 129 FQGGISGGVE--EESEFWKQPDGLGYKPCLKFSSDYRRGSELIFEDRRKYLLVVVSGGMN 186

Query: 171 QQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSL 230
           QQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDL +FK VLANDVRIVSSL
Sbjct: 187 QQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLANFKRVLANDVRIVSSL 246

Query: 231 PSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRC 290
           PS H+  RPV E RTPLHVSPQWIRARYL+RLNREGVLLLRGLDSRLSKDLPSDLQKLRC
Sbjct: 247 PSYHLTRRPVVESRTPLHVSPQWIRARYLKRLNREGVLLLRGLDSRLSKDLPSDLQKLRC 306

Query: 291 KVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPG--PEYDEMIS 348
           KVAFHALRFAPP+L+LGNKLAERM+SKGPYL+LHLRME DVWVRTGC PG   +YDE+I+
Sbjct: 307 KVAFHALRFAPPVLELGNKLAERMQSKGPYLALHLRMELDVWVRTGCQPGLSHDYDEIIN 366

Query: 349 NERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGK 408
            ERKQRPELLTA+SNMT HERKLAGLCPLNA+EV RLLKALGAPK ARIYWAGG+PLGGK
Sbjct: 367 KERKQRPELLTAKSNMTCHERKLAGLCPLNALEVARLLKALGAPKSARIYWAGGQPLGGK 426

Query: 409 EALLPLITEFPHLYNKEDLALP 430
           EALLPL  EFP+ YNKEDLALP
Sbjct: 427 EALLPLTREFPNFYNKEDLALP 448

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450232|ref|XP_002266606.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis vinifera] gi|297736200|emb|CBI24838.3| unnamed protein product [Vitis vinifera]

 Score =  626 bits (1615), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 335/437 (76%), Positives = 365/437 (83%), Gaps = 36/437 (8%)

Query: 6   KQLSYISVPSQIINSLSSSSLQSLLVSPKKPSKSSFSRNSYK--NPRFWFLTLFLVGLFG 63
           K++SYISVPSQIINSLSSSSLQSLLVSPKK S+SS    S+   NPR WFL  FL G   
Sbjct: 5   KKVSYISVPSQIINSLSSSSLQSLLVSPKKSSRSSSKFFSFLFKNPRLWFLAFFLFGFIA 64

Query: 64  MLKLGFNLDPPIPFSPYPCFTTSPRDSFASNEQQNGQKDEILKGFNESQALVSKGF---- 119
           MLK+GFNL+P IPFSP PC                        G  +SQ +VS G     
Sbjct: 65  MLKMGFNLEPLIPFSPNPC------------------------GITQSQGIVSAGSLSSH 100

Query: 120 ----EDSEESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQQRNQ 175
               ED E+SEFW+QPDG+GYRPCL FS+EY+K S  IV+DR KYL+VVVSGGMNQQRNQ
Sbjct: 101 LGVKEDGEKSEFWEQPDGLGYRPCLEFSKEYKKTSLEIVEDRTKYLMVVVSGGMNQQRNQ 160

Query: 176 IVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHI 235
           IVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFD+EHFK VLANDVRIVSSLPSTH+
Sbjct: 161 IVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDMEHFKRVLANDVRIVSSLPSTHL 220

Query: 236 MTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFH 295
           M+RPVEEKRTPLHVSPQWIRARYL+RL REGVLLLRGLDSRLSKDLPSDLQKLRCKVAFH
Sbjct: 221 MSRPVEEKRTPLHVSPQWIRARYLKRLRREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFH 280

Query: 296 ALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPG--PEYDEMISNERKQ 353
           ALRF+ PIL+LGNK+AERMRSKGPYL+LHLRMEKDVWVRTGCLPG   +YDE+I+NERK 
Sbjct: 281 ALRFSQPILELGNKMAERMRSKGPYLALHLRMEKDVWVRTGCLPGLSSQYDEIINNERKL 340

Query: 354 RPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLP 413
           RPELLTARSNMTYHERKLAGLCPLNA+EVTRLLKALGAPK ARIYWAGG+P GG+EALLP
Sbjct: 341 RPELLTARSNMTYHERKLAGLCPLNALEVTRLLKALGAPKSARIYWAGGQPFGGEEALLP 400

Query: 414 LITEFPHLYNKEDLALP 430
           L  EFP+ YNKEDLALP
Sbjct: 401 LTREFPNFYNKEDLALP 417

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449501615|ref|XP_004161417.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus]

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 322/446 (72%), Positives = 363/446 (81%), Gaps = 21/446 (4%)

Query: 6   KQLSYISVPSQIINSLSSSSLQSLLVSPKKPSKSS---FSRNSYKNP-RFWFLTLFLVGL 61
           K+ +YISVPSQIINSLSSSSLQSLL SPKK SK+     S ++Y++  + W L +FL GL
Sbjct: 9   KKQAYISVPSQIINSLSSSSLQSLLDSPKKSSKNYNKFLSLSTYRSSNKLWLLAIFLFGL 68

Query: 62  FGMLKLGFNLDPPIPFSPYPCFTTS-----------PRDSFASNEQQNGQKDEILKGFNE 110
           FGMLKL FN +P IP+  YPCFT+             +      +++N  KDE+     +
Sbjct: 69  FGMLKLTFNPNPLIPYVSYPCFTSQWQSQGLVSNGVLKSGLIDRDRENALKDEVTSDSFQ 128

Query: 111 SQALVSKGF----EDSEESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVS 166
           S   +S G     E +E+ EFWKQPDG+GY+PCL FS EY+K +  IV +R KYL+VVVS
Sbjct: 129 SLRPISTGVLKSDEGNEQGEFWKQPDGLGYKPCLDFSEEYKKSTTGIVSERTKYLMVVVS 188

Query: 167 GGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRI 226
           GGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFK+VLA+DV I
Sbjct: 189 GGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKNVLADDVHI 248

Query: 227 VSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQ 286
           VSSLPSTH+MTRPVEEK  P HVSP WIR+RYLR+L REGVLLLRGLDSRLSKDLPSDLQ
Sbjct: 249 VSSLPSTHLMTRPVEEKSPPHHVSPSWIRSRYLRKLRREGVLLLRGLDSRLSKDLPSDLQ 308

Query: 287 KLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPG--PEYD 344
           KLRCKVAFHALRFAPPI++LGNKL ERMRSKGPYL+LHLRMEKDVWVRTGCLPG  PEYD
Sbjct: 309 KLRCKVAFHALRFAPPIVELGNKLTERMRSKGPYLALHLRMEKDVWVRTGCLPGLSPEYD 368

Query: 345 EMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEP 404
           EMI+NER +RPELLTARSNM+YH+RKLAGLCPLNA EV RLLKALGAP   RIYWAGG+P
Sbjct: 369 EMINNERIRRPELLTARSNMSYHDRKLAGLCPLNAYEVMRLLKALGAPGDTRIYWAGGQP 428

Query: 405 LGGKEALLPLITEFPHLYNKEDLALP 430
           LGGKEAL PL  EFP+ YNKEDLALP
Sbjct: 429 LGGKEALQPLTGEFPNFYNKEDLALP 454

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15224887|ref|NP_181978.1| axi 1 protein-like protein [Arabidopsis thaliana] gi|13877693|gb|AAK43924.1|AF370605_1 axi 1 protein-like protein [Arabidopsis thaliana] gi|3128192|gb|AAC16096.1| similar to axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gi|330255336|gb|AEC10430.1| axi 1 protein-like protein [Arabidopsis thaliana]

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 325/437 (74%), Positives = 366/437 (83%), Gaps = 15/437 (3%)

Query: 8   LSYISVPSQIINSLSSSSLQSLLVSPKKPSKSS--FSRNSYKNPRFWFLTLFLVGLFGML 65
           +SYISVPSQIINSLSSSSLQSLLVSPKK S+S+  FS  SY+NPR WF TLFLV LFGML
Sbjct: 17  VSYISVPSQIINSLSSSSLQSLLVSPKKSSRSTNRFSF-SYRNPRIWFFTLFLVSLFGML 75

Query: 66  KLGFNLDP-PIPFSPYPCFTTSPRDSF-----ASNEQQNGQKDEILKGFNESQALVSKGF 119
           KLGFN+DP  +PFS YPC TT    SF     A++     Q+  +  G + S A++    
Sbjct: 76  KLGFNVDPISLPFSRYPCSTTQQPLSFDGEQNAASHLGLAQEPILSTGSSNSNAIIQLNG 135

Query: 120 EDSE----ESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQQRNQ 175
             +E    E +FWKQPDG+G++PCL F+ +YRK SN+I+K+R KYLLVVVSGGMNQQRNQ
Sbjct: 136 GKNETLLTEGDFWKQPDGLGFKPCLGFTSQYRKDSNSILKNRWKYLLVVVSGGMNQQRNQ 195

Query: 176 IVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHI 235
           IVDAVVIARILGA+LVVP+LQVNVIWGDESEF+DIFDLEHFK VLA+DV IVSSLPSTH+
Sbjct: 196 IVDAVVIARILGASLVVPVLQVNVIWGDESEFADIFDLEHFKDVLADDVHIVSSLPSTHV 255

Query: 236 MTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFH 295
           MTRPVEEKRTPLH SPQWIRA YL+R+NRE VLLLRGLDSRLSKDLPSDLQKLRCKVAF 
Sbjct: 256 MTRPVEEKRTPLHASPQWIRAHYLKRINRERVLLLRGLDSRLSKDLPSDLQKLRCKVAFQ 315

Query: 296 ALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPG--PEYDEMISNERKQ 353
           ALRF+P IL+LGNKLA RMR++G YLSLHLRMEKDVWVRTGCLPG  PEYDE++++ER++
Sbjct: 316 ALRFSPRILELGNKLASRMRNQGQYLSLHLRMEKDVWVRTGCLPGLTPEYDEIVNSERER 375

Query: 354 RPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLP 413
            PELLT RSNMTYHERKLAGLCPL A+EVTRLLKAL APK ARIYWAGGEPLGGKE L P
Sbjct: 376 HPELLTGRSNMTYHERKLAGLCPLTALEVTRLLKALEAPKDARIYWAGGEPLGGKEVLEP 435

Query: 414 LITEFPHLYNKEDLALP 430
           L  EFP  YNK DLALP
Sbjct: 436 LTKEFPQFYNKHDLALP 452

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824475|ref|XP_002880120.1| hypothetical protein ARALYDRAFT_483577 [Arabidopsis lyrata subsp. lyrata] gi|297325959|gb|EFH56379.1| hypothetical protein ARALYDRAFT_483577 [Arabidopsis lyrata subsp. lyrata]

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 323/438 (73%), Positives = 362/438 (82%), Gaps = 18/438 (4%)

Query: 8   LSYISVPSQIINSLSSSSLQSLLVSPKKPSKS----SFSRNSYKNPRFWFLTLFLVGLFG 63
           +SYISVPSQIINSLSSSSLQSLLVSPKK S+S    SFS   Y+NPR WF TLFLV LFG
Sbjct: 17  VSYISVPSQIINSLSSSSLQSLLVSPKKSSRSINRFSFS---YRNPRIWFFTLFLVSLFG 73

Query: 64  MLKLGFNLDP-PIPFSPYPCFTTSPR--DSFASNEQQNG--QKDEILKGFNESQALVSKG 118
           MLKLGFN+DP  +PFS YPC T  P   D   + E   G  Q+  +  G + S  ++   
Sbjct: 74  MLKLGFNVDPISLPFSRYPCSTNHPLSFDGEQNAESHLGLVQESNLAPGSSNSNGIIQLD 133

Query: 119 FEDSE----ESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQQRN 174
              +E    E +FWKQPDG+G++PCL F+ +YR+ SN+I+K+R KYLLVVVSGGMNQQRN
Sbjct: 134 GGKNETLLTEGDFWKQPDGLGFKPCLGFTSQYRRDSNSILKNRWKYLLVVVSGGMNQQRN 193

Query: 175 QIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTH 234
           QIVDAVVIARILGA+LVVP+LQVNVIWGDESEF+DIFDLEHFK VLA+DV IVSSLPSTH
Sbjct: 194 QIVDAVVIARILGASLVVPVLQVNVIWGDESEFADIFDLEHFKDVLADDVHIVSSLPSTH 253

Query: 235 IMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAF 294
           +MTRPVEEKRTPLH SPQWIRA YL+R+NRE VLLLRGLDSRLSKDLPSDLQKLRCKVAF
Sbjct: 254 VMTRPVEEKRTPLHASPQWIRAHYLKRINRERVLLLRGLDSRLSKDLPSDLQKLRCKVAF 313

Query: 295 HALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPG--PEYDEMISNERK 352
            ALRF+P IL+LGNKLA RMR++G YLSLHLRMEKDVWVRTGCLPG  PEYDE++++ER+
Sbjct: 314 QALRFSPRILELGNKLASRMRNQGQYLSLHLRMEKDVWVRTGCLPGLTPEYDEIVNSERE 373

Query: 353 QRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALL 412
             PELLT RSNMTYHERKLAGLCPL A+EVTRLLKAL APK ARIYWAGGEPLGGKE L 
Sbjct: 374 AHPELLTGRSNMTYHERKLAGLCPLTALEVTRLLKALEAPKNARIYWAGGEPLGGKEVLE 433

Query: 413 PLITEFPHLYNKEDLALP 430
           PL  EFP  YNK DLALP
Sbjct: 434 PLTKEFPQFYNKHDLALP 451

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121002|ref|XP_002330879.1| predicted protein [Populus trichocarpa] gi|222872701|gb|EEF09832.1| predicted protein [Populus trichocarpa]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 279/321 (86%), Positives = 295/321 (91%), Gaps = 4/321 (1%)

Query: 112 QALVSKGFEDSEESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQ 171
           Q  +S G E  EESEFWKQPDG+GY+PCL FSREY ++S  IVK+RRKYLLVVVSGGMNQ
Sbjct: 1   QGGISGGVE--EESEFWKQPDGLGYKPCLKFSREYSRWSELIVKNRRKYLLVVVSGGMNQ 58

Query: 172 QRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLP 231
           QRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFK VLANDVRIVSSLP
Sbjct: 59  QRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKRVLANDVRIVSSLP 118

Query: 232 STHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCK 291
           STHI TRPV E RTPLHVSPQWIRARYL+RLNREGVLLLRGLDSRLSKDLPSDLQKLRCK
Sbjct: 119 STHITTRPVVESRTPLHVSPQWIRARYLKRLNREGVLLLRGLDSRLSKDLPSDLQKLRCK 178

Query: 292 VAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPG--PEYDEMISN 349
           VAF+ALRFAPP+L+LGNKLAERMRSKGPYL+LHLRME DVWVRTGC PG   EYDE+I+N
Sbjct: 179 VAFNALRFAPPVLELGNKLAERMRSKGPYLALHLRMELDVWVRTGCQPGLSHEYDEIINN 238

Query: 350 ERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKE 409
           ERKQRPELLTARSNMTYHERKLAGLCPLNA+EV RLLKALGAP+  RIYWAGG+PLGGKE
Sbjct: 239 ERKQRPELLTARSNMTYHERKLAGLCPLNAMEVARLLKALGAPRSTRIYWAGGQPLGGKE 298

Query: 410 ALLPLITEFPHLYNKEDLALP 430
           AL PL  EFPH YNKEDLALP
Sbjct: 299 ALQPLTREFPHFYNKEDLALP 319

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463801|ref|XP_004149620.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus]

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 304/450 (67%), Positives = 346/450 (76%), Gaps = 38/450 (8%)

Query: 2   SKLKKQLSYISVPSQIINSLSSSSLQSLLVSPKKPSKSS---FSRNSYKNP-RFWFLTLF 57
           S  KKQ +YISVPSQIINSLSSSSLQSLL SPKK SK+     S ++Y++  + W L +F
Sbjct: 6   SNSKKQ-AYISVPSQIINSLSSSSLQSLLDSPKKSSKNYNKFLSLSTYRSSNKLWLLAIF 64

Query: 58  LVGLFGMLKLGFNLDPPIPFSPYPCFTTS-----------PRDSFASNEQQNGQKDEILK 106
           L GLFGMLKL FN +P IP+  YPCFT+             +      +++N  KDE+  
Sbjct: 65  LFGLFGMLKLTFNPNPLIPYVSYPCFTSQWQSQGLVSNGVLKSGLIDRDRENALKDEVTS 124

Query: 107 GFNESQALVSKGF----EDSEESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLL 162
              +S   +S G     E +E+ EFWKQPDG+GY+PCL FS EY+K +  IV +R KYL+
Sbjct: 125 DSFQSLRPISTGVLKSDEGNEQGEFWKQPDGLGYKPCLDFSEEYKKSTTGIVSERTKYLM 184

Query: 163 VVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLAN 222
           VVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFK+VLA+
Sbjct: 185 VVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKNVLAD 244

Query: 223 DVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLP 282
           DV IVSSLPST               +   +I    + +L REGVLLLRGLDSRLSKDLP
Sbjct: 245 DVHIVSSLPST---------------IYYSYIYGLSI-KLRREGVLLLRGLDSRLSKDLP 288

Query: 283 SDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPG-- 340
           SDLQKLRCKVAFHALRFAPPI++LGNK  ERMRSKGPYL+LHLRMEKDVWVRTGCLPG  
Sbjct: 289 SDLQKLRCKVAFHALRFAPPIVELGNKFTERMRSKGPYLALHLRMEKDVWVRTGCLPGLS 348

Query: 341 PEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWA 400
           PEYDEMI+NER +RPELLTARSNM+YH+RKLAGLCPLNA EV RLLKALGAP+  RIYWA
Sbjct: 349 PEYDEMINNERIRRPELLTARSNMSYHDRKLAGLCPLNAYEVMRLLKALGAPRDTRIYWA 408

Query: 401 GGEPLGGKEALLPLITEFPHLYNKEDLALP 430
           GG+PLGGKEAL PL  EFP+ YNKEDLALP
Sbjct: 409 GGQPLGGKEALQPLTGEFPNFYNKEDLALP 438

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357457469|ref|XP_003599015.1| Growth regulator like protein [Medicago truncatula] gi|355488063|gb|AES69266.1| Growth regulator like protein [Medicago truncatula]

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 322/485 (66%), Positives = 363/485 (74%), Gaps = 69/485 (14%)

Query: 6   KQLSYISVPSQIINSLSSSSLQSLLVSPKKPSKSS-FSRNSYKNPRFWFLTLFLVGLFGM 64
           K+LSYISVPSQIINS+SSSSLQSL+ SPKK SK++ F+R S      WFL LFLVG FGM
Sbjct: 9   KKLSYISVPSQIINSISSSSLQSLIDSPKKSSKTTIFTRKST----LWFLALFLVGFFGM 64

Query: 65  LKLGFNLDPPIPFSPYPCFTTSPRDSFASNEQ-------------------QNGQKDEIL 105
            K GFN  P  PF   PC TT  + S +++                     +N   DE L
Sbjct: 65  FKFGFN--PDTPFPQKPCSTTLQKFSISNHHSFSKLGFGSVLLQKERKTSLKNDHNDEFL 122

Query: 106 KGFNESQALVSK-GFEDSEESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVV 164
           +  + S+ LVS    +    SEFWK+P+G+GY+PCL FS +YR+ S  ++KDRRKYL+VV
Sbjct: 123 Q--HGSEFLVSHVQLQAKGSSEFWKKPNGLGYKPCLSFSNDYRRQSERVLKDRRKYLMVV 180

Query: 165 VSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDV 224
           VSGGMNQQRNQIVDAVVIARILGAALVVP+LQVNVIWGDESEF DIFDLEHFK VLANDV
Sbjct: 181 VSGGMNQQRNQIVDAVVIARILGAALVVPVLQVNVIWGDESEFGDIFDLEHFKRVLANDV 240

Query: 225 RIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSD 284
           R+VS+LPSTHIMTRPV E R PLH +P WIRARYLRRLNREGVLLLRGLDSRLSKDLPSD
Sbjct: 241 RVVSALPSTHIMTRPV-EGRPPLHATPSWIRARYLRRLNREGVLLLRGLDSRLSKDLPSD 299

Query: 285 LQKLRCK-------------------------------------VAFHALRFAPPILQLG 307
           LQKLRCK                                     VAF+ALRFA PI +LG
Sbjct: 300 LQKLRCKVNKHYREEKPRKYLKRLRSLFIRQVIADCERCHLNFQVAFNALRFAEPIEELG 359

Query: 308 NKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPG--PEYDEMISNERKQRPELLTARSNMT 365
           NK+A+RM+SKGPYL+LHLRMEKDVWVRTGCLPG  PEYDE+I+NER QRPELLTARSNMT
Sbjct: 360 NKIADRMKSKGPYLALHLRMEKDVWVRTGCLPGLTPEYDEVINNERIQRPELLTARSNMT 419

Query: 366 YHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEFPHLYNKE 425
           YH+RK+AGLCPLN +EV RLLKALGAPK ARIYWAGG+PLGGKEALLPLI EFP+ YNKE
Sbjct: 420 YHQRKMAGLCPLNVMEVMRLLKALGAPKDARIYWAGGKPLGGKEALLPLIQEFPNFYNKE 479

Query: 426 DLALP 430
           DLALP
Sbjct: 480 DLALP 484

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532281|ref|XP_003534702.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max]

 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 306/432 (70%), Positives = 350/432 (81%), Gaps = 15/432 (3%)

Query: 6   KQLSYISVPSQIINSLSSSSLQSLLVSPKKPSKSS--FSRNSYKNPRFWFLTLFLVGLFG 63
           K+LSYISVPSQIINS+SSSSLQSLL SPKK ++ S  F+      PR +  TLF +  F 
Sbjct: 9   KKLSYISVPSQIINSISSSSLQSLLESPKKCARHSKFFTFVKCIRPRLFLFTLFFLAFFA 68

Query: 64  MLKLGFNLDPPIPFSPYPCFTTSPRDSFASNEQQNGQKDEILKGFNESQAL----VSKGF 119
           MLK G NL  P P  P+PC T+   D   SN  Q G    + +    S  L    V  G 
Sbjct: 69  MLKFGLNLYTPFP--PFPCATSV--DPSKSNLGQQGGDVGVSEALISSVQLHGTEVPSGV 124

Query: 120 EDSEESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQQRNQIVDA 179
              E+SEFW+QPDG GY+PCL+FS+EYR+ S  +VK+RR+YL+VVVSGGMNQQRNQIVDA
Sbjct: 125 --GEKSEFWEQPDGSGYKPCLNFSKEYRRESEGVVKNRRRYLMVVVSGGMNQQRNQIVDA 182

Query: 180 VVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHIMTRP 239
           VVIARILGA+LVVPILQVNVIWGDESEF+DIFDLEHFKSVLA+DVR+VS+LPSTH+MTRP
Sbjct: 183 VVIARILGASLVVPILQVNVIWGDESEFADIFDLEHFKSVLADDVRVVSALPSTHLMTRP 242

Query: 240 VEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFHALRF 299
           VE    P H +P WIR+ YLRR NREGVLLLRGLDSRL+KDLP DLQKLRCKVAF ALRF
Sbjct: 243 VEGSPIP-HATPSWIRSHYLRRFNREGVLLLRGLDSRLTKDLPPDLQKLRCKVAFQALRF 301

Query: 300 APPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPG--PEYDEMISNERKQRPEL 357
           A P+ +LGN +AERM+SKGPYL+LHLRMEKDVWVRTGCLPG  PEYDE+++NER +RPEL
Sbjct: 302 AKPVQELGNNIAERMKSKGPYLALHLRMEKDVWVRTGCLPGLSPEYDEIVNNERTKRPEL 361

Query: 358 LTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITE 417
           LTA+SNMTYHERKLAGLCPLN++EVTRLLK LGAPK ARIYWAGG+PLGGKE L PLI E
Sbjct: 362 LTAKSNMTYHERKLAGLCPLNSIEVTRLLKGLGAPKNARIYWAGGQPLGGKEVLQPLINE 421

Query: 418 FPHLYNKEDLAL 429
           FPHLY+KEDLAL
Sbjct: 422 FPHLYSKEDLAL 433

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	455
TAIR|locus:2050564	573	AT2G44500 [Arabidopsis thalian	0.846	0.671	0.738	2.2e-153
TAIR|locus:2077482	579	AT3G07900 [Arabidopsis thalian	0.727	0.571	0.710	2e-130
TAIR|locus:2167311	559	AT5G63390 [Arabidopsis thalian	0.826	0.672	0.570	5.5e-109
TAIR|locus:2014619	572	AT1G76270 [Arabidopsis thalian	0.690	0.548	0.381	1.1e-48
TAIR|locus:2130938	549	AT4G16650 [Arabidopsis thalian	0.685	0.568	0.395	4.8e-46
TAIR|locus:2157096	652	AT5G35570 [Arabidopsis thalian	0.652	0.455	0.385	1e-45
TAIR|locus:2174754	522	AT5G64600 [Arabidopsis thalian	0.639	0.557	0.373	1.6e-45
TAIR|locus:2010657	519	AT1G04910 [Arabidopsis thalian	0.637	0.558	0.357	1.2e-44
TAIR|locus:2121909	519	AT4G24530 [Arabidopsis thalian	0.439	0.385	0.381	3.9e-44
TAIR|locus:2168297	504	AT5G65470 [Arabidopsis thalian	0.485	0.438	0.357	7.6e-44

TAIR|locus:2050564 AT2G44500 [Arabidopsis thaliana (taxid:3702)]

 Score = 1496 (531.7 bits), Expect = 2.2e-153, P = 2.2e-153
 Identities = 293/397 (73%), Positives = 330/397 (83%)

Query:    46 YKNPRFWFLTLFLVGLFGMLKLGFNLDP-PIPFSPYPCFTTSPRDSFASNEQQNGQ---- 100
             Y+NPR WF TLFLV LFGMLKLGFN+DP  +PFS YPC TT    SF   +         
Sbjct:    56 YRNPRIWFFTLFLVSLFGMLKLGFNVDPISLPFSRYPCSTTQQPLSFDGEQNAASHLGLA 115

Query:   101 KDEILK-GFNESQALVSKGFEDSE----ESEFWKQPDGMGYRPCLHFSREYRKYSNAIVK 155
             ++ IL  G + S A++      +E    E +FWKQPDG+G++PCL F+ +YRK SN+I+K
Sbjct:   116 QEPILSTGSSNSNAIIQLNGGKNETLLTEGDFWKQPDGLGFKPCLGFTSQYRKDSNSILK 175

Query:   156 DRRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEH 215
             +R KYLLVVVSGGMNQQRNQIVDAVVIARILGA+LVVP+LQVNVIWGDESEF+DIFDLEH
Sbjct:   176 NRWKYLLVVVSGGMNQQRNQIVDAVVIARILGASLVVPVLQVNVIWGDESEFADIFDLEH 235

Query:   216 FKSVLANDVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDS 275
             FK VLA+DV IVSSLPSTH+MTRPVEEKRTPLH SPQWIRA YL+R+NRE VLLLRGLDS
Sbjct:   236 FKDVLADDVHIVSSLPSTHVMTRPVEEKRTPLHASPQWIRAHYLKRINRERVLLLRGLDS 295

Query:   276 RLSKDLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRT 335
             RLSKDLPSDLQKLRCKVAF ALRF+P IL+LGNKLA RMR++G YLSLHLRMEKDVWVRT
Sbjct:   296 RLSKDLPSDLQKLRCKVAFQALRFSPRILELGNKLASRMRNQGQYLSLHLRMEKDVWVRT 355

Query:   336 GCLPG--PEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPK 393
             GCLPG  PEYDE++++ER++ PELLT RSNMTYHERKLAGLCPL A+EVTRLLKAL APK
Sbjct:   356 GCLPGLTPEYDEIVNSERERHPELLTGRSNMTYHERKLAGLCPLTALEVTRLLKALEAPK 415

Query:   394 IARIYWAGGEPLGGKEALLPLITEFPHLYNKEDLALP 430
              ARIYWAGGEPLGGKE L PL  EFP  YNK DLALP
Sbjct:   416 DARIYWAGGEPLGGKEVLEPLTKEFPQFYNKHDLALP 452

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2077482 AT3G07900 [Arabidopsis thaliana (taxid:3702)]

 Score = 1241 (441.9 bits), Expect = 2.0e-130, Sum P(2) = 2.0e-130
 Identities = 238/335 (71%), Positives = 285/335 (85%)

Query:   100 QKDEILKGFNESQALVSKGF-EDSEESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRR 158
             +K+E   G ++S  ++  G   D +  +FWKQPDG+GY+PCL FS EYR+ S  I+ +RR
Sbjct:   131 EKNETFGG-HQSHLIIPNGNGHDDKNYDFWKQPDGLGYKPCLDFSIEYRRESKKILVERR 189

Query:   159 KYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKS 218
             KYL+VVVSGG+NQQ+ QIVDAVVIARILGA LVVPILQ+N+IWGDESEFSDIFDLE FKS
Sbjct:   190 KYLMVVVSGGLNQQKIQIVDAVVIARILGAVLVVPILQINLIWGDESEFSDIFDLEQFKS 249

Query:   219 VLANDVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLS 278
             VLANDV+IVS LP++ +MTRP E+   P + SPQWIR+ Y +R NREGVLLLR LDSRLS
Sbjct:   250 VLANDVKIVSLLPASKVMTRPSEDGSMPFNASPQWIRSHYPKRFNREGVLLLRRLDSRLS 309

Query:   279 KDLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCL 338
             KDLPSDLQKLRCKVAF AL+F+P ++++G KLAERMRSKGPY++LHLRMEKDVWVRTGCL
Sbjct:   310 KDLPSDLQKLRCKVAFEALKFSPRVMEMGTKLAERMRSKGPYIALHLRMEKDVWVRTGCL 369

Query:   339 PG--PEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIAR 396
              G   +YDE+++ ER +RPELLTA+S+MT +ERKLAGLCPLNA EVTRLL+ALGAP+ AR
Sbjct:   370 SGLSSKYDEIVNIERIKRPELLTAKSSMTSNERKLAGLCPLNAKEVTRLLRALGAPRDAR 429

Query:   397 IYWAGGEPLGGKEALLPLITEFPHLYNKEDLALPV 431
             IYWAGGEPLGGKEAL PL +EFPHLYNK D+ALP+
Sbjct:   430 IYWAGGEPLGGKEALKPLTSEFPHLYNKYDIALPL 464

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2167311 AT5G63390 [Arabidopsis thaliana (taxid:3702)]

 Score = 1077 (384.2 bits), Expect = 5.5e-109, P = 5.5e-109
 Identities = 223/391 (57%), Positives = 278/391 (71%)

Query:    49 PRFWFLTLFLVGLF-GMLKLGFNLDPPIPFSPYPCFTTSPRDS--FASNEQQNGQ--KDE 103
             P+F+ L + L  +F G+  L F+LD         C +TS   S  F  ++  + Q     
Sbjct:    51 PQFFLLLISLSLVFSGISFLTFSLDT----GSSTCVSTSSASSLKFFISDVDHRQILTSL 106

Query:   104 ILKGFNESQALVSKGFEDS----EESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRK 159
              + G +    L ++G        EE EFWKQP+G GY+PCL FS EY+K S ++ K++++
Sbjct:   107 AVSGASTLFPLPARGGHSGNMTEEEKEFWKQPNGEGYKPCLDFSLEYKKKSASVSKEKKR 166

Query:   160 YLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSV 219
             +L+VVVSGG+NQQRNQIVDAVVIA IL AALVVP+LQVN +WGDESEFSD+FD+EHFK  
Sbjct:   167 FLVVVVSGGLNQQRNQIVDAVVIAMILEAALVVPVLQVNRVWGDESEFSDLFDVEHFKKT 226

Query:   220 LANDVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSK 279
             L +DVRIVSSLPSTH+M+R   E + P  VSP WIRA+Y ++LN EG+L+L+GLDS+L+K
Sbjct:   227 LRSDVRIVSSLPSTHLMSRQTIENQIPWDVSPVWIRAKYFKQLNEEGLLVLKGLDSKLAK 286

Query:   280 DLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLP 339
             +LP DLQKLRCKVAFHALRFA PI  LGNKL  RM  +GPY++LHLR+EKDVWVRTGCL 
Sbjct:   287 NLPPDLQKLRCKVAFHALRFAAPIENLGNKLTRRMWIEGPYIALHLRLEKDVWVRTGCLT 346

Query:   340 G--PEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARI 397
             G   E+D +I+  R  +P  LT R N+TY ER+LAG CPLN  E+ RLLKALGAP  A I
Sbjct:   347 GLGSEFDRIIAETRTSQPRYLTGRLNLTYTERRLAGFCPLNVYEIARLLKALGAPSNASI 406

Query:   398 YWAGGEPLGGKEALLPLITEFPHLYNKEDLA 428
             Y AGGEP GG  AL PL  EF +L  KE LA
Sbjct:   407 YIAGGEPFGGSRALEPLAKEFSNLVTKETLA 437

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2014619 AT1G76270 [Arabidopsis thaliana (taxid:3702)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 126/330 (38%), Positives = 178/330 (53%)

Query:   108 FNESQALVSKGFE-----DSEESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLL 162
             ++ + A+ + GF         + + W+  +   +  C + S ++   S A+ ++ R YL+
Sbjct:    54 YSSNDAIKATGFHIPRAGGRSDRDIWRSRNAEFFFGCSNASSKFAN-SKAVTRNDR-YLV 111

Query:   163 VVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLAN 222
             +  SGG+NQQR  IVDAVV ARIL A LVVP L     W D S+FS IFD++ F S L+ 
Sbjct:   112 IATSGGLNQQRTGIVDAVVAARILNATLVVPKLDQKSYWKDASDFSHIFDVDWFISFLSG 171

Query:   223 DVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLP 282
             DVRI+  LP     T      R P   + +    R L  L +   + L   D RLS  L 
Sbjct:   172 DVRIIKQLPLKGGRTWSTSRMRVPRKCNERCYINRVLPVLLKRHAVQLNKFDYRLSNKLS 231

Query:   283 SDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGP-YLSLHLRMEKDVWVRTGCLPG- 340
              DLQKLRC+V +HAL+F  PIL +GN+L  RMR +   +++LHLR E D+   +GC  G 
Sbjct:   232 DDLQKLRCRVNYHALKFTDPILTMGNELVRRMRLRSKHFIALHLRYEPDMLAFSGCYYGG 291

Query:   341 --PEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIY 398
                E  E+ +  R+ +    T   N    +R+  G CPL   EV  +L+ALG      IY
Sbjct:   292 GDKERRELAAIRRRWK----TLHINNPEKQRR-QGRCPLTPEEVGLMLRALGYGSDVHIY 346

Query:   399 WAGGEPLGGKEALLPLITEFPHLYNKEDLA 428
              A GE  GG+E+L PL   FPH Y+K+ +A
Sbjct:   347 VASGEVYGGEESLAPLKALFPHFYSKDTIA 376

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 129/326 (39%), Positives = 170/326 (52%)

Query:   111 SQALVSKGFEDSEESE---FWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRK-YLLVVVS 166
             SQ L  +   D    E    WK      +  C   S   R +  A+ +     YLL+  S
Sbjct:    75 SQQLSKRSLLDMSRREPIDVWKSKYSKFFYGC---SERGRNFLPAVQEQSSNGYLLIAAS 131

Query:   167 GGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRI 226
             GG+NQQR  I DAVV+ARIL A LVVP L  +  W D+S+FSDIFD+  F S LA DV I
Sbjct:   132 GGLNQQRTGITDAVVVARILNATLVVPELDHHSYWKDDSDFSDIFDVNWFISSLAKDVTI 191

Query:   227 VSSLPST--HIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPSD 284
             V  +P      M +P    R P   + ++   + L  L R  VL L   D RL+ DL  D
Sbjct:   192 VKRVPDRVMRAMEKPPYTTRVPRKSTLEYYLDQVLPILTRRHVLQLTKFDYRLANDLDED 251

Query:   285 LQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGP-YLSLHLRMEKDVWVRTGC-LPGPE 342
             +QKLRC+V +HALRF   I  +G K+ +RMR     ++++HLR E D+   +GC   G E
Sbjct:   252 MQKLRCRVNYHALRFTKRIQSVGMKVVKRMRKMAKRFIAVHLRFEPDMLAFSGCDFGGGE 311

Query:   343 YDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGG 402
              +     E ++R + L     +   ERK  G CPL   EV  +L+ALG      IY A G
Sbjct:   312 KERAELAEIRKRWDTLPDLDPL--EERK-RGKCPLTPHEVGLMLRALGFTNDTYIYVASG 368

Query:   403 EPLGGKEALLPLITEFPHLYNKEDLA 428
             E  GG++ L PL   FP+ Y KE LA
Sbjct:   369 EIYGGEKTLKPLRELFPNFYTKEMLA 394

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2157096 AT5G35570 [Arabidopsis thaliana (taxid:3702)]

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 120/311 (38%), Positives = 169/311 (54%)

Query:   123 EESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVI 182
             E S  W +P+   +  C+  SR  +K       +   YLL+  +GG+NQ R  I D V +
Sbjct:   221 EFSGVWAKPESGNFSRCIDSSRSRKKLG----ANTNGYLLINANGGLNQMRFGICDMVAV 276

Query:   183 ARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHIMTRPVEE 242
             A+I+ A LV+P L  +  W D+S F D+FD +HF   L +D+ IV  LPS      P   
Sbjct:   277 AKIMKATLVLPSLDHSSYWADDSGFKDLFDWQHFIEELKDDIHIVEMLPSELAGIEPFV- 335

Query:   243 KRTPLHVSPQ-WIRARYLRRLNREGVLLLRGLDSRLSK-DLPSDLQKLRCKVAFHALRFA 300
              +TP+  S   + +   L  L +  V+ L   DSRL+  DLP  +QKLRC+V + AL+++
Sbjct:   336 -KTPISWSKVGYYKKEVLPLLKQHIVMYLTHTDSRLANNDLPDSVQKLRCRVNYRALKYS 394

Query:   301 PPILQLGNKLAERMRS-KGPYLSLHLRMEKDVWVRTGCLPG--PEYDEMISNERKQRPEL 357
              PI +LGN L  RMR  +GPYL+LHLR EKD+   TGC      E DE +   R +    
Sbjct:   395 APIEELGNVLVSRMRQDRGPYLALHLRYEKDMLAFTGCSHSLTAEEDEELRQMRYEVSHW 454

Query:   358 LTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITE 417
                  N T  ER+L G CPL   E + LL+AL  P  +RIY   GE  G   ++ PL T+
Sbjct:   455 KEKEINGT--ERRLQGGCPLTPRETSLLLRALEFPSSSRIYLVAGEAYGNG-SMDPLNTD 511

Query:   418 FPHLYNKEDLA 428
             FP++++   LA
Sbjct:   512 FPNIFSHSILA 522

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2174754 AT5G64600 [Arabidopsis thaliana (taxid:3702)]

 Score = 454 (164.9 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
 Identities = 118/316 (37%), Positives = 167/316 (52%)

Query:   123 EESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVI 182
             E ++ W  P   G  PC+  + +Y+++S +   D   Y+ V  +GG+NQ R  I D V +
Sbjct:    88 ENTQLWTPPFSFGLHPCVKPTPKYKEFSES---DH--YITVKSNGGLNQMRTGIADIVAV 142

Query:   183 ARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHIMTRPVEE 242
             A I+ A LV+P L     W D S FSDIFD E F   L  DV+++  LP   + + P   
Sbjct:   143 AHIMNATLVIPELDKRSFWQDSSVFSDIFDEEQFIKSLRRDVKVIKKLPK-EVESLPRAR 201

Query:   243 KRTPLHVSPQWIRARYLRRLN---RE-GVLLLRGLDSRLSK-DLPSDLQKLRCKVAFHAL 297
             K    H +  W    Y   +    +E  V+ +   DSRL+  DLP D+Q+LRC+V +  L
Sbjct:   202 K----HFT-SWSSVGYYEEMTHLWKEYKVIHVAKSDSRLANNDLPIDVQRLRCRVLYRGL 256

Query:   298 RFAPPILQLGNKLAERMRSK-GPYLSLHLRMEKDVWVRTGCLPG---PEYDEM-ISNERK 352
              F+P I  LG KL ER++S+ G Y++LHLR EKD+   TGC  G    E +E+ +  E  
Sbjct:   257 CFSPAIESLGQKLVERLKSRAGRYIALHLRYEKDMLAFTGCTYGLTDAESEELRVMREST 316

Query:   353 QRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALL 412
                ++ +  S     E++  GLCPL   EV   LK LG  +   IY A GE  GG + L 
Sbjct:   317 SHWKIKSINST----EQREEGLCPLTPKEVGIFLKGLGYSQSTVIYIAAGEIYGGDDRLS 372

Query:   413 PLITEFPHLYNKEDLA 428
              L + FP+L  KE LA
Sbjct:   373 ELKSRFPNLVFKETLA 388

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2010657 AT1G04910 [Arabidopsis thaliana (taxid:3702)]

 Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
 Identities = 109/305 (35%), Positives = 164/305 (53%)

Query:   126 EFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVIARI 185
             E W+     G+RP    S   R       K+   YL V  +GG+NQQR+ I +AV+ ARI
Sbjct:    61 ELWESAKSGGWRP----SSAPRSDWPPPTKETNGYLRVRCNGGLNQQRSAICNAVLAARI 116

Query:   186 LGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLPSTHI--MTRPVE-- 241
             + A LV+P L  N  W D+S F  I+D+EHF   L  DV+IV  +P  H    T+ ++  
Sbjct:   117 MNATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPDVHKNGKTKKIKAF 176

Query:   242 EKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKDLPS-DLQKLRCKVAFHALRFA 300
             + R P     +W     L+ +     + L     RL++++ + + Q+LRC+V +HALRF 
Sbjct:   177 QIRPPRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFK 236

Query:   301 PPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLP--GPEYDEMISNERKQRPELL 358
             P I++L   + +++RS+G ++S+HLR E D+    GC     PE  +++   RK R E  
Sbjct:   237 PHIMKLSESIVDKLRSQGHFMSIHLRFEMDMLAFAGCFDIFNPEEQKIL---RKYRKENF 293

Query:   359 TARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEF 418
              A   + Y+ER+  G CPL   EV  +L+A+      RIY A GE  GG++ + P  T F
Sbjct:   294 -ADKRLIYNERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLF 352

Query:   419 PHLYN 423
             P L N
Sbjct:   353 PRLDN 357

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2121909 AT4G24530 [Arabidopsis thaliana (taxid:3702)]

 Score = 350 (128.3 bits), Expect = 3.9e-44, Sum P(2) = 3.9e-44
 Identities = 82/215 (38%), Positives = 117/215 (54%)

Query:   112 QALVSKGFEDSEESEFWKQPDGMGYRPCLHFSREYRKYSNAIVKDRRKYLLVVVSGGMNQ 171
             Q  + +     ++ E W      G++PC   +  YR  S  + +    +L V + GG+NQ
Sbjct:    61 QGALDRQISIRQQVELWSPLADQGWKPC---TESYRGAS--LPEKSEGFLQVFLDGGLNQ 115

Query:   172 QRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRIVSSLP 231
             QR  I DAV +A+I+   LV+P L+VN +W D S F+DIFDL+HF SVL ++VRIV  LP
Sbjct:   116 QRMGICDAVAVAKIMNVTLVIPRLEVNTVWQDSSSFTDIFDLDHFISVLKDEVRIVRELP 175

Query:   232 -----ST--HIMT--RPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLSKD-L 281
                  ST  +  T  R    K  P+H S +W     L  +   G+  +     RL+ D L
Sbjct:   176 IQYAWSTRDYYATGIRATRIKTAPVHASAEWYLENVLPIIQSYGIAAVAPFSHRLAFDNL 235

Query:   282 PSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRS 316
             P  +Q+LRCKV F AL F P I +LG+ L  R+R+
Sbjct:   236 PESIQRLRCKVNFEALNFVPHIRELGDALVHRLRN 270

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2168297 AT5G65470 [Arabidopsis thaliana (taxid:3702)]

 Score = 355 (130.0 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
 Identities = 85/238 (35%), Positives = 123/238 (51%)

Query:    91 FASNEQQNGQKDEILKGFNESQALVSKGFEDS--EESEFWKQPDGMGYRPCLHFSREYRK 148
             F +N   +    E++       +L+    + S  E+S+ W+     G+ PC+        
Sbjct:    22 FCNNVSTSSSSSEVITIKPRHLSLLKSALQRSSGEQSDLWRPLTDQGWSPCIDLGN---- 77

Query:   149 YSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFS 208
              S ++      Y+ V + GG+NQQR  I DAV +A+IL A LV+P L+VN +W D S F 
Sbjct:    78 -SPSLPDKTAGYVQVFLDGGLNQQRMGICDAVAVAKILNATLVIPYLEVNPVWQDSSSFV 136

Query:   209 DIFDLEHFKSVLANDVRIVSSLPSTHIM-TRP-----VEEKRT---PLHVSPQWIRARYL 259
             DIFD++HF   L +D+R+V  LP  +   TR      V E R    P+H S  W      
Sbjct:   137 DIFDVDHFIDSLKDDIRVVRELPDEYSWSTREYYGTAVRETRVKTAPVHASANWYIENVS 196

Query:   260 RRLNREGVLLLRGLDSRLSKD-LPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRS 316
               L   G+  +     RLS D LP+++Q+LRCKV F ALRF P I  LG+ L  R+R+
Sbjct:   197 PVLQSYGIAAISPFSHRLSFDHLPAEIQRLRCKVNFQALRFVPHITSLGDALVSRLRN 254

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00008872001 SubName- Full=Chromosome chr13 scaffold_210, whole genome shotgun sequence; (536 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	455
cd11299	290	cd11299, O-FucT_plant, GDP-fucose protein O-fucosy	1e-104
pfam10250	315	pfam10250, O-FucT, GDP-fucose protein O-fucosyltra	3e-72
cd11296	206	cd11296, O-FucT_like, GDP-fucose protein O-fucosyl	0.001
cd11296	206	cd11296, O-FucT_like, GDP-fucose protein O-fucosyl	0.002

>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily

 Score =  310 bits (796), Expect = e-104
 Identities = 121/272 (44%), Positives = 157/272 (57%), Gaps = 38/272 (13%)

Query: 160 YLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSV 219
           YLLV  +GG+NQQR+QI DAV +AR+L A LV+P L  N +WGD S+F DI+D++HF   
Sbjct: 1   YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60

Query: 220 LANDVRIVSSLPSTHIMTRP-VEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRLS 278
           L +DVR+V  LP      +P +  KR P   SP +     L  L + GV+ L   DSRL+
Sbjct: 61  LKDDVRVVKKLPEELASKKPEITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLA 120

Query: 279 KD-LPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSK-GPYLSLHLRMEKDVWVRTG 336
            D LP ++Q+LRC+V FHALRF P I +LG+KL +R+R   GP+L+LHLR EKD+   +G
Sbjct: 121 NDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLREAGGPFLALHLRFEKDMLAFSG 180

Query: 337 CLPGPEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIAR 396
           C                                   G CPL   EV  LL+ALG P+  R
Sbjct: 181 C-----------------------------------GKCPLTPEEVGLLLRALGFPRSTR 205

Query: 397 IYWAGGEPLGGKEALLPLITEFPHLYNKEDLA 428
           IY A GE  GG+  L PL + FP+LY KE LA
Sbjct: 206 IYLAAGEIYGGERRLDPLRSIFPNLYTKETLA 237

Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase

 Score =  230 bits (588), Expect = 3e-72
 Identities = 107/275 (38%), Positives = 140/275 (50%), Gaps = 26/275 (9%)

Query: 164 VVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFSDIFDLEHFKSVLAND 223
              GG NQQR+ I DAV +AR+L A LV+P       W D S+FSD FD+EHF S L+  
Sbjct: 5   PCMGGFNQQRDVICDAVAVARLLNATLVLPPWDELYHWKDPSKFSDFFDVEHFISYLSRV 64

Query: 224 VRIVSSLPSTH------IMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLDSRL 277
           V IV  LP                + R  +  SP +     L  L +  V+ L G  +RL
Sbjct: 65  VEIVKFLPKELPSAKRLQYDTFKVDFRVCVQSSPSYYLESVLPLLKKHKVIALTGAPARL 124

Query: 278 SKD-LPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSK-GPYLSLHLRMEKDVWVRT 335
           + + LP DLQ+L      HALRF+P I +LGNKL  R+ +K GP+L++HLR E D     
Sbjct: 125 ANNYLPPDLQRL------HALRFSPEIEELGNKLVSRLLAKGGPFLAVHLRREID-MFS- 176

Query: 336 GC--LPGPEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVTRLLKALGAPK 393
           GC    G +  E++++ R            +   E +  G CPL   EV  LL+ALG PK
Sbjct: 177 GCEHGGGDKESELLASPRCV------GYKRIDSEELRREGCCPLTPEEVGLLLRALGFPK 230

Query: 394 IARIYWAGGEPLGGKEALLPLITEFPHLYNKEDLA 428
              +Y A  E  G    L PL  EFP+L  KE LA
Sbjct: 231 DTSVYIATDEIYG--RELEPLKAEFPNLVTKESLA 263

This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats. Six highly conserved cysteines are present in O-FucT-1 as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and C. elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese. Length = 315

>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 294 FHALRFAPPILQLGNKLAERMRSK--GPYLSLHLRMEKDVWVR 334
              LRF+P I +L ++   ++     GPYL++HLR        
Sbjct: 46  GKHLRFSPEIRKLADRFVRKLLGLPGGPYLAVHLRRGDFEVEC 88

O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 206

>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 160 YLL-VVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIW 201
           YLL +   GG N QRN+ ++A+++A +LG  LV+P+     I 
Sbjct: 1   YLLPIPDGGGFNNQRNEFLNALLLAILLGRTLVLPLCLACPIR 43

O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 206

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	455
PF10250	351	O-FucT: GDP-fucose protein O-fucosyltransferase; I	100.0
KOG3849	386	consensus GDP-fucose protein O-fucosyltransferase	96.16
PF05830	321	NodZ: Nodulation protein Z (NodZ); InterPro: IPR00	93.65

>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats

Probab=100.00  E-value=4e-47  Score=372.06  Aligned_cols=257  Identities=31%  Similarity=0.485  Sum_probs=171.2

Q ss_pred             EcCCchhhHHHHHHHHHHHHHhCCeEeecccccccccCCCCC-----CCCCCChHHHHHhccCCeEEeccCcccccccCC
Q 012839          165 VSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESE-----FSDIFDLEHFKSVLANDVRIVSSLPSTHIMTRP  239 (455)
Q Consensus       165 ~nGGLNQqR~~IcDAVaVARiLNATLViP~Ld~~s~W~D~S~-----F~DIFDvdhFI~sL~~DVrIVk~LP~~~~~~~~  239 (455)
                      +.||+|+||.++++||++|++||+|||||.+.....|+|.++     |+|+||++||+++++++|.+.+.+|........
T Consensus         6 ~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~   85 (351)
T PF10250_consen    6 CMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFR   85 (351)
T ss_dssp             -SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccc
Confidence            889999999999999999999999999999999999999998     999999999999999999999999865432111


Q ss_pred             c------------------------------ccccCC-CCCChhhHHhHhhHhhhcc------ceEEEeccccccCCC-C
Q 012839          240 V------------------------------EEKRTP-LHVSPQWIRARYLRRLNRE------GVLLLRGLDSRLSKD-L  281 (455)
Q Consensus       240 ~------------------------------~~~~vp-~~~spswy~~~vlP~L~k~------~VI~l~~~d~RLa~~-l  281 (455)
                      .                              ...... .+..+.||.++++|.+.++      +|+.|.++..++.++ .
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  165 (351)
T PF10250_consen   86 LQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYL  165 (351)
T ss_dssp             EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GG
T ss_pred             hhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhccc
Confidence            0                              011122 2567778877788988886      999999999999965 8


Q ss_pred             chhhhhhhhhhcccceeechhHHHHHHHHHHHHH-cCCCeeeeeccccchhhhhcccCCCchhhHHHHHHHhhhhhhhhc
Q 012839          282 PSDLQKLRCKVAFHALRFAPPILQLGNKLAERMR-SKGPYLSLHLRMEKDVWVRTGCLPGPEYDEMISNERKQRPELLTA  360 (455)
Q Consensus       282 P~eiQrLRCrvnf~ALrF~p~I~~Lg~~LV~Rmr-~~GpyIALHLRfEkDMlAfSgC~~g~e~~El~~~~R~~~~~~~~~  360 (455)
                      +.++||        +|+|+++|+++|++++++++ ..++|||+|||+|+||  +++|.++. ..+.++..|..      +
T Consensus       166 ~~~~~r--------~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~--~~~C~~~~-~~~~~~~~~~~------~  228 (351)
T PF10250_consen  166 DRDLQR--------YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDW--FSACEFKG-ERHLLASPRCW------G  228 (351)
T ss_dssp             GGGGGG--------G--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHH--HHHHCT-T-----TTTHHHH-------
T ss_pred             CccceE--------EEecCHHHHHHHHHHHHHhhcccCceEEEeecccCch--HhhcccCC-chHHHHHhHhh------c
Confidence            888987        99999999999999999999 7899999999999999  99999965 55555666654      2


Q ss_pred             ccCCChHhhhcCCCCCCCHHHHHHHHHHhCCCCCceEEEeeCCCCCCccccccHHhhCCCCcccccCCChhhhhhhhH
Q 012839          361 RSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEFPHLYNKEDLALPVTFSCLLM  438 (455)
Q Consensus       361 ~~~i~~~~~R~~G~CPLTPeEVgl~LrALGf~~~T~IYlAsGeiYGg~~~L~pL~~~FPnl~tKetLat~eEL~p~~~  438 (455)
                      ++.......+..|.||++|++++.+++++|+.+.|.||||++++|||.+.|++|+++||++++|+++.+.+|++++.-
T Consensus       229 ~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  306 (351)
T PF10250_consen  229 KKSINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEELEPLND  306 (351)
T ss_dssp             GGGTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--S-----
T ss_pred             cccccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHHhhhccc
Confidence            334555567778999999999999999999999999999999999999999999999999999999999999976543

Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=96.16  E-value=0.054  Score=55.42  Aligned_cols=171  Identities=23%  Similarity=0.328  Sum_probs=97.4

Q ss_pred             CCcceEEEE-EcCCchhhHHHHHHHHHHHHHhCCeEeeccc---ccccccCCCCCCCCCCChH------------HHHHh
Q 012839          156 DRRKYLLVV-VSGGMNQQRNQIVDAVVIARILGAALVVPIL---QVNVIWGDESEFSDIFDLE------------HFKSV  219 (455)
Q Consensus       156 ~snGYL~V~-~nGGLNQqR~~IcDAVaVARiLNATLViP~L---d~~s~W~D~S~F~DIFDvd------------hFI~s  219 (455)
                      ..||||+.- |-|-.-+|-...--..|-|+.||.|||+|-.   ++-.+-+---.|.-.|.++            .|++-
T Consensus        27 DP~GYl~yCPCMGRFGNQaDhFLGsLAFAKaLnRTL~lPpwiEy~~pe~~n~~vpf~~yF~vepl~~YhRVitm~dFm~k  106 (386)
T KOG3849|consen   27 DPAGYLLYCPCMGRFGNQADHFLGSLAFAKALNRTLVLPPWIEYKHPETKNLMVPFEFYFQVEPLAKYHRVITMQDFMKK  106 (386)
T ss_pred             CCCccEEEccccccccchHHHHHHHHHHHHHhcccccCCcchhccCCcccccccchhheeecccHhhhhhheeHHHHHHH
Confidence            479998775 8899999989999999999999999999963   2222222224577777765            34554


Q ss_pred             ccCCeE-------EeccCccccccc---CCcccccCCCCCChhh------------------------HHhHhhHhh--h
Q 012839          220 LANDVR-------IVSSLPSTHIMT---RPVEEKRTPLHVSPQW------------------------IRARYLRRL--N  263 (455)
Q Consensus       220 L~~DVr-------IVk~LP~~~~~~---~~~~~~~vp~~~spsw------------------------y~~~vlP~L--~  263 (455)
                      |..+.=       |--+-   -..+   ++.+..+--+-..|-|                        ..++.+..+  +
T Consensus       107 lapthwp~~~Rva~c~k~---a~qr~pdkp~Ch~KeGNPFGPfWDqfhvsFv~sE~f~~i~Fd~~~~~~~~kW~~kfp~e  183 (386)
T KOG3849|consen  107 LAPTHWPGTPRVAICDKS---AAQRSPDKPGCHSKEGNPFGPFWDQFHVSFVGSEYFGDIGFDLNQMGSRKKWLEKFPSE  183 (386)
T ss_pred             hCcccCCCCcceeeeehh---hhccCCCCCCCcccCCCCCCCchhheEeeeeccccccccccchhhcchHHHHHhhCCcc
Confidence            444321       10000   0000   1111011000001111                        112222222  3


Q ss_pred             ccceEEEeccccccC-CCCchhhhhhhhhhcccceeechhHHHHHHHHHHHHHcCCCeeeeeccccchhhhhcccCCC
Q 012839          264 REGVLLLRGLDSRLS-KDLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLPG  340 (455)
Q Consensus       264 k~~VI~l~~~d~RLa-~~lP~eiQrLRCrvnf~ALrF~p~I~~Lg~~LV~Rmr~~GpyIALHLRfEkDMlAfSgC~~g  340 (455)
                      +|-|+.|++.-.... ..---.+||        -||++.+|.+-|++.+..=-. .||+++|||---|++-  .|.+-
T Consensus       184 eyPVLAf~gAPA~FPv~~e~~~lQk--------Yl~WS~r~~e~~k~fI~a~L~-rpfvgiHLRng~DWvr--aCehi  250 (386)
T KOG3849|consen  184 EYPVLAFSGAPAPFPVKGEVWSLQK--------YLRWSSRITEQAKKFISANLA-RPFVGIHLRNGADWVR--ACEHI  250 (386)
T ss_pred             cCceeeecCCCCCCccccccccHHH--------HHHHHHHHHHHHHHHHHHhcC-cceeEEEeecCchHHH--HHHHh
Confidence            567777764322221 011124665        489999999999887654332 3999999999999986  37653

>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation

Probab=93.65  E-value=0.91  Score=47.07  Aligned_cols=208  Identities=19%  Similarity=0.267  Sum_probs=103.8

Q ss_pred             cceEEEEEcCCchhhHHHHHHHHHHHHHhCCeEeecccccccccCCC----CCCCCCCChHHHHHhcc--CCeEEeccCc
Q 012839          158 RKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDE----SEFSDIFDLEHFKSVLA--NDVRIVSSLP  231 (455)
Q Consensus       158 nGYL~V~~nGGLNQqR~~IcDAVaVARiLNATLViP~Ld~~s~W~D~----S~F~DIFDvdhFI~sL~--~DVrIVk~LP  231 (455)
                      +.|++.+--+|++.-=-+++-|-..|+-.|-||||=       |+++    -.|...|++  |-+-.+  ..|+|+-+=+
T Consensus         2 ~r~~~~r~r~g~gd~l~~la~aw~~a~~~~r~l~id-------w~~s~~~~~~f~n~f~~--ffepv~~i~~~~~~~~d~   72 (321)
T PF05830_consen    2 QRFVVSRRRTGLGDCLWSLAAAWRYAKRTGRTLVID-------WRGSCYLDQPFTNAFPV--FFEPVEDIAGVRVICDDR   72 (321)
T ss_dssp             --EEEEE--S-HHHHHHHHHHHHHHHHHHT-EEEEE--------BT-TT-SSTTSBSHHH--HB---SEETTEEEE-SGG
T ss_pred             CceEEEeccCCchhHHHHHHHHHHHHHHhCCeEEEE-------cCCceecCCcccccCCc--ccchhhhhcCceeEecch
Confidence            578999999999999999999999999999999983       6665    345555543  444433  3445542211


Q ss_pred             ccccccCCcccccCCCCCChhhHH-----------hHh------h-Hhhh------ccceEEEeccccccCCCCchhhhh
Q 012839          232 STHIMTRPVEEKRTPLHVSPQWIR-----------ARY------L-RRLN------REGVLLLRGLDSRLSKDLPSDLQK  287 (455)
Q Consensus       232 ~~~~~~~~~~~~~vp~~~spswy~-----------~~v------l-P~L~------k~~VI~l~~~d~RLa~~lP~eiQr  287 (455)
                              ......|-...|.|.+           +.+      | -++.      ..-||+.+.+.-|=.      -+.
T Consensus        73 --------i~~~~~~g~~fp~~w~~p~~~~~~~pd~qi~re~d~l~~lf~~~~d~~a~~vv~d~c~~~~c~------~~a  138 (321)
T PF05830_consen   73 --------INQFSFPGPFFPAWWNKPSIDCVYRPDEQIFRERDELRQLFQSQEDHEANTVVCDACLMWRCD------EEA  138 (321)
T ss_dssp             --------GGT----SSEESGGGGS-GGGGS---HHHHHHHHHHHHHHHHSSS--S-SEEEE-S--TTSS-------HHH
T ss_pred             --------hhhhcCCCCcChhHHhCCCcceecCChHHHhhhhHHHHHHhhcccccccchhhhHhhcCCcch------hHH
Confidence                    1111122222233322           111      1 1222      345787777654432      223


Q ss_pred             hhhhhcccceeechhHHHHHHHHHHHHHcCCCeeeeecccc--chhhhhcccCCCchhhHHHHHHHhhhhhhhhcccCCC
Q 012839          288 LRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRME--KDVWVRTGCLPGPEYDEMISNERKQRPELLTARSNMT  365 (455)
Q Consensus       288 LRCrvnf~ALrF~p~I~~Lg~~LV~Rmr~~GpyIALHLRfE--kDMlAfSgC~~g~e~~El~~~~R~~~~~~~~~~~~i~  365 (455)
                      .|  .-|..|+-+++|++..+.+-++-=.+..=|.+|.|.=  +|...+ +|++-+++.-                    
T Consensus       139 eR--~if~slkpR~eIqarID~iy~ehf~g~~~IGVHVRhGngeD~~~h-~~~~~D~e~~--------------------  195 (321)
T PF05830_consen  139 ER--EIFSSLKPRPEIQARIDAIYREHFAGYSVIGVHVRHGNGEDIMDH-APYWADEERA--------------------  195 (321)
T ss_dssp             HH--HHHHHS-B-HHHHHHHHHHHHHHTTTSEEEEEEE----------------HHHHHH--------------------
T ss_pred             HH--HHHHhCCCCHHHHHHHHHHHHHHcCCCceEEEEEeccCCcchhcc-CccccCchHH--------------------
Confidence            33  3588999999999998888777655556899999932  122222 1221110000                    


Q ss_pred             hHhhhcCCCCCCCH-HHHHHHHHHhCCCCCceEEEeeCCCCCCccccccHHhhCCCCccccc
Q 012839          366 YHERKLAGLCPLNA-VEVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEFPHLYNKED  426 (455)
Q Consensus       366 ~~~~R~~G~CPLTP-eEVgl~LrALGf~~~T~IYlAsGeiYGg~~~L~pL~~~FPnl~tKet  426 (455)
                                 |.. ......++++=.+.++.|+||+-.    .+-++-+++.||.+++.+.
T Consensus       196 -----------L~~V~~ai~~ak~~~~~k~~~IFLATDS----aeVid~fr~~FPdiiti~k  242 (321)
T PF05830_consen  196 -----------LRQVCTAIDKAKALAPPKPVRIFLATDS----AEVIDQFRKKFPDIITIPK  242 (321)
T ss_dssp             -----------HHHHHHHHHHHHTS--SS-EEEEEEES-----HHHHHHHHHHSTTEE----
T ss_pred             -----------HHHHHHHHHHHHhccCCCCeeEEEecCc----HHHHHHHHHHCCCeEEccc
Confidence                       000 112233455666778999999995    5678999999999887643

NodZ is required for the addition of a 2-O-methylfucose residue to the terminal reducing N-acetylglucosamine of the nodulation signal. This substitution is essential for the biological activity of this molecule. Mutations in nodZ result in defective nodulation. nodZ represents a unique nodulation gene that is not under the control of NodD and yet is essential for the synthesis of an active nodulation signal [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3SIX_A 2HLH_A 2HHC_A 3SIW_A 2OCX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	455
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.0 bits (121), Expect = 6e-07
 Identities = 63/357 (17%), Positives = 115/357 (32%), Gaps = 111/357 (31%)

Query: 91  FASNEQQNGQKDEILKGFNESQALVSKGFE--DSEESEFWKQPDGMGYRPCLHFSREYRK 148
           F + E Q   KD IL  F ++       F+  D ++            +  L    E   
Sbjct: 9   FETGEHQYQYKD-ILSVFEDA---FVDNFDCKDVQDMP----------KSILS-KEEIDH 53

Query: 149 YSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFS 208
              +         L      +  ++ ++V             V  +L++N  +       
Sbjct: 54  IIMSKDAVSGTLRLFWT---LLSKQEEMVQK----------FVEEVLRINYKF------- 93

Query: 209 DIFDLEHFKSVLANDVRIVSSLPSTHIMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVL 268
                      L + ++     PS  +MTR   E+R  L+   Q      + RL  +  L
Sbjct: 94  -----------LMSPIKTEQRQPS--MMTRMYIEQRDRLYNDNQVFAKYNVSRL--QPYL 138

Query: 269 LLRGLDSRLSKDLPSDLQKLR--CKVAFHALRFAPPILQLGN-K--LA-ERMRSKGPYLS 322
            LR             L +LR    V    +        LG+ K  +A +   S      
Sbjct: 139 KLR-----------QALLELRPAKNVLIDGV--------LGSGKTWVALDVCLSY----K 175

Query: 323 LHLRMEKDV-WVRTGCLPGPEYD-EMISNERKQRPELLTARSNMTYHERKLAGLCPLNAV 380
           +  +M+  + W+       PE   EM+     Q     T+RS+ + + +       ++++
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL-----RIHSI 230

Query: 381 --EVTRLLKALGAPKIARIYWAGGEPLGGKEALLPLITEFPHLYNKEDLALPVTFSC 435
             E+ RLLK       ++ Y         +  LL L     ++ N +        SC
Sbjct: 231 QAELRRLLK-------SKPY---------ENCLLVL----LNVQNAKAWN-AFNLSC 266

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 6e-06
 Identities = 61/411 (14%), Positives = 120/411 (29%), Gaps = 126/411 (30%)

Query: 1   MSKLKKQLSYISVPSQIINSLSSSSLQSLLVSPKKPSKSSFSRNSYKNPRFWFLTLFLVG 60
           +  L+K L Y   P+    S  SS+++  + S +   +       Y+N       L LV 
Sbjct: 199 LEMLQK-LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN------CL-LV- 249

Query: 61  LFGMLKLGFNLD----PPI--PFSPYPC---FTTSPR---DSFASNEQQNGQKDEILKGF 108
                     L           F+   C    TT  +   D  ++    +   D      
Sbjct: 250 ----------LLNVQNAKAWNAFN-LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298

Query: 109 N--ESQALVSKGFEDSEES---------------------------EFWKQPDGMGYRPC 139
              E ++L+ K  +   +                            + WK  +       
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358

Query: 140 LHFS------REYRKYSNAIVKDRRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVP 193
           +  S       EYRK           +  + V             +  I          P
Sbjct: 359 IESSLNVLEPAEYRKM----------FDRLSV----------FPPSAHI----------P 388

Query: 194 ILQVNVIWGDESEFSDIFDLEHF--KSVLANDV-RIVSSLPSTHIMTRPVEEKRTPLHVS 250
            + +++IW D  +   +  +      S++         S+PS ++  +   E    LH  
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH-- 446

Query: 251 PQWIRARY--LRRLNREGVLLLRGLDS--------RLSKDLPSDLQKLRCKVAFHALRFA 300
            + I   Y   +  + + ++    LD          L      +   L   V F   RF 
Sbjct: 447 -RSIVDHYNIPKTFDSDDLIPPY-LDQYFYSHIGHHLKNIEHPERMTLFRMV-FLDFRF- 502

Query: 301 PPILQLGNKL---AERMRSKGPYLSLHLRMEKDVWVRTGCLPGPEYDEMIS 348
                L  K+   +    + G  L+   +++   +    C   P+Y+ +++
Sbjct: 503 -----LEQKIRHDSTAWNASGSILNTLQQLKF--YKPYICDNDPKYERLVN 546

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 2e-05
 Identities = 66/506 (13%), Positives = 131/506 (25%), Gaps = 180/506 (35%)

Query: 14  PSQIINSLSSSSLQ---SLLVSP-----KKPSKSSFSRNSYKN--------------PR- 50
             +++       L+     L+SP     ++PS  +      ++               R 
Sbjct: 75  QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134

Query: 51  --FWFLTLFL--------VGLFGMLKLGFNLDPPIPFSPYPCFTTSPRDSFASNEQQNGQ 100
             +  L   L        V + G+L  G                   +   A +   +  
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVLGSG-------------------KTWVALDVCLS-- 173

Query: 101 KDEILKGFNESQALVSKGFEDSEES------EFWKQPDGMGYRPCLHFSREYRKYSNAIV 154
             ++    +     ++    +S E+      +   Q D        H S    +  +   
Sbjct: 174 -YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232

Query: 155 KDRR-----KY---LLVV--VSGGMNQQRNQIVDA-------VVIAR------ILGAALV 191
           + RR      Y   LLV+  V      Q  +  +A       ++  R       L AA  
Sbjct: 233 ELRRLLKSKPYENCLLVLLNV------QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT 286

Query: 192 VPILQVNVIWGDESEFSDIFDLEHFKSVLANDVRI-VSSLPSTHIMTRPVEEKRTPLHVS 250
             I   +               +  KS+L   +      LP              P  +S
Sbjct: 287 THISLDHHSMT--------LTPDEVKSLLLKYLDCRPQDLP-------REVLTTNPRRLS 331

Query: 251 ------PQWI-RARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFHALRFAPPI 303
                    +      + +N +   L   ++S L+   P++ +K+               
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDK--LTTIIESSLNVLEPAEYRKM--------------- 374

Query: 304 LQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGCLP-----GPEYD-EMISNE------- 350
                           +  L +       + T  L        + D  ++ N+       
Sbjct: 375 ----------------FDRLSV-FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV 417

Query: 351 RKQRPE-----------LLTARSNMTYHERKLAGLCPLNAVEVTRLLK--ALGAPKIAR- 396
            KQ  E           L     N     R +     ++   + +      L  P + + 
Sbjct: 418 EKQPKESTISIPSIYLELKVKLENEYALHRSI-----VDHYNIPKTFDSDDLIPPYLDQY 472

Query: 397 IYWAGGEPLGGKEALLPLITEFPHLY 422
            Y   G  L   E     +T F  ++
Sbjct: 473 FYSHIGHHLKNIE-HPERMTLFRMVF 497

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	455
4ap5_A	408	GDP-fucose protein O-fucosyltransferase 2; GT-B, G	98.71
3zy2_A	362	Putative GDP-fucose protein O-fucosyltransferase;	96.84
2hhc_A	330	NODZ, nodulation fucosyltransferase NODZ; glycosyl	92.68

>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A*

Probab=98.71  E-value=6.5e-07  Score=90.28  Aligned_cols=254  Identities=14%  Similarity=0.153  Sum_probs=132.8

Q ss_pred             CCcceEEEEEc-C-CchhhHHHHHHHHHHHHHhCCe----EeecccccccccCCC------CCCCCCCChHHHHHhccCC
Q 012839          156 DRRKYLLVVVS-G-GMNQQRNQIVDAVVIARILGAA----LVVPILQVNVIWGDE------SEFSDIFDLEHFKSVLAND  223 (455)
Q Consensus       156 ~snGYL~V~~n-G-GLNQqR~~IcDAVaVARiLNAT----LViP~Ld~~s~W~D~------S~F~DIFDvdhFI~sL~~D  223 (455)
                      ..++||+-..| | |.|.||...-.|.++|+.||.|    ||||-...-.-|.-.      -.|++.||++++    +..
T Consensus        20 ~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~~~   95 (408)
T 4ap5_A           20 SRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----NKN   95 (408)
T ss_dssp             CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----HTT
T ss_pred             cccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----Hhh
Confidence            46899999875 4 8999999999999999999999    999976533334332      259999999864    334


Q ss_pred             eEEe------ccC-----c---------ccccc---cCCccc-----------ccCCCCCChhhHHh-------------
Q 012839          224 VRIV------SSL-----P---------STHIM---TRPVEE-----------KRTPLHVSPQWIRA-------------  256 (455)
Q Consensus       224 VrIV------k~L-----P---------~~~~~---~~~~~~-----------~~vp~~~spswy~~-------------  256 (455)
                      |+||      ++.     |         .....   ......           ...-....|.|-..             
T Consensus        96 vpVI~meeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v~~~~~~c~~~~  175 (408)
T 4ap5_A           96 IPVIEYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETRGLNVSCLSVQ  175 (408)
T ss_dssp             SCEEEHHHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTCEEEEEEEEEEC
T ss_pred             CCeeEHHHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCcccccccccCCceeEEEe
Confidence            4444      111     1         00000   000000           00000011223111             


Q ss_pred             ----HhhHhhhcc---ceEEEeccccccCCC-CchhhhhhhhhhcccceeechhHHHHHHHHHHHHHcCCCeeeeecccc
Q 012839          257 ----RYLRRLNRE---GVLLLRGLDSRLSKD-LPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRME  328 (455)
Q Consensus       257 ----~vlP~L~k~---~VI~l~~~d~RLa~~-lP~eiQrLRCrvnf~ALrF~p~I~~Lg~~LV~Rmr~~GpyIALHLRfE  328 (455)
                          .+.|.+.+.   .-+-+..+...|++. -..+...+|     ..|+|++.|.+.|++.++..- .++|+++|+|.+
T Consensus       176 ~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~~-----r~l~~s~~l~~~a~~fi~~~L-~~~~~~~h~r~~  249 (408)
T 4ap5_A          176 GSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTR-----RSMVFARHLREVGDEFRSRHL-NSTDDADRIPFQ  249 (408)
T ss_dssp             SBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHHH-----HTCCBCHHHHHHHHHHHHHHH-CCCTTTTTCCCC
T ss_pred             ecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhHH-----HHhhhhHHHHHHHHHHHHHHh-Ccccceeecccc
Confidence                112333222   222333444444422 223333333     379999999999999988766 468999999999


Q ss_pred             chhhhhcccCCCchhhHHHHHHHhhhhhhhhcccCCChHhhhcCCCCCCCHHHHH-HHHHHhCCCCCceEEEeeCCCCCC
Q 012839          329 KDVWVRTGCLPGPEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVT-RLLKALGAPKIARIYWAGGEPLGG  407 (455)
Q Consensus       329 kDMlAfSgC~~g~e~~El~~~~R~~~~~~~~~~~~i~~~~~R~~G~CPLTPeEVg-l~LrALGf~~~T~IYlAsGeiYGg  407 (455)
                      .|+...  |.......-      ..+-.+ +.+. -+.  ......|=.+-++++ -+.+.|.=-+-+.||||+-+   .
T Consensus       250 ~dw~~~--~~~~~~~~~------~~y~~~-H~Rr-~d~--~~~~~~~~ps~~~~~~~i~~~~~~~~~~~VyiATD~---~  314 (408)
T 4ap5_A          250 EDWMKM--KVKLGSALG------GPYLGV-HLRR-KDF--IWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDA---V  314 (408)
T ss_dssp             SSGGGC--CCCTTCBCC------EEEEEE-EECC-TTT--TTTTCSSSCCHHHHHHHHHHHHHHHTCSCEEEEECC---C
T ss_pred             hhHhhh--hcccccccC------CCcccc-cccc-ccc--hhhhhccCCCHHHHHHHHHHHHHhcCCCEEEEeCCC---c
Confidence            887653  433210000      000000 0000 000  000112312223332 22222222244679999985   4


Q ss_pred             ccccccHHhhCCCCcccccCCChhhhhhh
Q 012839          408 KEALLPLITEFPHLYNKEDLALPVTFSCL  436 (455)
Q Consensus       408 ~~~L~pL~~~FPnl~tKetLat~eEL~p~  436 (455)
                      +..+.-|++.+|.++.-..  ..+++..+
T Consensus       315 ~~~~~~l~~~~~~~~~~~~--~~~~~~~~  341 (408)
T 4ap5_A          315 RKEYEELKKLLPEMVRFEP--TWEELELY  341 (408)
T ss_dssp             HHHHHHHHHHCTTEECCCC--CHHHHHHH
T ss_pred             hhHHHHHHHhCCCcEEecC--cchhhhcc
Confidence            4457889999998765433  34455444

>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*

Probab=96.84  E-value=0.0047  Score=62.95  Aligned_cols=230  Identities=17%  Similarity=0.296  Sum_probs=125.0

Q ss_pred             CCcceEEEE-EcCCchhhHHHHHHHHHHHHHhCCeEeecccccccccCCCC---CCCCCCChHHHHHhccCCeEEec--c
Q 012839          156 DRRKYLLVV-VSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDES---EFSDIFDLEHFKSVLANDVRIVS--S  229 (455)
Q Consensus       156 ~snGYL~V~-~nGGLNQqR~~IcDAVaVARiLNATLViP~Ld~~s~W~D~S---~F~DIFDvdhFI~sL~~DVrIVk--~  229 (455)
                      .+||||+-= |-|-.-+|-...--+.+.|+.||.|||||-+-.-.. +. +   .|++-|+++.    |+..-|||.  +
T Consensus         6 d~~Gyi~yCPCMGRFGNQadhfLG~LafAk~lnRTLvlPpwi~y~~-~~-~~~vpf~~yF~v~~----l~~yhrvi~me~   79 (362)
T 3zy2_A            6 DPNGYIVFCPCMGRFGNQVDQFLGVLAFAKALDRTLVLPNFIEFKH-PE-TKMIPFEFLFQVGT----VAKYTRVVTMQE   79 (362)
T ss_dssp             CTTCEEEECCCSSSHHHHHHHHHHHHHHHHHHTCEEECCCEEECSS-SS-CEEECHHHHBCHHH----HTTTSCEECHHH
T ss_pred             CCCccEEeCCCcCccccHHHHHHHHHHHHHhhCceEecCccccccC-Cc-ccccchhheeecch----hhhhceeeeHHH
Confidence            469999875 889999999999999999999999999997642211 11 3   3777777765    333334432  1


Q ss_pred             ----C-----ccccc-----c-c--------CCccccc--CC-----------CCCC----h-----hh----HHhHhhH
Q 012839          230 ----L-----PSTHI-----M-T--------RPVEEKR--TP-----------LHVS----P-----QW----IRARYLR  260 (455)
Q Consensus       230 ----L-----P~~~~-----~-~--------~~~~~~~--vp-----------~~~s----p-----sw----y~~~vlP  260 (455)
                          |     |.+-.     . +        .+.+..+  .|           +..+    +     +|    +.++...
T Consensus        80 Fm~~lap~~WP~~~R~~~C~~~~~~~~~~~~~~~C~~K~GNPFgpfWd~f~v~F~~se~~~~~~~~l~~~~~~~~~~W~~  159 (362)
T 3zy2_A           80 FTKKIMPTVWPPEKRKAFCWTPRQAIYDKSAEPGCHSKEGNPFGPYWDQIDVSFVGDEYFGDIPGGFDLNQMGSRKKWLE  159 (362)
T ss_dssp             HHHHTHHHHSCGGGCEEEESSCBC-------CCBCCTTSSTTHHHHHHHTTCCCCEEEECTTSTTTTCC-------CHHH
T ss_pred             HHHHhccccCCcccceEeeccccccccCCCCCCCCCCCCCCCCCcchhccccccccceeccCccccccccchhHHHHHHH
Confidence                1     11100     0 0        0001100  11           1000    0     11    1111111


Q ss_pred             h--hhccceEEEeccccccC-CCCchhhhhhhhhhcccceeechhHHHHHHHHHHHHHcCCCeeeeeccccchhhhhccc
Q 012839          261 R--LNREGVLLLRGLDSRLS-KDLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGC  337 (455)
Q Consensus       261 ~--L~k~~VI~l~~~d~RLa-~~lP~eiQrLRCrvnf~ALrF~p~I~~Lg~~LV~Rmr~~GpyIALHLRfEkDMlAfSgC  337 (455)
                      .  -.+|=|+.|++.-.--. ..---.|||        -|++++.|.+.|++.++.--.+ ||||+|||-=.|+.-.  |
T Consensus       160 ~~p~~~~pVlAf~gaPa~FPv~~e~r~Lqk--------Ym~WS~~i~~~a~~fI~~~L~r-pyVgIHLR~G~DW~~a--C  228 (362)
T 3zy2_A          160 KFPSEEYPVLAFSSAPAPFPSKGKVWSIQK--------YLRWSSRITEQAKKFISANLAK-PFVAVHLRNDADWVRV--C  228 (362)
T ss_dssp             HSCTTTCSEEEESSCSSCSSCCGGGGGGGG--------GCCBCHHHHHHHHHHHHHHCCS-SEEEEEECCCHHHHHH--H
T ss_pred             hCCcccCceEeecCCCCCCCcChhhHhHHH--------hccccHHHHHHHHHHHHHhcCC-CeEEEEEecCCcHHHH--H
Confidence            1  23678888874322111 000013443        6899999999999999885544 9999999998888754  7


Q ss_pred             CCCchh--hHHHHHHHhhhhhhh---hcccCCChHhhhcCCCCCCCHHH----HHHHHHHhCCCCCceEEEeeCCCCCCc
Q 012839          338 LPGPEY--DEMISNERKQRPELL---TARSNMTYHERKLAGLCPLNAVE----VTRLLKALGAPKIARIYWAGGEPLGGK  408 (455)
Q Consensus       338 ~~g~e~--~El~~~~R~~~~~~~---~~~~~i~~~~~R~~G~CPLTPeE----Vgl~LrALGf~~~T~IYlAsGeiYGg~  408 (455)
                      .+-...  ..+.+     .+.-.   .....++      ...|==+-++    +...++.+   +-..||||+..    +
T Consensus       229 ~hlk~~~~~~lfa-----SPQC~Gy~~~~~~lt------~emClPSle~I~rqIk~~vk~~---~lksVFIATDa----~  290 (362)
T 3zy2_A          229 EHIDTTTNRPLFA-----SEQCLGEGHHLGTLT------KEICSPSKQQILEQIVEKVGSI---GAKSVFVASDK----D  290 (362)
T ss_dssp             HTCCTTTCCCCTT-----THHHHCGGGTTCCCC------HHHHSCCHHHHHHHHHHHHHHH---TCSEEEEEESS----C
T ss_pred             hhhccccCccccc-----CCcccCCcccCcccc------hhccCCCHHHHHHHHHHHHHhc---CCcEEEEecCC----H
Confidence            653110  00000     00000   0000011      0124112222    44555665   46789999984    4


Q ss_pred             cccccHHhhCCC
Q 012839          409 EALLPLITEFPH  420 (455)
Q Consensus       409 ~~L~pL~~~FPn  420 (455)
                      ..++-|+++|+.
T Consensus       291 ~~~~ELk~~L~~  302 (362)
T 3zy2_A          291 HMIDEINEALKP  302 (362)
T ss_dssp             CCHHHHHHHHGG
T ss_pred             HHHHHHHHHhhc
Confidence            467889999985

>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A*

Probab=92.68  E-value=0.52  Score=45.56  Aligned_cols=40  Identities=15%  Similarity=0.200  Sum_probs=35.3

Q ss_pred             CcceEEEEEcCCchhhHHHHHHHHHHHHHhCCeEeecccc
Q 012839          157 RRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQ  196 (455)
Q Consensus       157 snGYL~V~~nGGLNQqR~~IcDAVaVARiLNATLViP~Ld  196 (455)
                      +..||++...|||-.|--+++.|-++|...|.+|+|--..
T Consensus         3 ~~r~iv~~~~gGLGNqm~~~a~a~~~A~~t~r~l~vd~~~   42 (330)
T 2hhc_A            3 KERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVIDWRG   42 (330)
T ss_dssp             CCCEEEEECCSCHHHHHHHHHHHHHHHHHHTCEEEEECBT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHHHHHHhCCEEEEECCC
Confidence            4579999999999888899999999999999999886443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00