Citrus Sinensis ID: 012891

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450----
Protein Sequence
MSRFSWLRLSRRQLLSSTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWLYQQLSTG
Secondary Structure (PSIPRED)
cccccEEEEcccccccccccccccccccEEccccccccccEEccccccccccccccccccccccccccEEEcccccccccccccEEEccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEHHHHHccccEEEEEccccccccccccccccccccccccccccccEEEEccccccccccccccEEcccccccccccEEEEEEEEEEEEcccccccccEEEEcccccccccccccccEEEEEEEEcccccEEccccEEEEEEccHHHHcccccEEEEccccEEEEEcccccccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHHHHHHcccccccccccHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccEHHHHcHHHHHccccccccccccHHHHHHHcccHHHHHccccEEEccccccHHHHcHHHHHHcEEEEEccccHHHccccHHHHHcccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccEEEEEEEHHHHHcccEEEEEEccccEcccccccccccccccccccccccccEEEEEEEEEcccccccccEEEcccccccccccEEEEEEEEEEEEccccccccEEEEcccccccccccccccEEEEEEEEccccEEEccccEEEEEEEcHHHHHccccEEEEccccEEEEEEccccccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHHHHHcccccccccccccHHHHcccc
Coil and Loop (DISEMBL)
msrfswlrLSRRQLLSstavespinkshclqkaatlpqsilhkrglyycssvtgtladfgttGMFLARRCIhatgscysskrdpyellgvpenasQDEIKKAFHMLAKqyhpdanknnpsaKRKFQEIRDAYETLRDSEKraqydrrrsrgsenekysagdaegfryagdaeGFRYAYQTHFSDSFHKIFSEIFedetshfapdIQVELVLSFAEAAKgctkhvsfdafvpcdschgrgfpadaktkicstcrgigrvtippftstcstckglgriikdhcmtckgsgvvdgvkevkvtipagvdsgdtirvpeagnaggrgrqhgNLFIKlkvaddpifsrdgadvyvdsniSFTQAilggkvdvptlsgkvqvkipkgvqpgqllVLRGkglaknglfldhgdqyVRFRVNFPTALNERQRAILEEFAEEeinnenntsaeENWLYQQLSTG
Flexible Loop (DISEMBL)
msrfswlrlsrRQLLsstavespinkshclqKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQyhpdanknnpsakrKFQEIRDAYetlrdsekraqydrrrsrgsenekysagdaegFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCrgigrvtippftstcSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTipagvdsgdtirvpeagnaggrgrqhgNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVqvkipkgvqpgqLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEeeinnenntsaeenwlyqqlstg
Low Complexity Region (SEG)
MsrfswlrlsrrqllssTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILeefaeeeinnenntsaeenWLYQQLSTG
Disordered region (IsUnstruct)
*************************KSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLG**************************************************************************GFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRV*********GRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILE***************************
Disordered Region (DISOPRED)
*SRFSW*RLSRR***************************ILHKRGLYYCSSVTG**ADFG**GMFLA***IH*****YSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEK******EGFRYAGDAEGFRYAYQTHFSDSF*********************ELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR**********GRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKN**FLDHGDQYVRFRVNFPTALNERQRAILE********************YQQLST*
Disordered Region (DISEMBL)
********LSRRQLLSSTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE******************SAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWLYQQLSTG
Disordered Region (DISPRO)
*****W******QLLS*TAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI*EDE**HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRG*PADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEI********************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRFSWLRLSRRQLLSSTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWLYQQLSTG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	454	2.2.26 [Sep-21-2011]
Q38813	408	Chaperone protein dnaJ 1,	yes	no	0.832	0.926	0.647	1e-146
A7MIK3	379	Chaperone protein DnaJ OS	yes	no	0.751	0.899	0.381	1e-64
Q8K9Y9	378	Chaperone protein DnaJ OS	yes	no	0.746	0.896	0.379	2e-64
A6T4F5	377	Chaperone protein DnaJ OS	yes	no	0.779	0.938	0.380	4e-64
Q6F6R1	368	Chaperone protein DnaJ OS	yes	no	0.788	0.972	0.379	5e-64
B5Y241	377	Chaperone protein DnaJ OS	yes	no	0.779	0.938	0.378	6e-64
B8CXL0	375	Chaperone protein DnaJ OS	yes	no	0.766	0.928	0.382	2e-63
P0A1G7	379	Chaperone protein DnaJ OS	yes	no	0.748	0.897	0.383	3e-63
P0A1G8	379	Chaperone protein DnaJ OS	N/A	no	0.748	0.897	0.383	3e-63
B4TVZ6	379	Chaperone protein DnaJ OS	yes	no	0.748	0.897	0.383	3e-63

>sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial OS=Arabidopsis thaliana GN=ATJ1 PE=2 SV=2

 Score =  519 bits (1336), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 252/389 (64%), Positives = 308/389 (79%), Gaps = 11/389 (2%)

Query: 66  LARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKF 125
           L  R IHATG   SS R+ Y++LGV   A+++EIKK+FH LAK++HPD N+NNPSAKRKF
Sbjct: 31  LFERYIHATGINNSSARNYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNNPSAKRKF 90

Query: 126 QEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDS 185
           QEIR+AYETL +SE+R +YD+ + R S+   Y   D       GD+E FR AYQ++FSD+
Sbjct: 91  QEIREAYETLGNSERREEYDKLQYRNSD---YVNNDG------GDSERFRRAYQSNFSDT 141

Query: 186 FHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
           FHKIFSEIFE+  +   PDI+VEL LS +EAA+GCTK +SFDA+V CDSC G G P+DA 
Sbjct: 142 FHKIFSEIFEN--NQIKPDIRVELSLSLSEAAEGCTKRLSFDAYVFCDSCDGLGHPSDAA 199

Query: 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
             IC TCRG+GRVTIPPFT++C TCKG G IIK++CM+C+GSG+V+G K  ++ IP GV+
Sbjct: 200 MSICPTCRGVGRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEGTKTAELVIPGGVE 259

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           S  TI +  AGN   R  Q GNL+IKLKVA+D  F+RDG+D+YVD+NISFTQAILGGKV 
Sbjct: 260 SEATITIVGAGNVSSRTSQPGNLYIKLKVANDSTFTRDGSDIYVDANISFTQAILGGKVV 319

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAI 425
           VPTLSGK+Q+ IPKG QP QLLVLRGKGL K G F+DHGDQYVRFRVNFPT +NERQRAI
Sbjct: 320 VPTLSGKIQLDIPKGTQPDQLLVLRGKGLPKQGFFVDHGDQYVRFRVNFPTEVNERQRAI 379

Query: 426 LEEFAEEEINNENNTSAEENWLYQQLSTG 454
           LEEFA+EEINNE + SAE +WLYQ+LSTG
Sbjct: 380 LEEFAKEEINNELSDSAEGSWLYQKLSTG 408

Have a continuous role in plant development probably in the structural organization of compartments.
Arabidopsis thaliana (taxid: 3702)

>sp|A7MIK3|DNAJ_CROS8 Chaperone protein DnaJ OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=dnaJ PE=3 SV=1

 Score =  247 bits (631), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 137/359 (38%), Positives = 203/359 (56%), Gaps = 18/359 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D YE+LGVP+ A + EIKKA+  LA ++HPD N+ +  A+ KF+EI++AYE L D++
Sbjct: 2   AKKDYYEILGVPKTADEREIKKAYKRLAMKFHPDRNQGDKEAEAKFKEIKEAYEILTDAQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
           KRA YD          +Y     E     G   G  +     FSD F  +F +IF     
Sbjct: 62  KRAAYD----------QYGHAAFEQGGMGGGGFGGGFGNGADFSDIFGDVFGDIFGGGRG 111

Query: 200 HFAP---DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIG 256
             A    D++  + L+  EA +G TK +       C+ CHG G    ++ + C TC G G
Sbjct: 112 RRASRGADLRYNMELTLEEAVRGVTKEIRIPTLEECEVCHGSGAKPGSQPQTCPTCHGAG 171

Query: 257 RVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRV 312
           +V +         TC  C+G G +IKD C +C G G ++  K + V IPAGVD+GD IR+
Sbjct: 172 QVQMRQGFFAVQQTCPHCQGRGTLIKDPCNSCHGHGRIEKTKTLSVKIPAGVDTGDRIRL 231

Query: 313 PEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK 372
              G AG +G   G+L+++++V   PIF R+G ++Y +  I+F  A LGG+++VPTL G+
Sbjct: 232 AGEGEAGEQGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGR 291

Query: 373 VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAE 431
           V +K+P   Q G+L  +RGKG+ K+      GD   R  V  P  LN+RQ+A+L+E  E
Sbjct: 292 VMLKVPSETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPVGLNDRQKALLQELQE 349

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Cronobacter sakazakii (strain ATCC BAA-894) (taxid: 290339)

>sp|Q8K9Y9|DNAJ_BUCAP Chaperone protein DnaJ OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=dnaJ PE=3 SV=1

 Score =  247 bits (630), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 136/358 (37%), Positives = 203/358 (56%), Gaps = 19/358 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D Y++LG+P++A + EIKKA+  LA +YHPD N+ + +A+ KF+EI++AYE L + E
Sbjct: 2   AKKDYYQILGIPKSAEEREIKKAYKRLAMKYHPDRNQGDKNAENKFKEIKEAYEILINEE 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIF---ED 196
           KR  YD+      EN     G  +   Y+       +   T F D F  +F +IF    +
Sbjct: 62  KRTAYDQYGHAAFEN-----GYNQNNTYS------TFTSSTDFGDIFGDVFGDIFGGSRN 110

Query: 197 ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIG 256
           +      D+   + +S  EA KG TK +    F  C +C+G G     K   CSTC G G
Sbjct: 111 QRVKKGADLCYNMEISLEEAVKGTTKEIRIPTFQKCKTCYGMGTSTGTKPNGCSTCHGKG 170

Query: 257 RVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRV 312
           ++ I    FT   +C TC G+G +IK+ C  C+G G +   K + V IP G+D+ D IR+
Sbjct: 171 QIHIRKGFFTVQQSCPTCNGIGTVIKNPCRMCRGQGRIKTNKTLSVKIPPGIDTNDKIRL 230

Query: 313 PEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK 372
            + G AG  G Q G+L++++KV   PIF R+  ++Y +  I+FT A LGG+++VPTL G+
Sbjct: 231 SKEGEAGTNGAQPGDLYVQMKVNKHPIFEREENNLYCEVPINFTMAALGGEIEVPTLDGR 290

Query: 373 VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFA 430
           V +KIP   Q G+L  +RGKG+ K+      GD   R  V  P  LNE+Q+ +L E  
Sbjct: 291 VNLKIPSETQSGKLFRIRGKGV-KSVQSRSRGDLLCRVVVETPVNLNEKQKYLLSELG 347

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) (taxid: 198804)

>sp|A6T4F5|DNAJ_KLEP7 Chaperone protein DnaJ OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dnaJ PE=3 SV=1

 Score =  245 bits (626), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/378 (38%), Positives = 209/378 (55%), Gaps = 24/378 (6%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D YE+LGV + A + EIKKA+  LA +YHPD N+ +  A+ KF+EI++AYE L D++
Sbjct: 2   AKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEILTDAQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           KRA YD+             G A  F   G   G  +     FSD F  +F +IF     
Sbjct: 62  KRAAYDQ------------YGHA-AFEQGGMGGGGGFGGGADFSDIFGDVFGDIFGGGRG 108

Query: 197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
            + +    D++  + L+  EA +G TK +       CD CHG G  A +K + C TC G 
Sbjct: 109 RQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGSKPQTCPTCHGA 168

Query: 256 GRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
           G+V +         TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct: 169 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVEKTKTLSVKIPAGVDTGDRIR 228

Query: 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
           +   G AG  G   G+L+++++V    IF R+G ++Y +  I+FT A LGG+++VPTL G
Sbjct: 229 LAGEGEAGEHGAPAGDLYVQVQVKQHAIFEREGNNLYCEVPINFTMAALGGEIEVPTLDG 288

Query: 372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAE 431
           +V +KIP   Q G+L  +RGKG+ K+      GD   R  V  P  LNE+Q+ +L+E  E
Sbjct: 289 RVNLKIPGETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPVGLNEKQKQLLKELQE 347

Query: 432 E--EINNENNTSAEENWL 447
                  ENN+   +++ 
Sbjct: 348 SFGGPTGENNSPRSKSFF 365

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) (taxid: 272620)

>sp|Q6F6R1|DNAJ_ACIAD Chaperone protein DnaJ OS=Acinetobacter sp. (strain ADP1) GN=dnaJ PE=3 SV=1

 Score =  245 bits (626), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 144/379 (37%), Positives = 209/379 (55%), Gaps = 21/379 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV + AS DEIKKA+  LA +YHPD N +N  A+ KF+E  +AYE L DSE
Sbjct: 2   AKRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEDKFKEASEAYEVLSDSE 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIF-SEIFEDET 198
           KR+ YDR      E                 AE       + F D F   F     + + 
Sbjct: 62  KRSMYDRMGHNAFEGGGGGG------FGGFSAEDIF----SQFGDIFGGAFGGGGRQQQR 111

Query: 199 SHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRV 258
                D++  + LS  EA +G  K ++F A  PC+ C G+G       + C TC G G+V
Sbjct: 112 QRRGSDLRYVMELSLEEAVRGVKKTITFTAPAPCEVCDGKGSKNPNDVETCRTCHGTGQV 171

Query: 259 TIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPE 314
            +         TC TC+G G+IIK+ C +C GSGV D  + ++VTIPAGVD+GD +R+  
Sbjct: 172 RMQQGFFSVQQTCGTCRGQGKIIKNPCQSCHGSGVADRQQTLEVTIPAGVDNGDRVRLSG 231

Query: 315 AGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQ 374
            G A  R  Q G+L++++ V +  IF RDGAD+Y+D  +S   A LG ++++PTL G+V 
Sbjct: 232 KGEA-VRDGQAGDLYVEVVVREHEIFQRDGADLYMDVPVSIADAALGKEIEIPTLEGRVS 290

Query: 375 VKIPKGVQPGQLLVLRGKGL--AKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432
           +KIP+G Q G+L  LRGKG+   ++ +    GD   R  V  P  L  RQR + +E    
Sbjct: 291 LKIPEGTQTGKLFRLRGKGVRPVRSSMV---GDLLCRVVVETPVNLTSRQRELFKELQAT 347

Query: 433 EINNENNTSAEENWLYQQL 451
              +E+++S ++   + +L
Sbjct: 348 LDGDEHSSSPKKKSFFDRL 366

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Acinetobacter sp. (strain ADP1) (taxid: 62977)

>sp|B5Y241|DNAJ_KLEP3 Chaperone protein DnaJ OS=Klebsiella pneumoniae (strain 342) GN=dnaJ PE=3 SV=1

 Score =  245 bits (625), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 143/378 (37%), Positives = 209/378 (55%), Gaps = 24/378 (6%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D YE+LGV + A + EIKKA+  LA +YHPD N+ +  A+ KF+EI++AYE L D++
Sbjct: 2   AKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEILTDAQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           KRA YD+             G A  F   G   G  +     FSD F  +F +IF     
Sbjct: 62  KRAAYDQ------------YGHA-AFEQGGMGGGGGFGGGADFSDIFGDVFGDIFGGGRG 108

Query: 197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
            + +    D++  + L+  EA +G TK +       CD CHG G  A +K + C TC G 
Sbjct: 109 RQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGSKPQTCPTCHGA 168

Query: 256 GRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
           G+V +         TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct: 169 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVEKTKTLSVKIPAGVDTGDRIR 228

Query: 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
           +   G AG  G   G+L+++++V    IF R+G ++Y +  I+FT A LGG+++VPTL G
Sbjct: 229 LAGEGEAGEHGAPAGDLYVQVQVKQHAIFEREGNNLYCEVPINFTMAALGGEIEVPTLDG 288

Query: 372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAE 431
           +V +K+P   Q G+L  +RGKG+ K+      GD   R  V  P  LNE+Q+ +L+E  E
Sbjct: 289 RVSLKVPGETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPVGLNEKQKQLLKELQE 347

Query: 432 E--EINNENNTSAEENWL 447
                  ENN+   +++ 
Sbjct: 348 SFGGPTGENNSPRSKSFF 365

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Klebsiella pneumoniae (strain 342) (taxid: 507522)

>sp|B8CXL0|DNAJ_HALOH Chaperone protein DnaJ OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1

 Score =  243 bits (621), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/376 (38%), Positives = 205/376 (54%), Gaps = 28/376 (7%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
           ++ +D YE+LGV  +A Q EIKKA+  LA++YHPD NK++P A+ KF+EI +AYE L D 
Sbjct: 2   ATSKDYYEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSDP 61

Query: 139 EKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDET 198
           +KRA+YD+    G   E ++  D     + G            F D F   F        
Sbjct: 62  DKRARYDQYGHAGINEEDFNFEDFAQRGFGG------------FDDIFDMFFGGGMGRRR 109

Query: 199 SHFA--PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIG 256
                  D+Q  + + F +AA G TK ++      CD+C+G G       K C  C G G
Sbjct: 110 RGPRPGADLQYRMKIPFEDAAFGTTKKITIPRTETCDTCNGTGAKPGTSPKTCPQCNGSG 169

Query: 257 RVTIP---PF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308
           +V      PF     T TC  C G G II D C TC+GSG V   +++ V IP GVD+G 
Sbjct: 170 QVRYTQRTPFGQFAQTRTCDRCGGRGTIIDDPCPTCQGSGKVRKQRKITVKIPPGVDTGT 229

Query: 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPT 368
            +R+P  G AG +G  +G+L+I ++V    IF R   D+Y +  ISF QA LG K++VPT
Sbjct: 230 RLRMPNEGEAGDKGAPNGDLYIIIEVEPHDIFERKDDDIYCEVPISFVQAALGDKIEVPT 289

Query: 369 LSGKVQVKIPKGVQPGQLLVLRGKGLAK-NGLFLDHGDQYVRFRVNFPTALNERQRAILE 427
           L GKV+  IP+G QP  +  L+ KG+   NG     GD++++ RV  P  +N+ Q+ +L 
Sbjct: 290 LEGKVKFTIPEGTQPDTVFRLKNKGIPHLNG--RGRGDEFIKVRVVIPEKMNDEQKELLR 347

Query: 428 EFAE---EEINNENNT 440
           +FAE   +EIN E  +
Sbjct: 348 KFAEISGDEINPEQKS 363

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) (taxid: 373903)

>sp|P0A1G7|DNAJ_SALTY Chaperone protein DnaJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=dnaJ PE=3 SV=2

 Score =  242 bits (618), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/360 (38%), Positives = 200/360 (55%), Gaps = 20/360 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV + A + EIKKA+  LA +YHPD N+ +  A+ KF+EI++AYE L D++
Sbjct: 2   AKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           KRA YD+      E      G   GF    D           FSD F  +F +IF     
Sbjct: 62  KRAAYDQYGHAAFEQGGMGGGFGGGFNGGAD-----------FSDIFGDVFGDIFGGGRG 110

Query: 197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
            + +    D++  + L+  EA +G TK +       CD CHG G  A  + + C TC G 
Sbjct: 111 RQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGS 170

Query: 256 GRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
           G+V +         TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct: 171 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAGVDTGDRIR 230

Query: 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
           +   G AG  G   G+L+++++V   PIF R+G ++Y +  I+F  A LGG+++VPTL G
Sbjct: 231 LAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG 290

Query: 372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAE 431
           +V +K+P   Q G+L  +RGKG+ K+      GD   R  V  P  L+E+Q+ +L++  E
Sbjct: 291 RVMLKVPSETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPVGLSEKQKQLLKDLQE 349

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity). Necessary for invasion of epithelial cells, secretion of invasion proteins and proliferation within macrophages.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

>sp|P0A1G8|DNAJ_SALTI Chaperone protein DnaJ OS=Salmonella typhi GN=dnaJ PE=3 SV=2

 Score =  242 bits (618), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/360 (38%), Positives = 200/360 (55%), Gaps = 20/360 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV + A + EIKKA+  LA +YHPD N+ +  A+ KF+EI++AYE L D++
Sbjct: 2   AKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           KRA YD+      E      G   GF    D           FSD F  +F +IF     
Sbjct: 62  KRAAYDQYGHAAFEQGGMGGGFGGGFNGGAD-----------FSDIFGDVFGDIFGGGRG 110

Query: 197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
            + +    D++  + L+  EA +G TK +       CD CHG G  A  + + C TC G 
Sbjct: 111 RQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGS 170

Query: 256 GRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
           G+V +         TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct: 171 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAGVDTGDRIR 230

Query: 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
           +   G AG  G   G+L+++++V   PIF R+G ++Y +  I+F  A LGG+++VPTL G
Sbjct: 231 LAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG 290

Query: 372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAE 431
           +V +K+P   Q G+L  +RGKG+ K+      GD   R  V  P  L+E+Q+ +L++  E
Sbjct: 291 RVMLKVPSETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPVGLSEKQKQLLKDLQE 349

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Salmonella typhi (taxid: 90370)

>sp|B4TVZ6|DNAJ_SALSV Chaperone protein DnaJ OS=Salmonella schwarzengrund (strain CVM19633) GN=dnaJ PE=3 SV=1

 Score =  242 bits (618), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/360 (38%), Positives = 200/360 (55%), Gaps = 20/360 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV + A + EIKKA+  LA +YHPD N+ +  A+ KF+EI++AYE L D++
Sbjct: 2   AKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           KRA YD+      E      G   GF    D           FSD F  +F +IF     
Sbjct: 62  KRAAYDQYGHAAFEQGGMGGGFGGGFNGGAD-----------FSDIFGDVFGDIFGGGRG 110

Query: 197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
            + +    D++  + L+  EA +G TK +       CD CHG G  A  + + C TC G 
Sbjct: 111 RQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGS 170

Query: 256 GRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
           G+V +         TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct: 171 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAGVDTGDRIR 230

Query: 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
           +   G AG  G   G+L+++++V   PIF R+G ++Y +  I+F  A LGG+++VPTL G
Sbjct: 231 LAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG 290

Query: 372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAE 431
           +V +K+P   Q G+L  +RGKG+ K+      GD   R  V  P  L+E+Q+ +L++  E
Sbjct: 291 RVMLKVPSETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPVGLSEKQKQLLKDLQE 349

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Salmonella schwarzengrund (strain CVM19633) (taxid: 439843)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	454
255545870	494	chaperone protein DNAj, putative [Ricinu	0.988	0.908	0.699	1e-177
302142020	470	unnamed protein product [Vitis vinifera]	0.958	0.925	0.668	1e-175
225459166	462	PREDICTED: chaperone protein dnaJ 1, mit	0.936	0.919	0.683	1e-174
449515496	444	PREDICTED: chaperone protein dnaJ 1, mit	0.977	1.0	0.656	1e-169
449470084	460	PREDICTED: chaperone protein dnaJ 1, mit	0.995	0.982	0.647	1e-166
356498819	445	PREDICTED: chaperone protein dnaJ 1, mit	0.977	0.997	0.663	1e-165
26451496	408	putative AtJ1 [Arabidopsis thaliana]	0.832	0.926	0.647	1e-144
30690263	408	chaperone protein dnaJ 1 [Arabidopsis th	0.832	0.926	0.647	1e-144
15217871	427	chaperone protein dnaJ 1 [Arabidopsis th	0.814	0.866	0.643	1e-140
297845768	427	hypothetical protein ARALYDRAFT_473029 [	0.814	0.866	0.640	1e-139

>gi|255545870|ref|XP_002513995.1| chaperone protein DNAj, putative [Ricinus communis] gi|223547081|gb|EEF48578.1| chaperone protein DNAj, putative [Ricinus communis]

 Score =  629 bits (1621), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 326/466 (69%), Positives = 374/466 (80%), Gaps = 17/466 (3%)

Query: 1   MSRFSWLR--LSRRQLLSSTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLAD 58
           M R+ WL     RR LLSS AVES +N+ H  +K +TL Q +   R  + CS V    + 
Sbjct: 1   MGRYGWLATLCRRRHLLSSAAVESTVNRGHWHRKISTLRQHLCRDRCFHSCSFVIAKRSG 60

Query: 59  -FGTTGM-FLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANK 116
             GT  M  L  R IHATG+C + +   YE+LGV ENASQDEIKKAFH+LAK+YHPDANK
Sbjct: 61  CLGTAEMQSLKCRYIHATGTCNAKEPSYYEILGVSENASQDEIKKAFHLLAKKYHPDANK 120

Query: 117 NNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG----------DAEGFR 166
           NNPSAKR FQEIR+AYETL+DSEKRAQYD R +R SE  +Y A           DA  FR
Sbjct: 121 NNPSAKRNFQEIREAYETLKDSEKRAQYDTRHARSSEKVEYGANFADWFGHGAEDAARFR 180

Query: 167 Y-AGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVS 225
           Y AG+ +GF Y+YQT+FSDSFHKIFSEIFED  +  A DIQVELVLSF EAA+GCTKH+S
Sbjct: 181 YGAGNGKGFSYSYQTNFSDSFHKIFSEIFED-ANQSASDIQVELVLSFTEAARGCTKHLS 239

Query: 226 FDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCK 285
           FDAFVPCDSC GRGFP DAKT++C  CRGIG++TIPPFTSTCS+CKG GRII+++CM+C+
Sbjct: 240 FDAFVPCDSCDGRGFPIDAKTRVCPACRGIGKITIPPFTSTCSSCKGSGRIIEEYCMSCR 299

Query: 286 GSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGA 345
           GSGVV+GVKEVKVT+PAG+DSGDTIRVPEAGNAGGRG Q GNLFI LKV DDP+F+RDG 
Sbjct: 300 GSGVVEGVKEVKVTVPAGIDSGDTIRVPEAGNAGGRGHQPGNLFISLKVEDDPVFTRDGV 359

Query: 346 DVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGD 405
           DVYVD+NISFTQAILGGKVDVPTLSGK Q+KIPKGVQPGQLLVLRGKGL K+G  +DHGD
Sbjct: 360 DVYVDANISFTQAILGGKVDVPTLSGKFQIKIPKGVQPGQLLVLRGKGLPKHGFLVDHGD 419

Query: 406 QYVRFRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWLYQQL 451
           Q+VRFR+NFPTA+NERQRAILEEFA EEINNEN TS E NW +Q L
Sbjct: 420 QFVRFRINFPTAINERQRAILEEFALEEINNENGTSNEGNW-WQHL 464

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142020|emb|CBI19223.3| unnamed protein product [Vitis vinifera]

 Score =  619 bits (1597), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 311/465 (66%), Positives = 371/465 (79%), Gaps = 30/465 (6%)

Query: 1   MSRFSWLRLSRRQLLSSTAVE-SPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADF 59
           M RF WL L +R L S++A++  PI   HC   A      ++H+R L+  + + G  +DF
Sbjct: 1   MGRFGWLGLCKRHLQSTSAIDFLPIE--HCRVPA------LIHQRILHGYNVLHGKPSDF 52

Query: 60  GTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP 119
            T G+  A R IHATG CYS++R+ YE+LGVP+NAS+DEIKKAFH+LAK++HPDANKNNP
Sbjct: 53  ATMGIPSATRYIHATGICYSTERNYYEILGVPQNASRDEIKKAFHVLAKKFHPDANKNNP 112

Query: 120 SAKRKFQEIRDAYETLRDSEKRAQYDR--RRSRGSENEKYSAGDAEGFRYAGDAEGFRYA 177
            AKRKFQEIRDAYETL+DSEKRAQYDR    S  SE+ K +AGD           GFRYA
Sbjct: 113 YAKRKFQEIRDAYETLQDSEKRAQYDRVPTLSHFSESVKDAAGD-----------GFRYA 161

Query: 178 YQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHG 237
           Y++HFSDSF KIF+EIFE ET +FA DIQVEL LSF+EAAKGCTKH+SFDA++PCDSC+G
Sbjct: 162 YRSHFSDSFRKIFAEIFEHETENFATDIQVELSLSFSEAAKGCTKHLSFDAYIPCDSCYG 221

Query: 238 RGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVK 297
           RG P DAKTK+C  C+GIGRVTIPPFTSTCS+CKGLGRI+K+HC TC+GSGVV+GVK+V+
Sbjct: 222 RGHPVDAKTKVCPICKGIGRVTIPPFTSTCSSCKGLGRIVKEHCTTCRGSGVVEGVKDVE 281

Query: 298 VTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLK--------VADDPIFSRDGADVYV 349
           V IPAGVDSGDTI VP+ GNAGGRG + GNL+IKLK        VA D  F RDGADVYV
Sbjct: 282 VVIPAGVDSGDTIHVPKVGNAGGRGVEPGNLYIKLKAQLYLFHSVAKDRTFVRDGADVYV 341

Query: 350 DSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVR 409
           +S+ISFTQAILGG V+VPTLSGK+Q+KIPKGVQPGQLLVLRGKGL K+GL +DHGDQYVR
Sbjct: 342 ESSISFTQAILGGTVEVPTLSGKMQLKIPKGVQPGQLLVLRGKGLPKHGLLVDHGDQYVR 401

Query: 410 FRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWLYQQLSTG 454
           FR+NFPTA+NERQRAILEEFA+EEI ++++TS E NW  Q    G
Sbjct: 402 FRINFPTAINERQRAILEEFAKEEIVHDSSTSGEGNWWQQIFERG 446

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459166|ref|XP_002283963.1| PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Vitis vinifera]

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 304/445 (68%), Positives = 365/445 (82%), Gaps = 20/445 (4%)

Query: 11  RRQLLSSTAVE-SPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARR 69
           +R L S++A++  PI   HC   A      ++H+R L+  + + G  +DF T G+  A R
Sbjct: 13  KRHLQSTSAIDFLPIE--HCRVPA------LIHQRILHGYNVLHGKPSDFATMGIPSATR 64

Query: 70  CIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIR 129
            IHATG CYS++R+ YE+LGVP+NAS+DEIKKAFH+LAK++HPDANKNNP AKRKFQEIR
Sbjct: 65  YIHATGICYSTERNYYEILGVPQNASRDEIKKAFHVLAKKFHPDANKNNPYAKRKFQEIR 124

Query: 130 DAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKI 189
           DAYETL+DSEKRAQYDR  +  SE+ K +AGD           GFRYAY++HFSDSF KI
Sbjct: 125 DAYETLQDSEKRAQYDRECTMSSESVKDAAGD-----------GFRYAYRSHFSDSFRKI 173

Query: 190 FSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKIC 249
           F+EIFE ET +FA DIQVEL LSF+EAAKGCTKH+SFDA++PCDSC+GRG P DAKTK+C
Sbjct: 174 FAEIFEHETENFATDIQVELSLSFSEAAKGCTKHLSFDAYIPCDSCYGRGHPVDAKTKVC 233

Query: 250 STCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309
             C+GIGRVTIPPFTSTCS+CKGLGRI+K+HC TC+GSGVV+GVK+V+V IPAGVDSGDT
Sbjct: 234 PICKGIGRVTIPPFTSTCSSCKGLGRIVKEHCTTCRGSGVVEGVKDVEVVIPAGVDSGDT 293

Query: 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL 369
           I VP+ GNAGGRG + GNL+IKLKVA D  F RDGADVYV+S+ISFTQAILGG V+VPTL
Sbjct: 294 IHVPKVGNAGGRGVEPGNLYIKLKVAKDRTFVRDGADVYVESSISFTQAILGGTVEVPTL 353

Query: 370 SGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEF 429
           SGK+Q+KIPKGVQPGQLLVLRGKGL K+GL +DHGDQYVRFR+NFPTA+NERQRAILEEF
Sbjct: 354 SGKMQLKIPKGVQPGQLLVLRGKGLPKHGLLVDHGDQYVRFRINFPTAINERQRAILEEF 413

Query: 430 AEEEINNENNTSAEENWLYQQLSTG 454
           A+EEI ++++TS E NW  Q    G
Sbjct: 414 AKEEIVHDSSTSGEGNWWQQIFERG 438

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515496|ref|XP_004164785.1| PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Cucumis sativus]

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 298/454 (65%), Positives = 348/454 (76%), Gaps = 10/454 (2%)

Query: 1   MSRFSWLRLSRRQLLSSTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFG 60
           M R  WL L RRQLLSS  V   I+    L K ++L Q     R L    S  G   DF 
Sbjct: 1   MKRLGWLGLCRRQLLSSEGVGPSIDLPLSLGKVSSLRQFFTCARALQAFPSAVGNGPDFA 60

Query: 61  TTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS 120
           T     +R  IH+TGSC S +RD YE+LGV  NAS++EIKKA+H LAK+YHPDANKNNPS
Sbjct: 61  TA-FPGSRHFIHSTGSCCSIERDYYEILGVQHNASREEIKKAYHALAKKYHPDANKNNPS 119

Query: 121 AKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQT 180
           AKRKFQEIR+AYETL+DSEKR+QYD+R    SEN  + AGDAEGF Y          Y+T
Sbjct: 120 AKRKFQEIREAYETLQDSEKRSQYDQRHGGESENVGFGAGDAEGFSYT---------YRT 170

Query: 181 HFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGF 240
           HFSDSF KIFSEIFE ET     DIQV+L+LSFAEAAKGCTK +SFDA VPCDSC+GRG+
Sbjct: 171 HFSDSFQKIFSEIFEHETGRLPSDIQVDLLLSFAEAAKGCTKDLSFDALVPCDSCYGRGY 230

Query: 241 PADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTI 300
           P +A  + C TCRG+GRVTIPPFTSTC+TC+G G+II++ C  C+G GVV+GV +V VTI
Sbjct: 231 PVNASKRSCPTCRGLGRVTIPPFTSTCTTCRGSGQIIEESCGQCRGMGVVEGVMKVTVTI 290

Query: 301 PAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAIL 360
           PAGVDSGDTIRVPEAGN+GGR    GNL IKLKVA+D +F RDG D+YVDSNISFTQAIL
Sbjct: 291 PAGVDSGDTIRVPEAGNSGGRDTHPGNLIIKLKVAEDHVFKRDGVDIYVDSNISFTQAIL 350

Query: 361 GGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNE 420
           GGKV+VPTLSG++Q+++PKGVQPGQLL LRGKGL K+G F+D GDQYVRFR+ FPT ++E
Sbjct: 351 GGKVEVPTLSGRMQIEVPKGVQPGQLLTLRGKGLPKHGFFVDRGDQYVRFRIKFPTEISE 410

Query: 421 RQRAILEEFAEEEINNENNTSAEENWLYQQLSTG 454
           RQRAILEEFAEEEI +    S E +WLYQQLSTG
Sbjct: 411 RQRAILEEFAEEEIKHGIGNSNEASWLYQQLSTG 444

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449470084|ref|XP_004152748.1| PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Cucumis sativus]

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 299/462 (64%), Positives = 351/462 (75%), Gaps = 10/462 (2%)

Query: 1   MSRFSWLRLSRRQLLSSTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFG 60
           M R  WL L RRQLLSS  V   I+    L K  +L Q     R L    S  G   DF 
Sbjct: 1   MKRLGWLGLCRRQLLSSEGVGPSIDLRLSLGKVPSLRQFFTCARALQAFPSAVGNGPDFA 60

Query: 61  TTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS 120
           T     +R  IH+TGSC S +RD YE+LGV  NAS++EIKKA+H LAK+YHPDANKNNPS
Sbjct: 61  TA-FPGSRHFIHSTGSCCSIERDYYEILGVQHNASREEIKKAYHALAKKYHPDANKNNPS 119

Query: 121 AKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS-------AGDAEGFRY-AGDAE 172
           AKRKFQEIR+AYETL+DSEKR+QYD+  +     EKY         G++E   + AGDAE
Sbjct: 120 AKRKFQEIREAYETLQDSEKRSQYDQV-AFPKLLEKYPIGFCCLHGGESENVGFGAGDAE 178

Query: 173 GFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232
           GF Y Y+THFSDSF KIFSEIFE ET     DIQV+L+LSFAEAAKGCTK +SFDA VPC
Sbjct: 179 GFSYTYRTHFSDSFQKIFSEIFEHETGRLPSDIQVDLLLSFAEAAKGCTKDLSFDALVPC 238

Query: 233 DSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292
           DSC+GRG+P +A  + C TCRG+GRVTIPPFTSTC+TC+G G+II++ C  C+G GVV+G
Sbjct: 239 DSCYGRGYPVNASKRSCPTCRGLGRVTIPPFTSTCTTCRGSGQIIEESCGQCRGMGVVEG 298

Query: 293 VKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSN 352
           V +V VTIPAGVDSGDTIRVPEAGN+GGR    GNL IKLKVA+D +F RDG D+YVDSN
Sbjct: 299 VMKVTVTIPAGVDSGDTIRVPEAGNSGGRDTHPGNLIIKLKVAEDHVFKRDGVDIYVDSN 358

Query: 353 ISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRV 412
           ISFTQAILGGKV+VPTLSG++Q+++PKGVQPGQLL LRGKGL K+G F+D GDQYVRFR+
Sbjct: 359 ISFTQAILGGKVEVPTLSGRMQIEVPKGVQPGQLLTLRGKGLPKHGFFVDRGDQYVRFRI 418

Query: 413 NFPTALNERQRAILEEFAEEEINNENNTSAEENWLYQQLSTG 454
            FPT ++ERQRAILEEFAEEEI +    S E +WLYQQLSTG
Sbjct: 419 KFPTEISERQRAILEEFAEEEIKHGIGNSNEASWLYQQLSTG 460

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498819|ref|XP_003518246.1| PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Glycine max]

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 302/455 (66%), Positives = 350/455 (76%), Gaps = 11/455 (2%)

Query: 1   MSRFSWLRLSRRQLLSSTAVESPINKSH-CLQKAATLPQSILHKRGLYYCSSVTGTLADF 59
           M RF+W    RR LLSS   ES ++K      K ++  QS L  R L  C  VT T  + 
Sbjct: 1   MRRFAWFTPYRRHLLSSLTSESLVDKGESTFTKFSSSRQSFLLARALVNCGFVTKT-EES 59

Query: 60  GTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP 119
               + L  R  HAT    S+ RD Y  LGVPENASQDEIKKAFH LAK+YHPDANKNNP
Sbjct: 60  RIPRVPLRYRYFHATAFSSSADRDHYGTLGVPENASQDEIKKAFHSLAKKYHPDANKNNP 119

Query: 120 SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQ 179
           SAKRKFQ+IR+AYETLRDS+KRA+YD+ R+RGSE+ +Y   DAE FR A         Y+
Sbjct: 120 SAKRKFQDIREAYETLRDSKKRAEYDKMRTRGSEDIEYDRDDAERFRNA---------YR 170

Query: 180 THFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRG 239
           +HFSDSFHK+F EIFE+ T+ F+ +I+VEL L+F+EAA+GCTKHVSFDA VPCD C+G+G
Sbjct: 171 SHFSDSFHKVFYEIFEEATTQFSSNIEVELSLTFSEAARGCTKHVSFDALVPCDHCNGQG 230

Query: 240 FPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT 299
           +P DA  K+C TCRG GRVTIPPFTSTC TCKG GRIIKD C+TC GSG V+GVKEVKVT
Sbjct: 231 YPLDAIPKVCPTCRGSGRVTIPPFTSTCITCKGSGRIIKDSCLTCGGSGAVEGVKEVKVT 290

Query: 300 IPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAI 359
           IPAGVDSGDTI VPE GNA G G + G+L+IK+KV +D IF RDGAD+YVDSNISFTQAI
Sbjct: 291 IPAGVDSGDTIHVPEGGNAAGSGGRPGSLYIKIKVTEDSIFVRDGADIYVDSNISFTQAI 350

Query: 360 LGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALN 419
           LGGKV+VPTLSGK+Q+KIPKGVQ GQLLVLRGKGL K+G  + HGDQYVRFRVN P  +N
Sbjct: 351 LGGKVEVPTLSGKMQLKIPKGVQHGQLLVLRGKGLPKHGFLVHHGDQYVRFRVNLPIEIN 410

Query: 420 ERQRAILEEFAEEEINNENNTSAEENWLYQQLSTG 454
           ERQRAILEE A+EEI   NN+S E NWLYQQLSTG
Sbjct: 411 ERQRAILEELAKEEIKEGNNSSFEGNWLYQQLSTG 445

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26451496|dbj|BAC42846.1| putative AtJ1 [Arabidopsis thaliana]

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 252/389 (64%), Positives = 308/389 (79%), Gaps = 11/389 (2%)

Query: 66  LARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKF 125
           L  R IHATG   SS R+ Y++LGV   A+++EIKK+FH LAK++HPD N+NNPSAKRKF
Sbjct: 31  LFERYIHATGINNSSARNYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNNPSAKRKF 90

Query: 126 QEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDS 185
           QEIR+AYETL +SE+R +YD+ + R S+   Y   D       GD+E FR AYQ++FSD+
Sbjct: 91  QEIREAYETLGNSERREEYDKLQYRNSD---YVNSDG------GDSERFRRAYQSNFSDT 141

Query: 186 FHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
           FHKIFSEIFE+  +   PDI+VEL LS +EAA+GCTK +SFDA+V CDSC G G P+DA 
Sbjct: 142 FHKIFSEIFEN--NQIKPDIRVELSLSLSEAAEGCTKRLSFDAYVFCDSCDGLGHPSDAA 199

Query: 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
             IC TCRG+GRVTIPPFT++C TCKG G IIK++CM+C+GSG+V+G K  ++ IP GV+
Sbjct: 200 MSICPTCRGVGRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEGTKTAELVIPGGVE 259

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           S  TI +  AGN   R  Q GNL+IKLKVA+D  F+RDG+D+YVD+NISFTQAILGGKV 
Sbjct: 260 SEATITIVGAGNVSSRTSQPGNLYIKLKVANDSTFTRDGSDIYVDANISFTQAILGGKVV 319

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAI 425
           VPTLSGK+Q+ IPKG QP QLLVLRGKGL K G F+DHGDQYVRFRVNFPT +NERQRAI
Sbjct: 320 VPTLSGKIQLDIPKGTQPDQLLVLRGKGLPKQGFFVDHGDQYVRFRVNFPTEVNERQRAI 379

Query: 426 LEEFAEEEINNENNTSAEENWLYQQLSTG 454
           LEEFA+EEINNE + SAE +WLYQ+LSTG
Sbjct: 380 LEEFAKEEINNELSDSAEGSWLYQKLSTG 408

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30690263|ref|NP_849719.1| chaperone protein dnaJ 1 [Arabidopsis thaliana] gi|66774115|sp|Q38813.2|DNAJ1_ARATH RecName: Full=Chaperone protein dnaJ 1, mitochondrial; Short=AtDjB1; Short=AtJ1; Flags: Precursor gi|332192810|gb|AEE30931.1| chaperone protein dnaJ 1 [Arabidopsis thaliana]

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 252/389 (64%), Positives = 308/389 (79%), Gaps = 11/389 (2%)

Query: 66  LARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKF 125
           L  R IHATG   SS R+ Y++LGV   A+++EIKK+FH LAK++HPD N+NNPSAKRKF
Sbjct: 31  LFERYIHATGINNSSARNYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNNPSAKRKF 90

Query: 126 QEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDS 185
           QEIR+AYETL +SE+R +YD+ + R S+   Y   D       GD+E FR AYQ++FSD+
Sbjct: 91  QEIREAYETLGNSERREEYDKLQYRNSD---YVNNDG------GDSERFRRAYQSNFSDT 141

Query: 186 FHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
           FHKIFSEIFE+  +   PDI+VEL LS +EAA+GCTK +SFDA+V CDSC G G P+DA 
Sbjct: 142 FHKIFSEIFEN--NQIKPDIRVELSLSLSEAAEGCTKRLSFDAYVFCDSCDGLGHPSDAA 199

Query: 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
             IC TCRG+GRVTIPPFT++C TCKG G IIK++CM+C+GSG+V+G K  ++ IP GV+
Sbjct: 200 MSICPTCRGVGRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEGTKTAELVIPGGVE 259

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           S  TI +  AGN   R  Q GNL+IKLKVA+D  F+RDG+D+YVD+NISFTQAILGGKV 
Sbjct: 260 SEATITIVGAGNVSSRTSQPGNLYIKLKVANDSTFTRDGSDIYVDANISFTQAILGGKVV 319

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAI 425
           VPTLSGK+Q+ IPKG QP QLLVLRGKGL K G F+DHGDQYVRFRVNFPT +NERQRAI
Sbjct: 320 VPTLSGKIQLDIPKGTQPDQLLVLRGKGLPKQGFFVDHGDQYVRFRVNFPTEVNERQRAI 379

Query: 426 LEEFAEEEINNENNTSAEENWLYQQLSTG 454
           LEEFA+EEINNE + SAE +WLYQ+LSTG
Sbjct: 380 LEEFAKEEINNELSDSAEGSWLYQKLSTG 408

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15217871|ref|NP_174142.1| chaperone protein dnaJ 1 [Arabidopsis thaliana] gi|9795616|gb|AAF98434.1|AC021044_13 Putative dnaJ protein [Arabidopsis thaliana] gi|332192811|gb|AEE30932.1| chaperone protein dnaJ 1 [Arabidopsis thaliana]

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/381 (64%), Positives = 300/381 (78%), Gaps = 11/381 (2%)

Query: 66  LARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKF 125
           L  R IHATG   SS R+ Y++LGV   A+++EIKK+FH LAK++HPD N+NNPSAKRKF
Sbjct: 31  LFERYIHATGINNSSARNYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNNPSAKRKF 90

Query: 126 QEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDS 185
           QEIR+AYETL +SE+R +YD+ + R S+   Y   D       GD+E FR AYQ++FSD+
Sbjct: 91  QEIREAYETLGNSERREEYDKLQYRNSD---YVNNDG------GDSERFRRAYQSNFSDT 141

Query: 186 FHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
           FHKIFSEIFE+  +   PDI+VEL LS +EAA+GCTK +SFDA+V CDSC G G P+DA 
Sbjct: 142 FHKIFSEIFEN--NQIKPDIRVELSLSLSEAAEGCTKRLSFDAYVFCDSCDGLGHPSDAA 199

Query: 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
             IC TCRG+GRVTIPPFT++C TCKG G IIK++CM+C+GSG+V+G K  ++ IP GV+
Sbjct: 200 MSICPTCRGVGRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEGTKTAELVIPGGVE 259

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           S  TI +  AGN   R  Q GNL+IKLKVA+D  F+RDG+D+YVD+NISFTQAILGGKV 
Sbjct: 260 SEATITIVGAGNVSSRTSQPGNLYIKLKVANDSTFTRDGSDIYVDANISFTQAILGGKVV 319

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAI 425
           VPTLSGK+Q+ IPKG QP QLLVLRGKGL K G F+DHGDQYVRFRVNFPT +NERQRAI
Sbjct: 320 VPTLSGKIQLDIPKGTQPDQLLVLRGKGLPKQGFFVDHGDQYVRFRVNFPTEVNERQRAI 379

Query: 426 LEEFAEEEINNENNTSAEENW 446
           LEEFA+EEINNE + SAE +W
Sbjct: 380 LEEFAKEEINNELSDSAEGSW 400

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845768|ref|XP_002890765.1| hypothetical protein ARALYDRAFT_473029 [Arabidopsis lyrata subsp. lyrata] gi|297336607|gb|EFH67024.1| hypothetical protein ARALYDRAFT_473029 [Arabidopsis lyrata subsp. lyrata]

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 244/381 (64%), Positives = 298/381 (78%), Gaps = 11/381 (2%)

Query: 66  LARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKF 125
           L  R IHATG   SS R+ Y++LGV   A+++EIKK+FH LAK++HPD N+NNPSAKRKF
Sbjct: 31  LFERYIHATGIYSSSARNYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNNPSAKRKF 90

Query: 126 QEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDS 185
           QEIR+AYETL +SE+R +YD+ R    +N  Y   D       GD E FR AYQ++FSDS
Sbjct: 91  QEIREAYETLGNSERREEYDKLRY---QNSDYVNNDG------GDGERFRRAYQSNFSDS 141

Query: 186 FHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
           FHKIFSEIFE+  +    DI+VEL LSF+EAA+GCTK +SFDA+V CDSC G G P DA 
Sbjct: 142 FHKIFSEIFEN--NQIKSDIRVELSLSFSEAAEGCTKRLSFDAYVFCDSCDGLGHPRDAA 199

Query: 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
             +C TCRG+GRVTIPPFT++C TCKG G IIK++CM+C+GSG+V+  K V++ IP GV+
Sbjct: 200 MSVCPTCRGLGRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEATKTVELAIPGGVE 259

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           S  TI +  AGN   R  Q GNL+IKLKVA+D  F+RDG+D+YVD+NISFTQAILGGKV 
Sbjct: 260 SEATITIGGAGNVRSRTSQPGNLYIKLKVANDSTFTRDGSDIYVDANISFTQAILGGKVV 319

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAI 425
           VPTLSGK+Q+ IP+G QPGQLLVLRGKGL K G F+DHGDQYVRFR+NFPT +NERQRAI
Sbjct: 320 VPTLSGKIQLDIPEGTQPGQLLVLRGKGLPKQGFFVDHGDQYVRFRINFPTEVNERQRAI 379

Query: 426 LEEFAEEEINNENNTSAEENW 446
           LEEFA+EEINNE + SAE +W
Sbjct: 380 LEEFAKEEINNELSGSAEGSW 400

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	454
TAIR|locus:2032175	427	ATJ1 [Arabidopsis thaliana (ta	0.770	0.819	0.639	1.3e-121
TAIR|locus:2162692	456	GFA2 "gametophytic factor 2" [	0.773	0.769	0.425	4.8e-71
TIGR_CMR|GSU_0034	373	GSU_0034 "chaperone protein dn	0.740	0.900	0.410	6e-64
DICTYBASE|DDB_G0278789	460	DDB_G0278789 "heat shock prote	0.768	0.758	0.369	1.8e-62
UNIPROTKB|P08622	376	dnaJ [Escherichia coli K-12 (t	0.731	0.882	0.388	1.5e-60
UNIPROTKB|O34242	381	dnaJ "Chaperone protein DnaJ"	0.737	0.879	0.392	8.1e-60
TIGR_CMR|VC_0856	381	VC_0856 "dnaJ protein" [Vibrio	0.737	0.879	0.392	8.1e-60
TIGR_CMR|SO_1127	378	SO_1127 "chaperone protein Dna	0.731	0.878	0.396	1.3e-59
TIGR_CMR|BA_4538	371	BA_4538 "chaperone protein dna	0.744	0.911	0.394	5.7e-59
ZFIN|ZDB-GENE-030131-7837	453	dnaja3a "DnaJ (Hsp40) homolog,	0.731	0.732	0.380	8.4e-58

TAIR|locus:2032175 ATJ1 [Arabidopsis thaliana (taxid:3702)]

 Score = 1196 (426.1 bits), Expect = 1.3e-121, P = 1.3e-121
 Identities = 231/361 (63%), Positives = 283/361 (78%)

Query:    66 LARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKF 125
             L  R IHATG   SS R+ Y++LGV   A+++EIKK+FH LAK++HPD N+NNPSAKRKF
Sbjct:    31 LFERYIHATGINNSSARNYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNNPSAKRKF 90

Query:   126 QEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDS 185
             QEIR+AYETL +SE+R +YD+ + R S+   Y   D       GD+E FR AYQ++FSD+
Sbjct:    91 QEIREAYETLGNSERREEYDKLQYRNSD---YVNNDG------GDSERFRRAYQSNFSDT 141

Query:   186 FHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
             FHKIFSEIFE+  +   PDI+VEL LS +EAA+GCTK +SFDA+V CDSC G G P+DA 
Sbjct:   142 FHKIFSEIFEN--NQIKPDIRVELSLSLSEAAEGCTKRLSFDAYVFCDSCDGLGHPSDAA 199

Query:   246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
               IC TCRG+GRVTIPPFT++C TCKG G IIK++CM+C+GSG+V+G K  ++ IP GV+
Sbjct:   200 MSICPTCRGVGRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEGTKTAELVIPGGVE 259

Query:   306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
             S  TI +  AGN   R  Q GNL+IKLKVA+D  F+RDG+D+YVD+NISFTQAILGGKV 
Sbjct:   260 SEATITIVGAGNVSSRTSQPGNLYIKLKVANDSTFTRDGSDIYVDANISFTQAILGGKVV 319

Query:   366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAI 425
             VPTLSGK+Q+ IPKG QP QLLVLRGKGL K G F+DHGDQYVRFRVNFPT +NERQRAI
Sbjct:   320 VPTLSGKIQLDIPKGTQPDQLLVLRGKGLPKQGFFVDHGDQYVRFRVNFPTEVNERQRAI 379

Query:   426 L 426
             L
Sbjct:   380 L 380

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;ISS

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2162692 GFA2 "gametophytic factor 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
 Identities = 158/371 (42%), Positives = 218/371 (58%)

Query:    65 FLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRK 124
             F + R  H TGS + S +D Y +LGV +NA + EIKKA++ LAK+ HPD NK++P A+ K
Sbjct:    76 FGSTRSFHGTGSSFMSAKDYYSVLGVSKNAQEGEIKKAYYGLAKKLHPDMNKDDPEAETK 135

Query:   125 FQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG--DAEGFRYAGDAEGFRYAYQTHF 182
             FQE+  AYE L+D EKR  YD+      E +  S G  + +GF   G   GF       F
Sbjct:   136 FQEVSKAYEILKDKEKRDLYDQVGHEAFE-QNASGGFPNDQGFG-GGGGGGFN-----PF 188

Query:   183 SDSFHKIFSEIFEDETSHFA-PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFP 241
              D F     +IF          D++V L LSF EA +GC+K V+F   + C++C G+G P
Sbjct:   189 -DIFGSFNGDIFNMYRQDIGGQDVKVLLDLSFMEAVQGCSKTVTFQTEMACNTCGGQGVP 247

Query:   242 ADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVK 297
                K + C  C G G  ++        +TC  C G G+     C +C+G+ VV G K VK
Sbjct:   248 PGTKREKCKACNGSGMTSLRRGMLSIQTTCQKCGGAGQTFSSICKSCRGARVVRGQKSVK 307

Query:   298 VTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQ 357
             VTI  GVD+ DT++V   G A   G Q G+L++ LKV +DP+F R+G+D++VD+ +S TQ
Sbjct:   308 VTIDPGVDNSDTLKVARVGGADPEGDQPGDLYVTLKVREDPVFRREGSDIHVDAVLSVTQ 367

Query:   358 AILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLA--KNGLFLDHGDQYVRFRVNFP 415
             AILGG + VPTL+G V VK+  G QPG  +VLR KG+   K+  F   GDQYV F V+ P
Sbjct:   368 AILGGTIQVPTLTGDVVVKVRPGTQPGHKVVLRNKGIRARKSTKF---GDQYVHFNVSIP 424

Query:   416 TALNERQRAIL 426
               + +RQR +L
Sbjct:   425 ANITQRQRELL 435

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0000740 "nuclear membrane fusion" evidence=IMP

GO:0010198 "synergid death" evidence=IMP

GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=IGI

GO:0000741 "karyogamy" evidence=RCA

GO:0009560 "embryo sac egg cell differentiation" evidence=RCA

GO:0009553 "embryo sac development" evidence=IMP

GO:0009558 "embryo sac cellularization" evidence=IMP

GO:0010197 "polar nucleus fusion" evidence=IMP

TIGR_CMR|GSU_0034 GSU_0034 "chaperone protein dnaJ" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 146/356 (41%), Positives = 205/356 (57%)

Query:    79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
             + KRD YE+LGV +NAS  EIKKAF  LA QYHPD N ++  A+ KF+EI +AYE L D 
Sbjct:     3 ADKRDYYEVLGVHKNASDTEIKKAFRKLAIQYHPDKNPDDKEAEEKFKEITEAYEVLSDP 62

Query:   139 EKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIF---- 194
             +KRAQYD+    G     +S G   GF  AG          T F D F  IF +IF    
Sbjct:    63 QKRAQYDQFGHAGVGAGGFSGGGFGGFG-AG----------TPFGDIFGDIFGDIFGGRP 111

Query:   195 EDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRG 254
                      D+Q  + LSF EAA G  K +       C  C G G     + K+C TCRG
Sbjct:   112 RGSRGRRGDDLQYNMELSFEEAAFGAEKEIQVPYGKRCGDCGGSGAKPGTEPKVCPTCRG 171

Query:   255 IGRVTIPP-FTS---TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310
              G+V     F S   TC+ C G GR++++ C +C+GSG++   K + V +PAGV++G  +
Sbjct:   172 AGQVRFQQGFFSVSKTCNHCNGEGRVVENPCTSCRGSGMIRDTKTLSVKVPAGVETGTRL 231

Query:   311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLS 370
             ++   G  G +G  +G+L++ + V + PIF+R+  DV  +  +SF QA LG +++VPTL 
Sbjct:   232 KLSGEGGQGIKGGGNGDLYVAIAVREHPIFTREDNDVLCEIPVSFVQAALGCEIEVPTLD 291

Query:   371 GKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAIL 426
             GKV +KIP+G Q G++  LRGKG+ +   +   GDQ V  +V  P+ LN+RQR +L
Sbjct:   292 GKVSMKIPEGTQSGRIFRLRGKGVPQLQGY-GRGDQLVIIKVETPSNLNKRQRELL 346

GO:0009408 "response to heat" evidence=ISS

DICTYBASE|DDB_G0278789 DDB_G0278789 "heat shock protein DnaJ family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 137/371 (36%), Positives = 207/371 (55%)

Query:    68 RRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQE 127
             +R   +T    S KRD YE+LGV  +AS+ +IKKAF+ LAK+YHPD N+++P+A + F E
Sbjct:    59 KRYFRSTSPILSEKRDLYEVLGVSRDASKQDIKKAFYALAKKYHPDTNRDDPNAHKTFAE 118

Query:   128 IRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFH 187
             I +AY+ L D +KR+ YD    +G+  E    G   GF   G   G     +  F   F 
Sbjct:   119 ISNAYDVLYDDKKRSVYDTAGHQGATQENMEHG---GF--PGGMGGQNVNLEDLFGGGFD 173

Query:   188 KIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGF 240
                +++F         + S    D++V L L F EA  G  K +SF     C  C G G 
Sbjct:   174 --LNDLFGGGGGGGGGKKSSVGADMEVNLHLDFMEAVNGAEKDISFYGGTKCTPCDGSGA 231

Query:   241 PADAKTKICSTCRGIGRVTIPP----FTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEV 296
                 K + C  C G G  T         + C  CKG G++IK+ C +CKG G+  G + V
Sbjct:   232 KPGTKPQTCKQCGGTGSQTRSNGFFHMATNCRACKGTGKVIKEPCSSCKGKGITQGERTV 291

Query:   297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFT 356
              + +PAG+++G TI++   G     GR+ GNLF+ + V++  +F R G D+++D  I+ +
Sbjct:   292 NIKVPAGINNGTTIKLAGEGEPSKTGRR-GNLFVHITVSEHELFRRQGNDIHLDVPITIS 350

Query:   357 QAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLA-KNGLFLDHGDQYVRFRVNFP 415
             QAILG  V +PTLSG+V++K+PKG QP +  VL+GKG+   N    + G Q+V F V+ P
Sbjct:   351 QAILGDTVSIPTLSGEVELKVPKGTQPNEKRVLKGKGVRFVNST--EFGSQFVHFIVSIP 408

Query:   416 TALNERQRAIL 426
               +N++Q+ ++
Sbjct:   409 KNINQKQQELI 419

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

UNIPROTKB|P08622 dnaJ [Escherichia coli K-12 (taxid:83333)]

 Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
 Identities = 138/355 (38%), Positives = 202/355 (56%)

Query:    80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             +K+D YE+LGV + A + EI+KA+  LA +YHPD N+ +  A+ KF+EI++AYE L DS+
Sbjct:     2 AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 61

Query:   140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
             KRA YD+    G  +  +  G   G  + G A+         FSD F  +F +IF     
Sbjct:    62 KRAAYDQY---G--HAAFEQGGMGGGGFGGGAD---------FSDIFGDVFGDIFGGGRG 107

Query:   197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
              + +    D++  + L+  EA +G TK +       CD CHG G     + + C TC G 
Sbjct:   108 RQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGS 167

Query:   256 GRVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
             G+V +    F    TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct:   168 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPAGVDTGDRIR 227

Query:   312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
             +   G AG  G   G+L+++++V   PIF R+G ++Y +  I+F  A LGG+++VPTL G
Sbjct:   228 LAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG 287

Query:   372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAIL 426
             +V++K+P   Q G+L  +RGKG+ K+      GD   R  V  P  LNERQ+ +L
Sbjct:   288 RVKLKVPGETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPVGLNERQKQLL 341

GO:0003756 "protein disulfide isomerase activity" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IDA;IMP

GO:0006457 "protein folding" evidence=IDA

GO:0042026 "protein refolding" evidence=IDA

GO:0051082 "unfolded protein binding" evidence=IEA;IDA

GO:0016020 "membrane" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0006260 "DNA replication" evidence=IEA;IMP

GO:0009408 "response to heat" evidence=IEA;IEP

GO:0046872 "metal ion binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0043335 "protein unfolding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|O34242 dnaJ "Chaperone protein DnaJ" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 140/357 (39%), Positives = 194/357 (54%)

Query:    80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             SKRD YE+LGV  +AS+ +IKKA+  LA +YHPD N  +  A  KF+E+++AYE L D++
Sbjct:     2 SKRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQ 61

Query:   140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
             K+A YD+      E     AG   GF   G   G        F D F  +F +IF     
Sbjct:    62 KKAAYDQYGHAAFEQ---GAG---GFGGGGFGGG-----GADFGDIFGDVFGDIFGGGRR 110

Query:   200 HFAP------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
                P      D++  + LS  EA +GC+K +     V CD+C G G       + C TC 
Sbjct:   111 GGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGTCH 170

Query:   254 GIGRVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309
             G G+V +    F    TC TC G G+IIKD C  C G G     K + V IPAGVD+GD 
Sbjct:   171 GHGQVQMRQGFFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAGVDTGDR 230

Query:   310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL 369
             IR+   G AG  G   G+L++++ V +  IF RDG ++Y +  +SF  A LGG+V+VPTL
Sbjct:   231 IRLSGEGEAGEMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVPTL 290

Query:   370 SGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAIL 426
              G+V +K+P   Q G++  +RGKG+ K       GD  V+  V  P  L+ RQ+ +L
Sbjct:   291 DGRVSLKVPAETQTGRMFRMRGKGV-KGVRSAALGDLIVKLVVETPVNLSARQKELL 346

GO:0006457 "protein folding" evidence=ISS

TIGR_CMR|VC_0856 VC_0856 "dnaJ protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 140/357 (39%), Positives = 194/357 (54%)

Query:    80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             SKRD YE+LGV  +AS+ +IKKA+  LA +YHPD N  +  A  KF+E+++AYE L D++
Sbjct:     2 SKRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQ 61

Query:   140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
             K+A YD+      E     AG   GF   G   G        F D F  +F +IF     
Sbjct:    62 KKAAYDQYGHAAFEQ---GAG---GFGGGGFGGG-----GADFGDIFGDVFGDIFGGGRR 110

Query:   200 HFAP------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
                P      D++  + LS  EA +GC+K +     V CD+C G G       + C TC 
Sbjct:   111 GGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGTCH 170

Query:   254 GIGRVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309
             G G+V +    F    TC TC G G+IIKD C  C G G     K + V IPAGVD+GD 
Sbjct:   171 GHGQVQMRQGFFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAGVDTGDR 230

Query:   310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL 369
             IR+   G AG  G   G+L++++ V +  IF RDG ++Y +  +SF  A LGG+V+VPTL
Sbjct:   231 IRLSGEGEAGEMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVPTL 290

Query:   370 SGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAIL 426
              G+V +K+P   Q G++  +RGKG+ K       GD  V+  V  P  L+ RQ+ +L
Sbjct:   291 DGRVSLKVPAETQTGRMFRMRGKGV-KGVRSAALGDLIVKLVVETPVNLSARQKELL 346

GO:0006457 "protein folding" evidence=ISS

TIGR_CMR|SO_1127 SO_1127 "chaperone protein DnaJ" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 142/358 (39%), Positives = 198/358 (55%)

Query:    80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             SKRD YE+LGV  +AS+ EIKKA+  LA ++HPD N  + +A+  F+E+++AYE L D+ 
Sbjct:     2 SKRDYYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEVKEAYEILTDAN 61

Query:   140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFE---- 195
             K+A YD+    G +  +   G   G+  AGD           F D F  +F +IF     
Sbjct:    62 KKAAYDQFGHAGVDPNRGGGG---GYGGAGD-----------FGDIFGDVFGDIFGGGRR 107

Query:   196 ---DETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC 252
                   +    D++  L LS  EA KG TK +       CD C G G         C+TC
Sbjct:   108 GGGQRQAARGSDLRYNLELSLEEAVKGLTKELRIPTLASCDVCDGSGAKKGTSATTCTTC 167

Query:   253 RGIGRVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308
              G G+V +    FT    C TC G G+IIKD C  C G G V+  K + V IPAGVD+GD
Sbjct:   168 HGQGQVQMRQGFFTVQQPCPTCHGRGKIIKDPCAKCHGDGRVEKTKTLSVKIPAGVDTGD 227

Query:   309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPT 368
              IR+   G AG  G   G+L++++ V +  IF RDG ++Y +  ISF++A LGG+++VPT
Sbjct:   228 RIRLAGEGEAGEFGAPAGDLYVQVSVREHAIFVRDGNNLYCEVPISFSKAALGGEIEVPT 287

Query:   369 LSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAIL 426
             L GKV +KIP   Q G++  LRGKG+ K+      GD   +  +  P  LNERQ+ +L
Sbjct:   288 LDGKVSLKIPAETQTGRMFRLRGKGV-KSVRSHAVGDLLCKVVMETPVNLNERQKELL 344

GO:0009408 "response to heat" evidence=ISS

TIGR_CMR|BA_4538 BA_4538 "chaperone protein dnaJ" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 140/355 (39%), Positives = 194/355 (54%)

Query:    80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             SKRD YE+LG+ + AS+DEIKKA+  LAK+YHPD +K   +A  KF+E+++AYE L D +
Sbjct:     2 SKRDYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEE-NAIEKFKEVQEAYEVLSDDQ 60

Query:   140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
             KRAQYD+    G+ N+ +      GF   GD  G  + ++  FS  F        +    
Sbjct:    61 KRAQYDQFGHAGA-NQGFG-----GFGGGGDFGG-GFGFEDIFSSFFGGGGGRRRDPNAP 113

Query:   200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVT 259
                 D+Q ++ L F EA  G   +V      PCD+C G G       + C  C G G+V+
Sbjct:   114 RQGADLQYQVTLEFEEAIFGKELNVEIPVEDPCDTCKGSGAKPGTSKETCKHCSGSGQVS 173

Query:   260 IP---PF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
             +    PF        CS C G G++IK+ C TC GSG V   K++ V IPAG+D+G  IR
Sbjct:   174 VEQNTPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSGKVRKRKKINVKIPAGIDNGQQIR 233

Query:   312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
             V   G AG  G   G+L++ + V     F R+G  +  +  ++F Q  LG +V+VPT+ G
Sbjct:   234 VSGKGEAGVNGGPAGDLYVVVHVRSHEFFEREGDHIICEMPLTFAQMALGAEVEVPTVHG 293

Query:   372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAIL 426
             KV++KIP G Q G    L+GKG A N      GDQYV  RV  PT L   Q+ +L
Sbjct:   294 KVKLKIPAGTQTGTEFRLKGKG-APNVRGYGQGDQYVVVRVVVPTKLTSHQKDLL 347

GO:0009408 "response to heat" evidence=ISS

ZFIN|ZDB-GENE-030131-7837 dnaja3a "DnaJ (Hsp40) homolog, subfamily A, member 3A" [Danio rerio (taxid:7955)]

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 137/360 (38%), Positives = 192/360 (53%)

Query:    76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETL 135
             S  S K+D Y++LGVP +A+Q EIKKA++ +AK+YHPD NK +P AK KF ++ +AYE L
Sbjct:    84 SAPSRKQDFYQILGVPRSATQKEIKKAYYQMAKKYHPDTNKEDPQAKEKFAQLAEAYEVL 143

Query:   136 RDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI-- 193
              D  KR QYD   S G +  +  AG  +   Y G              + F KIF E   
Sbjct:   144 SDEVKRKQYDTYGSAGFDAGRAGAGHQQ---YWGGGTSIDP------EELFRKIFGEFSG 194

Query:   194 ---FEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICS 250
                F D  + F    +  + L+FA+AAKG  K ++ +    C  C GRG    +K + C 
Sbjct:   195 AQGFGDFNAIFNQPQEYVMELTFAQAAKGVNKEITVNIEGTCQRCDGRGHEPGSKVQHCG 254

Query:   251 TCRGIGRVTIP--PFT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306
              C G G  T+   PF   STC  C G G +I   C+ C+G+G     K V V +PAG++ 
Sbjct:   255 NCNGTGMETVNTGPFVMRSTCRRCGGRGSVITSPCIACRGTGQTKQRKTVTVPVPAGIED 314

Query:   307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDV 366
             G T+R+P        G++   +FI  KV   PIF RDGAD++ D  IS  QAILGG +  
Sbjct:   315 GQTVRMPV-------GKKE--IFITFKVQKSPIFRRDGADIHSDVMISVAQAILGGTIRA 365

Query:   367 PTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAIL 426
               L   + + IP G Q  Q + L GKG+ +   +  +GD YV  ++  P  L +RQRA++
Sbjct:   366 QGLYETINLSIPVGTQTDQRIRLSGKGIPRVSGY-GYGDHYVHIKIKIPKMLTDRQRALM 424

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q38813	DNAJ1_ARATH	No assigned EC number	0.6478	0.8325	0.9264	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00015152001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (411 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00033682001	SubName- Full=Chromosome chr8 scaffold_68, whole genome shotgun sequence;; Essential component [...] (313 aa)	•		•						0.591
	GSVIVG00015306001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence;; Essential component [...] (298 aa)	•		•						0.579
	GSVIVG00005738001	SubName- Full=Chromosome chr3 scaffold_157, whole genome shotgun sequence; (626 aa)	•		•						0.509
	GSVIVG00012517001	SubName- Full=Chromosome undetermined scaffold_388, whole genome shotgun sequence; Flags- Fragm [...] (372 aa)			•						0.492
	GSVIVG00004141001	SubName- Full=Chromosome undetermined scaffold_611, whole genome shotgun sequence; (468 aa)			•						0.492
	GSVIVG00017724001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (538 aa)			•						0.489
	GSVIVG00017185001	SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (482 aa)			•						0.489
	GSVIVG00022013001	SubName- Full=Chromosome chr18 scaffold_24, whole genome shotgun sequence; (667 aa)	•		•						0.488
	GSVIVG00001482001	SubName- Full=Chromosome chr3 scaffold_117, whole genome shotgun sequence; (103 aa)			•						0.487
	GSVIVG00018506001	SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (649 aa)			•						0.486

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	454
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	1e-122
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	1e-121
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	1e-117
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	2e-98
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	2e-96
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	7e-92
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	4e-91
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	1e-87
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	1e-87
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	4e-82
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	2e-80
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	1e-79
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	8e-76
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	2e-75
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	2e-75
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	3e-75
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	5e-75
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	4e-73
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	2e-72
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	4e-72
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	5e-71
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	1e-68
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	1e-66
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	2e-66
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	3e-64
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	2e-63
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	1e-58
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	7e-53
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	5e-51
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	3e-41
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	2e-37
pfam00226	63	pfam00226, DnaJ, DnaJ domain	2e-29
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	2e-26
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	2e-23
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	2e-23
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	4e-23
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	2e-22
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	1e-18
cd10719	65	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and H	1e-17
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	2e-17
pfam00684	65	pfam00684, DnaJ_CXXCXGXG, DnaJ central domain	1e-13
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	8e-09
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	2e-08
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	1e-06
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	2e-06
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	1e-05
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	1e-05
TIGR00714	155	TIGR00714, hscB, Fe-S protein assembly co-chaperon	2e-05
PRK01356	166	PRK01356, hscB, co-chaperone HscB; Provisional	2e-05
PRK03578	176	PRK03578, hscB, co-chaperone HscB; Provisional	1e-04
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	0.001
PRK05014	171	PRK05014, hscB, co-chaperone HscB; Provisional	0.001
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	0.002
PLN03165	111	PLN03165, PLN03165, chaperone protein dnaJ-related	0.002

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  360 bits (925), Expect = e-122
 Identities = 153/383 (39%), Positives = 201/383 (52%), Gaps = 38/383 (9%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV ++AS++EIKKA+  LAK+YHPD N  +  A+ KF+EI +AYE L D E
Sbjct: 2   AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPE 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
           KRA YD+    G    K       GF                F   F  IF + F     
Sbjct: 62  KRAAYDQF---GHAGFKAGGFGGFGF--------------GGFGGDFGDIFEDFFGGGGG 104

Query: 200 HFAP--------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICST 251
                       D++  L ++  EA  G  K +     V C +CHG G       K C T
Sbjct: 105 GRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPT 164

Query: 252 CRGIGRVTI---PPFTS---TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
           C G G+V       F S   TC TC G G+IIKD C  CKG G V   K + V IPAGVD
Sbjct: 165 CNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVD 224

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
            GD IR+   G AG  G   G+L++ + V   PIF RDG D+Y +  ISFT+A LGG+++
Sbjct: 225 DGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIE 284

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFPTALNERQ 422
           VPTL G+V++KIP G Q G++  LRGKG+ K    G     GD YVR +V  P  L++ Q
Sbjct: 285 VPTLDGRVKLKIPAGTQTGEVFRLRGKGMPKLRSGG----RGDLYVRVKVETPKNLSDEQ 340

Query: 423 RAILEEFAEEEINNENNTSAEEN 445
           + +LEEFA+        +    +
Sbjct: 341 KELLEEFAKSLGEGPEQSPGFFD 363

Length = 371

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score =  358 bits (920), Expect = e-121
 Identities = 153/371 (41%), Positives = 202/371 (54%), Gaps = 37/371 (9%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           D YE+LGV ++AS++EIKKA+  LAK+YHPD NK+   A+ KF+EI +AYE L D EKRA
Sbjct: 1   DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD-KEAEEKFKEINEAYEVLSDPEKRA 59

Query: 143 QYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED------ 196
           QYD+    G            G    G   GF       F   F  IF + F        
Sbjct: 60  QYDQFGHAGFNGG--------GGGGGGGFNGF----DIGFFGDFGDIFGDFFGGGGGSGR 107

Query: 197 ---ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
                     D++ +L L+F EA  G  K +       C++CHG G       K C TC 
Sbjct: 108 RRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCG 167

Query: 254 GIGRVTI---PPF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
           G G+V      PF       TC TC G G+IIK+ C TCKG G V   K + V IPAGVD
Sbjct: 168 GTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVD 227

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           +G  +RV   GNAG  G  +G+L++ ++V    IF RDG D+Y++  ISFTQAILGG+++
Sbjct: 228 TGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIE 287

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFPTALNERQ 422
           VPTL G V++KIP G Q G +  L+GKG+ +   NG     GD  V  +V  P  L++ Q
Sbjct: 288 VPTLDGDVKLKIPAGTQSGTVFRLKGKGVPRLRGNG----RGDLLVTVKVETPKNLSKEQ 343

Query: 423 RAILEEFAEEE 433
           + +LEE AE  
Sbjct: 344 KELLEELAEAS 354

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score =  348 bits (895), Expect = e-117
 Identities = 159/380 (41%), Positives = 215/380 (56%), Gaps = 30/380 (7%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV  NAS+DEIKKA+  LA +YHPD N  +  A+ KF+EI++AYE L D +
Sbjct: 2   AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
           KRA YD+          Y  G A  F   G   GF       F D F  IF +IF     
Sbjct: 62  KRAAYDQ----------Y--GHA-AFEQGGGGGGF--GGGGGFGDIFGDIFGDIFGGGRG 106

Query: 200 HFAP------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
                     D++  + ++  EA +G TK +     V CD+CHG G       K C TC 
Sbjct: 107 GGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCH 166

Query: 254 GIGRVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309
           G G+V +    FT   TC TC G G+IIKD C  C G G V+  K + V IPAGVD+GD 
Sbjct: 167 GAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDR 226

Query: 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL 369
           IR+   G AG RG   G+L++++ V + PIF RDG D+Y +  ISFT A LGG+++VPTL
Sbjct: 227 IRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTL 286

Query: 370 SGKVQVKIPKGVQPGQLLVLRGKGLA--KNGLFLDHGDQYVRFRVNFPTALNERQRAILE 427
            G+V++KIP+G Q G+L  LRGKG+   ++G     GD Y +  V  P  L +RQ+ +LE
Sbjct: 287 DGRVKLKIPEGTQTGKLFRLRGKGVKSVRSG---ARGDLYCQVVVETPVNLTKRQKELLE 343

Query: 428 EFAEEEINNENNTSAEENWL 447
           EF E   + E ++   + + 
Sbjct: 344 EFEESFESGEKHSPKSKGFF 363

Length = 371

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score =  299 bits (768), Expect = 2e-98
 Identities = 145/368 (39%), Positives = 200/368 (54%), Gaps = 24/368 (6%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           K+D YE+LGV  NA+++EIKKA+  LAK+YHPD N  +  A++KF+EI +AYE L D +K
Sbjct: 4   KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQK 63

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS- 199
           RAQYD+      +   +  G   GF   G   G        F D F  IF + F      
Sbjct: 64  RAQYDQFGHAAFDPGGFGQG---GFGQGGFGGGGFDFDFGGFGDIFEDIFGDFFGTGRRR 120

Query: 200 -HFAP----DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRG 254
               P    DI+ +L L+F EAA G  K +  + F  CD C G G    +K   C  C G
Sbjct: 121 AETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHG 180

Query: 255 IGRVTI---PPF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306
            G+V      PF       TC  C G G+II D C  C G+G +   +++KV IPAG+D 
Sbjct: 181 TGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDD 240

Query: 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDV 366
           G  I +   G  G +G  +G+L+I +KV   P+F R+G +VY++  I+FT A LGG++++
Sbjct: 241 GQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEI 300

Query: 367 PTLSGKVQVKIPKGVQPGQLLVLRGKG---LAKNGLFLDHGDQYVRFRVNFPTALNERQR 423
           PTL GKV+  IP+G Q G    LRGKG   L   G     GDQ V+  +  P  L E+Q+
Sbjct: 301 PTLDGKVKFTIPEGTQTGTKFRLRGKGIPHLRGRG----RGDQIVKVYIEVPKKLTEKQK 356

Query: 424 AILEEFAE 431
            +L EF +
Sbjct: 357 ELLREFEK 364

Length = 386

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score =  294 bits (754), Expect = 2e-96
 Identities = 151/367 (41%), Positives = 197/367 (53%), Gaps = 31/367 (8%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV ++AS+DEIKKA+  L+K+YHPD NK    A  KF+EI +AYE L D +
Sbjct: 2   AKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE-EGADEKFKEISEAYEVLSDDQ 60

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
           KRAQYD+    G  N+ +  G   G  + G   GF           F  IFS  F     
Sbjct: 61  KRAQYDQFGHAGP-NQGFGGGGFGGGDFGG---GF----------GFEDIFSSFFGGGGR 106

Query: 200 HFAP-------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC 252
              P       D+Q  + L+F EA  G  K +       CD+CHG G       + CS C
Sbjct: 107 RRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHC 166

Query: 253 RGIGRVTIPPFT--------STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304
            G G+V++   T         TC  C G G+ IK+ C TC G G V   K++ V IPAGV
Sbjct: 167 GGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGV 226

Query: 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKV 364
           D+G  IRV   G  G  G   G+L++  +V     F RDG D+Y +  ++F QA LG ++
Sbjct: 227 DNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEI 286

Query: 365 DVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRA 424
           +VPTL GKV++KIP G Q G    L+GKG   N      GDQYV  RV  PT L +RQ+ 
Sbjct: 287 EVPTLHGKVKLKIPAGTQTGTQFRLKGKG-VPNVRGYGQGDQYVVVRVVTPTKLTDRQKE 345

Query: 425 ILEEFAE 431
           +L EFAE
Sbjct: 346 LLREFAE 352

Length = 376

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score =  283 bits (725), Expect = 7e-92
 Identities = 142/369 (38%), Positives = 195/369 (52%), Gaps = 34/369 (9%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
             + Y+ LGV ++ASQDEIKKA+  L+K+YHPD NK  P A+ K++E+++AYETL D +K
Sbjct: 3   NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE-PGAEEKYKEVQEAYETLSDPQK 61

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSH 200
           RA YD+  + G+ N  +  G A GF     + GF           F  IFS  F    + 
Sbjct: 62  RAAYDQYGAAGA-NGGF-GGGAGGFGGFDGSGGF---------GGFEDIFSSFFGGGGAR 110

Query: 201 FAP-------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
             P       D+Q  + L F EA  G  K VS++    C +C+G G         C  C 
Sbjct: 111 RNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCH 170

Query: 254 GIGRVTIPPFT--------STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
           G G +T+   T         TC  C G G+ IK+ C TC G+G       V V IPAGV+
Sbjct: 171 GSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVE 230

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           +G  IR+   G AG  G  +G+L++  +V     F RDG+ +Y    ISF QA LG  V+
Sbjct: 231 TGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVE 290

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFPTALNERQ 422
           VPT+ G V++KIP G Q G+   LRGKG  K    G    +GDQ+V   +  PT LN+ Q
Sbjct: 291 VPTVHGDVELKIPAGTQTGKKFRLRGKGAPKLRGGG----NGDQHVTVNIVTPTKLNDAQ 346

Query: 423 RAILEEFAE 431
           +  L+ FA+
Sbjct: 347 KEALKAFAK 355

Length = 380

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score =  280 bits (719), Expect = 4e-91
 Identities = 153/364 (42%), Positives = 194/364 (53%), Gaps = 24/364 (6%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S+RD YE+LGV  +AS+DEIKKA+  LA QYHPD N +NP A++KF+E  +AYE LRD+E
Sbjct: 2   SQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAE 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
           KRA+YDR    G        G   GF  A D          HFSD F  +F   F    S
Sbjct: 62  KRARYDRFGHAGVNGN----GGFGGFSSAEDIFS-------HFSDIFGDLFG--FSGGGS 108

Query: 200 HFAP------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
              P      D++  L +SF +AAKG    +     V CD C G G       + C  C 
Sbjct: 109 RRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCG 168

Query: 254 GIGRVTIPP----FTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309
           G G+V            C  C+G GR+I   C  CKGSG+V   +E+KV IPAGVD+G  
Sbjct: 169 GSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSR 228

Query: 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL 369
           +R+   G  G  G   G+L++ + V DD IF R G D+ V   ISF QA LG +++VPTL
Sbjct: 229 LRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTL 288

Query: 370 SGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEF 429
              V + IPKG Q G++  LRGKGL   G     GD  V   V  PT L +RQ  +L EF
Sbjct: 289 DDPVTLDIPKGTQSGEVFRLRGKGLPYLG-SSQKGDLLVEVSVVTPTKLTKRQEELLREF 347

Query: 430 AEEE 433
              E
Sbjct: 348 EALE 351

Length = 373

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score =  272 bits (697), Expect = 1e-87
 Identities = 137/367 (37%), Positives = 192/367 (52%), Gaps = 33/367 (8%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
            D YE+LGV  +A +DE+K+A+  LA++YHPD NK  P A+ +F+EI  AYE L D E R
Sbjct: 3   ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE-PGAEDRFKEINRAYEVLSDPETR 61

Query: 142 AQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHF 201
           A+YD+    G          A GF   GD  GF        +D F   FS          
Sbjct: 62  ARYDQFGEAG-------VSGAAGFPDMGDMGGF--------ADIFETFFSGFGGAGGQGG 106

Query: 202 AP---------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC 252
                      D++ +L L F EA  G  K +       C++C G G         CSTC
Sbjct: 107 RRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTC 166

Query: 253 RGIG---RVTIPPF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304
            G G   R T  PF      S C TC G G++I+D C  C G GV    K++K+ IPAGV
Sbjct: 167 GGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGV 226

Query: 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKV 364
           D+G  +RV   G+AG RG   G+L++ L V +DP F RDG ++  +  IS+ QAILG  +
Sbjct: 227 DTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTL 286

Query: 365 DVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRA 424
           +V T+ G V++ IP G QP  +L L  KG+ + G  +  GD  +  +V  PT +++ +R 
Sbjct: 287 EVDTVDGPVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERE 346

Query: 425 ILEEFAE 431
           +LE+ A+
Sbjct: 347 LLEKLAK 353

Length = 374

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score =  272 bits (696), Expect = 1e-87
 Identities = 135/368 (36%), Positives = 196/368 (53%), Gaps = 28/368 (7%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           + +D YE+LG+ + AS DEIKKAF  LA +YHPD NK N  A+ KF+EI +AY+ L D +
Sbjct: 2   ASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDA--EGFRYAYQTHFSDSFHKIFSEIFEDE 197
           K+AQYD+          +   D  G    G     GF ++    F D F   F   F   
Sbjct: 62  KKAQYDQ----------FGTADFNGAGGFGSGGFGGFDFSDMGGFGDIFDSFFGGGFGSS 111

Query: 198 TS-----HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC 252
           +          DI+  + L+F EA  G  K +S      C++C+G G       K C  C
Sbjct: 112 SRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKC 171

Query: 253 RGIGRVTI---PPF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304
            G G++ +    P      T+TC  C G G++I+D C  C G G V   +++KV +PAGV
Sbjct: 172 GGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGV 231

Query: 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKV 364
           D+G+ I +   G  G  G   G+L+I ++VA    F R G D+Y+D +ISF +A LG ++
Sbjct: 232 DTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEI 291

Query: 365 DVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK-NGLFLDHGDQYVRFRVNFPTALNERQR 423
            VPT+ G+V+ ++P G QPG +  L+GKG+ + N      G+QYV   V+ P  LN +Q+
Sbjct: 292 KVPTVDGEVKYEVPAGTQPGTVFRLKGKGVPRVNS--TGRGNQYVTVIVDIPKKLNSKQK 349

Query: 424 AILEEFAE 431
             L  F E
Sbjct: 350 EALTMFME 357

Length = 380

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score =  258 bits (660), Expect = 4e-82
 Identities = 129/360 (35%), Positives = 193/360 (53%), Gaps = 39/360 (10%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D YE+LGV  NA+Q+EIKKA+  LA++YHPD NKN P A+ KF+EI +AY+ L D E
Sbjct: 1   AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPE 59

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKI-----FSEIF 194
           KR  YD+          +S    +        EGF      +  D    +     F +IF
Sbjct: 60  KRKLYDQFGHAA-----FSGSGQQQQ----GQEGFSDFGGGNIEDILEDVFDIFGFGDIF 110

Query: 195 EDETS-------HFAP----DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPAD 243
               +       +  P    DI   + +S  EA  G T  +    +VPC++C G G+   
Sbjct: 111 GRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPG 170

Query: 244 AKTKICSTCRGIGRVTIPPF----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT 299
           +  K+C TC G G +         + TC TC G G ++++ C  C G G+V   + +KV 
Sbjct: 171 SGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEG-VLREPCSKCNGRGLVIKKETIKVR 229

Query: 300 IPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAI 359
           IP GVD+G  +RVP  G+AG  G   G+L+I +KV   P+F R G ++Y+D NI+  +A+
Sbjct: 230 IPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAV 289

Query: 360 LGGKVDVPTLSG-KVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFP 415
           LG +++VP L G K +VKIP G + G  + + GKG+ +   +G    +GD  VR  ++ P
Sbjct: 290 LGTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLKGSG----YGDLVVRVHIDVP 345

Length = 382

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score =  252 bits (646), Expect = 2e-80
 Identities = 144/385 (37%), Positives = 195/385 (50%), Gaps = 38/385 (9%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
             KRD YE+LGV  +AS++EIKK++  LA +YHPD N  +  A+  F+E  +AYE L D 
Sbjct: 1   MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDP 60

Query: 139 EKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDET 198
           +KR  YD+    G     +S     GF    D           FS SF  IF + F    
Sbjct: 61  KKRGIYDQYGHEGLSGTGFS-----GFSGFDDI----------FS-SFGDIFEDFFGFGG 104

Query: 199 -----SHFAP----DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKIC 249
                S  A     D++ +L L F EAA G  K +       C+ CHG G         C
Sbjct: 105 GRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTC 164

Query: 250 STCRGIGRVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
             C G G+VT     F+  +TC  C+G+G++I   C TC G G V   K V+V IPAGVD
Sbjct: 165 PQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVD 224

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           +G  +R+   G AG RG   G+L++ L V     F RDG DV+    ISF QA LG +++
Sbjct: 225 TGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIE 284

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFPTALNERQ 422
           VPTL G+ ++KIPKG QPG +   +GKG+      G     GDQ +   V  PT L ++Q
Sbjct: 285 VPTLEGERELKIPKGTQPGDIFRFKGKGIPSLRGGG----RGDQIIEVEVKVPTRLTKKQ 340

Query: 423 RAILEEFAEEEINNENNTSAEENWL 447
             +L EFA   + +E   +   N  
Sbjct: 341 EELLTEFA--RLESEKIGNKLRNLF 363

Length = 366

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score =  251 bits (642), Expect = 1e-79
 Identities = 145/378 (38%), Positives = 202/378 (53%), Gaps = 31/378 (8%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
           ++ RD YE+LG+ ++AS ++IKKA+  LA +YHPD NK  P A+ KF+EI +AY  L D+
Sbjct: 2   ATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE-PDAEEKFKEISEAYAVLSDA 60

Query: 139 EKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDET 198
           EKRAQYDR    G +N +YSA D            FR A    F D F   F        
Sbjct: 61  EKRAQYDRFGHAGIDN-QYSAEDI-----------FRGADFGGFGDIFEMFFGG--GGRR 106

Query: 199 SHFAP----DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRG 254
               P    D++ +L ++  EAA G  K +       C +C G G       K C TC G
Sbjct: 107 GRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGG 166

Query: 255 IGRVT------IPPF--TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306
            G+VT      +  F  T+TCSTC G G++I+  C  C G+G V   +++ V +PAG DS
Sbjct: 167 TGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADS 226

Query: 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDV 366
           G  +++   G AG  G   G+L+I L V +   F R G D+  +  ISFTQA LG  + V
Sbjct: 227 GLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMV 286

Query: 367 PTLSGKVQVKIPKGVQPGQLLVLRGKGLAK-NGLFLDHGDQYVRFRVNFPTALNERQRAI 425
           PTL GKV++ IP G Q   +  L+ KG+ + +G     GDQ V+  V  PT L + Q+ +
Sbjct: 287 PTLYGKVKMNIPPGTQTHSVFRLKDKGMPRLHG--HGKGDQLVKVIVKTPTKLTQEQKEL 344

Query: 426 LEEFAEEEINNENNTSAE 443
           L EF +E  N +N + A 
Sbjct: 345 LREF-DELSNGKNPSKAG 361

Length = 377

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score =  241 bits (617), Expect = 8e-76
 Identities = 142/395 (35%), Positives = 196/395 (49%), Gaps = 50/395 (12%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
           + KRD YE+LGV + A+ DEIKKA+   A QYHPD N  +  A+ KF+E  +AY+ L D 
Sbjct: 2   AEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDP 61

Query: 139 EKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFS---EIFE 195
           +KR++YD+    G        G A G  ++G  EG           S   IFS   +IF 
Sbjct: 62  DKRSRYDQFGHAGV------GGAAGGGGFSG--EGM----------SMEDIFSMFGDIFG 103

Query: 196 DETSHFA-----------------PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGR 238
                F                   D++V++ L+  E + G  K      +VPC  CHG 
Sbjct: 104 GHGGGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGT 163

Query: 239 GFPADAKTKICSTCRGIGRVTIPPFT--------STCSTCKGLGRIIKDHCMTCKGSGVV 290
           G   +  ++ C TC+G G VT    T        STC TC G G+IIK  C  C G G+V
Sbjct: 164 GAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIV 223

Query: 291 DGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD 350
            G + + V IPAGV  G  + +   GNAG  G  +G+L + ++    P   RD  D+  +
Sbjct: 224 YGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYN 283

Query: 351 SNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK-NGLFLDHGDQYVR 409
             +S   A LGG V+VPT+ GK +VKI  G QPG++L LR KGL   NG     GD  V 
Sbjct: 284 LLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGKVLRLRNKGLPSVNG--YGTGDLLVN 341

Query: 410 FRVNFPTALNERQRAILEEFAEEEINNENNTSAEE 444
             V  P  L++ ++  LE+  E   N +  TS +E
Sbjct: 342 VSVYIPETLSKEEKQTLEKM-ENSDNFKPTTSIKE 375

Length = 386

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score =  240 bits (614), Expect = 2e-75
 Identities = 128/371 (34%), Positives = 189/371 (50%), Gaps = 29/371 (7%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDAN-KNNPSAKRKFQEIRDAYETLRDSE 139
           K+D YE+LGV  NA+Q+EIK+A+  L K++HPD + +N   A++KF+EI++AYE L D +
Sbjct: 3   KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQ 62

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHK-IFSEIFED-- 196
           KRA YDR          Y  G+   ++      GF       F + F++ IF   F +  
Sbjct: 63  KRAMYDRF--------GY-VGEQPPYQETESGGGFFEDIFKDFENIFNRDIFDIFFGERR 113

Query: 197 ------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICS 250
                 E +    DI+ E+ ++ ++   G    V +D +  C  C G G    +    C 
Sbjct: 114 TQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCP 173

Query: 251 TCRGIGRV---TIPPF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPA 302
            C G GR+       F       TC  C G G+I  ++C  C GSG +       V IPA
Sbjct: 174 KCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPA 233

Query: 303 GVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGG 362
           GV+ G  +R+   GNAG  G  +G+L++ ++V  DP F R G+D+  D  I + QAILG 
Sbjct: 234 GVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGT 293

Query: 363 KVDVPTLSGKV-QVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNER 421
            V+VP   G    +KIP G QP  +  L+GKGL  N  +   GD  V   V  P  L+  
Sbjct: 294 TVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLP-NMRYGRRGDLIVNVHVEIPKRLSRE 352

Query: 422 QRAILEEFAEE 432
           +R +L+E A++
Sbjct: 353 ERKLLKELAKK 363

Length = 369

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score =  240 bits (614), Expect = 2e-75
 Identities = 138/373 (36%), Positives = 194/373 (52%), Gaps = 32/373 (8%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           KRD YE+LGV  NA + EIKKA+  LA++YHPD +     A+ KF+EI +AY  L D EK
Sbjct: 4   KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVS-EEEGAEEKFKEISEAYAVLSDDEK 62

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI-FEDETS 199
           R +YD+    G +   +S  D   F      + F+      F      IF    F   + 
Sbjct: 63  RQRYDQFGHAGMDG--FSQEDI--FNNINFEDIFQ-----GFGFGIGNIFDMFGFGGGSR 113

Query: 200 H---FAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIG 256
           H      DI  E+ ++  EAA G  K +       C  C+G      ++ K C TC G G
Sbjct: 114 HGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTG 173

Query: 257 RVTIPPFT--------STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308
           +V     T        +TC  C+G G+I++  C  C G GVV   K + V IPAGV++G 
Sbjct: 174 QVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGS 233

Query: 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPT 368
            +RV   G  G RG + G+L++ +KV    IF R+GA++Y +  ISF QA LG  VDVPT
Sbjct: 234 RLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPT 293

Query: 369 LSGKVQVKIPKGVQPGQLLVLRGKG---LAKNGLFLDHGDQYVRFRVNFPTALNERQRAI 425
           + G V++KIP G Q G    L+G G   L  +G     G+ YV+ +V  P  L+ +Q+ +
Sbjct: 294 IDGPVELKIPAGTQSGTTFRLKGHGMPSLRWSG----KGNLYVKVKVVVPKKLSPKQKEL 349

Query: 426 LEEFAE---EEIN 435
           L EFA    +EI+
Sbjct: 350 LREFASISGDEIH 362

Length = 378

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score =  240 bits (614), Expect = 3e-75
 Identities = 132/367 (35%), Positives = 188/367 (51%), Gaps = 19/367 (5%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           ++D Y++LGVP++A++ EIKKA+  LA++YHPDANK +  A+ +F+EI +AY+ L D +K
Sbjct: 8   EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKK 67

Query: 141 RAQYDRRRS---RGSENEKYSAGDAEGFRY-------AGDAEGFRYAYQTHFSDSFHKIF 190
           R +YD  RS    G        G   GF +        G   G          D F  +F
Sbjct: 68  RKEYDEARSLFGNGGFRPGPGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLF 127

Query: 191 SEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICS 250
           +            D++ E+ LSF EA  G T  +   +  PC +C G G       ++C 
Sbjct: 128 NRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCP 187

Query: 251 TCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306
           TC G G+V+        +  C  CKG G I  D C+ CKGSG     + ++V IPAGV  
Sbjct: 188 TCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAGVSD 247

Query: 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDV 366
           G  IR+   G  G RG   G+L++ + V   P+F R G ++ V   ++F +A LG +V V
Sbjct: 248 GQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRV 307

Query: 367 PTLSG-KVQVKIPKGVQPGQLLVLRGKGLA-KNGLFLDHGDQYVRFRVNFPTALNERQRA 424
           PTL G  V VK+P G   G++L +RGKG   K+G     GD  V   V  P  L+ + R 
Sbjct: 308 PTLGGPPVTVKLPPGTPNGRVLRVRGKGAVRKDG---TRGDLLVTVEVAVPKDLSGKARE 364

Query: 425 ILEEFAE 431
            LE F E
Sbjct: 365 ALEAFRE 371

Length = 389

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score =  240 bits (613), Expect = 5e-75
 Identities = 132/379 (34%), Positives = 188/379 (49%), Gaps = 35/379 (9%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
           +D Y+ LGV  +AS +EIKKA+  LA++ HPDAN  +P+A+ +F+ + +A++ L D  KR
Sbjct: 9   KDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKR 68

Query: 142 AQYDRRRS-----RGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHK-------- 188
            +YD  R                G   GF   GD   F      + +D F          
Sbjct: 69  KEYDETRRLFAGGGFGGRRFDGGGGFGGFGTGGDGAEF------NLNDLFDAAGRGGGGG 122

Query: 189 ---IFSEIFEDETSHFAP-------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGR 238
              +F  +F        P       D++ E  L F EAAKG T  +   +  PC +CHG 
Sbjct: 123 IGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGS 182

Query: 239 GFPADAKTKICSTCRGIGRVTIPP----FTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVK 294
           G       K+C TC G G ++       F+  C+ C+G G II+D C  CKG+GV    +
Sbjct: 183 GARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTR 242

Query: 295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNIS 354
            + V IP GV+ G  IR+   G AG RG   G+L++ + V  D +F RDG D+ V   +S
Sbjct: 243 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVS 302

Query: 355 FTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNF 414
           FT+  LG  + VPTL G V VK+P G   G++L +RG+G+ K       GD  V  +V  
Sbjct: 303 FTELALGSTLSVPTLDGPVGVKVPAGTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAV 360

Query: 415 PTALNERQRAILEEFAEEE 433
           P  L+      LE +AE E
Sbjct: 361 PPNLDGAAAEALEAYAEAE 379

Length = 392

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score =  235 bits (600), Expect = 4e-73
 Identities = 137/376 (36%), Positives = 192/376 (51%), Gaps = 37/376 (9%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           KRD YE+LGV  +A +DEIKKA+  LA +YHPD N +N  A+  F+E+ +AYE L + +K
Sbjct: 2   KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDK 61

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSF----------HKIF 190
           R +YD+    G      SA    G  Y G    F   +   F+D F             F
Sbjct: 62  RRRYDQ---FGHAGVGSSAASGGGPGYGGGGGDFNDIFSA-FNDMFGGGARRGGGSPFGF 117

Query: 191 SEIF-----EDETSHFAP--DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPAD 243
            ++F         S   P  D+++ L L+  E AKG  K +     VPC  C+G G    
Sbjct: 118 EDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTG-SKT 176

Query: 244 AKTKICSTCRGIGRVTIPPFT--------STCSTCKGLGRIIKDHCMTCKGSGVVDGVKE 295
             T+ C TC G G V     T        + C TC G GR++KD C  C G G+  G   
Sbjct: 177 GATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVT 236

Query: 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISF 355
           VKVT+PAGV  G+ + +   GNAG RG   G+L + ++     +F R+G DV  +  +S+
Sbjct: 237 VKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSY 296

Query: 356 TQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKG---LAKNGLFLDHGDQYVRFRV 412
              +LG KV+VPTL G V++ IP G QP  +L + GKG   L  +G     GDQYVR  V
Sbjct: 297 PDLVLGTKVEVPTLDGAVKLTIPAGTQPETMLRIPGKGIGHLRGSG----RGDQYVRVNV 352

Query: 413 NFPTALNERQRAILEE 428
             P  ++ + + +L+E
Sbjct: 353 FVPKEVSHQDKELLKE 368

Length = 397

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score =  232 bits (594), Expect = 2e-72
 Identities = 138/367 (37%), Positives = 190/367 (51%), Gaps = 36/367 (9%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           SKRD YE+LGV  NAS DE+KKA+  LA++YHPD NK  P A+ KF+E+++AY+TL D +
Sbjct: 2   SKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-PDAEDKFKEVKEAYDTLSDPQ 60

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
           K+A YD+       N+ +  G A  F                    F  IF   F     
Sbjct: 61  KKAHYDQF-GHTDPNQGFGGGGAGDF------------------GGFSDIFDMFFGGGGG 101

Query: 200 HFAP-------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC 252
              P       D+Q  + L F EA  G    +       C +CHG G     K + CS C
Sbjct: 102 RRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHC 161

Query: 253 RGIGRVTI---PPF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304
            G G++ +    PF        C  C+G G+IIK  C TC G G V   K++ V +PAG+
Sbjct: 162 GGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGI 221

Query: 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKV 364
           D G  +RV   G AG  G   G+L++   V     F RDG D+Y +  ++F Q  LG ++
Sbjct: 222 DHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEI 281

Query: 365 DVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRA 424
           +VPTL+GKV++KIP G Q G    LRGKG+  N      GDQ+V+ RV  P  L E+++ 
Sbjct: 282 EVPTLNGKVKLKIPAGTQTGTSFRLRGKGVP-NVHGRGQGDQHVQVRVVTPKNLTEKEKE 340

Query: 425 ILEEFAE 431
           ++ EFA 
Sbjct: 341 LMREFAG 347

Length = 371

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score =  231 bits (591), Expect = 4e-72
 Identities = 134/369 (36%), Positives = 193/369 (52%), Gaps = 17/369 (4%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
           +D Y++LGV + ASQ ++KKA+  LAKQYHPD   +   A++KF+EI  AY+ L+D +KR
Sbjct: 3   QDYYQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKDAEKKFKEINAAYDVLKDEQKR 61

Query: 142 AQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHF 201
           A YDR      +N++   G        G+  GF       F D F            +  
Sbjct: 62  AAYDRFGHDAFQNQQSRGG-------GGNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSS 114

Query: 202 ---APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIG-- 256
                D++  L ++  EA  G  K++SF + V CD+CHG G         C  C G+G  
Sbjct: 115 KVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGAT 174

Query: 257 RVTIPPFT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPE 314
           R+    FT    C  C+G G+IIK+ C  C G G     + + V IPAGV++G  IR   
Sbjct: 175 RMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTG 234

Query: 315 AGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLS-GKV 373
            G AG RG   G+L++ + +    I+  DGA+++    ISF  A LGG+++VP +  GKV
Sbjct: 235 EGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKV 294

Query: 374 QVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433
            + IP G Q G  L LR KG++K    +  GD      V  P  L++RQR +LEEF +E 
Sbjct: 295 NLTIPAGTQNGDQLRLRSKGMSKMRSTI-RGDMLTHIHVEVPKNLSKRQRELLEEFKKES 353

Query: 434 INNENNTSA 442
           IN + N  +
Sbjct: 354 INEKENDGS 362

Length = 372

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score =  229 bits (585), Expect = 5e-71
 Identities = 130/367 (35%), Positives = 186/367 (50%), Gaps = 17/367 (4%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           D Y +LGV + AS +EIKKA+  LA +YHPD N  +  A+++F+E+ +AYE L D++KR 
Sbjct: 2   DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRE 61

Query: 143 QYDRRRSRGSENEKYSAGDA------EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIF-- 194
            YDR    G        G A      +  R    A G  +     F +       E F  
Sbjct: 62  SYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGM 121

Query: 195 --EDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC 252
                 +      +V + LSF EAAKG  K +    +  CD+C G G  +    K+C  C
Sbjct: 122 RGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRC 181

Query: 253 RGIGRVT----IPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308
           +G G+V          STC  C G GR+I D C  C+G G +   + V V IPAGVDSG 
Sbjct: 182 KGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGM 241

Query: 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPT 368
            +++   G+AG  G   G+L++ + V   P+F R G D+ ++  I F  A LG K ++PT
Sbjct: 242 RLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPT 301

Query: 369 L--SGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAIL 426
           L   G  ++ IP+G+Q G +L +RG+G   N      GD  VR  V  P  L+E Q+ +L
Sbjct: 302 LLKEGTCRLTIPEGIQSGTILKVRGQGFP-NVHGKGRGDLLVRISVETPQNLSEEQKELL 360

Query: 427 EEFAEEE 433
            +FA  E
Sbjct: 361 RQFAATE 367

Length = 391

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score =  222 bits (567), Expect = 1e-68
 Identities = 123/372 (33%), Positives = 186/372 (50%), Gaps = 35/372 (9%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S+R  Y++LGV ++A+ +EIK A+  LA +YHPD NK N  ++ KF+E  +AYE LRD +
Sbjct: 2   SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPK 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSD---SFHKIFSEIFED 196
           KR  YD+    G                   A GF     T FSD    F  IF + F  
Sbjct: 62  KRQAYDQFGKAG---------------VNAGAGGFGQGAYTDFSDIFGDFGDIFGDFFGG 106

Query: 197 ETS-----------HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
                             D++  L +S  +AA G    +       C  C+G G    + 
Sbjct: 107 GRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSS 166

Query: 246 TKICSTCRGIGRVT----IPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIP 301
              C  C G G++          +TC TC+G G +I + C TC G G+ +  + + + IP
Sbjct: 167 PTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIP 226

Query: 302 AGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILG 361
            GV++G  ++V   G AG  G  HG+L++   +    +F R G D+ +   IS  QAILG
Sbjct: 227 PGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILG 286

Query: 362 GKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNE 420
            +++VPT+ GK  ++KIP+G + GQ+  L+G G+   G +   GDQ+V  ++  P  +  
Sbjct: 287 AEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLGAY-GKGDQHVIVKIEIPKKITR 345

Query: 421 RQRAILEEFAEE 432
           RQR ++EEFA E
Sbjct: 346 RQRELIEEFARE 357

Length = 372

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score =  217 bits (554), Expect = 1e-66
 Identities = 119/375 (31%), Positives = 194/375 (51%), Gaps = 22/375 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
            K+D YE+LGV + AS+ EI++A+  LAKQYHPD NK+ P A  K  EI +A + L D +
Sbjct: 2   KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-PDAHDKMVEINEAADVLLDKD 60

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
           KR QYD+    G      S+G +  F   GD E       +    SF  IFS+ F    S
Sbjct: 61  KRKQYDQF---GHAAFDGSSGFSSNF---GDFEDLFSNMGSSGFSSFTNIFSDFFGSNKS 114

Query: 200 HF-----APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRG 254
            +        + +++ L+F E   G  K +  D    C  C G G  +++   IC+ C G
Sbjct: 115 DYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHG 174

Query: 255 IGRVTIP----PF----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306
            G V +      F    ++ C+ C G G+IIK+ C  CKG G     K+++V IP G+  
Sbjct: 175 TGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRP 234

Query: 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSR-DGADVYVDSNISFTQAILGGKVD 365
              I++ + G+A      +G+L I + + +  +F   +  D+ +  NIS+  AILG ++ 
Sbjct: 235 NQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEII 294

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAI 425
           + TL G ++ K+PK +   +L+++  KGL K+      GD  ++  +  P  L+++++ +
Sbjct: 295 IKTLDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKEL 354

Query: 426 LEEFAEE-EINNENN 439
           +E+  E+   N ENN
Sbjct: 355 IEQIYEQTSFNPENN 369

Length = 372

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score =  217 bits (554), Expect = 2e-66
 Identities = 125/370 (33%), Positives = 165/370 (44%), Gaps = 43/370 (11%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
           RD Y LLGV  NAS  EIK+A+  LA++ HPD N +   A+ KF+EI  AYE L D EKR
Sbjct: 3   RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD-EEAQEKFKEISVAYEVLSDPEKR 61

Query: 142 AQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHF 201
              D              G   GF   GD                  +F   F    +  
Sbjct: 62  RIVDLGGDPLESAGGGGGGFGGGFGGLGD------------------VFEAFFGGGAASR 103

Query: 202 AP--------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
            P        D  + + L   E A G TK V+ D  V CD CHG+G   D+K   C TC 
Sbjct: 104 GPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCG 163

Query: 254 GIGRVTIPP-------FTST-CSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
           G G V            TS  C TC+G+G +I D C  C G G V   +E+ V IPAGV 
Sbjct: 164 GRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVG 223

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
            G  IR+   G  G  G   G+L++++      +F RDG D++   ++    A LG  V 
Sbjct: 224 DGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVT 283

Query: 366 VPTLS-GKVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFPTALNER 421
           V  +  G  ++ IP G QPG ++ LRG+G+      G     GD +    V  PT L+  
Sbjct: 284 VEAILDGPSEITIPPGTQPGSVITLRGRGMPHLRSGG----RGDLHAHVEVVVPTRLDHE 339

Query: 422 QRAILEEFAE 431
              +L E   
Sbjct: 340 DIELLRELKA 349

Length = 378

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score =  211 bits (538), Expect = 3e-64
 Identities = 131/377 (34%), Positives = 191/377 (50%), Gaps = 55/377 (14%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDAN-KNNPSAKRKFQEIRDAYETLRDSEK 140
           +D Y++LGV  NASQ++IKKAF  LAK++HPD +  N   A+ KF+EI +AYE L D +K
Sbjct: 3   KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQK 62

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIF------ 194
           R QYD+    G+ +            +      F +   THFSD  + IF++IF      
Sbjct: 63  RRQYDQT---GTVD------------FGAGGSNFNWDNFTHFSD-INDIFNQIFGGNFGS 106

Query: 195 --------EDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKT 246
                   +  T +   DI   L +S  +A  G  K + +     C  C G G   + K 
Sbjct: 107 DFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTG-AKNGKL 165

Query: 247 KICSTCRGIGR------------VTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVK 294
             C TC G G+            VT+    +TC TC G GRI ++ C  C G+G V   +
Sbjct: 166 ITCPTCHGTGQQRIVRGQGFFRMVTV----TTCRTCGGRGRIPEEKCPRCNGTGTVVVNE 221

Query: 295 EVKVTIPAGVDSGDTIRVPEAGNA-GGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNI 353
           ++ V IP G      +RV   G + GGR    G+L++ L+V +DP   R   D+YVD  I
Sbjct: 222 DISVKIPKGATDNLRLRVKGKGQSYGGRT---GDLYVVLRVNNDPNIQRINDDLYVDQKI 278

Query: 354 SFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK-NGLFLDHGDQYVRFRV 412
           +F QA LGG++++     K  +KIP+G QPG++L ++G G+   NG     GD  VR  V
Sbjct: 279 NFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLKIKGAGMPHLNG--HGSGDLLVRINV 336

Query: 413 NFPTALNERQRAILEEF 429
             P  L  +Q+ ++ EF
Sbjct: 337 EVPKRLTSKQKELIREF 353

Length = 365

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score =  209 bits (533), Expect = 2e-63
 Identities = 127/367 (34%), Positives = 172/367 (46%), Gaps = 38/367 (10%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           D YELLGV   AS DEIK A+  LA +YHPD NK    A  KF +I +AY  L D+EKRA
Sbjct: 3   DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE-KGAAEKFAQINEAYAVLSDAEKRA 61

Query: 143 QYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI-----FEDE 197
            YDR  +  +       GD  G        GF         D F ++F            
Sbjct: 62  HYDRFGT--APGAGMPGGDPFG------GMGFDPM------DIFEQLFGGAGFGGGRGRR 107

Query: 198 TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHG-RGFPADAKTKICSTCRGIG 256
                 D++ E  ++  +A  G    V  D    C+ CHG R  P     K C TCRG G
Sbjct: 108 GPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAG 167

Query: 257 RV-----TIPPFTST---CSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308
            V     TI     T   C TC+G G+II D C  C+G G     + VKV +P G+D G 
Sbjct: 168 AVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGY 227

Query: 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPT 368
            IRV   GN G  G  +G+L++ +++   P   R+   +  ++ I F +A LGG++ VPT
Sbjct: 228 RIRVAGMGNEGPGG--NGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPT 285

Query: 369 LSGKVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFPTALNERQRAI 425
           L G   +++  G Q G L  LRG+G+ +    G     GD  V + +  P  L+   R  
Sbjct: 286 LDGPQVIEVKPGTQHGDLHRLRGQGMPRLQGAGT----GDLIVEYEIAVPKQLSPEAREA 341

Query: 426 LEEFAEE 432
           LE +A  
Sbjct: 342 LEAYARA 348

Length = 371

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score =  196 bits (499), Expect = 1e-58
 Identities = 120/362 (33%), Positives = 192/362 (53%), Gaps = 20/362 (5%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           KRD YE+LG+ + AS+DEIKKA+  +A +YHPD NK N  A+  F+E  +AYE L D  K
Sbjct: 2   KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNK 61

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSH 200
           RAQYDR      E      G  EGF  +G   GF   ++  F D F   F+     + + 
Sbjct: 62  RAQYDRFGHTAFE----GGGGFEGF--SGGFSGFSDIFED-FGDIFDSFFTGNRGQDKNR 114

Query: 201 F---APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGR 257
                 D+  ++ +S  +A  G   +++    + C+SC G+         IC+ C G GR
Sbjct: 115 KHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGR 174

Query: 258 VT----IPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP 313
           V         T+TC  C G G+II + C +CKG G +   + +++ IPAG+D    I++ 
Sbjct: 175 VMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMR 234

Query: 314 EAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK- 372
             G+     +Q+G+L+IK+ +    IF R+G D+Y    ISFTQA LG ++ + T++ K 
Sbjct: 235 GKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKK 294

Query: 373 VQVKIPKGVQPGQLLVLRGKGLA--KNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFA 430
           +++KIPKG +  + ++++ +G+       F   G+  +  ++  P  LN     +LE  +
Sbjct: 295 IKIKIPKGTENDEQIIIKNEGMPILHTEKF---GNLILIIKIKTPKNLNSNAIKLLENLS 351

Query: 431 EE 432
           +E
Sbjct: 352 KE 353

Length = 365

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score =  181 bits (460), Expect = 7e-53
 Identities = 118/361 (32%), Positives = 185/361 (51%), Gaps = 40/361 (11%)

Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           YE+L V ++++Q+ IKK++  LA +YHPD N  +  A+ KF+ I +AY  L D +KRA Y
Sbjct: 6   YEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALY 65

Query: 145 DRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------- 196
           DR                +G   AG       A Q+ FSD F  + S  FED        
Sbjct: 66  DRY-------------GKKGLNQAG-------ASQSDFSDFFEDLGS-FFEDAFGFGARG 104

Query: 197 ---ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
              + S  APD    + LSF EA  GC K +       C+SC G G   D   + C  C 
Sbjct: 105 SKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTG-AKDKALETCKQCN 163

Query: 254 GIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309
           G G+V +      F  TC  C+G G+IIK  C  CKG   +   +E+   IP G+D  + 
Sbjct: 164 GQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNR 223

Query: 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL 369
           + +   GN   +G++ G+L+++ +V +D  F R+G D+++++ + FT   LG  + VP+L
Sbjct: 224 MVLKNKGNEYEKGKR-GDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSL 282

Query: 370 SG-KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEE 428
            G ++++KIP+  +  Q    R +G+ K+      G   V  +V +P +LN+ Q+ +LE+
Sbjct: 283 KGDELELKIPRNARDRQTFAFRNEGV-KHPESSYRGSLIVELQVIYPKSLNKEQQELLEK 341

Query: 429 F 429
            
Sbjct: 342 L 342

Length = 369

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score =  169 bits (431), Expect = 5e-51
 Identities = 59/130 (45%), Positives = 83/130 (63%), Gaps = 1/130 (0%)

Query: 289 VVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348
            V   K + V IPAGVD G  +R+   G+AG  G   G+L++ ++V   P+F RDG D+Y
Sbjct: 30  RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLY 89

Query: 349 VDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYV 408
            +  IS T+A+LGG+++VPTL GKV++KIP G QPG +L L+GKG+ +       GD YV
Sbjct: 90  CEVPISLTEALLGGEIEVPTLGGKVKLKIPPGTQPGTVLRLKGKGMPRLRGG-GRGDLYV 148

Query: 409 RFRVNFPTAL 418
             +V FP  L
Sbjct: 149 EVKVEFPKKL 158

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score =  151 bits (383), Expect = 3e-41
 Identities = 110/379 (29%), Positives = 156/379 (41%), Gaps = 47/379 (12%)

Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           YE+L + ++ +  EIKKA+  LA ++HPD   +      KF+EI  AYE L D EKR  Y
Sbjct: 31  YEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIY 86

Query: 145 DRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPD 204
           D     G E       DA                    SD F  IF    +        D
Sbjct: 87  DEYGEEGLEG-GEQPADA--------------------SDLFDLIFGGGRKPGGKKRGED 125

Query: 205 IQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIG-RVTIPPF 263
           I   L ++  +   G  + ++ +  V C +C G G P DA    C  C G G RV I   
Sbjct: 126 IVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVD-CKLCNGQGIRVQIRQM 184

Query: 264 TS-------TCSTCKGLGRII--KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPE 314
            S       TC++C G G+II     C  C G GV    K ++V I  GV   +  ++  
Sbjct: 185 GSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVP--NQHKITF 242

Query: 315 AGNAGGR-GRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-K 372
            G A  +     GN+   L       F R+G D+++   IS  +A+ G    +  L G K
Sbjct: 243 HGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRK 302

Query: 373 VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP-----TALNERQRAI 425
           + V  P G  V+PG + V+  +G+         G+ YV F V FP     T   +     
Sbjct: 303 LLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKS 362

Query: 426 LEEFAEEEINNENNTSAEE 444
           L     EE  +  +T  E 
Sbjct: 363 LFPQNPEEKKDLEDTEIEV 381

Length = 421

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score =  138 bits (349), Expect = 2e-37
 Identities = 93/371 (25%), Positives = 155/371 (41%), Gaps = 99/371 (26%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
           +D Y ++GV        IK A+  LA++YHPD +K  P A+ +F+E+ +A+E L D ++R
Sbjct: 4   KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE-PDAEARFKEVAEAWEVLSDEQRR 62

Query: 142 AQYDR-----------RRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIF 190
           A+YD+           R+ +  + + ++A D                    F D    IF
Sbjct: 63  AEYDQLWQHRNDPQFNRQFQHGDGQSFNAED--------------------FDD----IF 98

Query: 191 SEIFEDETSHF-------APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPAD 243
           S IF                DI++E+ +   E      + +S+                 
Sbjct: 99  SSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISY----------------- 141

Query: 244 AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303
                           +P + +        G I ++   T         VK     IPAG
Sbjct: 142 ---------------NLPVYNA-------FGMIEQEIPKTLN-------VK-----IPAG 167

Query: 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGK 363
           V +G  IR+   G  G  G  +G+L++ + +A  P+F   G D+ +   ++  +A LG K
Sbjct: 168 VGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAK 227

Query: 364 VDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLA-KNGLFLDHGDQYVRFRVNFPTALNERQ 422
           V VPTL   + + IP G Q GQ L ++GKGL  K       GD Y   ++  P   +E+ 
Sbjct: 228 VTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQ----TGDLYAVLKIVMPPKPDEKT 283

Query: 423 RAILEEFAEEE 433
            A+ ++ A+ +
Sbjct: 284 AALWQQLADAQ 294

Length = 306

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score =  109 bits (274), Expect = 2e-29
 Identities = 38/63 (60%), Positives = 48/63 (76%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           D YE+LGVP +AS +EIKKA+  LA +YHPD N  +P+A+ KF+EI +AYE L D EKRA
Sbjct: 1   DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRA 60

Query: 143 QYD 145
            YD
Sbjct: 61  IYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score =  101 bits (254), Expect = 2e-26
 Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 346 DVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHG 404
           D+YV   IS  +A+LGG V+VPTL G+ V++KIP G QPG  L ++GKG+  N      G
Sbjct: 1   DLYVTLPISLKEALLGGTVEVPTLDGRKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRG 60

Query: 405 DQYVRFRVNFPTALNERQRAI 425
           D  V   V  P  L+  Q+ +
Sbjct: 61  DLIVTLNVKIPKKLSSEQKEL 81

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 92.2 bits (230), Expect = 2e-23
 Identities = 31/55 (56%), Positives = 42/55 (76%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137
           D Y++LGVP +AS +EIKKA+  LA +YHPD N ++P A+ KF+EI +AYE L D
Sbjct: 1   DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 99.2 bits (247), Expect = 2e-23
 Identities = 61/160 (38%), Positives = 82/160 (51%), Gaps = 17/160 (10%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           + +D Y +LGVP+NASQDEIKKAF  LA++YHPD NK +P A+ KF+EI +AY  L D E
Sbjct: 2   AYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPE 60

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIF--------- 190
           KR  YD   +  +       G   G    GD  GF       FSD F ++F         
Sbjct: 61  KRRIYDTYGT--TAASAGWQGPPPGPPGGGDFSGFNVG---DFSDFFQQLFGGRGGFGGF 115

Query: 191 SEIFED--ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDA 228
            ++F      +    D++ EL L+  EA +G  K V    
Sbjct: 116 GDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVAG 155

Length = 291

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 91.5 bits (228), Expect = 4e-23
 Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRDSEK 140
            D YE+LGVP +AS DEIKKA+  LA +YHPD N  +   A+ KF+EI +AYE L D EK
Sbjct: 1   TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60

Length = 60

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 96.5 bits (240), Expect = 2e-22
 Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 8/140 (5%)

Query: 292 GVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351
             + + V IP GV  G  IR+       G+GRQ G+L++ +++   P+F  +G D+Y   
Sbjct: 154 AGERLSVRIPPGVREGQVIRLA------GKGRQGGDLYLVVRLLPHPVFRLEGDDLYATV 207

Query: 352 NISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFR 411
           ++    A++GGKV V TL G V+V IP   Q G+ L L+GKG  +       GDQY   R
Sbjct: 208 DVPAPIAVVGGKVRVMTLDGPVEVTIPPRTQAGRKLRLKGKGWPRGP--AGRGDQYAEVR 265

Query: 412 VNFPTALNERQRAILEEFAE 431
           +  PT     +  + ++ AE
Sbjct: 266 ITIPTRPTPEEERLYKQLAE 285

Length = 291

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 84.5 bits (208), Expect = 1e-18
 Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 5/128 (3%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRDSE 139
             D YE+LGVP NAS +EIKKA+  LA +YHPD N  +P  A+ KF+EI +AYE L D E
Sbjct: 5   LLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPE 64

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQT---HFSDSFHKIFSEIFED 196
           +RA+YD+  +      K S  ++  F   G  +      +              +++   
Sbjct: 65  RRAEYDKIGADNYFPGK-SYRESAAFPIEGSLQLTGLYEEWRGKRNKTERKASLADLLSR 123

Query: 197 ETSHFAPD 204
             S  A  
Sbjct: 124 GLSGLAAA 131

Length = 237

>gnl|CDD|199908 cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40

 Score = 76.9 bits (190), Expect = 1e-17
 Identities = 27/65 (41%), Positives = 32/65 (49%), Gaps = 8/65 (12%)

Query: 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMT 283
           C +C+G G     K K C TC G G+V              +TC TC G G+IIKD C  
Sbjct: 1   CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQGTGFGFFQTQTTCPTCGGTGKIIKDPCPK 60

Query: 284 CKGSG 288
           CKG G
Sbjct: 61  CKGKG 65

Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding. Length = 65

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 84.9 bits (209), Expect = 2e-17
 Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           KRD YE+LG+  +A + EIKKAF  LAK+YHPD NK  P A   F EI +A + L + +K
Sbjct: 1   KRDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNK-APDAASIFAEINEANDVLSNPKK 59

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGF 165
           RA YD+    G + E      A+ F
Sbjct: 60  RANYDKYGHDGVDREDDFDFQADVF 84

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|216058 pfam00684, DnaJ_CXXCXGXG, DnaJ central domain

 Score = 65.1 bits (159), Expect = 1e-13
 Identities = 27/65 (41%), Positives = 29/65 (44%), Gaps = 8/65 (12%)

Query: 232 CDSCHGRGFPADAKTKICSTCRGIGRVTI----PPFT----STCSTCKGLGRIIKDHCMT 283
           C  CHG G     K K C  C G G+V      P        TC  C G G+IIKD C  
Sbjct: 1   CPHCHGTGAKPGKKPKTCPQCNGSGQVVKRQRTPGGVFQMQQTCPKCGGTGKIIKDPCKV 60

Query: 284 CKGSG 288
           CKG G
Sbjct: 61  CKGKG 65

The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found. Length = 65

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 56.0 bits (136), Expect = 8e-09
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 7/61 (11%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPD--ANKNNPS-----AKRKFQEIRDAYETL 135
           D Y++LGV E+    EIK+A+  L  ++HPD    K  P      AK K QEI+ AYE +
Sbjct: 201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELI 260

Query: 136 R 136
           +
Sbjct: 261 K 261

Length = 267

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 56.1 bits (135), Expect = 2e-08
 Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKR-----KFQEIRDAYETLRD 137
           DPYE+LG+ ++ S+ +IKK + ML+ ++HPD      +  R     K++ I  AY  L D
Sbjct: 99  DPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTD 158

Query: 138 SEKRAQY 144
            ++R  Y
Sbjct: 159 KKRRENY 165

Length = 610

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score = 47.8 bits (115), Expect = 1e-06
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 13/78 (16%)

Query: 345 ADVYVDSNISFTQAILGGKVDVPTLSG---------KVQVKIPKGVQPGQLLVLRGKGLA 395
           AD+  D  ++  +A  G + ++  +            + VKIP GV  GQ L LRG+G A
Sbjct: 1   ADLRYDLELTLEEAYFGKEKEI-KIPRKVTRVREKKTLTVKIPAGVDDGQRLRLRGEGDA 59

Query: 396 -KNGLFLDHGDQYVRFRV 412
             NG     GD YV  RV
Sbjct: 60  GPNG--GPPGDLYVVIRV 75

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 7/63 (11%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPD--ANKNNP-----SAKRKFQEIRDAYE 133
           + D  ++LGV   A QD IKKA+  L  + HPD  A K          K K QEI++AYE
Sbjct: 112 REDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYE 171

Query: 134 TLR 136
            ++
Sbjct: 172 DIK 174

Length = 174

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 291 DGVKEVKVTIPAGVDSGDTIRVPEAG-NAGGRGRQHGNLFIKLKV 334
           DG ++VK+ IPAG   GD +R+   G      G   G+L + L V
Sbjct: 25  DG-RKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRGDLIVTLNV 68

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 47.9 bits (113), Expect = 1e-05
 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y++LGV  NA   EI + +  LA+ Y+P     N     KF++I +AY+ L D +K+  Y
Sbjct: 576 YDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMY 634

Query: 145 DR 146
           ++
Sbjct: 635 NK 636

Length = 1136

>gnl|CDD|211601 TIGR00714, hscB, Fe-S protein assembly co-chaperone HscB

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 96  QDEIKKAFHMLAKQYHPDANKN---NPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Q  ++K +  L  QYHPDA+       +A ++   +  AY TL+D  +RA+Y
Sbjct: 5   QSRLRKRYRQLQAQYHPDASGMAQEQLAASQQSTTLNQAYHTLKDPLRRAEY 56

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock [Protein fate, Protein folding and stabilization]. Length = 155

>gnl|CDD|167217 PRK01356, hscB, co-chaperone HscB; Provisional

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 5/65 (7%)

Query: 85  YELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPSAKRKFQ---EIRDAYETLRDSE 139
           ++LLG+P+  + D   ++K +  +  +YHPD  K     ++      E+ +AY TL+D+ 
Sbjct: 5   FQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDAL 64

Query: 140 KRAQY 144
           KRA+Y
Sbjct: 65  KRAEY 69

Length = 166

>gnl|CDD|235133 PRK03578, hscB, co-chaperone HscB; Provisional

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)

Query: 79  SSKRDPYELLGVPENASQDE--IKKAFHMLAKQYHPDANKNNPSAKRKFQ-----EIRDA 131
           S K D + L G+P   + DE  +  A+  +  Q HPD       A+++          +A
Sbjct: 3   SLKDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEA 62

Query: 132 YETLRDSEKRAQY 144
           Y+TLRD  KRA+Y
Sbjct: 63  YQTLRDPLKRARY 75

Length = 176

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 81  KRDPYELLGVPE---NASQDEIKKAFHMLAKQYHPD--ANKNNPSAKRKFQEIRDAYETL 135
           K D Y LLG+ +    A   +I KA      +YHPD  A   N      F+ I+ A E L
Sbjct: 42  KVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVL 101

Query: 136 RDSEKRAQYD 145
            D + R QYD
Sbjct: 102 GDRKLRLQYD 111

Length = 379

>gnl|CDD|179914 PRK05014, hscB, co-chaperone HscB; Provisional

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 13/72 (18%)

Query: 83  DPYELLGVPENASQDEIKKA-----FHMLAKQYHPDANKNNPSAKR-----KFQEIRDAY 132
           D + L G+P   ++ +I        +  L +Q+HPD   N    +R     +   I DAY
Sbjct: 2   DYFTLFGLP---ARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAY 58

Query: 133 ETLRDSEKRAQY 144
           +TL+   KRA+Y
Sbjct: 59  QTLKHPLKRAEY 70

Length = 171

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 40.2 bits (93), Expect = 0.002
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 2/87 (2%)

Query: 322 GRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGV 381
           G   G+L +  KV     F      ++V + +    A  GG +DV   +    V+IP G+
Sbjct: 723 GNGCGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKLFNVRIPGGI 782

Query: 382 QPGQLLVLRGKGLAKNGLFLDHGDQYV 408
           +    ++ +  GL K     D G   V
Sbjct: 783 KVNDQVIFKDLGLTKT--KYDKGSLIV 807

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|178709 PLN03165, PLN03165, chaperone protein dnaJ-related; Provisional

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 14/64 (21%)

Query: 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTI-----PPFTSTCSTCKGLGRIIKDHCMTCK 285
           PC  C G G       ++C  C G G VT+         S C  C G G +    C TC+
Sbjct: 43  PCFPCSGTG------AQVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSLT---CTTCQ 93

Query: 286 GSGV 289
           GSG+
Sbjct: 94  GSGI 97

Length = 111

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	454
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	100.0
PRK14296	372	chaperone protein DnaJ; Provisional	100.0
PRK14288	369	chaperone protein DnaJ; Provisional	100.0
PRK14279	392	chaperone protein DnaJ; Provisional	100.0
PRK14286	372	chaperone protein DnaJ; Provisional	100.0
PRK14284	391	chaperone protein DnaJ; Provisional	100.0
PRK14277	386	chaperone protein DnaJ; Provisional	100.0
PRK14295	389	chaperone protein DnaJ; Provisional	100.0
PRK14298	377	chaperone protein DnaJ; Provisional	100.0
PRK14278	378	chaperone protein DnaJ; Provisional	100.0
PRK14276	380	chaperone protein DnaJ; Provisional	100.0
PRK14285	365	chaperone protein DnaJ; Provisional	100.0
PRK14294	366	chaperone protein DnaJ; Provisional	100.0
PRK14301	373	chaperone protein DnaJ; Provisional	100.0
PRK14297	380	chaperone protein DnaJ; Provisional	100.0
PRK14287	371	chaperone protein DnaJ; Provisional	100.0
PRK14280	376	chaperone protein DnaJ; Provisional	100.0
PTZ00037	421	DnaJ_C chaperone protein; Provisional	100.0
PRK10767	371	chaperone protein DnaJ; Provisional	100.0
PRK14282	369	chaperone protein DnaJ; Provisional	100.0
PRK14281	397	chaperone protein DnaJ; Provisional	100.0
PRK14300	372	chaperone protein DnaJ; Provisional	100.0
PRK14291	382	chaperone protein DnaJ; Provisional	100.0
PRK14283	378	chaperone protein DnaJ; Provisional	100.0
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	100.0
PRK14290	365	chaperone protein DnaJ; Provisional	100.0
PRK14289	386	chaperone protein DnaJ; Provisional	100.0
PRK14293	374	chaperone protein DnaJ; Provisional	100.0
PRK14292	371	chaperone protein DnaJ; Provisional	100.0
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	100.0
PRK14299	291	chaperone protein DnaJ; Provisional	100.0
PRK10266	306	curved DNA-binding protein CbpA; Provisional	100.0
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	100.0
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	100.0
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	100.0
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.88
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.85
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.77
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.74
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.73
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.72
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.71
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.71
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.7
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.65
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.63
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.62
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.6
PHA03102	153	Small T antigen; Reviewed	99.59
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.59
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.57
PRK05014	171	hscB co-chaperone HscB; Provisional	99.47
PRK01356	166	hscB co-chaperone HscB; Provisional	99.45
PRK03578	176	hscB co-chaperone HscB; Provisional	99.44
PRK00294	173	hscB co-chaperone HscB; Provisional	99.44
PRK14282	369	chaperone protein DnaJ; Provisional	99.44
PRK14290	365	chaperone protein DnaJ; Provisional	99.4
PRK14298	377	chaperone protein DnaJ; Provisional	99.38
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.37
PRK14294	366	chaperone protein DnaJ; Provisional	99.36
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.35
PRK14285	365	chaperone protein DnaJ; Provisional	99.34
PRK10767	371	chaperone protein DnaJ; Provisional	99.33
PTZ00100	116	DnaJ chaperone protein; Provisional	99.33
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.33
PRK14301	373	chaperone protein DnaJ; Provisional	99.3
PRK14284	391	chaperone protein DnaJ; Provisional	99.26
PRK14287	371	chaperone protein DnaJ; Provisional	99.26
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.25
PRK14300	372	chaperone protein DnaJ; Provisional	99.25
PRK14288	369	chaperone protein DnaJ; Provisional	99.25
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.24
PRK14278	378	chaperone protein DnaJ; Provisional	99.23
PRK14281	397	chaperone protein DnaJ; Provisional	99.21
PRK14276	380	chaperone protein DnaJ; Provisional	99.21
PRK14279	392	chaperone protein DnaJ; Provisional	99.21
PRK14286	372	chaperone protein DnaJ; Provisional	99.2
PRK14280	376	chaperone protein DnaJ; Provisional	99.2
PRK14293	374	chaperone protein DnaJ; Provisional	99.19
PRK14289	386	chaperone protein DnaJ; Provisional	99.18
PRK14297	380	chaperone protein DnaJ; Provisional	99.17
PRK14292	371	chaperone protein DnaJ; Provisional	99.17
PHA02624	647	large T antigen; Provisional	99.16
PRK14295	389	chaperone protein DnaJ; Provisional	99.15
PRK14291	382	chaperone protein DnaJ; Provisional	99.15
PRK14277	386	chaperone protein DnaJ; Provisional	99.14
PRK14296	372	chaperone protein DnaJ; Provisional	99.13
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	99.11
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.1
PRK01773	173	hscB co-chaperone HscB; Provisional	99.1
PRK14283	378	chaperone protein DnaJ; Provisional	99.09
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.08
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	99.0
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	98.91
PRK14299	291	chaperone protein DnaJ; Provisional	98.8
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	98.72
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.62
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	98.55
PLN03165	111	chaperone protein dnaJ-related; Provisional	98.36
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	98.34
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.29
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.27
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	98.07
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	97.77
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	97.66
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	97.56
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	97.46
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	97.34
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	96.56
PLN03165	111	chaperone protein dnaJ-related; Provisional	96.5
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.37
KOG2813	406	consensus Predicted molecular chaperone, contains	96.19
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.12
KOG0431	453	consensus Auxilin-like protein and related protein	95.45
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	95.23
KOG2813	406	consensus Predicted molecular chaperone, contains	94.35
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	92.42
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	86.2
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	85.54
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	80.78
PF14687	112	DUF4460: Domain of unknown function (DUF4460)	80.5
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	80.21

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2.5e-90  Score=685.29  Aligned_cols=337  Identities=45%  Similarity=0.813  Sum_probs=302.9

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCcccc
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS  158 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~  158 (454)
                      ++.+|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|+|||||||||+||++||+||..+..+.   
T Consensus         1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~g---   77 (371)
T COG0484           1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAG---   77 (371)
T ss_pred             CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccC---
Confidence            35689999999999999999999999999999999999889999999999999999999999999999987765411   


Q ss_pred             CCCCCCccccCCCCcccccccccccCcccchhccccccc--------cccCCCCcEEEEEEEeeccccCcceeeeeceee
Q 012891          159 AGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV  230 (454)
Q Consensus       159 ~~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~--------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~  230 (454)
                        +++++       .|.     .|+.+|.+||+++|++.        .+.++.|+.+.|+|||+|||.|+++++.+++.+
T Consensus        78 --g~gg~-------g~~-----~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~  143 (371)
T COG0484          78 --GFGGF-------GFG-----GFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSV  143 (371)
T ss_pred             --CcCCC-------CcC-----CCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceee
Confidence              11111       111     11124556666666321        245789999999999999999999999999999


Q ss_pred             cccCCCCCCccCCCccccCCCccccceEEeC------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCcc
Q 012891          231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV  304 (454)
Q Consensus       231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~  304 (454)
                      .|+.|+|+|+..+..+.+|++|+|+|.+...      .++++|+.|+|+|.+++++|.+|+|.|++...++++|.||+|+
T Consensus       144 ~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv  223 (371)
T COG0484         144 TCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGV  223 (371)
T ss_pred             ECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCC
Confidence            9999999999999999999999999987543      2488999999999999999999999999999999999999999


Q ss_pred             CCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCC
Q 012891          305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG  384 (454)
Q Consensus       305 ~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g  384 (454)
                      .+|++|++.|+|+++..|+++|||||.|.|++|+.|.|+|+|||++++|++.+|+||++++||||||.++|+||+++++|
T Consensus       224 ~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G  303 (371)
T COG0484         224 DDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTG  303 (371)
T ss_pred             ccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCCccC
Confidence            99999999999999988999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       385 ~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      ++++|+|+|||.... ..+|||||+++|++|++||++|+++|++|+...
T Consensus       304 ~~~rl~gkG~p~~~~-~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~~~  351 (371)
T COG0484         304 EVFRLRGKGMPKLRS-GGRGDLYVRVKVETPKNLSDEQKELLEEFAKSL  351 (371)
T ss_pred             cEEEEcCCCccccCC-CCcCCEEEEEEEEcCCCCCHHHHHHHHHHHHhh
Confidence            999999999997633 236999999999999999999999999999865

>PRK14296 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.9e-81  Score=637.06  Aligned_cols=342  Identities=32%  Similarity=0.641  Sum_probs=296.5

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.||+.||++|..+.....   +
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~---~   78 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSS---G   78 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCC---C
Confidence            479999999999999999999999999999999997 478999999999999999999999999999875432110   0


Q ss_pred             CCCCccccCCCCcccccccc----cccCcccchhccccccc-----cccCCCCcEEEEEEEeeccccCcceeeeeceeec
Q 012891          161 DAEGFRYAGDAEGFRYAYQT----HFSDSFHKIFSEIFEDE-----TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~----~f~~~f~~~F~~~f~~~-----~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~  231 (454)
                      ...+|      .+|..+|..    .| .+|.++|+.+|++.     .+.+++|+++.|.|||+|+|+|+++++.+.+.+.
T Consensus        79 ~~~~~------~~~~~~~~~~~~~g~-~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~  151 (372)
T PRK14296         79 FSSNF------GDFEDLFSNMGSSGF-SSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTN  151 (372)
T ss_pred             cCcCC------Ccccccccccccccc-ccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeec
Confidence            00011      112211111    11 23556777777632     2346889999999999999999999999999999


Q ss_pred             ccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCc
Q 012891          232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG  303 (454)
Q Consensus       232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G  303 (454)
                      |+.|+|+|...+....+|+.|+|+|.++..        +.+.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||||
T Consensus       152 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G  231 (372)
T PRK14296        152 CSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKG  231 (372)
T ss_pred             cCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCC
Confidence            999999999988888999999999987532        135689999999999999999999999999999999999999


Q ss_pred             cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCccccc-CCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCC
Q 012891          304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRD-GADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQ  382 (454)
Q Consensus       304 ~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~-G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~  382 (454)
                      +++|++|+|+|+|++...++.+|||+|+|+++||+.|+|+ |+||+++++|+|.|||+|+++.|+||||+++|+||++++
T Consensus       232 ~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~t~  311 (372)
T PRK14296        232 IRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSIN  311 (372)
T ss_pred             CCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCCEEEEECCccC
Confidence            9999999999999987667789999999999999999995 899999999999999999999999999999999999999


Q ss_pred             CCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          383 PGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       383 ~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      +|++++|+|+|||.......+|||||+|+|+||+.||++|+++|++|+..+
T Consensus       312 ~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~~~~  362 (372)
T PRK14296        312 SNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYEQT  362 (372)
T ss_pred             CCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            999999999999965333457999999999999999999999999998753

>PRK14288 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.6e-80  Score=628.93  Aligned_cols=332  Identities=32%  Similarity=0.635  Sum_probs=290.7

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|++||+||+||.+|++||+||..+....   .+
T Consensus         2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~---~~   78 (369)
T PRK14288          2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQA---GA   78 (369)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccC---CC
Confidence            469999999999999999999999999999999998778899999999999999999999999999986543210   00


Q ss_pred             CCCCccccCCCCcccccccccccCcccchhcccccc-------ccccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~-------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~  233 (454)
                      +         ...|.++|+     .|.++|+++|++       ..+.+++|+++.|.|||+|+|+|+++++.+.+.+.|+
T Consensus        79 ~---------~~~~~~~f~-----~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~  144 (369)
T PRK14288         79 S---------QSDFSDFFE-----DLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCE  144 (369)
T ss_pred             C---------ccccccchh-----hHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCC
Confidence            0         011222221     233444444431       1134688999999999999999999999999999999


Q ss_pred             CCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCE
Q 012891          234 SCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT  309 (454)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~  309 (454)
                      .|+|+|.... ...+|+.|+|+|.+...    .+..+|+.|.|+|+++..+|..|.|.|++.+.++++|.||||+++|++
T Consensus       145 ~C~G~G~~~~-~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~  223 (369)
T PRK14288        145 SCDGTGAKDK-ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNR  223 (369)
T ss_pred             CCCCcccCCC-CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCE
Confidence            9999999875 57899999999987543    246799999999999999999999999999999999999999999999


Q ss_pred             EEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCCCCCcEEE
Q 012891          310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLV  388 (454)
Q Consensus       310 i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~~~g~~~~  388 (454)
                      |+|+|+|++.+ ++.+|||+|+|+|++|+.|+|+|+||+++++|+|.|||+|+++.|+||||+ ++|+||+++++|++++
T Consensus       224 i~l~g~G~~~~-~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~  302 (369)
T PRK14288        224 MVLKNKGNEYE-KGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFA  302 (369)
T ss_pred             EEEccCccCCC-CCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEE
Confidence            99999999864 578999999999999999999999999999999999999999999999997 7999999999999999


Q ss_pred             EcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891          389 LRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE  432 (454)
Q Consensus       389 l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~  432 (454)
                      |+|+|||..+. ..+|||||+|+|+||++|+++|+++|++|+..
T Consensus       303 i~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~  345 (369)
T PRK14288        303 FRNEGVKHPES-SYRGSLIVELQVIYPKSLNKEQQELLEKLHAS  345 (369)
T ss_pred             EcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99999997642 24799999999999999999999999999975

>PRK14279 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.9e-79  Score=627.78  Aligned_cols=352  Identities=36%  Similarity=0.680  Sum_probs=301.5

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCc-cc-
Q 012891           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENE-KY-  157 (454)
Q Consensus        80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~-~~-  157 (454)
                      +.+|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.||++||+||..+.... .. 
T Consensus         7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~   86 (392)
T PRK14279          7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGR   86 (392)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhccccccccc
Confidence            3579999999999999999999999999999999998888899999999999999999999999999975422110 00 


Q ss_pred             ---cCCCCCCccccC--CCCcccccccccc---cCcccchhccccccc-------cccCCCCcEEEEEEEeeccccCcce
Q 012891          158 ---SAGDAEGFRYAG--DAEGFRYAYQTHF---SDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTK  222 (454)
Q Consensus       158 ---~~~~~~~~~~~~--~~~~f~~~~~~~f---~~~f~~~F~~~f~~~-------~~~~g~di~~~l~itlee~~~G~~k  222 (454)
                         +.+++.+|.+..  ....|.++|+..+   ..+|.++|+.+|+++       .+.+++|+++.|.|||+|+|+|+++
T Consensus        87 ~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~~  166 (392)
T PRK14279         87 RFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTM  166 (392)
T ss_pred             cccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeEE
Confidence               001111221100  0122334443211   123567777777531       1346889999999999999999999


Q ss_pred             eeeeceeecccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEE
Q 012891          223 HVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKV  298 (454)
Q Consensus       223 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V  298 (454)
                      ++.+.+.+.|+.|+|+|........+|+.|+|+|.++..    .++.+|+.|+|+|++++.+|..|.|.|++.+.++++|
T Consensus       167 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~~~V  246 (392)
T PRK14279        167 PLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTINV  246 (392)
T ss_pred             EEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEeeeeEE
Confidence            999999999999999999988888999999999987643    2478999999999999999999999999999999999


Q ss_pred             EecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeC
Q 012891          299 TIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIP  378 (454)
Q Consensus       299 ~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip  378 (454)
                      .||||+++|++|+|+|+|++.+.+..+|||||+|+|+||+.|+|+|+||+++++|+|.+|++|++++|+||||+++|+||
T Consensus       247 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~v~Ip  326 (392)
T PRK14279        247 RIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVP  326 (392)
T ss_pred             EeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEEEEEC
Confidence            99999999999999999999877778899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          379 KGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       379 ~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      +++++|++++|+|+|||..+  ..+|||||+|+|+||+.||++|+++|++|+..+
T Consensus       327 ~g~~~g~~iri~g~G~p~~~--~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~~~  379 (392)
T PRK14279        327 AGTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAVPPNLDGAAAEALEAYAEAE  379 (392)
T ss_pred             CCCCCCCEEEECCCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            99999999999999999653  347999999999999999999999999999864

>PRK14286 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.1e-78  Score=618.73  Aligned_cols=341  Identities=34%  Similarity=0.694  Sum_probs=296.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|++||+||..+..... +..
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~-~~~   81 (372)
T PRK14286          3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGA-GGF   81 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhcccc-CCC
Confidence            4799999999999999999999999999999999987788999999999999999999999999999876543110 000


Q ss_pred             CCCCccccCCCCcccccccccccCcccchhccccccc-----------cccCCCCcEEEEEEEeeccccCcceeeeecee
Q 012891          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-----------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF  229 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~-----------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~  229 (454)
                      +..++      ..|..+|     ++|.++|+.+|++.           .+.+++|+++.|.|||+|+|+|+++++.+.+.
T Consensus        82 ~~~~~------~~~~~~~-----~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~  150 (372)
T PRK14286         82 GQGAY------TDFSDIF-----GDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRL  150 (372)
T ss_pred             CCCCc------ccccccc-----cchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeecc
Confidence            00000      0111111     13445666666421           13468899999999999999999999999999


Q ss_pred             ecccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccC
Q 012891          230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (454)
Q Consensus       230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~  305 (454)
                      +.|++|+|+|........+|+.|+|+|.+...    .+..+|+.|+|+|++++++|..|+|.|++.+.++++|.||||++
T Consensus       151 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~  230 (372)
T PRK14286        151 ESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVE  230 (372)
T ss_pred             ccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCC
Confidence            99999999999988888999999999987543    24779999999999999999999999999999999999999999


Q ss_pred             CCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCCCCC
Q 012891          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPG  384 (454)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~~~g  384 (454)
                      +|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|+|.+||+|+++.|+||||+ ++|+||+++++|
T Consensus       231 ~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g  310 (372)
T PRK14286        231 TGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESG  310 (372)
T ss_pred             CCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCC
Confidence            9999999999999876677899999999999999999999999999999999999999999999997 899999999999


Q ss_pred             cEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhc
Q 012891          385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEI  434 (454)
Q Consensus       385 ~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~~  434 (454)
                      ++++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|+..+.
T Consensus       311 ~~~ri~G~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~~~  359 (372)
T PRK14286        311 QVFRLKGHGMPYLGA-YGKGDQHVIVKIEIPKKITRRQRELIEEFARESG  359 (372)
T ss_pred             cEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHHhcC
Confidence            999999999997643 2479999999999999999999999999998753

>PRK14284 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.9e-78  Score=617.46  Aligned_cols=366  Identities=35%  Similarity=0.652  Sum_probs=303.0

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCC
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD  161 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~  161 (454)
                      .|||+||||+++||.+|||+|||+||++||||+|++++.|+++|++|++||+||+||.+|+.||++|..+......+. .
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~-~   79 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGF-G   79 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCc-C
Confidence            489999999999999999999999999999999998888999999999999999999999999999876532110000 0


Q ss_pred             CCCccc-cCCCCcccccccccccCcccchhcccccc-----------ccccCCCCcEEEEEEEeeccccCcceeeeecee
Q 012891          162 AEGFRY-AGDAEGFRYAYQTHFSDSFHKIFSEIFED-----------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF  229 (454)
Q Consensus       162 ~~~~~~-~~~~~~f~~~~~~~f~~~f~~~F~~~f~~-----------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~  229 (454)
                      ..+|.. ......|..+|+..|+ .+.++|+.+|++           ..+.++.|+++.|.|||+|+|+|+++++.+.+.
T Consensus        80 ~~g~~~~~~~~~~~~~~f~~~~~-~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~  158 (391)
T PRK14284         80 GAGMGNMEDALRTFMGAFGGEFG-GGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGY  158 (391)
T ss_pred             CCCcCcccchhhhcccccccccc-ccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeee
Confidence            011110 0011112222221111 123556655542           112467899999999999999999999999999


Q ss_pred             ecccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccC
Q 012891          230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (454)
Q Consensus       230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~  305 (454)
                      +.|+.|+|+|........+|+.|+|+|.+...    .++.+|+.|+|+|++++++|..|.|.|++.+.++++|.||||++
T Consensus       159 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~  238 (391)
T PRK14284        159 KSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVD  238 (391)
T ss_pred             ccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCCCC
Confidence            99999999999988888999999999987543    24679999999999999999999999999999999999999999


Q ss_pred             CCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCC--CEEEEEeCCCCCC
Q 012891          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLS--GKVQVKIPKGVQP  383 (454)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tld--G~~~v~ip~~~~~  383 (454)
                      +|++|+|+|+|++++.++.+|||||+|+++||+.|+|+|+||+++++|+|.+|++|++++|+|||  +.++|+||+++++
T Consensus       239 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~  318 (391)
T PRK14284        239 SGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQS  318 (391)
T ss_pred             CCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCC
Confidence            99999999999998878889999999999999999999999999999999999999999999999  5689999999999


Q ss_pred             CcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhccc---CCCCh-hh-hhhHHHh
Q 012891          384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINN---ENNTS-AE-ENWLYQQ  450 (454)
Q Consensus       384 g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~~~~---~~~~~-~~-~~~~~~~  450 (454)
                      |++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+..+..+   +...+ .+ .+||+.|
T Consensus       319 g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (391)
T PRK14284        319 GTILKVRGQGFPNVHG-KGRGDLLVRISVETPQNLSEEQKELLRQFAATEKAENFPKKRSFLDKIKGFFSDF  389 (391)
T ss_pred             CeEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHhhcccccCcccccHHHHHHHHHhhc
Confidence            9999999999997642 247999999999999999999999999998754211   11122 22 4588776

>PRK14277 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.2e-77  Score=614.13  Aligned_cols=347  Identities=41%  Similarity=0.769  Sum_probs=293.6

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|..+......+.+
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~   83 (386)
T PRK14277          4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQG   83 (386)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccccC
Confidence            46999999999999999999999999999999999877889999999999999999999999999998765432111110


Q ss_pred             CC--CCccccCCCCcccccccccccCcccchhccccccc------cccCCCCcEEEEEEEeeccccCcceeeeeceeecc
Q 012891          161 DA--EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC  232 (454)
Q Consensus       161 ~~--~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C  232 (454)
                      +.  .++.  .  ..|...+ ..|.+.|.++|+.+|++.      .+.+++|+++.|.|||+|+|+|+++++.+.+.+.|
T Consensus        84 ~~~~~g~~--~--~~~~~~~-~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C  158 (386)
T PRK14277         84 GFGQGGFG--G--GGFDFDF-GGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKC  158 (386)
T ss_pred             CcCCCCcc--c--cCccccc-cchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccC
Confidence            00  0110  0  0010000 011112233333333321      13468899999999999999999999999999999


Q ss_pred             cCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCcc
Q 012891          233 DSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV  304 (454)
Q Consensus       233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~  304 (454)
                      +.|+|+|........+|+.|+|.|.+...        ....+|+.|+|+|.+++++|..|+|.|++.+.++++|.||||+
T Consensus       159 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~  238 (386)
T PRK14277        159 DVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGI  238 (386)
T ss_pred             CCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCc
Confidence            99999999988888999999999987532        1256899999999999999999999999999999999999999


Q ss_pred             CCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCC
Q 012891          305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG  384 (454)
Q Consensus       305 ~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g  384 (454)
                      ++|++|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.|||+|+++.|+||||+++|+||+++++|
T Consensus       239 ~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g  318 (386)
T PRK14277        239 DDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTG  318 (386)
T ss_pred             cCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCCCCCC
Confidence            99999999999998766677899999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       385 ~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      ++++|+|+|||..+.. .+|||||+|+|+||+.||++|+++|++|+..+
T Consensus       319 ~~~ri~g~G~p~~~~~-~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~~~~  366 (386)
T PRK14277        319 TKFRLRGKGIPHLRGR-GRGDQIVKVYIEVPKKLTEKQKELLREFEKLS  366 (386)
T ss_pred             CEEEECCCCCCCCCCC-CCCCEEEEEEEEeCCCCCHHHHHHHHHHHhhc
Confidence            9999999999976432 47999999999999999999999999999754

>PRK14295 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3e-77  Score=610.93  Aligned_cols=350  Identities=36%  Similarity=0.701  Sum_probs=297.9

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcc----cccCCCCCc
Q 012891           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDR----RRSRGSENE  155 (454)
Q Consensus        80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~----~~~~g~~~~  155 (454)
                      +..|||+||||+++||.+|||+|||+||++||||+++.+++|+++|++|++||+||+||.+|++||+    ||..+....
T Consensus         7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~   86 (389)
T PRK14295          7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG   86 (389)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence            3579999999999999999999999999999999998777899999999999999999999999999    876554211


Q ss_pred             cccCCCCCCccccCCCCccccccc----ccccCcccchhcccccc----ccccCCCCcEEEEEEEeeccccCcceeeeec
Q 012891          156 KYSAGDAEGFRYAGDAEGFRYAYQ----THFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFD  227 (454)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~f~~~~~----~~f~~~f~~~F~~~f~~----~~~~~g~di~~~l~itlee~~~G~~k~v~~~  227 (454)
                      . +.++..+|.+ +..+.|..+++    ..|++.|.++|+.+|++    ..+.+++|+++.|.|||+|+|+|+++++.+.
T Consensus        87 ~-~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~  164 (389)
T PRK14295         87 P-GGGGGGGFNF-DLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLT  164 (389)
T ss_pred             C-CCCCCCCCCc-ccccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEee
Confidence            0 0000011110 00111211100    01222355667666653    1234688999999999999999999999999


Q ss_pred             eeecccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCc
Q 012891          228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG  303 (454)
Q Consensus       228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G  303 (454)
                      +.+.|++|.|+|...+....+|+.|+|+|.+...    .++.+|+.|+|+|.+++.+|..|.|.|++.+.++++|.||||
T Consensus       165 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G  244 (389)
T PRK14295        165 SQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAG  244 (389)
T ss_pred             ccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeCCC
Confidence            9999999999999988888999999999987543    246799999999999999999999999999999999999999


Q ss_pred             cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCC-EEEEEeCCCCC
Q 012891          304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQ  382 (454)
Q Consensus       304 ~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG-~~~v~ip~~~~  382 (454)
                      +++|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.+||+|++++|+|||| .++|+||++++
T Consensus       245 ~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~  324 (389)
T PRK14295        245 VSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTP  324 (389)
T ss_pred             CCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCccC
Confidence            99999999999999877677899999999999999999999999999999999999999999999999 58999999999


Q ss_pred             CCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          383 PGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       383 ~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      +|++++|+|+|||..+  ..+|||||+|+|.||+.||++|+++|++|+...
T Consensus       325 ~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~~~  373 (389)
T PRK14295        325 NGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPKDLSGKAREALEAFREAT  373 (389)
T ss_pred             CCcEEEECCCCcCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            9999999999999753  347999999999999999999999999999754

>PRK14298 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.6e-77  Score=610.68  Aligned_cols=335  Identities=41%  Similarity=0.723  Sum_probs=293.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|+.||++|..+.... +  +
T Consensus         4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~-~--~   79 (377)
T PRK14298          4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQ-Y--S   79 (377)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccc-c--C
Confidence            469999999999999999999999999999999997 47789999999999999999999999999986553211 0  0


Q ss_pred             CCCCccccCCCCcccccccccccCcccchhccccccc------cccCCCCcEEEEEEEeeccccCcceeeeeceeecccC
Q 012891          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS  234 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~  234 (454)
                      +..+|.  .  ..|         ++|.++|+.+|++.      .+.++.|+++.|.|||+|+|+|+++++.+.+.+.|+.
T Consensus        80 ~~~~~~--~--~~~---------~~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~  146 (377)
T PRK14298         80 AEDIFR--G--ADF---------GGFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCST  146 (377)
T ss_pred             cccccc--c--CCc---------CcchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCC
Confidence            000010  0  001         12345566666521      2357889999999999999999999999999999999


Q ss_pred             CCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCC
Q 012891          235 CHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS  306 (454)
Q Consensus       235 C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~  306 (454)
                      |+|+|...+....+|+.|+|+|.++..        .++.+|+.|+|+|++++++|..|.|.|++.+.++++|.||||+++
T Consensus       147 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~  226 (377)
T PRK14298        147 CSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADS  226 (377)
T ss_pred             CCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCC
Confidence            999999988888999999999987532        247799999999999999999999999999999999999999999


Q ss_pred             CCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcE
Q 012891          307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQL  386 (454)
Q Consensus       307 G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~  386 (454)
                      |++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.|||+|+++.|+||||++.|+||+++++|++
T Consensus       227 G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~  306 (377)
T PRK14298        227 GLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSV  306 (377)
T ss_pred             CCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCCE
Confidence            99999999999977778899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       387 ~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      ++|+|+|||..+. ..+|||||+|+|+||+.|+++|+++|++++..+
T Consensus       307 lri~g~G~p~~~~-~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~~~~  352 (377)
T PRK14298        307 FRLKDKGMPRLHG-HGKGDQLVKVIVKTPTKLTQEQKELLREFDELS  352 (377)
T ss_pred             EEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            9999999997642 247999999999999999999999999999753

>PRK14278 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.7e-77  Score=607.28  Aligned_cols=332  Identities=36%  Similarity=0.658  Sum_probs=289.9

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCC
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD  161 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~  161 (454)
                      .|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|+.||++|..+...   + +.
T Consensus         3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~---~-~~   77 (378)
T PRK14278          3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESA---G-GG   77 (378)
T ss_pred             CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccc---c-CC
Confidence            69999999999999999999999999999999998 5789999999999999999999999999997542210   0 00


Q ss_pred             CCCccccCCCCcccccccccccCcccchhccccccc--------cccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891          162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (454)
Q Consensus       162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~--------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~  233 (454)
                      ..+|.     .+|         ++|.++|+.+|++.        ...+++|+++.|.|||+|+|+|+++++.+.+.+.|+
T Consensus        78 ~~g~~-----~~f---------~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~  143 (378)
T PRK14278         78 GGGFG-----GGF---------GGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCD  143 (378)
T ss_pred             CCCCC-----cCc---------CchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCC
Confidence            00110     011         12334555555421        124688999999999999999999999999999999


Q ss_pred             CCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccC
Q 012891          234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (454)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~  305 (454)
                      .|+|+|...+....+|+.|+|+|.+...        ....+|+.|+|+|++++++|..|.|.|++.+.++++|.||||++
T Consensus       144 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~  223 (378)
T PRK14278        144 RCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVG  223 (378)
T ss_pred             CCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCC
Confidence            9999999988888999999999986532        12678999999999999999999999999999999999999999


Q ss_pred             CCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCC-CCEEEEEeCCCCCCC
Q 012891          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL-SGKVQVKIPKGVQPG  384 (454)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tl-dG~~~v~ip~~~~~g  384 (454)
                      +|++|+|+|+|++.+.+..+|||||+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|| ++.++|+||+++++|
T Consensus       224 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g  303 (378)
T PRK14278        224 DGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPG  303 (378)
T ss_pred             CCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCC
Confidence            9999999999999876778899999999999999999999999999999999999999999999 556899999999999


Q ss_pred             cEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       385 ~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      ++++|+|+|||..+. ..+|||||+|+|+||+.||++|+++|++|+..+
T Consensus       304 ~~lrl~g~G~p~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~~~  351 (378)
T PRK14278        304 SVITLRGRGMPHLRS-GGRGDLHAHVEVVVPTRLDHEDIELLRELKALR  351 (378)
T ss_pred             cEEEECCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Confidence            999999999997532 247999999999999999999999999999653

>PRK14276 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.8e-77  Score=609.40  Aligned_cols=339  Identities=40%  Similarity=0.699  Sum_probs=294.6

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCcccc-C
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS-A  159 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~-~  159 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|++||+||+.+..+...+ .
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~   81 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA   81 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCC
Confidence            469999999999999999999999999999999997 47789999999999999999999999999987654321000 0


Q ss_pred             CCCCCccccCCCCcccccccccccCcccchhccccccc-------cccCCCCcEEEEEEEeeccccCcceeeeeceeecc
Q 012891          160 GDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC  232 (454)
Q Consensus       160 ~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~-------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C  232 (454)
                      .++.+         |..  ...| ++|.++|+.+|++.       .+.+++|+.+.|.|||+|+|+|+++++.+.+.+.|
T Consensus        82 ~~~~~---------~~~--~~~~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C  149 (380)
T PRK14276         82 GGFGG---------FDG--SGGF-GGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATC  149 (380)
T ss_pred             CCCCC---------ccc--cccc-cchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccC
Confidence            00011         100  0011 12456677776521       13468899999999999999999999999999999


Q ss_pred             cCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCcc
Q 012891          233 DSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV  304 (454)
Q Consensus       233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~  304 (454)
                      +.|+|+|...+....+|+.|+|+|.+...        ..+.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||||+
T Consensus       150 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~  229 (380)
T PRK14276        150 HTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGV  229 (380)
T ss_pred             CCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCc
Confidence            99999999988888999999999987532        1367999999999999999999999999999999999999999


Q ss_pred             CCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCC
Q 012891          305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG  384 (454)
Q Consensus       305 ~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g  384 (454)
                      ++|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|+|.||++|++++|+|+||+++|+||+++++|
T Consensus       230 ~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g  309 (380)
T PRK14276        230 ETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTG  309 (380)
T ss_pred             cCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCC
Confidence            99999999999999866677899999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       385 ~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      ++++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|++.+
T Consensus       310 ~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~~~~  357 (380)
T PRK14276        310 KKFRLRGKGAPKLRG-GGNGDQHVTVNIVTPTKLNDAQKEALKAFAKAS  357 (380)
T ss_pred             CEEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            999999999997642 246999999999999999999999999999754

>PRK14285 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.6e-77  Score=604.68  Aligned_cols=343  Identities=35%  Similarity=0.660  Sum_probs=298.9

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||++|..+....    +
T Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~----~   77 (365)
T PRK14285          2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGG----G   77 (365)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccC----C
Confidence            369999999999999999999999999999999998878899999999999999999999999999987653211    0


Q ss_pred             CCCCccccCCCCcccccccccccCcccchhccccccc-------cccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~-------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~  233 (454)
                      +++++.  ++.++|...    | .+|.++|+.+|++.       .+.+++|+++.|.|||+|+|+|+++++.+++.+.|+
T Consensus        78 ~~~~~~--~g~~~~~~~----~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~  150 (365)
T PRK14285         78 GFEGFS--GGFSGFSDI----F-EDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCE  150 (365)
T ss_pred             CccccC--CCccccccc----c-ccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCC
Confidence            011110  000111111    1 23556777777631       134688999999999999999999999999999999


Q ss_pred             CCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCE
Q 012891          234 SCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT  309 (454)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~  309 (454)
                      .|+|+|...+.....|+.|+|+|+++..    .++.+|+.|+|+|.+++++|..|+|.|++.+.++++|.||||+++|++
T Consensus       151 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~  230 (365)
T PRK14285        151 SCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQ  230 (365)
T ss_pred             CCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCE
Confidence            9999999988888999999999987643    347899999999999999999999999999999999999999999999


Q ss_pred             EEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCCCCCcEEE
Q 012891          310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLV  388 (454)
Q Consensus       310 i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~~~g~~~~  388 (454)
                      |+|+|+|++.+.+..+|||||+|++++|+.|+|+|+||+++++|+|.|||+|++++|+||||+ ++|+||+++++|++++
T Consensus       231 i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~ir  310 (365)
T PRK14285        231 IKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQII  310 (365)
T ss_pred             EEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEE
Confidence            999999999876677899999999999999999999999999999999999999999999995 8999999999999999


Q ss_pred             EcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhcc
Q 012891          389 LRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEIN  435 (454)
Q Consensus       389 l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~~~  435 (454)
                      |+|+|||..+.. .+|||||+|+|++|+.|+++|+++|++|++....
T Consensus       311 l~GkG~p~~~~~-~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~~~~~  356 (365)
T PRK14285        311 IKNEGMPILHTE-KFGNLILIIKIKTPKNLNSNAIKLLENLSKELKD  356 (365)
T ss_pred             ECCCCccCCCCC-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHhcc
Confidence            999999976432 4699999999999999999999999999987643

>PRK14294 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.6e-77  Score=606.32  Aligned_cols=350  Identities=40%  Similarity=0.720  Sum_probs=303.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+++.+++|+++|++|++||+||+||.+|+.||+||+.+....     
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~-----   77 (366)
T PRK14294          3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGT-----   77 (366)
T ss_pred             CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCC-----
Confidence            479999999999999999999999999999999998778899999999999999999999999999987654311     


Q ss_pred             CCCCccccCCCCcccccccccccCcccchhccccc-c-c-------cccCCCCcEEEEEEEeeccccCcceeeeeceeec
Q 012891          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFE-D-E-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~-~-~-------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~  231 (454)
                      ++.++      .+|.++|     +.|.++|+++|+ + .       ...+++|+++.|.|||+|+|+|+++++.+.+.+.
T Consensus        78 ~~~~~------~~~~~~~-----~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~  146 (366)
T PRK14294         78 GFSGF------SGFDDIF-----SSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLET  146 (366)
T ss_pred             CCCCc------Cccccch-----hhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeeccc
Confidence            11111      0111111     123445555554 1 1       1346889999999999999999999999999999


Q ss_pred             ccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCC
Q 012891          232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG  307 (454)
Q Consensus       232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G  307 (454)
                      |+.|.|+|........+|+.|+|.|.+...    .++.+|+.|+|+|+++...|..|.|.|++.+.++++|.||||+++|
T Consensus       147 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G  226 (366)
T PRK14294        147 CEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTG  226 (366)
T ss_pred             CCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCC
Confidence            999999999988888999999999987532    2478999999999999999999999999999999999999999999


Q ss_pred             CEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEE
Q 012891          308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL  387 (454)
Q Consensus       308 ~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~  387 (454)
                      ++|+|+|+|++...++.+|||||+|+++||+.|+|+|+||++++.|+|.+||+|++++|+||||+++|+||+++++|+++
T Consensus       227 ~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~i  306 (366)
T PRK14294        227 SRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIF  306 (366)
T ss_pred             cEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEE
Confidence            99999999998777788999999999999999999999999999999999999999999999999899999999999999


Q ss_pred             EEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhcccCCCChhhhhhHHH
Q 012891          388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWLYQ  449 (454)
Q Consensus       388 ~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~~~~~~~~~~~~~~~~~  449 (454)
                      +|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+..+.  +....+..+||..
T Consensus       307 ri~G~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~~~--~~~~~~~~~~~~~  365 (366)
T PRK14294        307 RFKGKGIPSLRG-GGRGDQIIEVEVKVPTRLTKKQEELLTEFARLES--EKIGNKLRNLFKS  365 (366)
T ss_pred             EECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhcc--ccHHHHHHHHhhc
Confidence            999999997643 2479999999999999999999999999998653  2334567888863

>PRK14301 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.6e-77  Score=605.79  Aligned_cols=352  Identities=41%  Similarity=0.736  Sum_probs=301.9

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||++|||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|..+..+.    +
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~----~   78 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGN----G   78 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccC----C
Confidence            479999999999999999999999999999999998778899999999999999999999999999987654211    1


Q ss_pred             CCCCccccCCCCcccccccccccCcccchhcccccc--------ccccCCCCcEEEEEEEeeccccCcceeeeeceeecc
Q 012891          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC  232 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~--------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C  232 (454)
                      ++++|.  +..++|         +.|.++|+.+|+.        ..+.+++|+++.|.|||+|+|+|+++++.+.+.+.|
T Consensus        79 ~~~g~~--~~~~~~---------~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C  147 (373)
T PRK14301         79 GFGGFS--SAEDIF---------SHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTC  147 (373)
T ss_pred             CCCCcc--cccccc---------cchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccC
Confidence            111111  001111         1233445544431        123468899999999999999999999999999999


Q ss_pred             cCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCC
Q 012891          233 DSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD  308 (454)
Q Consensus       233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~  308 (454)
                      +.|+|+|........+|+.|+|+|.+...    ..+.+|+.|+|+|+++...|..|+|.|++.+.++++|.||||+++|+
T Consensus       148 ~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~  227 (373)
T PRK14301        148 DDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGS  227 (373)
T ss_pred             CCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCC
Confidence            99999999988888999999999987543    24789999999999999999999999999999999999999999999


Q ss_pred             EEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEE
Q 012891          309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLV  388 (454)
Q Consensus       309 ~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~  388 (454)
                      +|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.+||+|++++|+||||+++|+||+++++|++++
T Consensus       228 ~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v~ip~g~~~g~~~r  307 (373)
T PRK14301        228 RLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFR  307 (373)
T ss_pred             EEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEEEECCCcCCCcEEE
Confidence            99999999987767789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhcccCCCChhhhhhHHHh
Q 012891          389 LRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWLYQQ  450 (454)
Q Consensus       389 l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~  450 (454)
                      |+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|+..+..  +-.-+--.||..+
T Consensus       308 i~g~G~p~~~~-~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~~~~~~--~~~~~~~~~~~~~  366 (373)
T PRK14301        308 LRGKGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLREFEALEEE--KPLEKVKKFFKKI  366 (373)
T ss_pred             EcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhccc--CHHHHHHHHHHHH
Confidence            99999997643 24799999999999999999999999999976421  1123345677665

>PRK14297 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=9e-77  Score=607.00  Aligned_cols=340  Identities=39%  Similarity=0.736  Sum_probs=295.3

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+++.+++|+++|++|++||+||+||.+|++||++|..+.....  ..
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~--~~   80 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAG--GF   80 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccC--CC
Confidence            4699999999999999999999999999999999987788999999999999999999999999999876543110  00


Q ss_pred             CCCCccccCCCCcccccccccccCcccchhcccccc---------ccccCCCCcEEEEEEEeeccccCcceeeeeceeec
Q 012891          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~---------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~  231 (454)
                      +.++|.      .|. +  ..+ .+|.++|+.+|++         ..+.+++|+++.|.|||+|+|+|+++++.+.+.+.
T Consensus        81 ~~~~~~------~~~-~--~~~-~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~  150 (380)
T PRK14297         81 GSGGFG------GFD-F--SDM-GGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNEN  150 (380)
T ss_pred             CCCCCC------CcC-c--ccc-cchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeecc
Confidence            000110      010 0  000 1244556655542         11346889999999999999999999999999999


Q ss_pred             ccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCc
Q 012891          232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG  303 (454)
Q Consensus       232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G  303 (454)
                      |+.|.|+|...+....+|+.|+|+|.+...        ..+.+|+.|+|+|.+++++|..|+|.|++.+.++++|.||||
T Consensus       151 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G  230 (380)
T PRK14297        151 CETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAG  230 (380)
T ss_pred             CCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCC
Confidence            999999999988888999999999987532        247799999999999999999999999999999999999999


Q ss_pred             cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCC
Q 012891          304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQP  383 (454)
Q Consensus       304 ~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~  383 (454)
                      +++|++|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.|||+|++++|+|+||+++|+||+++++
T Consensus       231 ~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~  310 (380)
T PRK14297        231 VDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQP  310 (380)
T ss_pred             CCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCC
Confidence            99999999999999876677899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       384 g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      |++++|+|+|||..+. ..+|||||+|+|+||+.||++|+++|++|+..+
T Consensus       311 g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~~  359 (380)
T PRK14297        311 GTVFRLKGKGVPRVNS-TGRGNQYVTVIVDIPKKLNSKQKEALTMFMEAS  359 (380)
T ss_pred             CCEEEEcCCCcCCCCC-CCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHhc
Confidence            9999999999997532 247999999999999999999999999999865

>PRK14287 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.9e-77  Score=604.80  Aligned_cols=332  Identities=40%  Similarity=0.740  Sum_probs=291.5

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|++||+||..+..... +.+
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~-~~~   80 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGF-GGG   80 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccccccc-CCC
Confidence            469999999999999999999999999999999997 478899999999999999999999999999876542110 000


Q ss_pred             CCCCccccCCCCcccccccccccCcccchhcccccc-------ccccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~-------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~  233 (454)
                      ++         ..|.         +|.++|+.+|++       ..+.+++|+++.|.|||+|+|.|+++++.+.+.+.|+
T Consensus        81 ~~---------~~f~---------~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~  142 (371)
T PRK14287         81 GA---------GDFG---------GFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCG  142 (371)
T ss_pred             CC---------cccc---------chHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCC
Confidence            00         0110         123445555542       1134688999999999999999999999999999999


Q ss_pred             CCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccC
Q 012891          234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (454)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~  305 (454)
                      .|+|+|........+|+.|+|+|.+...        ..+.+|+.|.|+|.+++++|..|.|.|++.+.++++|.||||++
T Consensus       143 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~  222 (371)
T PRK14287        143 TCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGID  222 (371)
T ss_pred             CCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCC
Confidence            9999999988888999999999987532        13679999999999999999999999999999999999999999


Q ss_pred             CCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCc
Q 012891          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ  385 (454)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~  385 (454)
                      +|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||++++.|+|.+|++|++++|+|+||+++|+||+++++|+
T Consensus       223 ~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~  302 (371)
T PRK14287        223 HGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGT  302 (371)
T ss_pred             CCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCc
Confidence            99999999999997666789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       386 ~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      +++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|++.+
T Consensus       303 ~~ri~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~~  349 (371)
T PRK14287        303 SFRLRGKGVPNVHG-RGQGDQHVQVRVVTPKNLTEKEKELMREFAGMS  349 (371)
T ss_pred             EEEEcCCCccCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhhh
Confidence            99999999997642 247999999999999999999999999999764

>PRK14280 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.1e-76  Score=605.28  Aligned_cols=337  Identities=43%  Similarity=0.765  Sum_probs=293.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||+||+||.+|++||+||+.+..... +. 
T Consensus         3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~-~~-   79 (376)
T PRK14280          3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGF-GG-   79 (376)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCc-CC-
Confidence            369999999999999999999999999999999997 467899999999999999999999999999876543110 00 


Q ss_pred             CCCCccccCCCCcccccccccccCcccchhccccccc-------cccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~-------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~  233 (454)
                        .++.    +.+|..    .|  +|.++|+.+|++.       .+.+++|+.+.|.|||+|+|+|+++++.+.+.+.|+
T Consensus        80 --~~~~----~~~~~~----~~--~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~  147 (376)
T PRK14280         80 --GGFG----GGDFGG----GF--GFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCD  147 (376)
T ss_pred             --CCCC----CCCccc----cc--cchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCC
Confidence              0000    001110    01  2345566666421       124688999999999999999999999999999999


Q ss_pred             CCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccC
Q 012891          234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (454)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~  305 (454)
                      .|+|+|...+....+|+.|+|+|.+...        ..+.+|+.|+|+|.+++.+|..|+|.|++.+.++++|.||||++
T Consensus       148 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~  227 (376)
T PRK14280        148 TCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVD  227 (376)
T ss_pred             CCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCc
Confidence            9999999988888999999999987532        13678999999999999999999999999999999999999999


Q ss_pred             CCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCc
Q 012891          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ  385 (454)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~  385 (454)
                      +|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||++++.|+|.|||+|+++.|+||||++.|+||+++++|+
T Consensus       228 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~  307 (376)
T PRK14280        228 NGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGT  307 (376)
T ss_pred             CCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCc
Confidence            99999999999997767788999999999999999999999999999999999999999999999998999999999999


Q ss_pred             EEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       386 ~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      +++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|+..+
T Consensus       308 ~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~~~~  354 (376)
T PRK14280        308 QFRLKGKGVPNVRG-YGQGDQYVVVRVVTPTKLTDRQKELLREFAELS  354 (376)
T ss_pred             EEEEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            99999999997632 247999999999999999999999999998753

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=100.00  E-value=5.7e-77  Score=611.25  Aligned_cols=326  Identities=30%  Similarity=0.533  Sum_probs=283.7

Q ss_pred             CCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCc
Q 012891           76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENE  155 (454)
Q Consensus        76 ~~~~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~  155 (454)
                      +..+...|||+||||+++||.+|||+|||+||++||||+|++    .++|++|++||+||+||.+|+.||++|..+..+.
T Consensus        22 ~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~   97 (421)
T PTZ00037         22 KREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGG   97 (421)
T ss_pred             cccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccC
Confidence            344556899999999999999999999999999999999862    4899999999999999999999999976543210


Q ss_pred             cccCCCCCCccccCCCCcccccccccccCcccchhcccccc----ccccCCCCcEEEEEEEeeccccCcceeeeeceeec
Q 012891          156 KYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP  231 (454)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~----~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~  231 (454)
                          .        ++.             ++.++|+.+|++    ....+++|+.+.|.|||+|+|+|+++++.+.+.+.
T Consensus        98 ----~--------~~~-------------d~~d~f~~~Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~  152 (421)
T PTZ00037         98 ----E--------QPA-------------DASDLFDLIFGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVI  152 (421)
T ss_pred             ----C--------CCc-------------chhhhHHHhhccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeecccc
Confidence                0        000             112333434432    12356899999999999999999999999999999


Q ss_pred             ccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEee--eecccccCCceeeceEEEEEEec
Q 012891          232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIP  301 (454)
Q Consensus       232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~--~~C~~C~g~G~~~~~~~~~V~Ip  301 (454)
                      |+.|+|+|.... ...+|+.|+|+|.++..        .++.+|+.|+|+|+++.  ++|..|+|.|++.+.++++|.||
T Consensus       153 C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip  231 (421)
T PTZ00037        153 CANCEGHGGPKD-AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNID  231 (421)
T ss_pred             ccccCCCCCCCC-CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeC
Confidence            999999998644 57899999999975321        24679999999999985  89999999999999999999999


Q ss_pred             CccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCC
Q 012891          302 AGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG  380 (454)
Q Consensus       302 ~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~  380 (454)
                      ||+.+|++|+|+|+|++.+ ++.||||||+|+++||+.|+|+|+||+++++|+|.+||+|+++.|+||||+ +.|+||++
T Consensus       232 ~G~~dG~~I~~~G~Gd~~~-~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g  310 (421)
T PTZ00037        232 KGVPNQHKITFHGEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPG  310 (421)
T ss_pred             CCCCCCcEEEEecccCCCC-CCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCC
Confidence            9999999999999999965 678999999999999999999999999999999999999999999999997 79999988


Q ss_pred             --CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC--CCCCHHHHHHHHHHHHH
Q 012891          381 --VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP--TALNERQRAILEEFAEE  432 (454)
Q Consensus       381 --~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P--~~ls~~q~~~l~~~~~~  432 (454)
                        ++||++++|+|+|||..+.+..+|||||+|+|+||  +.||++|+++|++|+..
T Consensus       311 ~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~~  366 (421)
T PTZ00037        311 EVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQ  366 (421)
T ss_pred             cccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhccC
Confidence              99999999999999976443458999999999999  99999999999999864

>PRK10767 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.8e-76  Score=601.31  Aligned_cols=336  Identities=45%  Similarity=0.838  Sum_probs=294.3

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||++|..+..... +  
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~--   79 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGG-G--   79 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCC-C--
Confidence            4699999999999999999999999999999999987788999999999999999999999999999765543110 0  


Q ss_pred             CCCCccccCCCCcccccccccccCcccchhcccccc------ccccCCCCcEEEEEEEeeccccCcceeeeeceeecccC
Q 012891          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS  234 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~  234 (454)
                       ..+|.   +..+|        ++.|.++|+.+|++      ..+.+++|+++.|.|||+|+|+|+++++.+.+.+.|+.
T Consensus        80 -~~~~~---~~~~~--------~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~  147 (371)
T PRK10767         80 -GGGFG---GGGGF--------GDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDT  147 (371)
T ss_pred             -CCCCC---Ccccc--------ccchhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCC
Confidence             01110   00011        12234455555542      12357899999999999999999999999999999999


Q ss_pred             CCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCEE
Q 012891          235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI  310 (454)
Q Consensus       235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i  310 (454)
                      |.|+|.........|+.|+|+|.+...    .++.+|+.|+|+|++++++|..|.|.|++.+.++++|.||||+++|++|
T Consensus       148 C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i  227 (371)
T PRK10767        148 CHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRI  227 (371)
T ss_pred             CCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEE
Confidence            999999988888899999999987532    2467999999999999999999999999999999999999999999999


Q ss_pred             EECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEEEc
Q 012891          311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLR  390 (454)
Q Consensus       311 ~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~l~  390 (454)
                      +|+|+|++...+..+|||||+|+++||+.|+|+|+||++++.|+|.+||+|++++|+||||.++|+||+++++|++++|+
T Consensus       228 ~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~  307 (371)
T PRK10767        228 RLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLR  307 (371)
T ss_pred             EEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEEEeCCCCCCCCEEEEC
Confidence            99999999766778999999999999999999999999999999999999999999999999899999999999999999


Q ss_pred             CCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891          391 GKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE  432 (454)
Q Consensus       391 g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~  432 (454)
                      |+|||..+. ..+|||||+|+|.||+.|+++|+++|+++++.
T Consensus       308 g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~~  348 (371)
T PRK10767        308 GKGVKSVRS-GARGDLYCQVVVETPVNLTKRQKELLEEFEES  348 (371)
T ss_pred             CCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            999997532 24799999999999999999999999999974

>PRK14282 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.3e-76  Score=598.13  Aligned_cols=343  Identities=36%  Similarity=0.680  Sum_probs=294.0

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA  159 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~  159 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|+.||++|..+......+.
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~   82 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET   82 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence            47999999999999999999999999999999999764 67899999999999999999999999999865543110000


Q ss_pred             CCCCCccccCCCCcccccccccccCcc-cchhccccccc--------cccCCCCcEEEEEEEeeccccCcceeeeeceee
Q 012891          160 GDAEGFRYAGDAEGFRYAYQTHFSDSF-HKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV  230 (454)
Q Consensus       160 ~~~~~~~~~~~~~~f~~~~~~~f~~~f-~~~F~~~f~~~--------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~  230 (454)
                      +..++|        |.++|.. |++.| .++|+.+|++.        .+.+++|+++.|.|||+|+|+|+++++.+.+.+
T Consensus        83 ~~~g~~--------~~~~~~~-~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~  153 (369)
T PRK14282         83 ESGGGF--------FEDIFKD-FENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYE  153 (369)
T ss_pred             CCCCcc--------ccccccc-ccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecc
Confidence            000011        1111111 11111 24566666521        134688999999999999999999999999999


Q ss_pred             cccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecC
Q 012891          231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPA  302 (454)
Q Consensus       231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~  302 (454)
                      .|+.|+|+|...+....+|+.|+|+|.+...        ..+.+|+.|+|+|++++++|..|.|.|++.+.++++|.|||
T Consensus       154 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~  233 (369)
T PRK14282        154 TCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPA  233 (369)
T ss_pred             cCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCC
Confidence            9999999999988888999999999987532        13679999999999999999999999999999999999999


Q ss_pred             ccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCC
Q 012891          303 GVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGV  381 (454)
Q Consensus       303 G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~  381 (454)
                      |+++|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.||++|++++|+|+||+ ++|+||+++
T Consensus       234 G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~  313 (369)
T PRK14282        234 GVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGT  313 (369)
T ss_pred             CCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCc
Confidence            9999999999999999777788999999999999999999999999999999999999999999999996 799999999


Q ss_pred             CCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          382 QPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       382 ~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      ++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+.+|+++|++|++.+
T Consensus       314 ~~g~~iri~GkG~p~~~~-~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~~~  364 (369)
T PRK14282        314 QPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIPKRLSREERKLLKELAKKR  364 (369)
T ss_pred             CCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhc
Confidence            999999999999996522 247999999999999999999999999998754

>PRK14281 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.4e-76  Score=603.64  Aligned_cols=349  Identities=36%  Similarity=0.664  Sum_probs=289.9

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||+||||+++|+.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|..+....... +
T Consensus         2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~-~   80 (397)
T PRK14281          2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAAS-G   80 (397)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhcccccc-C
Confidence            369999999999999999999999999999999998778899999999999999999999999999987654321000 0


Q ss_pred             CCCCcccc--CCCCcc---ccccccc--ccCcccchhccccccc-------cccCCCCcEEEEEEEeeccccCcceeeee
Q 012891          161 DAEGFRYA--GDAEGF---RYAYQTH--FSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSF  226 (454)
Q Consensus       161 ~~~~~~~~--~~~~~f---~~~~~~~--f~~~f~~~F~~~f~~~-------~~~~g~di~~~l~itlee~~~G~~k~v~~  226 (454)
                      ...+|...  +..+.|   ..||+..  ++.....-|...|++.       .+.+++|+++.|.|||+|+|+|+++++.+
T Consensus        81 ~~~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~  160 (397)
T PRK14281         81 GGPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKI  160 (397)
T ss_pred             CCCCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEE
Confidence            00111000  001112   1223210  0000000011111111       12368899999999999999999999999


Q ss_pred             ceeecccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEE
Q 012891          227 DAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKV  298 (454)
Q Consensus       227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V  298 (454)
                      ++.+.|+.|.|+|...+ ...+|+.|+|.|.++..        ..+.+|+.|+|+|.+++++|..|.|.|++...++++|
T Consensus       161 ~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V  239 (397)
T PRK14281        161 KKQVPCKECNGTGSKTG-ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKV  239 (397)
T ss_pred             EeeecCCCCCCcccCCC-CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEE
Confidence            99999999999999876 57899999999987542        1266899999999999999999999999999999999


Q ss_pred             EecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeC
Q 012891          299 TIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIP  378 (454)
Q Consensus       299 ~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip  378 (454)
                      .||||+++|++|+|+|+|++.+.+..+|||||+|++++|+.|+|+|+||+++++|+|.|||+|++++|+||||+++|+||
T Consensus       240 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip  319 (397)
T PRK14281        240 TVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIP  319 (397)
T ss_pred             ecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeC
Confidence            99999999999999999999876778999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891          379 KGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE  432 (454)
Q Consensus       379 ~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~  432 (454)
                      +++++|++++|+|+|||.... ..+|||||+|+|+||+.||++|+++|++|+..
T Consensus       320 ~g~~~G~~~ri~g~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~  372 (397)
T PRK14281        320 AGTQPETMLRIPGKGIGHLRG-SGRGDQYVRVNVFVPKEVSHQDKELLKELKKS  372 (397)
T ss_pred             CccCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhh
Confidence            999999999999999997532 25799999999999999999999999999874

>PRK14300 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.3e-74  Score=589.15  Aligned_cols=339  Identities=38%  Similarity=0.718  Sum_probs=291.3

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCC
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD  161 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~  161 (454)
                      .|||+||||+++||.+|||+|||+||++||||+++ ++.++++|++|++||+||+||.+|+.||++|..+..... ..++
T Consensus         3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~-~~~~   80 (372)
T PRK14300          3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQ-SRGG   80 (372)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccccccc-ccCC
Confidence            69999999999999999999999999999999997 467889999999999999999999999999865543110 0000


Q ss_pred             CCCccccCCCCcccccccccccCcccchhccccccc-------cccCCCCcEEEEEEEeeccccCcceeeeeceeecccC
Q 012891          162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS  234 (454)
Q Consensus       162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~-------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~  234 (454)
                      .+++      ..|.    ..|++.|.++|+.+|++.       .+.+++|+++.|.|||+|+|+|+++++.+.+.+.|+.
T Consensus        81 ~g~~------~~~~----~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~  150 (372)
T PRK14300         81 GGNH------GGFH----PDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDT  150 (372)
T ss_pred             CCCC------Cccc----cchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCC
Confidence            0000      0010    001122334444433321       1146889999999999999999999999999999999


Q ss_pred             CCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCEE
Q 012891          235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI  310 (454)
Q Consensus       235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i  310 (454)
                      |.|+|...+....+|+.|+|+|.+...    .+..+|+.|+|+|+++.++|..|+|.|++.+.++++|.||||+++|++|
T Consensus       151 C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i  230 (372)
T PRK14300        151 CHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRI  230 (372)
T ss_pred             CCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEE
Confidence            999999988888999999999987543    2467999999999999999999999999999999999999999999999


Q ss_pred             EECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCC-EEEEEeCCCCCCCcEEEE
Q 012891          311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVL  389 (454)
Q Consensus       311 ~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG-~~~v~ip~~~~~g~~~~l  389 (454)
                      +|+|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|||| .++|+||+++++|++++|
T Consensus       231 ~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri  310 (372)
T PRK14300        231 RHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRL  310 (372)
T ss_pred             EEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEE
Confidence            9999999876678899999999999999999999999999999999999999999999998 589999999999999999


Q ss_pred             cCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          390 RGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       390 ~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      +|+|||..+. ..+|||||+|+|+||++||++|+++|++|++..
T Consensus       311 ~g~G~p~~~~-~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~~~  353 (372)
T PRK14300        311 RSKGMSKMRS-TIRGDMLTHIHVEVPKNLSKRQRELLEEFKKES  353 (372)
T ss_pred             CCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            9999997532 247999999999999999999999999999753

>PRK14291 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.3e-74  Score=587.25  Aligned_cols=347  Identities=37%  Similarity=0.691  Sum_probs=289.9

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|++||++|..+.........
T Consensus         2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~   80 (382)
T PRK14291          2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ   80 (382)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence            4699999999999999999999999999999999985 778999999999999999999999999998765432110000


Q ss_pred             CCCCcc---ccCCCCcccccccccccCcccchhccccc--c-----ccccCCCCcEEEEEEEeeccccCcceeeeeceee
Q 012891          161 DAEGFR---YAGDAEGFRYAYQTHFSDSFHKIFSEIFE--D-----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV  230 (454)
Q Consensus       161 ~~~~~~---~~~~~~~f~~~~~~~f~~~f~~~F~~~f~--~-----~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~  230 (454)
                      ...+|.   ..+..+.|.+||+. |+  |..+|....+  .     ..+.+++|+.+.|.|||+|+|+|+++++.+.+.+
T Consensus        81 ~~~~~~~~~~~~~~d~f~~~f~~-fg--~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~  157 (382)
T PRK14291         81 GQEGFSDFGGGNIEDILEDVFDI-FG--FGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYV  157 (382)
T ss_pred             cccccccccCCCHHHHHHHHHHh-cc--ccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeec
Confidence            001111   00011222222211 10  1111211000  0     1133688999999999999999999999999999


Q ss_pred             cccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCC
Q 012891          231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS  306 (454)
Q Consensus       231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~  306 (454)
                      .|..|+|+|...+....+|+.|+|+|.++..    .++.+|+.|+|+|. ++++|..|+|.|++.+.++++|.||||+++
T Consensus       158 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~-~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~  236 (382)
T PRK14291        158 PCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGV-LREPCSKCNGRGLVIKKETIKVRIPPGVDN  236 (382)
T ss_pred             cCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceE-EccCCCCCCCCceEEeeeEEEEEeCCCCCC
Confidence            9999999999988888999999999987543    24779999999994 789999999999999999999999999999


Q ss_pred             CCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCCCCCc
Q 012891          307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQ  385 (454)
Q Consensus       307 G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~~~g~  385 (454)
                      |++|+|+|+|+++..++.+|||||+|+++||+.|+|+|+||++++.|+|.||++|+++.|+|+||+ ++|+||+++++|+
T Consensus       237 G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~  316 (382)
T PRK14291        237 GSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGD  316 (382)
T ss_pred             CCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCC
Confidence            999999999999877888999999999999999999999999999999999999999999999996 7999999999999


Q ss_pred             EEEEcCCCcCCCCCCCCCCcEEEEEEEECCC--CCC------HHHHHHHHHHHHHh
Q 012891          386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT--ALN------ERQRAILEEFAEEE  433 (454)
Q Consensus       386 ~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~--~ls------~~q~~~l~~~~~~~  433 (454)
                      +++|+|+|||..+. ..+|||||+|+|+||+  .||      ++|+++|++|....
T Consensus       317 ~i~i~G~G~p~~~~-~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~~~~  371 (382)
T PRK14291        317 KIRVPGKGMPRLKG-SGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELDKLL  371 (382)
T ss_pred             EEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHHhhc
Confidence            99999999997643 2479999999999998  599      99999999998765

>PRK14283 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.6e-74  Score=585.52  Aligned_cols=342  Identities=38%  Similarity=0.679  Sum_probs=292.9

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccC
Q 012891           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA  159 (454)
Q Consensus        80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~  159 (454)
                      ...|||++|||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|++||++|+.|....  +.
T Consensus         3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~--~~   79 (378)
T PRK14283          3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGF--SQ   79 (378)
T ss_pred             CcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccc--cc
Confidence            35799999999999999999999999999999999984 7899999999999999999999999999987654310  00


Q ss_pred             CCCCCccccCCCCcccccccccccCcccchhccc-ccc---ccccCCCCcEEEEEEEeeccccCcceeeeeceeecccCC
Q 012891          160 GDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI-FED---ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC  235 (454)
Q Consensus       160 ~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~-f~~---~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C  235 (454)
                      .  +.|...+..+.|..|+     .+|.++|+.+ |++   ..+.++.|++++|.|||+|+|+|+++++.+.+.+.|+.|
T Consensus        80 ~--~~~~~~~~~~~~~~~~-----~~~~~~f~~~~fgg~~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C  152 (378)
T PRK14283         80 E--DIFNNINFEDIFQGFG-----FGIGNIFDMFGFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVC  152 (378)
T ss_pred             c--ccccccCccccccccc-----cchhhhccccccCCCCCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCC
Confidence            0  0011000011111111     1233444443 432   123478899999999999999999999999999999999


Q ss_pred             CCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCC
Q 012891          236 HGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG  307 (454)
Q Consensus       236 ~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G  307 (454)
                      .|+|...+.....|+.|+|.|.+...        ....+|+.|.|+|+.++++|..|.|.|++.+.++++|.||||+++|
T Consensus       153 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G  232 (378)
T PRK14283        153 NGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETG  232 (378)
T ss_pred             CccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCC
Confidence            99999888888999999999987532        1267899999999999999999999999999999999999999999


Q ss_pred             CEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEE
Q 012891          308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL  387 (454)
Q Consensus       308 ~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~  387 (454)
                      ++++|+|+|++...+..+|||||+|+|++|+.|+|+|+||++++.|+|.+|++|++++|+||||.+.|.||+++++|+++
T Consensus       233 ~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~  312 (378)
T PRK14283        233 SRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTF  312 (378)
T ss_pred             cEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEE
Confidence            99999999998766678999999999999999999999999999999999999999999999998899999999999999


Q ss_pred             EEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891          388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE  432 (454)
Q Consensus       388 ~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~  432 (454)
                      +|+|+|||..+. ..+|||||+|+|+||+.||++|+++|++|++.
T Consensus       313 ri~g~G~p~~~~-~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~~~  356 (378)
T PRK14283        313 RLKGHGMPSLRW-SGKGNLYVKVKVVVPKKLSPKQKELLREFASI  356 (378)
T ss_pred             EECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHHhh
Confidence            999999997532 24799999999999999999999999999864

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=100.00  E-value=1.1e-73  Score=580.45  Aligned_cols=336  Identities=44%  Similarity=0.788  Sum_probs=291.2

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCCC
Q 012891           83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDA  162 (454)
Q Consensus        83 ~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~~  162 (454)
                      |||+||||+++|+.+|||+|||+||++||||+++ +++++++|++|++||+||+||.+|+.||++|..+......+  ..
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~--~~   77 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGG--GG   77 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcC--CC
Confidence            7999999999999999999999999999999997 57788999999999999999999999999987654321100  00


Q ss_pred             CCccccCCCCcccccccccccCcccchhcccccc---------ccccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891          163 EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (454)
Q Consensus       163 ~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~---------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~  233 (454)
                      .+|.      +|   ....| ++|.++|+.+|++         ....+++|+++.|.|||+|+|+|+++++.+++.+.|+
T Consensus        78 ~~~~------~~---~~~~~-~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~  147 (354)
T TIGR02349        78 GGFN------GF---DIGFF-GDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCE  147 (354)
T ss_pred             CCcC------Cc---cccCc-CchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCC
Confidence            0110      00   00011 1244556665552         1234688999999999999999999999999999999


Q ss_pred             CCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccC
Q 012891          234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (454)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~  305 (454)
                      .|+|+|.........|+.|+|+|.+...        ..+.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||||++
T Consensus       148 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~  227 (354)
T TIGR02349       148 TCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVD  227 (354)
T ss_pred             CCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCC
Confidence            9999999888888999999999987532        12669999999999999999999999999999999999999999


Q ss_pred             CCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCc
Q 012891          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ  385 (454)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~  385 (454)
                      +|++|+|+|+|++...+..+|||||+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+||||.++|.||+++++|+
T Consensus       228 ~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~  307 (354)
T TIGR02349       228 TGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGT  307 (354)
T ss_pred             CCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCc
Confidence            99999999999987667789999999999999999999999999999999999999999999999998999999999999


Q ss_pred             EEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891          386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE  432 (454)
Q Consensus       386 ~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~  432 (454)
                      +++|+|+|||..+. ..+|||||+|+|+||+.|+++|+++|++++..
T Consensus       308 ~~~i~g~G~p~~~~-~~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~~  353 (354)
T TIGR02349       308 VFRLKGKGVPRLRG-NGRGDLLVTVKVETPKNLSKEQKELLEELAEA  353 (354)
T ss_pred             EEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99999999997643 25799999999999999999999999999853

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14290 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.9e-73  Score=579.70  Aligned_cols=347  Identities=35%  Similarity=0.646  Sum_probs=288.1

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      .|||+||||+++||.+|||+|||+||++||||+++.++ +|+++|++|++||+||+||.+|++||++|..+...   +++
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~---~~~   79 (365)
T PRK14290          3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGA---GGS   79 (365)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCccccc---CCC
Confidence            69999999999999999999999999999999998664 78999999999999999999999999998765421   000


Q ss_pred             CC--CCcc-ccCCCCcccccccccccCcccchhccc-cccccccCCCCcEEEEEEEeeccccCcceeeeeceeecccCCC
Q 012891          161 DA--EGFR-YAGDAEGFRYAYQTHFSDSFHKIFSEI-FEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCH  236 (454)
Q Consensus       161 ~~--~~~~-~~~~~~~f~~~~~~~f~~~f~~~F~~~-f~~~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~  236 (454)
                      .+  ++|. +.+..+.|..||+..|+.   +.|+.. .......+++|+++.|.|||+|+|.|+++++.+.+.+.|+.|.
T Consensus        80 ~~~~~~~~~~~~~~d~f~~~fg~~~~~---~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~  156 (365)
T PRK14290         80 NFNWDNFTHFSDINDIFNQIFGGNFGS---DFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCS  156 (365)
T ss_pred             CccccccccccchhHHHHHHhcCcccc---ccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCc
Confidence            00  0110 000112233232211000   000000 0001112378999999999999999999999999999999999


Q ss_pred             CCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCC
Q 012891          237 GRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD  308 (454)
Q Consensus       237 G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~  308 (454)
                      |+|.... ...+|+.|+|.|.+++.        +...+|+.|+|.|++++.+|..|+|.|++.+.++++|.||||+.+|+
T Consensus       157 G~g~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~  235 (365)
T PRK14290        157 GTGAKNG-KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNL  235 (365)
T ss_pred             cccCCCC-CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCc
Confidence            9998775 57899999999986542        12578999999999999999999999999999999999999999999


Q ss_pred             EEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEE
Q 012891          309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLV  388 (454)
Q Consensus       309 ~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~  388 (454)
                      +|+|+|+|+.  .++.+|||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|++|.++|+||+++++|++++
T Consensus       236 ~i~~~g~G~~--~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~ir  313 (365)
T PRK14290        236 RLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLK  313 (365)
T ss_pred             EEEEccccCC--CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcEEE
Confidence            9999999986  47789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhcccCC
Q 012891          389 LRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNEN  438 (454)
Q Consensus       389 l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~~~~~~  438 (454)
                      |+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+..+-++++
T Consensus       314 i~g~G~p~~~~-~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~~~~~~~~  362 (365)
T PRK14290        314 IKGAGMPHLNG-HGSGDLLVRINVEVPKRLTSKQKELIREFFDIKENHKS  362 (365)
T ss_pred             ECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhhhcccc
Confidence            99999997543 24799999999999999999999999999976544443

>PRK14289 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.2e-73  Score=580.76  Aligned_cols=349  Identities=36%  Similarity=0.636  Sum_probs=292.6

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||++|||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|++||++|..+.... .+.+
T Consensus         4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~-~~~~   82 (386)
T PRK14289          4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGA-AGGG   82 (386)
T ss_pred             cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccC-CCCC
Confidence            579999999999999999999999999999999999888899999999999999999999999999987653211 0001


Q ss_pred             CCCCccccCCCCccccc---ccccccCcccch--hccccccccccCCCCcEEEEEEEeeccccCcceeeeeceeecccCC
Q 012891          161 DAEGFRYAGDAEGFRYA---YQTHFSDSFHKI--FSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC  235 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~---~~~~f~~~f~~~--F~~~f~~~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C  235 (454)
                      ++.+.. .+..+.|..|   |+..|+ ++...  |..........++.|+++.|.|||+|+|+|+++++.+.+.+.|+.|
T Consensus        83 ~~~~~~-~~~~~~f~~f~~~fg~~~g-g~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C  160 (386)
T PRK14289         83 GFSGEG-MSMEDIFSMFGDIFGGHGG-GFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHC  160 (386)
T ss_pred             CCCCCC-cChhhhhHHhhhhhccccc-CcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCC
Confidence            111000 0011122111   221110 00000  0000000123468899999999999999999999999999999999


Q ss_pred             CCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCC
Q 012891          236 HGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG  307 (454)
Q Consensus       236 ~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G  307 (454)
                      .|+|.........|+.|+|.|.++..        .+..+|+.|+|+|++++..|..|.|.|++.+.++++|.||||+++|
T Consensus       161 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G  240 (386)
T PRK14289        161 HGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEG  240 (386)
T ss_pred             CCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCC
Confidence            99999988888999999999987643        1367899999999999999999999999999999999999999999


Q ss_pred             CEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEE
Q 012891          308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL  387 (454)
Q Consensus       308 ~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~  387 (454)
                      ++|+|+|+|++...+..+|||+|+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||+++|+||+++++|+++
T Consensus       241 ~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~  320 (386)
T PRK14289        241 MQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGKVL  320 (386)
T ss_pred             CEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCceEEEEECCccCCCcEE
Confidence            99999999998766778999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       388 ~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      +|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|+...
T Consensus       321 ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~~~  365 (386)
T PRK14289        321 RLRNKGLPSVNG-YGTGDLLVNVSVYIPETLSKEEKQTLEKMENSD  365 (386)
T ss_pred             EECCCCcCCCCC-CCCCcEEEEEEEEeCCCCCHHHHHHHHHHHhhc
Confidence            999999997532 247999999999999999999999999999853

>PRK14293 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.9e-72  Score=572.69  Aligned_cols=344  Identities=37%  Similarity=0.678  Sum_probs=288.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCC
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD  161 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~  161 (454)
                      .|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||+||+||.+|++||.+|..+..+.    .+
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~----~~   77 (374)
T PRK14293          3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGA----AG   77 (374)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccC----CC
Confidence            69999999999999999999999999999999997 46788999999999999999999999999976543210    00


Q ss_pred             CCCcc-ccCCCCcccccccccccCcccchhccccccccccCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCc
Q 012891          162 AEGFR-YAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGF  240 (454)
Q Consensus       162 ~~~~~-~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~  240 (454)
                      +.++. +.+..+.|+.||+. |+ +... .........+.+++|+++.|.|||+|+|+|+++++.+++.+.|+.|.|+|.
T Consensus        78 ~~~~~~~~~~~d~f~~~fg~-~~-~~~~-~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~  154 (374)
T PRK14293         78 FPDMGDMGGFADIFETFFSG-FG-GAGG-QGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGA  154 (374)
T ss_pred             cCCcccccchHHHHHHHhcc-cC-CCCC-CCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCC
Confidence            00000 00001222222221 00 0000 000000011346789999999999999999999999999999999999999


Q ss_pred             cCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCEEEE
Q 012891          241 PADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRV  312 (454)
Q Consensus       241 ~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~  312 (454)
                      ........|+.|+|+|.+...        ....+|+.|.|.|++++++|..|.|.|++.+.++++|.||||+++|++|+|
T Consensus       155 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l  234 (374)
T PRK14293        155 KPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRV  234 (374)
T ss_pred             CCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEE
Confidence            988888999999999986532        125789999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEEEcCC
Q 012891          313 PEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGK  392 (454)
Q Consensus       313 ~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~l~g~  392 (454)
                      +|+|++...+..+|||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+||||+++|+||+++++|++++|+|+
T Consensus       235 ~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~g~  314 (374)
T PRK14293        235 SGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENK  314 (374)
T ss_pred             ccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCCEEEECCC
Confidence            99999876667789999999999999999999999999999999999999999999999988999999999999999999


Q ss_pred             CcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          393 GLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       393 Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      |||..+....+|||||+|+|+||+.|+++|+++|++|++.+
T Consensus       315 G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~~~  355 (374)
T PRK14293        315 GVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAKIK  355 (374)
T ss_pred             CCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            99976443457999999999999999999999999999764

>PRK14292 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.2e-71  Score=562.11  Aligned_cols=330  Identities=36%  Similarity=0.652  Sum_probs=284.2

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCC
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD  161 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~  161 (454)
                      .|||++|||+++||.+|||+|||+||++||||+++ +++|+++|++|++||+||+||.+|+.||++|..+..+. .+.++
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~-~~~~~   79 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGM-PGGDP   79 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccc-cCCcc
Confidence            59999999999999999999999999999999997 57789999999999999999999999999987642110 00001


Q ss_pred             CCCccccCCCCcccccccccccCcccchhcccccc---------ccccCCCCcEEEEEEEeeccccCcceeeeeceeecc
Q 012891          162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC  232 (454)
Q Consensus       162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~---------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C  232 (454)
                      ++++.       |          ++.++|+.+|++         ..+.++.|+++.+.|||+|+|+|+++++.+++.+.|
T Consensus        80 ~~~~~-------~----------d~~d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C  142 (371)
T PRK14292         80 FGGMG-------F----------DPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTEC  142 (371)
T ss_pred             cCccC-------C----------ChHHHHHHhhCCCCcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecC
Confidence            11100       0          112333333331         123468899999999999999999999999999999


Q ss_pred             cCCCCCCccCCC-ccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCc
Q 012891          233 DSCHGRGFPADA-KTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG  303 (454)
Q Consensus       233 ~~C~G~G~~~~~-~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G  303 (454)
                      +.|+|+|..... ...+|+.|+|+|.+...        ....+|+.|+|.|..++..|..|.|.|++.+.++++|.||||
T Consensus       143 ~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G  222 (371)
T PRK14292        143 EHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRG  222 (371)
T ss_pred             CCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCC
Confidence            999999997765 37899999999987532        136789999999999999999999999999999999999999


Q ss_pred             cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCC
Q 012891          304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQP  383 (454)
Q Consensus       304 ~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~  383 (454)
                      +++|++|+|+|+|++.+.+ . |||||+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+||||+..|+||+++++
T Consensus       223 ~~~G~~i~~~G~G~~~~~~-~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~  300 (371)
T PRK14292        223 IDEGYRIRVAGMGNEGPGG-N-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQH  300 (371)
T ss_pred             CCCCcEEEEecCcCCCCCC-C-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCC
Confidence            9999999999999997543 3 9999999999999999999999999999999999999999999999888999999999


Q ss_pred             CcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       384 g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      |++++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|+..+
T Consensus       301 g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~~  349 (371)
T PRK14292        301 GDLHRLRGQGMPRLQG-AGTGDLIVEYEIAVPKQLSPEAREALEAYARAV  349 (371)
T ss_pred             CcEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            9999999999997532 246999999999999999999999999999653

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=6.5e-67  Score=511.48  Aligned_cols=321  Identities=32%  Similarity=0.576  Sum_probs=281.9

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ...||+||||+++||++|||+|||+||++||||||++   +.++|++|++||||||||++|.+||++|+++......+  
T Consensus         3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~--   77 (337)
T KOG0712|consen    3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGG--   77 (337)
T ss_pred             ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCC--
Confidence            4689999999999999999999999999999999986   78999999999999999999999999987765321111  


Q ss_pred             CCCCccccCCCCcccccccccccCcccchhccccccccccCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCc
Q 012891          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGF  240 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~  240 (454)
                        +++      ..|+.||+  |+         ..+.+...+++|+.+.+.|+|+|+|.|.++.+.++++.+|+.|.|.|.
T Consensus        78 --~g~------~~f~~~F~--~g---------~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGg  138 (337)
T KOG0712|consen   78 --GGF------GGFSQFFG--FG---------GNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGG  138 (337)
T ss_pred             --CCC------ccHHHhcc--CC---------CcCccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCC
Confidence              111      11555544  10         112234456999999999999999999999999999999999999999


Q ss_pred             cCCCccccCCCccccceEEeC---------CccccCCCCCCceEE--eeeecccccCCceeeceEEEEEEecCccCCCCE
Q 012891          241 PADAKTKICSTCRGIGRVTIP---------PFTSTCSTCKGLGRI--IKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT  309 (454)
Q Consensus       241 ~~~~~~~~C~~C~G~G~~~~~---------~~~~~C~~C~G~G~~--~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~  309 (454)
                      ..+... .|+.|.|+|..+..         +++..|..|+|+|.+  .++.|+.|.|.++++..+.++|+|++|+.+++.
T Consensus       139 ksg~~~-~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~k  217 (337)
T KOG0712|consen  139 KSGSAP-KCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQK  217 (337)
T ss_pred             CCCCCC-CCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccce
Confidence            877654 89999999986431         358899999999998  478999999999999999999999999999999


Q ss_pred             EEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCC--CCCCcE
Q 012891          310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQL  386 (454)
Q Consensus       310 i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~--~~~g~~  386 (454)
                      +.+.|++++.+ +..|||++|.|..++|+.|.|.|+||++..+|++.||++|+.+.+.||||+ +.+.++|+  ++||++
T Consensus       218 i~f~geadea~-g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~  296 (337)
T KOG0712|consen  218 ITFKGEADEAP-GTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDT  296 (337)
T ss_pred             eeeeeeeeecC-CCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHE
Confidence            99999999875 667999999999999999999999999999999999999999999999998 68888886  899999


Q ss_pred             EEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Q 012891          387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFA  430 (454)
Q Consensus       387 ~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~  430 (454)
                      ++|+|+|||..+++  +|||||+|+|+||+ |++.+..+|+.++
T Consensus       297 ~~v~~~gmp~~~~~--~g~lyi~~~v~fp~-~~~~~~~~l~~~l  337 (337)
T KOG0712|consen  297 KRVEGEGMPIFRNP--KGDLYIKFEVKFPK-LSPSQLKMLEDLL  337 (337)
T ss_pred             EeecCCCcccccCC--CCcEEEEEEEEcCC-CChHHHHHHHhhC
Confidence            99999999998765  89999999999999 9999999998764

>PRK14299 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.6e-58  Score=456.66  Aligned_cols=269  Identities=37%  Similarity=0.637  Sum_probs=221.2

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||+||||+++||.+|||+|||+||++||||+++ ++.++++|++|++||+||+||.+|+.||++|..+......+..
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~   81 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPP   81 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCC
Confidence            479999999999999999999999999999999997 5788999999999999999999999999998764321100000


Q ss_pred             -CCCCccccCCCCcccccccccccCcccchhcccccc---------------ccccCCCCcEEEEEEEeeccccCcceee
Q 012891          161 -DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------------ETSHFAPDIQVELVLSFAEAAKGCTKHV  224 (454)
Q Consensus       161 -~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~---------------~~~~~g~di~~~l~itlee~~~G~~k~v  224 (454)
                       ...++      ..|..+   .+ ++|.++|+.+|++               ....++.|+++.+.|||+|+|.|+++.+
T Consensus        82 ~~~~~~------~~~~~~---~~-~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i  151 (291)
T PRK14299         82 PGPPGG------GDFSGF---NV-GDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVV  151 (291)
T ss_pred             CCCCCC------CCcccc---Cc-CCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEE
Confidence             00000      001000   00 1122333333321               1134688999999999999999999887


Q ss_pred             eeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCcc
Q 012891          225 SFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV  304 (454)
Q Consensus       225 ~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~  304 (454)
                      .+.                                                                 .++++|.||||+
T Consensus       152 ~l~-----------------------------------------------------------------g~~~~V~Ip~G~  166 (291)
T PRK14299        152 EVA-----------------------------------------------------------------GERLSVRIPPGV  166 (291)
T ss_pred             eeC-----------------------------------------------------------------CEEEEEecCCCc
Confidence            541                                                                 146789999999


Q ss_pred             CCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCC
Q 012891          305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG  384 (454)
Q Consensus       305 ~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g  384 (454)
                      ++|++|+|+|+|++.      |||+|+|++++|+.|+|+|+||+++++|++.+|++|+++.|+||||.++|+||+++++|
T Consensus       167 ~~G~~ir~~g~G~~~------GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~~~v~ip~~~~~g  240 (291)
T PRK14299        167 REGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEVTIPPRTQAG  240 (291)
T ss_pred             CCCcEEEECCCCCCC------CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCCEEEEeCCCcCCC
Confidence            999999999999863      89999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891          385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE  433 (454)
Q Consensus       385 ~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~  433 (454)
                      ++++|+|+|||..+  ..+|||||+|+|.||+.|+++|+++|++|+...
T Consensus       241 ~~~rl~g~G~p~~~--~~~GDL~v~~~V~~P~~l~~~~~~~l~~l~~~~  287 (291)
T PRK14299        241 RKLRLKGKGWPRGP--AGRGDQYAEVRITIPTRPTPEEERLYKQLAELY  287 (291)
T ss_pred             CEEEECCCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhh
Confidence            99999999999643  347999999999999999999999999998653

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=100.00  E-value=5.7e-57  Score=448.78  Aligned_cols=284  Identities=31%  Similarity=0.600  Sum_probs=231.7

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~  160 (454)
                      ..|||++|||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|+.||.++..+.... ++..
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~-~~~~   80 (306)
T PRK10266          3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQ-FNRQ   80 (306)
T ss_pred             cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcc-cccc
Confidence            369999999999999999999999999999999987 46789999999999999999999999999864321100 0000


Q ss_pred             CCCCccccCCCCcccccccccccCcccchhcccccc-------ccccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (454)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~-------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~  233 (454)
                      .  .+   +++..|.       ..+|.++|+.+|++       ....++.|+.+++.|+|+|+|.|+.+++.+.+.+   
T Consensus        81 ~--~~---~~~~~~~-------~~~~~~~f~~~~g~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~---  145 (306)
T PRK10266         81 F--QH---GDGQSFN-------AEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV---  145 (306)
T ss_pred             c--cc---CCCCCCC-------CCCHHHHHHHHhCCCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc---
Confidence            0  00   0000110       01244555555552       1133678999999999999999999999876542   


Q ss_pred             CCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCEEEEC
Q 012891          234 SCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP  313 (454)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~  313 (454)
                       |.                 |.|.+.                              ....++++|.||||+++|++|+|+
T Consensus       146 -~~-----------------g~G~~~------------------------------~~~~~~~~V~Ip~G~~~G~~i~~~  177 (306)
T PRK10266        146 -YN-----------------AFGMIE------------------------------QEIPKTLNVKIPAGVGNGQRIRLK  177 (306)
T ss_pred             -cc-----------------CCCeEE------------------------------EeeeEEEEEEECCCCcCCcEEEEe
Confidence             11                 222110                              012367999999999999999999


Q ss_pred             CCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEEEcCCC
Q 012891          314 EAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKG  393 (454)
Q Consensus       314 g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~l~g~G  393 (454)
                      |+|++...+..+|||+|+|+++||+.|+|+|+||+++++|++.+|++|+++.|+|+||+++|+||+++++|++++|+|+|
T Consensus       178 g~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~v~v~ip~g~~~g~~~ri~g~G  257 (306)
T PRK10266        178 GQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKG  257 (306)
T ss_pred             cCCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCccEEEEeCCCcCCCCEEEECCCC
Confidence            99998766778999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891          394 LAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE  432 (454)
Q Consensus       394 mp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~  432 (454)
                      ||..+   .+|||||+|+|.+|+.||++|+++|++|++.
T Consensus       258 ~p~~~---~~GdL~v~~~v~~P~~l~~~q~~l~~~l~~~  293 (306)
T PRK10266        258 LVSKK---QTGDLYAVLKIVMPPKPDEKTAALWQQLADA  293 (306)
T ss_pred             CCCCC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99754   3799999999999999999999999999875

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=100.00  E-value=2.4e-41  Score=354.92  Aligned_cols=173  Identities=17%  Similarity=0.200  Sum_probs=144.6

Q ss_pred             EEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeeccccc
Q 012891          206 QVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCK  285 (454)
Q Consensus       206 ~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~  285 (454)
                      ...+.|+|+++|+||++++++.|.+.|    |.|.                                             
T Consensus       660 ~y~l~vtLEeLY~G~tKkIKitR~V~~----g~G~---------------------------------------------  690 (871)
T TIGR03835       660 VYEEEVPQILFFNNQIKEIKYTRHTVD----GNTE---------------------------------------------  690 (871)
T ss_pred             EEecccCHHHHhCCCeEEEEEEEeecc----CCCc---------------------------------------------
Confidence            777889999999999999999887654    1111                                             


Q ss_pred             CCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEE
Q 012891          286 GSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD  365 (454)
Q Consensus       286 g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~  365 (454)
                        ..+.+.++++|.||||+++|++|+|+|+|+.++ ++ +|||||+|++++|+.|+|+|+||+++++|+|.+||+|+++.
T Consensus       691 --ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegp-gg-~GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgtIe  766 (871)
T TIGR03835       691 --STTNEAITLEIQLPITSQLNISAIFKGFGHDFG-NG-CGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIID  766 (871)
T ss_pred             --ceeeeeEEEEEecCCCCCCCCEEEeccccCCCC-CC-CCCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCEEE
Confidence              123456799999999999999999999999864 33 49999999999999999999999999999999999999999


Q ss_pred             EeCCCCEEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE-CCCC--CCHHHHHHHHHHHHHh
Q 012891          366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN-FPTA--LNERQRAILEEFAEEE  433 (454)
Q Consensus       366 i~tldG~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~-~P~~--ls~~q~~~l~~~~~~~  433 (454)
                      |+||||++.|+||+++++|++++|+|+|||..+  ..||||||+|.|. +++.  -|.-|.+..-+|+..+
T Consensus       767 IpTLDGrVkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~~~~k~~~~~n~qv~~f~~l~~~e  835 (871)
T TIGR03835       767 VFGPNKLFNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYSSVMKKNDRTNVQVQQFNKLALRE  835 (871)
T ss_pred             eeCCCCCEEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEeeccccCCcCChHHHHHHHHHHHH
Confidence            999999999999999999999999999999643  3479999999987 4543  3444555555544443

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=5.5e-43  Score=338.67  Aligned_cols=311  Identities=30%  Similarity=0.431  Sum_probs=239.8

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccC
Q 012891           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA  159 (454)
Q Consensus        80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~  159 (454)
                      ..+|||+||||+++||..|||+|||+||++||||+|+++|.|.++|++|+.||+|||||.+|+.||++|++|.+...   
T Consensus        14 ~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~---   90 (336)
T KOG0713|consen   14 AGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDEN---   90 (336)
T ss_pred             cCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccc---
Confidence            35899999999999999999999999999999999999999999999999999999999999999999877765321   


Q ss_pred             CCCCCccccCC-CCcccccccccccCcccchhccccccccccCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCC
Q 012891          160 GDAEGFRYAGD-AEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGR  238 (454)
Q Consensus       160 ~~~~~~~~~~~-~~~f~~~~~~~f~~~f~~~F~~~f~~~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~  238 (454)
                      ...++   +++ .++|..||+.. +    -.|+.....+...+|.++...+..+++++|.|...+....+.+.|. |.|+
T Consensus        91 ~~~~~---g~~~~~~f~~~f~df-g----~~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~-~~g~  161 (336)
T KOG0713|consen   91 KDGEG---GGGGNDIFSAFFGDF-G----VTVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKP-APGT  161 (336)
T ss_pred             ccccc---CCcccchHHHhhccc-c----cccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceee-cCcc
Confidence            11111   111 25666655422 1    1112112223466788999999999999999987666554444332 1111


Q ss_pred             CccCCCccccCCCccccceEEeCCccccCCCCCCceEEe-eeecccccCCceeeceEEEEEEecCccCCCCEEEECCCcC
Q 012891          239 GFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII-KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGN  317 (454)
Q Consensus       239 G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~-~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~  317 (454)
                      -        .   |+-.-      ....+..|.|....+ +..|.+|.+.+......+.++.+..|...|....+..+|.
T Consensus       162 ~--------~---~~~~~------~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  224 (336)
T KOG0713|consen  162 R--------K---CNCRL------EMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEGE  224 (336)
T ss_pred             c--------c---cCChh------hheeeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccCC
Confidence            1        0   11000      011233344444433 4578888888888889999999999999999999999998


Q ss_pred             CCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCCCCCcEEEEcCCCcCC
Q 012891          318 AGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAK  396 (454)
Q Consensus       318 ~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~~~g~~~~l~g~Gmp~  396 (454)
                      +.. -+.+||+++.+..-+|+.|.|+++||++++.|++.+++.|+..++.++|+. +.+.--.+..|+..++.+++|||.
T Consensus       225 ~h~-~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~~~~~~~~~  303 (336)
T KOG0713|consen  225 PHI-DGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTRKKGEGMPL  303 (336)
T ss_pred             cce-ecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhhhhhccchh
Confidence            764 568999999999999999999999999999999999999999999999997 455555678899999999999997


Q ss_pred             CCCCCCCCcEEEEEEEECCC-CCCH
Q 012891          397 NGLFLDHGDQYVRFRVNFPT-ALNE  420 (454)
Q Consensus       397 ~~~~~~rGdL~v~~~V~~P~-~ls~  420 (454)
                      .......|+++++|.+.+|. .++.
T Consensus       304 l~~~~~~~~~~~t~~~~~~~~~~~~  328 (336)
T KOG0713|consen  304 LKNRNEKGNLYVTFDVEFPKSSLSD  328 (336)
T ss_pred             hhccchhcceeEEecccCcccccch
Confidence            64445679999999999995 4666

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=6.4e-40  Score=321.49  Aligned_cols=240  Identities=43%  Similarity=0.774  Sum_probs=204.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCC
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD  161 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~  161 (454)
                      .|||+||||+++|+..|||+||++||++||||.|.+ ++|.++|++|.+|||||+|+.+|.+||.++..+       ..+
T Consensus        43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~-------~~~  114 (288)
T KOG0715|consen   43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ-------HGE  114 (288)
T ss_pred             cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc-------ccc
Confidence            499999999999999999999999999999999986 489999999999999999999999999996543       000


Q ss_pred             CCCccccCCCCcccccccccccCcccchhcccccc-c-cccCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCC
Q 012891          162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-E-TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRG  239 (454)
Q Consensus       162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~-~-~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G  239 (454)
                      +       +++++             ++|...|++ . ....+.++++.+.++|++|..|+.+.+.+.....|..|.|.|
T Consensus       115 ~-------~g~~~-------------~~~~~~~~~~~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~  174 (288)
T KOG0715|consen  115 F-------GGNPF-------------DVFLEFFGGKMNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSG  174 (288)
T ss_pred             c-------cCCcc-------------chHHHhhcccccccccCcccccccccCHHHHhhccccceEEEeecccccccCcC
Confidence            0       11221             122222222 1 122345788889999999999999999999999999999999


Q ss_pred             ccCCCccccCCCccccceEEe---CCccc-cCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCEEEECCC
Q 012891          240 FPADAKTKICSTCRGIGRVTI---PPFTS-TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEA  315 (454)
Q Consensus       240 ~~~~~~~~~C~~C~G~G~~~~---~~~~~-~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~  315 (454)
                      ...+.....|..|.|+|.+..   .++.. +|..|.|.|.+..+.|..|.|.|.+...+.+.|.+|+|+.++.+|++.+.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~  254 (288)
T KOG0715|consen  175 AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGH  254 (288)
T ss_pred             cccccccccchhhhCcccccccccCCcceeecccccccceeccchHHHhhcchhhhhheeEEeecCcccccccEEEEecC
Confidence            999999999999999995433   23433 69999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHH
Q 012891          316 GNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQ  357 (454)
Q Consensus       316 G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~e  357 (454)
                      |..        ||+|.+.|.+++.|+|+|.|+++++.|++.+
T Consensus       255 ~~~--------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~  288 (288)
T KOG0715|consen  255 GND--------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ  288 (288)
T ss_pred             Ccc--------eEEEEEEeccCcccccccCcccccccccccC
Confidence            754        9999999999999999999999999998754

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.88  E-value=4.3e-22  Score=196.23  Aligned_cols=264  Identities=30%  Similarity=0.476  Sum_probs=176.0

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA  159 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~  159 (454)
                      ..|||++|+|.++|+.+||++||+++|++||||+++.. ..++++|++|++||++|+||.+|..||.++..+..+.....
T Consensus         2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~   81 (306)
T KOG0714|consen    2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS   81 (306)
T ss_pred             cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence            46999999999999999999999999999999998765 24556899999999999999999999999874443311000


Q ss_pred             CC--CC--CccccCCCCccccccccc--ccCc----------c-cch-------hcccccc-----------ccccCCCC
Q 012891          160 GD--AE--GFRYAGDAEGFRYAYQTH--FSDS----------F-HKI-------FSEIFED-----------ETSHFAPD  204 (454)
Q Consensus       160 ~~--~~--~~~~~~~~~~f~~~~~~~--f~~~----------f-~~~-------F~~~f~~-----------~~~~~g~d  204 (454)
                      ..  .+  .+......+.|.+||+..  |+..          + ...       +..+.+.           ....+...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (306)
T KOG0714|consen   82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSPP  161 (306)
T ss_pred             CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCCC
Confidence            00  00  011111122344444311  1000          0 000       0000000           00011111


Q ss_pred             cEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccc
Q 012891          205 IQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTC  284 (454)
Q Consensus       205 i~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C  284 (454)
                      +...+.+++++.+.|+.+...+.+...                                               ..... 
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~-  193 (306)
T KOG0714|consen  162 VEHPLRVSLEDLYKGESKKMKISRQSF-----------------------------------------------TSNGR-  193 (306)
T ss_pred             ccCCcceeHHHhccccceeeecccccc-----------------------------------------------cCCcc-
Confidence            233333355555555544444332110                                               00000 


Q ss_pred             cCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEE--EeeCHHHHhCCC
Q 012891          285 KGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD--SNISFTQAILGG  362 (454)
Q Consensus       285 ~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~--~~Isl~eAllG~  362 (454)
                         ........+.+.+.++++.|..+....+|+..+ +..|-++++.+..++|+.|.+.++||...  ..|++.+|++|.
T Consensus       194 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~  269 (306)
T KOG0714|consen  194 ---EGSSRSRYLSISIKPGWKEGTKITFPEEGDEEP-GILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGV  269 (306)
T ss_pred             ---cccCccceeEEeccCCcccccceeccccccccC-CcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCc
Confidence               012345678899999999999999999998764 36788999999999999999999999999  999999999999


Q ss_pred             EEEEeCCCCE-EEEEeC-CCCCCCcEEEEcCCCcCC
Q 012891          363 KVDVPTLSGK-VQVKIP-KGVQPGQLLVLRGKGLAK  396 (454)
Q Consensus       363 ~~~i~tldG~-~~v~ip-~~~~~g~~~~l~g~Gmp~  396 (454)
                      ...++++++. ..+.+. ..+.++...+++++|||.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (306)
T KOG0714|consen  270 TVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC  305 (306)
T ss_pred             ceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence            9999999997 344444 567899999999999985

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.85  E-value=1.9e-21  Score=156.03  Aligned_cols=80  Identities=43%  Similarity=0.783  Sum_probs=69.3

Q ss_pred             CeEEEEeeCHHHHhCCCEEEEeCCCC-EEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHH
Q 012891          346 DVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRA  424 (454)
Q Consensus       346 DL~~~~~Isl~eAllG~~~~i~tldG-~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~  424 (454)
                      ||+++++|+++||++|++++|+|+|| .++|+||+++++|++++|+|+|||.......+|||||+|+|.||++||++||+
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~   80 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE   80 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence            89999999999999999999999999 68999999999999999999999987554568999999999999999999998


Q ss_pred             H
Q 012891          425 I  425 (454)
Q Consensus       425 ~  425 (454)
                      |
T Consensus        81 l   81 (81)
T PF01556_consen   81 L   81 (81)
T ss_dssp             H
T ss_pred             C
Confidence            6

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.77  E-value=1.6e-19  Score=170.25  Aligned_cols=72  Identities=49%  Similarity=0.808  Sum_probs=68.4

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS  152 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~  152 (454)
                      ..|+|+||||+++|+.++||||||+||++||||+++++|++.++|++||+||++|+||.+|..||.+|..+.
T Consensus        30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l  101 (279)
T KOG0716|consen   30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL  101 (279)
T ss_pred             hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence            579999999999999999999999999999999999999999999999999999999999999999976543

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.74  E-value=1.6e-17  Score=156.45  Aligned_cols=68  Identities=56%  Similarity=0.903  Sum_probs=64.8

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh-HHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRDSEKRAQYDRR  147 (454)
Q Consensus        80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~-a~~~f~~i~~Ay~vL~d~~~r~~yd~~  147 (454)
                      ...+||+||||+++|+..||++|||++|++||||+++.++. ++++|+.|++||++|+|+.+|..||..
T Consensus         4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~   72 (237)
T COG2214           4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKI   72 (237)
T ss_pred             hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence            45799999999999999999999999999999999998885 999999999999999999999999996

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.73  E-value=2.3e-18  Score=168.01  Aligned_cols=73  Identities=52%  Similarity=0.847  Sum_probs=69.3

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE  153 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~  153 (454)
                      ..|||++|||+.+|+..||++|||+.|++||||||+++|.|.++|+.+.+||+||+|+.+|+.||.++..+..
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~   76 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSS   76 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhccc
Confidence            5799999999999999999999999999999999999999999999999999999999999999999765543

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.72  E-value=5.8e-18  Score=129.47  Aligned_cols=63  Identities=54%  Similarity=0.979  Sum_probs=59.8

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHhhhhhhhhhhhc
Q 012891           83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYD  145 (454)
Q Consensus        83 ~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~r~~yd  145 (454)
                      |||+||||+++++.++||++|+++++++|||++..+. .+.+.|+.|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            5899999999999999999999999999999988665 58899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.71  E-value=5.9e-18  Score=169.44  Aligned_cols=75  Identities=40%  Similarity=0.721  Sum_probs=68.4

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCC
Q 012891           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN---PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSEN  154 (454)
Q Consensus        80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~---~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~  154 (454)
                      .+.|||.+|+|+++||.+|||+|||++++.|||||..+.   ..|++.|+.|.+||||||||.+|++||.+|++|...
T Consensus         7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t   84 (546)
T KOG0718|consen    7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKT   84 (546)
T ss_pred             chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccc
Confidence            456999999999999999999999999999999998732   248999999999999999999999999999988763

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.71  E-value=7e-18  Score=182.37  Aligned_cols=74  Identities=31%  Similarity=0.508  Sum_probs=68.1

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE  153 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~  153 (454)
                      ....+||+||||+++||..|||+|||+||++||||+++++ .|.++|++|++||+|||||.+|+.||++|..|..
T Consensus       570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~  643 (1136)
T PTZ00341        570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK  643 (1136)
T ss_pred             CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence            3468999999999999999999999999999999999864 6888999999999999999999999999876643

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.70  E-value=1.1e-17  Score=167.40  Aligned_cols=71  Identities=49%  Similarity=0.743  Sum_probs=66.0

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~  149 (454)
                      .+.+.||+||||.++|++.|||++||+||++||||+|+.. .+|.++|+.|+.||+|||||..|+.||.+..
T Consensus         5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hre   76 (508)
T KOG0717|consen    5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHRE   76 (508)
T ss_pred             hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHH
Confidence            4567999999999999999999999999999999998755 4689999999999999999999999999876

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.65  E-value=1.4e-16  Score=146.85  Aligned_cols=69  Identities=48%  Similarity=0.798  Sum_probs=63.8

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANK--NNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (454)
Q Consensus        80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~--~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~  148 (454)
                      ..+|+|+||||.++|+..+|++|||+||+++|||+++  ...+|.++|+.++.||.||+|.++|+.||..|
T Consensus        12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG   82 (264)
T KOG0719|consen   12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETG   82 (264)
T ss_pred             cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccC
Confidence            3469999999999999999999999999999999994  34568999999999999999999999999985

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.63  E-value=3.7e-16  Score=117.70  Aligned_cols=59  Identities=58%  Similarity=0.901  Sum_probs=54.6

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ChhHHHHHHHHHHHHHhhhhhhh
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-NPSAKRKFQEIRDAYETLRDSEK  140 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~-~~~a~~~f~~i~~Ay~vL~d~~~  140 (454)
                      +|||+||||+++++.++||+||++|++++|||++++ .+.+.+.|++|++||++|+||.+
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~   60 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK   60 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence            489999999999999999999999999999999986 56788999999999999999853

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.62  E-value=2.4e-15  Score=150.36  Aligned_cols=133  Identities=28%  Similarity=0.578  Sum_probs=99.0

Q ss_pred             EEEEEEEeeccccCcceeee--eceeecccCCCCCCccCCCc-------cccCCCccccceEEeCCccccCCCCCCceEE
Q 012891          206 QVELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADAK-------TKICSTCRGIGRVTIPPFTSTCSTCKGLGRI  276 (454)
Q Consensus       206 ~~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~~~-------~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~  276 (454)
                      +.++.++-...+.-|.-+-.  -+..+.|++|+|+|.....+       ..+|+.|+|+|.+    +..+|..|+|.|++
T Consensus       134 ~~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~----i~~pC~~C~G~G~v  209 (371)
T COG0484         134 KKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKI----IKDPCGKCKGKGRV  209 (371)
T ss_pred             eeeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeE----CCCCCCCCCCCCeE
Confidence            34566666665554443321  12568999999999754333       6799999999998    57899999999997


Q ss_pred             eeeecccccCC-ceeeceE-------------------------------------------------------------
Q 012891          277 IKDHCMTCKGS-GVVDGVK-------------------------------------------------------------  294 (454)
Q Consensus       277 ~~~~C~~C~g~-G~~~~~~-------------------------------------------------------------  294 (454)
                      .+..-.+++.. |+.++++                                                             
T Consensus       210 ~~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~  289 (371)
T COG0484         210 KKKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLD  289 (371)
T ss_pred             eeeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecC
Confidence            66555555543 3333322                                                             


Q ss_pred             -EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccc
Q 012891          295 -EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSR  342 (454)
Q Consensus       295 -~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R  342 (454)
                       .++|.||||+++|++++|+|+|.+...+...|||||+|+|.-...+..
T Consensus       290 g~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~  338 (371)
T COG0484         290 GRVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSD  338 (371)
T ss_pred             CCEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEEEEcCCCCCH
Confidence             678999999999999999999999877777899999999996665433

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.60  E-value=1.5e-15  Score=112.32  Aligned_cols=55  Identities=56%  Similarity=0.985  Sum_probs=51.7

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhh
Q 012891           83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD  137 (454)
Q Consensus        83 ~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d  137 (454)
                      |||++|||+++++.++||++|++|++++|||++.+.+.+.+.|++|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            6999999999999999999999999999999997556788999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>PHA03102 Small T antigen; Reviewed

Probab=99.59  E-value=1.1e-15  Score=135.64  Aligned_cols=66  Identities=24%  Similarity=0.466  Sum_probs=60.7

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891           82 RDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (454)
Q Consensus        82 ~~~Y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g  151 (454)
                      ..+|+||||+++|  |.+|||+|||++|+++|||++++    +++|++|++||++|+|+.+|..||.+|...
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~   72 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDS   72 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCcc
Confidence            5789999999999  99999999999999999999764    479999999999999999999999997543

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.59  E-value=1.6e-15  Score=147.52  Aligned_cols=69  Identities=48%  Similarity=0.747  Sum_probs=63.8

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRDSEKRAQYDRR  147 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~---~a~~~f~~i~~Ay~vL~d~~~r~~yd~~  147 (454)
                      +..+|||.||||.++|+..||-||||+||.+||||...+..   .|+++|..|..|-|||+||++|+.||..
T Consensus       391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnG  462 (504)
T KOG0624|consen  391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNG  462 (504)
T ss_pred             hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCC
Confidence            45689999999999999999999999999999999998644   2889999999999999999999999985

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.57  E-value=2.4e-15  Score=137.73  Aligned_cols=71  Identities=37%  Similarity=0.665  Sum_probs=65.1

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~  149 (454)
                      ....|||+||||+++||..|||+|||+|.++|||||++...+.++.|..|++||+.|+|+..|..|..||.
T Consensus        96 ~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~  166 (230)
T KOG0721|consen   96 RQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGN  166 (230)
T ss_pred             hhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCC
Confidence            34579999999999999999999999999999999998645667889999999999999999999999964

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.47  E-value=5.5e-14  Score=128.29  Aligned_cols=66  Identities=32%  Similarity=0.539  Sum_probs=58.8

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891           82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRR  147 (454)
Q Consensus        82 ~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~  147 (454)
                      +|||++|||++.  ++..+|+++||+|++++|||+..+.+.     +.+.|+.||+||++|+||.+|+.|+-.
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~   73 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLS   73 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHH
Confidence            489999999995  788999999999999999999865443     567899999999999999999999864

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.45  E-value=9e-14  Score=126.15  Aligned_cols=67  Identities=30%  Similarity=0.510  Sum_probs=58.4

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891           82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (454)
Q Consensus        82 ~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~vL~d~~~r~~yd~~~  148 (454)
                      .|||++|||++.  ++..+|+++||+|++++|||++.+..+   +.+.+..||+||++|+||.+|+.|+...
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l   73 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL   73 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence            589999999996  789999999999999999999874332   3345789999999999999999998764

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.44  E-value=1.4e-13  Score=125.94  Aligned_cols=67  Identities=31%  Similarity=0.513  Sum_probs=59.0

Q ss_pred             CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHHH-----HHHHHHHHHHhhhhhhhhhhhccc
Q 012891           81 KRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPSAKR-----KFQEIRDAYETLRDSEKRAQYDRR  147 (454)
Q Consensus        81 ~~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~a~~-----~f~~i~~Ay~vL~d~~~r~~yd~~  147 (454)
                      ..|||++|||++.  ++..+|+++||+|++++|||++.+.+.+++     .++.||+||++|+||.+|+.|+..
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~   78 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLH   78 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHH
Confidence            4799999999995  689999999999999999999876655443     458999999999999999999964

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.44  E-value=1.7e-13  Score=124.96  Aligned_cols=69  Identities=23%  Similarity=0.435  Sum_probs=61.3

Q ss_pred             CCCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891           80 SKRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (454)
Q Consensus        80 ~~~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~~  148 (454)
                      ...|||++||+++.  .+..+|+++||+|++++|||++.+.+.     +.+.|..||+||++|+||.+|+.|+...
T Consensus         2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l   77 (173)
T PRK00294          2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLAL   77 (173)
T ss_pred             CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence            35799999999996  778999999999999999999876553     5668999999999999999999999753

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.44  E-value=3.9e-13  Score=137.53  Aligned_cols=140  Identities=25%  Similarity=0.468  Sum_probs=98.4

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (454)
                      ..+.++-...+..|.-+-.  -.....|+.|+|+|....         ....+|+.|+|.|.+    +...|..|+|.|.
T Consensus       145 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~  220 (369)
T PRK14282        145 IPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKI----PGEYCHECGGSGR  220 (369)
T ss_pred             EEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCccee----CCCCCCCCCCcee
Confidence            4455555555544433221  123468999999997532         135699999999987    4678999999997


Q ss_pred             EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891          276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------  294 (454)
Q Consensus       276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------  294 (454)
                      +.+..-.++... |+..+.+                                                            
T Consensus       221 v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~l  300 (369)
T PRK14282        221 IRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLP  300 (369)
T ss_pred             EEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCC
Confidence            643221111111 1111110                                                            


Q ss_pred             ---EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEE
Q 012891          295 ---EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD  350 (454)
Q Consensus       295 ---~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~  350 (454)
                         +++|.||+|+++|++++|+|+|++...+..+|||||+|+|..|+.|.+++.+|+.+
T Consensus       301 dG~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~  359 (369)
T PRK14282        301 EGGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKE  359 (369)
T ss_pred             CCcEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence               58999999999999999999999864445689999999999999999999888654

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.40  E-value=8.4e-13  Score=134.92  Aligned_cols=140  Identities=21%  Similarity=0.509  Sum_probs=98.1

Q ss_pred             EEEEEeeccccCcceeee-eceeecccCCCCCCccCCC---------ccccCCCccccceEEeCCccccCCCCCCceEEe
Q 012891          208 ELVLSFAEAAKGCTKHVS-FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII  277 (454)
Q Consensus       208 ~l~itlee~~~G~~k~v~-~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~  277 (454)
                      .+.+.....+..|...-. ......|+.|+|+|.....         ...+|+.|+|.|.+    ....|+.|+|+|.+.
T Consensus       143 ~i~~~r~~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~  218 (365)
T PRK14290        143 RIKYRRNAMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRI----PEEKCPRCNGTGTVV  218 (365)
T ss_pred             EEEeeecccCCCCccccCCCCCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeE----ccCCCCCCCCceeEE
Confidence            445554554433322211 1245689999999964321         24689999999987    467899999999864


Q ss_pred             eeecccccCC-ceeeceE------------------------------------------------------------EE
Q 012891          278 KDHCMTCKGS-GVVDGVK------------------------------------------------------------EV  296 (454)
Q Consensus       278 ~~~C~~C~g~-G~~~~~~------------------------------------------------------------~~  296 (454)
                      +..-.+.... |+..+.+                                                            ++
T Consensus       219 ~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i  298 (365)
T PRK14290        219 VNEDISVKIPKGATDNLRLRVKGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKY  298 (365)
T ss_pred             EeeEEEEEECCCCCCCcEEEEccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceE
Confidence            4222222211 1111111                                                            68


Q ss_pred             EEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEE
Q 012891          297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS  351 (454)
Q Consensus       297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~  351 (454)
                      +|.||+|+++|++++|+|+|++...+..+|||||+|+|..++.|++++.+|+.++
T Consensus       299 ~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~  353 (365)
T PRK14290        299 NLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF  353 (365)
T ss_pred             EEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999999999999999999998655556899999999999999999998887653

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.38  E-value=1.2e-12  Score=134.05  Aligned_cols=141  Identities=25%  Similarity=0.504  Sum_probs=98.2

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (454)
                      ..+.++....+..|.-.-.  -.....|+.|+|+|....         ....+|+.|+|+|.+    +...|+.|+|.|.
T Consensus       134 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~  209 (377)
T PRK14298        134 KDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQV----IESPCPVCSGTGK  209 (377)
T ss_pred             EEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcc----cCCCCCCCCCccE
Confidence            4455555555543333221  123467999999996532         235689999999987    3567999999998


Q ss_pred             EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891          276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------  294 (454)
Q Consensus       276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------  294 (454)
                      +.+..-...... |+..+.+                                                            
T Consensus       210 v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl  289 (377)
T PRK14298        210 VRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTL  289 (377)
T ss_pred             EEEEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecC
Confidence            754322222211 2211111                                                            


Q ss_pred             --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEE
Q 012891          295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS  351 (454)
Q Consensus       295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~  351 (454)
                        .++|.||+|+++|++++|+|+|.+...+...|||||+|+|..++.+.+++.+|+.++
T Consensus       290 dG~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l  348 (377)
T PRK14298        290 YGKVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF  348 (377)
T ss_pred             CCCEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence              578999999999999999999998655556799999999999988988887776543

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.37  E-value=3.7e-13  Score=134.09  Aligned_cols=69  Identities=45%  Similarity=0.719  Sum_probs=65.3

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRR  147 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~  147 (454)
                      +...|||.|||+.++|+..|||+|||++|+.+|||++.++ .+++.+|++|-+||.+|+||.+|..||..
T Consensus       370 SkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg  439 (486)
T KOG0550|consen  370 SKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSG  439 (486)
T ss_pred             hhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccc
Confidence            4568999999999999999999999999999999999887 67899999999999999999999999985

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.36  E-value=1.8e-12  Score=132.57  Aligned_cols=118  Identities=29%  Similarity=0.599  Sum_probs=88.6

Q ss_pred             eecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCC-ceeeceE--------
Q 012891          229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--------  294 (454)
Q Consensus       229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--------  294 (454)
                      ...|+.|+|+|....     ....+|+.|+|.|..    +...|..|+|.|.+.+..=.+.... |+..+.+        
T Consensus       161 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~  236 (366)
T PRK14294        161 PTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKV----IVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGE  236 (366)
T ss_pred             cccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCee----cCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCcc
Confidence            468999999997531     135799999999987    4578999999998753221111111 1111111        


Q ss_pred             ------------------------------------------------------EEEEEecCccCCCCEEEECCCcCCCC
Q 012891          295 ------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAGG  320 (454)
Q Consensus       295 ------------------------------------------------------~~~V~Ip~G~~~G~~i~~~g~G~~~~  320 (454)
                                                                            .++|.||+|+++|++++|+|+|++..
T Consensus       237 ~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~iri~G~G~p~~  316 (366)
T PRK14294        237 AGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRFKGKGIPSL  316 (366)
T ss_pred             CCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEEEECCCCCCCC
Confidence                                                                  46899999999999999999999865


Q ss_pred             CCCCCccEEEEEEEecCCcccccCCCeEEE
Q 012891          321 RGRQHGNLFIKLKVADDPIFSRDGADVYVD  350 (454)
Q Consensus       321 ~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~  350 (454)
                      .+..+|||||+|+|..|+.|.++..+|+..
T Consensus       317 ~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~  346 (366)
T PRK14294        317 RGGGRGDQIIEVEVKVPTRLTKKQEELLTE  346 (366)
T ss_pred             CCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            555689999999999999999888777654

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.35  E-value=6.3e-13  Score=133.79  Aligned_cols=67  Identities=36%  Similarity=0.600  Sum_probs=64.5

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~  148 (454)
                      ..|+|.+|||+.++|+++|||.||++|...|||||. .+.|+|.|+.++.|||+|+|+.+|..||...
T Consensus       234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~  300 (490)
T KOG0720|consen  234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLEL  300 (490)
T ss_pred             CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence            579999999999999999999999999999999998 6899999999999999999999999999874

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.34  E-value=2.7e-12  Score=131.04  Aligned_cols=139  Identities=22%  Similarity=0.456  Sum_probs=95.9

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (454)
                      ..+.++....+..|.-.-.  -.....|+.|+|+|....     ....+|+.|.|+|.+    +...|..|+|.|.+.+.
T Consensus       139 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~  214 (365)
T PRK14285        139 NNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKI----ISNPCKSCKGKGSLKKK  214 (365)
T ss_pred             EEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccc----cCCCCCCCCCCCEEecc
Confidence            4455555555544433322  123467999999996432     236799999999987    45789999999976432


Q ss_pred             ecccccCC-ceeeceE---------------------------------------------------------------E
Q 012891          280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E  295 (454)
Q Consensus       280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~  295 (454)
                      .-.++... |+..+++                                                               .
T Consensus       215 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~  294 (365)
T PRK14285        215 ETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKK  294 (365)
T ss_pred             EEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCE
Confidence            21111111 1111110                                                               6


Q ss_pred             EEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEE
Q 012891          296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYV  349 (454)
Q Consensus       296 ~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~  349 (454)
                      ++|.||+|+++|++++|+|+|++...+...|||||+|+|..|+.|.+++..|+-
T Consensus       295 v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~  348 (365)
T PRK14285        295 IKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLLE  348 (365)
T ss_pred             EEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
Confidence            899999999999999999999986554557999999999999999887765543

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.33  E-value=3.2e-12  Score=131.05  Aligned_cols=141  Identities=24%  Similarity=0.505  Sum_probs=98.6

Q ss_pred             EEEEEEeeccccCcceeeee--ceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891          207 VELVLSFAEAAKGCTKHVSF--DAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~~--~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (454)
                      ..+.++....+..|.-.-.-  .....|+.|+|+|....     ....+|+.|+|+|..    +...|+.|+|.|.+.+.
T Consensus       135 ~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~  210 (371)
T PRK10767        135 KEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKI----IKDPCKKCHGQGRVEKE  210 (371)
T ss_pred             EEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeE----CCCCCCCCCCCceEeee
Confidence            44555555555444332221  23468999999996431     234689999999987    45779999999987543


Q ss_pred             ecccccCC-ceeeceE--------------------------------------------------------------EE
Q 012891          280 HCMTCKGS-GVVDGVK--------------------------------------------------------------EV  296 (454)
Q Consensus       280 ~C~~C~g~-G~~~~~~--------------------------------------------------------------~~  296 (454)
                      ...++... |+..+.+                                                              ++
T Consensus       211 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i  290 (371)
T PRK10767        211 KTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRV  290 (371)
T ss_pred             eeEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcE
Confidence            22222221 1111000                                                              57


Q ss_pred             EEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEE
Q 012891          297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS  351 (454)
Q Consensus       297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~  351 (454)
                      +|.||+|+++|++++|+|+|.+...+...|||||+|+|..++.|.+++.+|+.++
T Consensus       291 ~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l  345 (371)
T PRK10767        291 KLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF  345 (371)
T ss_pred             EEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            8999999999999999999998655556899999999999989999988886553

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.33  E-value=1.4e-12  Score=110.06  Aligned_cols=54  Identities=26%  Similarity=0.433  Sum_probs=48.4

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhh
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR  136 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~  136 (454)
                      +...++|+||||+++||.+|||++||+|++++|||+++ +   .+.|++|++||++|.
T Consensus        62 Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG-s---~~~~~kIneAyevL~  115 (116)
T PTZ00100         62 MSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG-S---TYIASKVNEAKDLLL  115 (116)
T ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHh
Confidence            44579999999999999999999999999999999864 3   468999999999995

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.33  E-value=5.3e-13  Score=124.65  Aligned_cols=67  Identities=43%  Similarity=0.759  Sum_probs=62.6

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~  148 (454)
                      ..|-|+||||+++|+.+||.+|||+||++||||++++ +++.+.|..|.+||++|.|...|..||-..
T Consensus        32 ~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-~e~k~~F~~iAtayeilkd~e~rt~ydyal   98 (329)
T KOG0722|consen   32 AENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-PESKKLFVKIATAYEILKDNETRTQYDYAL   98 (329)
T ss_pred             chhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-chhhhhhhhhhcccccccchhhHHhHHHHh
Confidence            4688999999999999999999999999999999985 677799999999999999999999999863

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.30  E-value=6e-12  Score=128.91  Aligned_cols=137  Identities=26%  Similarity=0.486  Sum_probs=92.9

Q ss_pred             EEEEEEeeccccCcceeeee--ceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891          207 VELVLSFAEAAKGCTKHVSF--DAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~~--~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (454)
                      .++.++....+..|.-.-.-  .....|+.|+|+|....     ....+|+.|+|.|.+.    ...|+.|+|.|.+.+.
T Consensus       137 k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~v~~~  212 (373)
T PRK14301        137 VTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVI----THPCPKCKGSGIVQQT  212 (373)
T ss_pred             EEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeec----CCCCCCCCCCceeccc
Confidence            44555555555544433221  23467999999997531     2357999999999983    5679999999987432


Q ss_pred             ecccccCC-ceeeceE--------------------------------------------------------------EE
Q 012891          280 HCMTCKGS-GVVDGVK--------------------------------------------------------------EV  296 (454)
Q Consensus       280 ~C~~C~g~-G~~~~~~--------------------------------------------------------------~~  296 (454)
                      .=.++... |+..+.+                                                              .+
T Consensus       213 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i  292 (373)
T PRK14301        213 RELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPV  292 (373)
T ss_pred             eEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccE
Confidence            11111111 1111000                                                              57


Q ss_pred             EEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCe
Q 012891          297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADV  347 (454)
Q Consensus       297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL  347 (454)
                      +|.||+|+++|++++|+|+|.+...+...|||||+|+|..++.+..+..++
T Consensus       293 ~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~~  343 (373)
T PRK14301        293 TLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEEL  343 (373)
T ss_pred             EEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            899999999999999999999876555689999999999887665554433

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.26  E-value=1.3e-11  Score=127.35  Aligned_cols=138  Identities=28%  Similarity=0.592  Sum_probs=92.0

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (454)
                      ..+.++-...+..|.-+-.  -.....|+.|+|+|....     ....+|+.|+|.|.+    +...|+.|+|.|.+.+.
T Consensus       151 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~  226 (391)
T PRK14284        151 KELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRV----ITDPCSVCRGQGRIKDK  226 (391)
T ss_pred             EEEEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcc----cCCcCCCCCCcceecce
Confidence            3455555555543332221  123467999999987431     134699999999987    45679999999876432


Q ss_pred             ecccccCC-ceeece----------------------------------------------------------------E
Q 012891          280 HCMTCKGS-GVVDGV----------------------------------------------------------------K  294 (454)
Q Consensus       280 ~C~~C~g~-G~~~~~----------------------------------------------------------------~  294 (454)
                      .-.+.... |+..++                                                                .
T Consensus       227 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~  306 (391)
T PRK14284        227 RSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEG  306 (391)
T ss_pred             EEEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCc
Confidence            21122111 111111                                                                1


Q ss_pred             EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeE
Q 012891          295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY  348 (454)
Q Consensus       295 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~  348 (454)
                      .++|.||+|+++|++++|+|+|++...+..+|||||+|+|..++.+..+..+|+
T Consensus       307 ~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll  360 (391)
T PRK14284        307 TCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELL  360 (391)
T ss_pred             EEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHH
Confidence            567999999999999999999998655556899999999998877766554443

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.26  E-value=1.1e-11  Score=126.83  Aligned_cols=138  Identities=24%  Similarity=0.532  Sum_probs=93.3

Q ss_pred             EEEEEEeeccccCcceee--eeceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891          207 VELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v--~~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (454)
                      ..+.++....+.-|.-.-  .-.....|+.|+|+|....         ....+|+.|.|+|.+    +...|..|+|.|.
T Consensus       131 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~  206 (371)
T PRK14287        131 TEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKI----IKQKCATCGGKGK  206 (371)
T ss_pred             EEEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCcc----ccccCCCCCCeeE
Confidence            445555555544333221  1223467999999997532         124699999999987    3567999999997


Q ss_pred             EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891          276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------  294 (454)
Q Consensus       276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------  294 (454)
                      +.+..-.++... |+..+.+                                                            
T Consensus       207 v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~l  286 (371)
T PRK14287        207 VRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTL  286 (371)
T ss_pred             EeeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcC
Confidence            643222222211 1111110                                                            


Q ss_pred             --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeE
Q 012891          295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY  348 (454)
Q Consensus       295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~  348 (454)
                        .++|.||+|+++|++++|+|+|.+...+...|||||+|+|..++.+.++...|+
T Consensus       287 dg~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll  342 (371)
T PRK14287        287 NGKVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELM  342 (371)
T ss_pred             CCCEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHH
Confidence              578999999999999999999998655556799999999998887766654443

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.25  E-value=1.3e-11  Score=125.93  Aligned_cols=137  Identities=30%  Similarity=0.561  Sum_probs=91.8

Q ss_pred             EEEEEEeeccccCcceeeee--ceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891          207 VELVLSFAEAAKGCTKHVSF--DAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~~--~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (454)
                      ..+.++....+..|.-.-.-  .....|+.|+|+|....         ....+|+.|+|.|.+.    ...|+.|.|.|.
T Consensus       136 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~  211 (354)
T TIGR02349       136 KEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKII----KEPCSTCKGKGR  211 (354)
T ss_pred             EEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceec----CCCCCCCCCCcE
Confidence            34555555555444332221  23568999999986431         2246999999999973    567999999997


Q ss_pred             Eeeeeccc--------------ccCCce------------ee--c-----------------------------------
Q 012891          276 IIKDHCMT--------------CKGSGV------------VD--G-----------------------------------  292 (454)
Q Consensus       276 ~~~~~C~~--------------C~g~G~------------~~--~-----------------------------------  292 (454)
                      +.+..-.+              ..|.|.            +.  .                                   
T Consensus       212 v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~l  291 (354)
T TIGR02349       212 VKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTL  291 (354)
T ss_pred             ecccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecC
Confidence            64311111              111111            00  0                                   


Q ss_pred             eEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCe
Q 012891          293 VKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADV  347 (454)
Q Consensus       293 ~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL  347 (454)
                      ..+++|.||+|+++|++++|+|+|++...+..+|||||+|+|..++.+.++..++
T Consensus       292 dG~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~  346 (354)
T TIGR02349       292 DGDVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKEL  346 (354)
T ss_pred             CceEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            0057899999999999999999999865555789999999999888777665444

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.25  E-value=3.4e-11  Score=123.35  Aligned_cols=132  Identities=27%  Similarity=0.551  Sum_probs=88.5

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (454)
                      .++.++-...+..|...-.  -.....|+.|+|+|....     ....+|+.|+|.|.+.    ...|..|+|.|.+.+.
T Consensus       138 k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~v~~~  213 (372)
T PRK14300        138 KNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQII----KNPCKKCHGMGRYHKQ  213 (372)
T ss_pred             EEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEe----CCCCCCCCCceEEEee
Confidence            3444444544443333221  123467999999997531     1356899999999984    5679999999987432


Q ss_pred             ecccccCC-ceeece---------------------------------------------------------------EE
Q 012891          280 HCMTCKGS-GVVDGV---------------------------------------------------------------KE  295 (454)
Q Consensus       280 ~C~~C~g~-G~~~~~---------------------------------------------------------------~~  295 (454)
                      .=.++... |+..+.                                                               +.
T Consensus       214 ~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~  293 (372)
T PRK14300        214 RNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGK  293 (372)
T ss_pred             EEEEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCE
Confidence            11111111 111000                                                               06


Q ss_pred             EEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccc
Q 012891          296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSR  342 (454)
Q Consensus       296 ~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R  342 (454)
                      ++|.||+|+++|++++|+|+|++...+..+|||||+|+|..+..+.-
T Consensus       294 i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~v~~P~~ls~  340 (372)
T PRK14300        294 VNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSK  340 (372)
T ss_pred             EEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCH
Confidence            89999999999999999999998655567899999999998765543

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.25  E-value=4.6e-11  Score=122.25  Aligned_cols=134  Identities=21%  Similarity=0.468  Sum_probs=89.7

Q ss_pred             EEEEEEeeccccCcceeee-eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeeee
Q 012891          207 VELVLSFAEAAKGCTKHVS-FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH  280 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~-~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~  280 (454)
                      .++.++....+..|.-+-. -.....|+.|+|+|....     ....+|+.|.|+|.+    +...|..|+|.|.+.+..
T Consensus       133 ~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~  208 (369)
T PRK14288        133 KTIKVQYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKI----IKTPCQACKGKTYILKDE  208 (369)
T ss_pred             EEEEEEeeccCCCCCCcccCCCCCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceE----ccccCccCCCcceEEEEE
Confidence            3444554544433322111 124578999999996431     224589999999997    356799999999875432


Q ss_pred             cccccCC-ceeeceE--------------------------------------------------------------EEE
Q 012891          281 CMTCKGS-GVVDGVK--------------------------------------------------------------EVK  297 (454)
Q Consensus       281 C~~C~g~-G~~~~~~--------------------------------------------------------------~~~  297 (454)
                      -.+.... |+..+.+                                                              .++
T Consensus       209 ~l~V~IP~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~  288 (369)
T PRK14288        209 EIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELE  288 (369)
T ss_pred             EEEEecCCCCCCCCEEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEE
Confidence            2222211 1111111                                                              589


Q ss_pred             EEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccC
Q 012891          298 VTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDG  344 (454)
Q Consensus       298 V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G  344 (454)
                      |.||+|+++|++++|+|+|++...+...|||||+|+|..+..+..+.
T Consensus       289 i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q  335 (369)
T PRK14288        289 LKIPRNARDRQTFAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQ  335 (369)
T ss_pred             EEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence            99999999999999999999865444469999999999887665443

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.24  E-value=8.6e-12  Score=121.87  Aligned_cols=60  Identities=38%  Similarity=0.584  Sum_probs=52.7

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--C-----hhHHHHHHHHHHHHHhhhhh
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN--N-----PSAKRKFQEIRDAYETLRDS  138 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~--~-----~~a~~~f~~i~~Ay~vL~d~  138 (454)
                      +...++|++|||++++|.+|||+|||+|+++||||++.+  .     +.++++|++|++||++|+..
T Consensus       197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~  263 (267)
T PRK09430        197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ  263 (267)
T ss_pred             CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence            345799999999999999999999999999999999743  1     24789999999999999863

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.23  E-value=4.9e-11  Score=122.43  Aligned_cols=128  Identities=30%  Similarity=0.540  Sum_probs=86.3

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (454)
                      ..+.++....+..|.-.-.  -.....|+.|+|+|....         ....+|+.|+|+|.+.    ...|+.|+|.|.
T Consensus       132 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~  207 (378)
T PRK14278        132 KQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVI----PDPCHECAGDGR  207 (378)
T ss_pred             EEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceee----CCCCCCCCCcee
Confidence            4555555655544433221  123467999999997432         1256899999999983    567999999998


Q ss_pred             EeeeecccccCC-ceeece-------------------------------------------------------------
Q 012891          276 IIKDHCMTCKGS-GVVDGV-------------------------------------------------------------  293 (454)
Q Consensus       276 ~~~~~C~~C~g~-G~~~~~-------------------------------------------------------------  293 (454)
                      +.+..-.+.... |+..+.                                                             
T Consensus       208 v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl  287 (378)
T PRK14278        208 VRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAI  287 (378)
T ss_pred             EecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecC
Confidence            643211111111 111000                                                             


Q ss_pred             --EEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891          294 --KEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP  338 (454)
Q Consensus       294 --~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~  338 (454)
                        ..++|.||+|+++|++++|+|+|++...+...|||||+|+|.-..
T Consensus       288 d~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~  334 (378)
T PRK14278        288 LDGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPT  334 (378)
T ss_pred             CCCeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcCC
Confidence              067899999999999999999999865555689999999998443

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.21  E-value=7.2e-11  Score=121.97  Aligned_cols=128  Identities=30%  Similarity=0.529  Sum_probs=86.0

Q ss_pred             EEEEEEeeccccCcceee-eeceeecccCCCCCCccCCC---------ccccCCCccccceEEeCCccccCCCCCCceEE
Q 012891          207 VELVLSFAEAAKGCTKHV-SFDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI  276 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v-~~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~  276 (454)
                      .++.++....+.-|.-.- .-.....|+.|+|+|.....         ...+|+.|+|.|.+.    ...|+.|+|.|.+
T Consensus       156 ~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~v  231 (397)
T PRK14281        156 KTLKIKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVV----KDRCPACYGEGIK  231 (397)
T ss_pred             EEEEEEeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeee----CCCCCCCCCCccE
Confidence            445555555543332211 11235689999999975321         256899999999883    5679999999987


Q ss_pred             eeeecccccCC-ceeeceE-------------------------------------------------------------
Q 012891          277 IKDHCMTCKGS-GVVDGVK-------------------------------------------------------------  294 (454)
Q Consensus       277 ~~~~C~~C~g~-G~~~~~~-------------------------------------------------------------  294 (454)
                      .+..-.+.... |+..+.+                                                             
T Consensus       232 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld  311 (397)
T PRK14281        232 QGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLD  311 (397)
T ss_pred             ecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCC
Confidence            54222222211 1111111                                                             


Q ss_pred             -EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891          295 -EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP  338 (454)
Q Consensus       295 -~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~  338 (454)
                       .++|.||+|+++|++++|+|+|.+...+...|||||+|+|.-..
T Consensus       312 g~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~  356 (397)
T PRK14281        312 GAVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPK  356 (397)
T ss_pred             ccEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEEcCC
Confidence             57899999999999999999999865555679999999999443

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.21  E-value=6.5e-11  Score=121.64  Aligned_cols=129  Identities=26%  Similarity=0.540  Sum_probs=86.5

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (454)
                      .++.++....+.-|.-.-.  -.....|+.|+|+|....         ....+|+.|+|+|.+    +...|..|+|.|.
T Consensus       139 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~  214 (380)
T PRK14276        139 KEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKE----IKEPCQTCHGTGH  214 (380)
T ss_pred             EEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCcc----ccCCCCCCCCceE
Confidence            3445554544433322211  123467999999997532         125689999999987    3578999999998


Q ss_pred             EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891          276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------  294 (454)
Q Consensus       276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------  294 (454)
                      +.+..-.++... |+..+.+                                                            
T Consensus       215 ~~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tl  294 (380)
T PRK14276        215 EKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTV  294 (380)
T ss_pred             EEEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcC
Confidence            654322222211 1111111                                                            


Q ss_pred             --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCc
Q 012891          295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI  339 (454)
Q Consensus       295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~  339 (454)
                        .++|.||+|+++|++++|+|+|++...+..+|||||+|+|.-...
T Consensus       295 dg~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~  341 (380)
T PRK14276        295 HGDVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNIVTPTK  341 (380)
T ss_pred             CCcEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCC
Confidence              578999999999999999999998755556799999999995543

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.21  E-value=7.4e-11  Score=121.58  Aligned_cols=128  Identities=28%  Similarity=0.548  Sum_probs=86.7

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (454)
                      ..+.++....+.-|.-+-.  -.....|+.|+|+|....     ....+|+.|+|+|.+.    ...|..|+|.|.+.+.
T Consensus       166 ~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i----~~~C~~C~G~g~v~~~  241 (392)
T PRK14279        166 MPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSII----EDPCEECKGTGVTTRT  241 (392)
T ss_pred             EEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEe----CCcCCCCCCCeEEEEe
Confidence            3455555555543333222  123478999999997532     1357999999999984    5679999999987542


Q ss_pred             ecccccCC-ceeeceE--------------------------------------------------------------EE
Q 012891          280 HCMTCKGS-GVVDGVK--------------------------------------------------------------EV  296 (454)
Q Consensus       280 ~C~~C~g~-G~~~~~~--------------------------------------------------------------~~  296 (454)
                      .-.+.... |+..+.+                                                              ++
T Consensus       242 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i  321 (392)
T PRK14279        242 RTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPV  321 (392)
T ss_pred             eeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceE
Confidence            21111111 1111000                                                              57


Q ss_pred             EEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCc
Q 012891          297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI  339 (454)
Q Consensus       297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~  339 (454)
                      +|.||+|+++|++++|+|+|++.. +...|||||+|+|.-+..
T Consensus       322 ~v~Ip~g~~~g~~iri~g~G~p~~-~~~~GDL~I~~~v~~P~~  363 (392)
T PRK14279        322 GVKVPAGTADGRILRVRGRGVPKR-SGGAGDLLVTVKVAVPPN  363 (392)
T ss_pred             EEEECCCCCCCCEEEECCCCCCCC-CCCCCCEEEEEEEECCCC
Confidence            899999999999999999999863 456899999999996543

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.20  E-value=3.5e-11  Score=123.24  Aligned_cols=133  Identities=26%  Similarity=0.447  Sum_probs=87.7

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (454)
                      ..+.++....+.-|.-.-.  -.....|+.|+|+|....     ....+|+.|+|+|.+.    ...|+.|+|.|.+.+.
T Consensus       143 k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~~~~~  218 (372)
T PRK14286        143 YKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVI----SNPCKTCGGQGLQEKR  218 (372)
T ss_pred             EEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEe----cccCCCCCCCcEEecc
Confidence            3455555555543333221  123467999999996422     2356899999999884    5679999999987431


Q ss_pred             ecc--------------cccCCce------------eece--------------------------------------EE
Q 012891          280 HCM--------------TCKGSGV------------VDGV--------------------------------------KE  295 (454)
Q Consensus       280 ~C~--------------~C~g~G~------------~~~~--------------------------------------~~  295 (454)
                      .=.              ...|.|.            +.-.                                      +.
T Consensus       219 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~  298 (372)
T PRK14286        219 RTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKK  298 (372)
T ss_pred             eEEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCE
Confidence            111              1111111            0000                                      05


Q ss_pred             EEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCccccc
Q 012891          296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRD  343 (454)
Q Consensus       296 ~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~  343 (454)
                      ++|.||+|+++|++++|+|+|.+...+...|||||+|+|.-+..+..+
T Consensus       299 i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~  346 (372)
T PRK14286        299 AKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRR  346 (372)
T ss_pred             EEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHH
Confidence            889999999999999999999986555567999999999966544433

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.20  E-value=9.2e-11  Score=120.37  Aligned_cols=129  Identities=26%  Similarity=0.538  Sum_probs=86.2

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (454)
                      .++.++....+..|.-.-.  -.....|+.|+|+|....         ....+|+.|+|.|.+    +...|+.|+|.|.
T Consensus       136 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~  211 (376)
T PRK14280        136 KEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQE----IKEKCPTCHGKGK  211 (376)
T ss_pred             eEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCce----ecCCCCCCCCceE
Confidence            3455555555544433222  123467999999996421         135699999999987    3567999999998


Q ss_pred             EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891          276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------  294 (454)
Q Consensus       276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------  294 (454)
                      +.+..-..+... |+..+.+                                                            
T Consensus       212 v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl  291 (376)
T PRK14280        212 VRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTL  291 (376)
T ss_pred             EEEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecC
Confidence            643211111110 1110000                                                            


Q ss_pred             --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCc
Q 012891          295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI  339 (454)
Q Consensus       295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~  339 (454)
                        .++|.||+|+++|++++|+|+|.+...+...|||||+|+|.....
T Consensus       292 dg~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~  338 (376)
T PRK14280        292 HGKVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRVVTPTK  338 (376)
T ss_pred             CceEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCC
Confidence              578999999999999999999998654556899999999995543

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.19  E-value=4.6e-11  Score=122.56  Aligned_cols=118  Identities=25%  Similarity=0.468  Sum_probs=85.6

Q ss_pred             eecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceEEeeeeccccc--------------
Q 012891          229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCK--------------  285 (454)
Q Consensus       229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~--------------  285 (454)
                      ...|+.|+|+|....         .....|+.|+|.|.+    +...|..|.|.|.+.+..=.++.              
T Consensus       160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~  235 (374)
T PRK14293        160 PTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQV----IEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVS  235 (374)
T ss_pred             CeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeE----eccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEc
Confidence            467999999997431         124689999999997    35679999999976432111111              


Q ss_pred             CCceee------ceE-------------------------------------------EEEEEecCccCCCCEEEECCCc
Q 012891          286 GSGVVD------GVK-------------------------------------------EVKVTIPAGVDSGDTIRVPEAG  316 (454)
Q Consensus       286 g~G~~~------~~~-------------------------------------------~~~V~Ip~G~~~G~~i~~~g~G  316 (454)
                      |.|...      +.-                                           .++|.||+|+++|++++|+|+|
T Consensus       236 g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~g~G  315 (374)
T PRK14293        236 GEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENKG  315 (374)
T ss_pred             cCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCCEEEECCCC
Confidence            111100      000                                           5789999999999999999999


Q ss_pred             CCCCCC-CCCccEEEEEEEecCCcccccCCCeEEE
Q 012891          317 NAGGRG-RQHGNLFIKLKVADDPIFSRDGADVYVD  350 (454)
Q Consensus       317 ~~~~~g-~~~GDL~v~i~v~~h~~f~R~G~DL~~~  350 (454)
                      .+...+ ...|||||+|+|..++.+.+++.+|+-.
T Consensus       316 ~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~  350 (374)
T PRK14293        316 VPRLGNPVARGDHLITVKVKIPTRISDEERELLEK  350 (374)
T ss_pred             CCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            986433 3579999999999988888888777654

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.18  E-value=9.5e-11  Score=120.79  Aligned_cols=127  Identities=24%  Similarity=0.496  Sum_probs=87.9

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCCC---------ccccCCCccccceEEeCCccccCCCCCCceE
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (454)
                      ..+.++....+..|...-.  -.....|+.|+|+|.....         ....|+.|+|+|.+    ....|..|+|+|.
T Consensus       147 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~  222 (386)
T PRK14289        147 KKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKI----IKKKCKKCGGEGI  222 (386)
T ss_pred             EEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccc----cCcCCCCCCCCcE
Confidence            4555666666655544332  2345789999999975421         25689999999987    3567999999998


Q ss_pred             Eeeeeccccc--------------CCceee------ceE-----------------------------------------
Q 012891          276 IIKDHCMTCK--------------GSGVVD------GVK-----------------------------------------  294 (454)
Q Consensus       276 ~~~~~C~~C~--------------g~G~~~------~~~-----------------------------------------  294 (454)
                      +.+..-.+..              |.|...      +.-                                         
T Consensus       223 v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~l  302 (386)
T PRK14289        223 VYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTI  302 (386)
T ss_pred             EeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecC
Confidence            6432111111              111100      000                                         


Q ss_pred             --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecC
Q 012891          295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD  337 (454)
Q Consensus       295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h  337 (454)
                        .++|.||+|+++|++++|+|+|.+...+...|||||+|+|+-.
T Consensus       303 dg~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P  347 (386)
T PRK14289        303 DGKAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYIP  347 (386)
T ss_pred             CceEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEEEEEEEeC
Confidence              6789999999999999999999986555678999999999943

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.17  E-value=1.2e-10  Score=119.85  Aligned_cols=128  Identities=27%  Similarity=0.498  Sum_probs=87.3

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (454)
                      .++.++....+.-|.-.-.  -.....|+.|+|+|....         ....+|+.|+|.|.+    +...|..|+|.|.
T Consensus       141 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~  216 (380)
T PRK14297        141 KEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKV----IEDPCNKCHGKGK  216 (380)
T ss_pred             EEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceE----cCCCCCCCCCCeE
Confidence            3455555555543333221  112567999999996531         235699999999987    3578999999997


Q ss_pred             EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891          276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------  294 (454)
Q Consensus       276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------  294 (454)
                      +.+..-...... |+..+.+                                                            
T Consensus       217 v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~l  296 (380)
T PRK14297        217 VRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTV  296 (380)
T ss_pred             EEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcC
Confidence            644322222221 2211111                                                            


Q ss_pred             --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891          295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP  338 (454)
Q Consensus       295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~  338 (454)
                        .++|.||+|+++|++++|+|+|.+...+...|||||+|+|.-..
T Consensus       297 dg~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~  342 (380)
T PRK14297        297 DGEVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVTVIVDIPK  342 (380)
T ss_pred             CCcEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEEEEEEcCC
Confidence              57899999999999999999999865555689999999999443

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.17  E-value=7.4e-11  Score=120.99  Aligned_cols=135  Identities=24%  Similarity=0.487  Sum_probs=90.0

Q ss_pred             EEEEEeeccccCcce---eeeeceeecccCCCCCCccCCC---------ccccCCCccccceEEeCCccccCCCCCCceE
Q 012891          208 ELVLSFAEAAKGCTK---HVSFDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (454)
Q Consensus       208 ~l~itlee~~~G~~k---~v~~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (454)
                      ++.++-...+..|..   .........|..|.|+|.....         ...+|+.|+|.|..    +...|..|.|+|.
T Consensus       133 ~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~  208 (371)
T PRK14292        133 EVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQI----ITDPCTVCRGRGR  208 (371)
T ss_pred             EEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCccccee----cCCCCCCCCCceE
Confidence            444444444443332   2222335789999999975421         24689999999987    4678999999997


Q ss_pred             Eeeeecc--------------cccCCce----------eec-eE------------------------------------
Q 012891          276 IIKDHCM--------------TCKGSGV----------VDG-VK------------------------------------  294 (454)
Q Consensus       276 ~~~~~C~--------------~C~g~G~----------~~~-~~------------------------------------  294 (454)
                      +....=.              ...|.|.          +.- .+                                    
T Consensus       209 v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG  288 (371)
T PRK14292        209 TLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDG  288 (371)
T ss_pred             EeecceEEEEECCCCCCCcEEEEecCcCCCCCCCCCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCC
Confidence            6432111              1112111          000 00                                    


Q ss_pred             EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCC
Q 012891          295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGAD  346 (454)
Q Consensus       295 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~D  346 (454)
                      ..+|.||+|+++|++++|+|+|++...+..+|||||+|+|..++.+..+...
T Consensus       289 ~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~  340 (371)
T PRK14292        289 PQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEARE  340 (371)
T ss_pred             CEEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHH
Confidence            3579999999999999999999987656678999999999988776554433

>PHA02624 large T antigen; Provisional

Probab=99.16  E-value=2.6e-11  Score=128.06  Aligned_cols=60  Identities=28%  Similarity=0.557  Sum_probs=56.1

Q ss_pred             CCCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhh
Q 012891           81 KRDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY  144 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~y  144 (454)
                      ..++|++|||+++|  +.+|||+|||++|++||||++++    +++|++|++||++|+|+.+|..|
T Consensus        10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd----eekfk~Ln~AYevL~d~~k~~r~   71 (647)
T PHA02624         10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD----EEKMKRLNSLYKKLQEGVKSARQ   71 (647)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc----HHHHHHHHHHHHHHhcHHHhhhc
Confidence            46899999999999  99999999999999999999753    57999999999999999999998

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.15  E-value=1.5e-10  Score=119.27  Aligned_cols=127  Identities=28%  Similarity=0.537  Sum_probs=85.1

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (454)
                      .++.++-...+.-|.-.-.  -.....|+.|+|+|....     ....+|+.|+|+|.+.    ...|..|.|.|.+.+.
T Consensus       159 k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~~~~~  234 (389)
T PRK14295        159 VPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIA----DDPCLVCKGSGRAKSS  234 (389)
T ss_pred             EEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEe----ccCCCCCCCCceEeee
Confidence            3455555555543433221  123468999999986432     2356999999999983    5689999999976432


Q ss_pred             ecccccCC-ceeeceE---------------------------------------------------------------E
Q 012891          280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E  295 (454)
Q Consensus       280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~  295 (454)
                      .-.+.... |+..+.+                                                               +
T Consensus       235 ~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~  314 (389)
T PRK14295        235 RTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPP  314 (389)
T ss_pred             eEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCE
Confidence            11111111 1111100                                                               6


Q ss_pred             EEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891          296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP  338 (454)
Q Consensus       296 ~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~  338 (454)
                      ++|.||+|+++|++++|+|+|++.. ++..|||||+|+|.-..
T Consensus       315 ~~v~ip~g~~~g~~iri~G~G~p~~-~~~~GDL~i~~~v~~P~  356 (389)
T PRK14295        315 VTVKLPPGTPNGRVLRVRGKGAVRK-DGTRGDLLVTVEVAVPK  356 (389)
T ss_pred             EEEEECCccCCCcEEEECCCCcCCC-CCCCCCEEEEEEEECCC
Confidence            8999999999999999999999863 45689999999999443

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.15  E-value=2.1e-10  Score=117.97  Aligned_cols=126  Identities=30%  Similarity=0.539  Sum_probs=85.3

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (454)
                      .++.++....+..|.-.-.  -.....|+.|+|+|....     ....+|+.|+|+|.+     ...|..|+|.|.+.+.
T Consensus       149 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~-----~~~C~~C~G~g~v~~~  223 (382)
T PRK14291        149 VSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVL-----REPCSKCNGRGLVIKK  223 (382)
T ss_pred             EEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceEE-----ccCCCCCCCCceEEee
Confidence            4455555555544433221  123567999999996532     235799999999953     4679999999976442


Q ss_pred             ecccccCC-ceeeceE---------------------------------------------------------------E
Q 012891          280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E  295 (454)
Q Consensus       280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~  295 (454)
                      .-.+.... |+..+.+                                                               .
T Consensus       224 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~  303 (382)
T PRK14291        224 ETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKK  303 (382)
T ss_pred             eEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCE
Confidence            22222211 1111111                                                               5


Q ss_pred             EEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecC
Q 012891          296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD  337 (454)
Q Consensus       296 ~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h  337 (454)
                      ++|.||+|+++|++++|+|+|++...+..+|||||+|+|.-.
T Consensus       304 l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P  345 (382)
T PRK14291        304 EKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVP  345 (382)
T ss_pred             EEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeC
Confidence            899999999999999999999987555568999999999844

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.14  E-value=2e-10  Score=118.24  Aligned_cols=128  Identities=29%  Similarity=0.550  Sum_probs=85.3

Q ss_pred             EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (454)
                      .+|.++....+.-|.-.-.  -.....|+.|+|+|....         ....+|+.|+|+|.+    +...|..|+|.|.
T Consensus       148 ~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~  223 (386)
T PRK14277        148 KEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKI----ITDPCNKCGGTGR  223 (386)
T ss_pred             EEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceee----ccCCCCCCCCCcE
Confidence            3455555555443322211  123468999999996431         124699999999998    3568999999998


Q ss_pred             EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891          276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------  294 (454)
Q Consensus       276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------  294 (454)
                      +.+..-.+.... |+..+.+                                                            
T Consensus       224 v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl  303 (386)
T PRK14277        224 IRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTL  303 (386)
T ss_pred             EeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcC
Confidence            744222222211 1111110                                                            


Q ss_pred             --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891          295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP  338 (454)
Q Consensus       295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~  338 (454)
                        .++|.||+|+++|++++|+|+|.+...+...|||||+|+|.-..
T Consensus       304 dG~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~V~~P~  349 (386)
T PRK14277        304 DGKVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVKVYIEVPK  349 (386)
T ss_pred             CCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCC
Confidence              46899999999999999999999865445679999999998443

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.13  E-value=2.5e-10  Score=116.94  Aligned_cols=128  Identities=20%  Similarity=0.479  Sum_probs=84.5

Q ss_pred             EEEEEEeeccccCcceeeee--ceeecccCCCCCCccCCC---------ccccCCCccccceEEeCCccccCCCCCCceE
Q 012891          207 VELVLSFAEAAKGCTKHVSF--DAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~~--~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (454)
                      ..+.++....+..|.-.-.-  .....|+.|+|+|.....         ...+|+.|+|+|.+    +...|+.|+|.|.
T Consensus       142 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~----~~~~C~~C~G~g~  217 (372)
T PRK14296        142 KIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKI----IKNKCKNCKGKGK  217 (372)
T ss_pred             EEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCccee----ecccccCCCCceE
Confidence            44555555555444433221  234679999999975422         24689999999998    3577999999997


Q ss_pred             EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891          276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------  294 (454)
Q Consensus       276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------  294 (454)
                      +.+..-.+.... |+..+.+                                                            
T Consensus       218 v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~t  297 (372)
T PRK14296        218 YLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKT  297 (372)
T ss_pred             EEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeC
Confidence            643211111110 1110000                                                            


Q ss_pred             ---EEEEEecCccCCCCEEEECCCcCCCC-CCCCCccEEEEEEEecCC
Q 012891          295 ---EVKVTIPAGVDSGDTIRVPEAGNAGG-RGRQHGNLFIKLKVADDP  338 (454)
Q Consensus       295 ---~~~V~Ip~G~~~G~~i~~~g~G~~~~-~g~~~GDL~v~i~v~~h~  338 (454)
                         .++|.||+|+++|++++|+|+|.+.. .+...|||||+|+|.-..
T Consensus       298 ldG~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~  345 (372)
T PRK14296        298 LDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPK  345 (372)
T ss_pred             CCCCEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence               57899999999999999999999733 234579999999999443

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=99.11  E-value=4.9e-11  Score=91.67  Aligned_cols=57  Identities=49%  Similarity=1.036  Sum_probs=44.9

Q ss_pred             ccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEe-eeecccccCCc
Q 012891          232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRII-KDHCMTCKGSG  288 (454)
Q Consensus       232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~-~~~C~~C~g~G  288 (454)
                      |+.|+|+|...+....+|+.|+|+|.++..        .++.+|+.|+|+|++| +++|+.|+|.|
T Consensus         1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g   66 (66)
T PF00684_consen    1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG   66 (66)
T ss_dssp             -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred             CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence            889999999999999999999999998642        2478999999999999 99999999976

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.10  E-value=3.8e-10  Score=116.93  Aligned_cols=108  Identities=27%  Similarity=0.565  Sum_probs=78.2

Q ss_pred             eeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCC-ceeeceE---
Q 012891          228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---  294 (454)
Q Consensus       228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---  294 (454)
                      ....|+.|+|+|....         ....+|+.|+|+|.+..  ....|..|+|.|.+.+..-.+.... |+..+.+   
T Consensus       165 ~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~--~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~  242 (421)
T PTZ00037        165 AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIP--ESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITF  242 (421)
T ss_pred             CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceecc--ccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEE
Confidence            4578999999996321         23569999999998742  2468999999998754332333322 2222111   


Q ss_pred             -----------------------------------------------------------EEEEEecCc--cCCCCEEEEC
Q 012891          295 -----------------------------------------------------------EVKVTIPAG--VDSGDTIRVP  313 (454)
Q Consensus       295 -----------------------------------------------------------~~~V~Ip~G--~~~G~~i~~~  313 (454)
                                                                                 .++|.||||  +++|++++|+
T Consensus       243 ~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~  322 (421)
T PTZ00037        243 HGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVIN  322 (421)
T ss_pred             ecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeC
Confidence                                                                       589999999  9999999999


Q ss_pred             CCcCCCCCC-CCCccEEEEEEEecC
Q 012891          314 EAGNAGGRG-RQHGNLFIKLKVADD  337 (454)
Q Consensus       314 g~G~~~~~g-~~~GDL~v~i~v~~h  337 (454)
                      |+|++...+ ...|||||+|+|.-.
T Consensus       323 geGmP~~~~~~~rGDL~V~~~V~~P  347 (421)
T PTZ00037        323 NEGMPTYKSPFKKGNLYVTFEVIFP  347 (421)
T ss_pred             CCCcccCCCCCCCCCEEEEEEEEcC
Confidence            999986443 357999999999843

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=99.10  E-value=1.4e-10  Score=105.76  Aligned_cols=68  Identities=26%  Similarity=0.419  Sum_probs=58.9

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891           82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (454)
Q Consensus        82 ~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~  149 (454)
                      .|||++||+++.  .+..+++++|++|++++|||+....+.     +.+.-..||+||.+|+||.+|+.|=-...
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~   76 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN   76 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence            599999999985  899999999999999999999876543     34456799999999999999999977533

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.09  E-value=2.5e-10  Score=117.33  Aligned_cols=105  Identities=32%  Similarity=0.601  Sum_probs=75.8

Q ss_pred             eecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccC-------------
Q 012891          229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKG-------------  286 (454)
Q Consensus       229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g-------------  286 (454)
                      ...|+.|.|+|....         ....+|+.|+|+|..    ....|..|+|+|.+.+..-..+..             
T Consensus       163 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~  238 (378)
T PRK14283        163 VKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKI----VEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVS  238 (378)
T ss_pred             CccCCCcCCccEEEEEEeccCceEEEEEECCCCCcccee----cCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEe
Confidence            467999999998531         124699999999987    356799999999864422222111             


Q ss_pred             -Cce------------eece-E------------------------------------EEEEEecCccCCCCEEEECCCc
Q 012891          287 -SGV------------VDGV-K------------------------------------EVKVTIPAGVDSGDTIRVPEAG  316 (454)
Q Consensus       287 -~G~------------~~~~-~------------------------------------~~~V~Ip~G~~~G~~i~~~g~G  316 (454)
                       .|.            +.-. +                                    +++|.||+|+++|++++|+|+|
T Consensus       239 g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ri~g~G  318 (378)
T PRK14283        239 GEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFRLKGHG  318 (378)
T ss_pred             ccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEEEECCCC
Confidence             110            0000 0                                    5789999999999999999999


Q ss_pred             CCCCCCCCCccEEEEEEEecC
Q 012891          317 NAGGRGRQHGNLFIKLKVADD  337 (454)
Q Consensus       317 ~~~~~g~~~GDL~v~i~v~~h  337 (454)
                      .+...+...|||||+|+|.-.
T Consensus       319 ~p~~~~~~~GdL~v~~~v~~P  339 (378)
T PRK14283        319 MPSLRWSGKGNLYVKVKVVVP  339 (378)
T ss_pred             CCCCCCCCCCCEEEEEEEEeC
Confidence            986544567999999999843

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.08  E-value=9e-11  Score=117.67  Aligned_cols=70  Identities=33%  Similarity=0.640  Sum_probs=63.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----ChhHHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-----NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSR  150 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~-----~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~  150 (454)
                      .-|||+||||+.+++..+||++||+|..++||||.++     ..+-++++.+|++||+.|+|...|..|-.||..
T Consensus        97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtP  171 (610)
T COG5407          97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTP  171 (610)
T ss_pred             CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCC
Confidence            4699999999999999999999999999999999875     135788999999999999999999999999754

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=99.00  E-value=5.4e-10  Score=100.66  Aligned_cols=57  Identities=26%  Similarity=0.435  Sum_probs=49.1

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCCCCCh-----hHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891           93 NASQDEIKKAFHMLAKQYHPDANKNNP-----SAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (454)
Q Consensus        93 ~a~~~eIk~ayr~la~~~HPD~~~~~~-----~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~  149 (454)
                      +.+..+|+++||+|++++|||+..+..     .+.+.|+.||+||++|+||.+|+.|+....
T Consensus         2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~   63 (157)
T TIGR00714         2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH   63 (157)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence            357889999999999999999975433     266789999999999999999999998643

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.91  E-value=1.4e-09  Score=98.46  Aligned_cols=66  Identities=26%  Similarity=0.527  Sum_probs=59.4

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhc
Q 012891           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYD  145 (454)
Q Consensus        80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd  145 (454)
                      -+-|+|+||.|.++.+.++||+.||+|++..|||+|+++ +.|...|..|..||..|-|+..|..-+
T Consensus        51 fnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~  117 (250)
T KOG1150|consen   51 FNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL  117 (250)
T ss_pred             cccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            457999999999999999999999999999999999988 568899999999999999998554433

>PRK14299 chaperone protein DnaJ; Provisional

Probab=98.80  E-value=1.8e-08  Score=100.09  Aligned_cols=70  Identities=33%  Similarity=0.564  Sum_probs=62.5

Q ss_pred             ccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCC
Q 012891          340 FSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTA  417 (454)
Q Consensus       340 f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~  417 (454)
                      +.|+|+||++++.|+|.||++|++++| +++|+ ++|+||+|+.+|++++++|+|++.       |||||+|+|.-+..
T Consensus       125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------GDL~v~i~v~~h~~  195 (291)
T PRK14299        125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------GDLYLVVRLLPHPV  195 (291)
T ss_pred             CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------CCEEEEEEEcCCCC
Confidence            357899999999999999999999998 67774 799999999999999999999872       99999999886544

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=98.72  E-value=7.4e-09  Score=97.88  Aligned_cols=74  Identities=34%  Similarity=0.423  Sum_probs=64.0

Q ss_pred             CCCCCCCCCcccccCCCC---CCCHHHHHHHHHHHHHHhCCCCC--CCChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891           75 GSCYSSKRDPYELLGVPE---NASQDEIKKAFHMLAKQYHPDAN--KNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (454)
Q Consensus        75 ~~~~~~~~~~Y~iLgv~~---~a~~~eIk~ayr~la~~~HPD~~--~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~  148 (454)
                      ....+...|+|.+|||+.   .|++.+|.+|.++.+.+||||+.  +++-...+.|+.|+.||+||+|+.+|.+||..-
T Consensus        36 d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d  114 (379)
T COG5269          36 DFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSND  114 (379)
T ss_pred             hhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence            445577799999999987   68999999999999999999996  223345789999999999999999999999863

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.62  E-value=1.4e-07  Score=94.40  Aligned_cols=74  Identities=26%  Similarity=0.505  Sum_probs=60.9

Q ss_pred             ccCCCeEEEEeeCHHHHhCCCEEEE----eCCC--C--------EEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEE
Q 012891          342 RDGADVYVDSNISFTQAILGGKVDV----PTLS--G--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQY  407 (454)
Q Consensus       342 R~G~DL~~~~~Isl~eAllG~~~~i----~tld--G--------~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~  407 (454)
                      ++|.||++++.|+|.||+.|+..+|    ++++  |        .++|+||+|+++|++++++|+|+|.... ..+||||
T Consensus       115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~  193 (306)
T PRK10266        115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENG-GPNGDLW  193 (306)
T ss_pred             CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCC-CCCccEE
Confidence            5789999999999999999996544    4444  3        3688999999999999999999996522 2469999


Q ss_pred             EEEEEECCCC
Q 012891          408 VRFRVNFPTA  417 (454)
Q Consensus       408 v~~~V~~P~~  417 (454)
                      |+|+|. |..
T Consensus       194 v~i~v~-ph~  202 (306)
T PRK10266        194 LVIHIA-PHP  202 (306)
T ss_pred             EEEEEc-CCC
Confidence            999999 653

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=98.55  E-value=1.3e-07  Score=75.68  Aligned_cols=45  Identities=29%  Similarity=0.608  Sum_probs=35.3

Q ss_pred             EEEEEEecCccCCCCEEEECCCcCCCCCCC-CCccEEEEEEEecCC
Q 012891          294 KEVKVTIPAGVDSGDTIRVPEAGNAGGRGR-QHGNLFIKLKVADDP  338 (454)
Q Consensus       294 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~-~~GDL~v~i~v~~h~  338 (454)
                      ++++|.||+|+++|+.++++|+|.+...+. ..|||||+++|.-..
T Consensus        27 ~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~   72 (81)
T PF01556_consen   27 KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPK   72 (81)
T ss_dssp             -EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--S
T ss_pred             CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence            577899999999999999999999765554 799999999998443

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=98.36  E-value=3.3e-07  Score=77.08  Aligned_cols=55  Identities=40%  Similarity=0.929  Sum_probs=45.7

Q ss_pred             eeecccCCCCCCccCCCccccCCCccccceEEeC-----CccccCCCCCCceEEeeeecccccCCceee
Q 012891          228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP-----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVD  291 (454)
Q Consensus       228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~  291 (454)
                      ..+.|..|+|+|.      .+|+.|+|+|.+...     ....+|+.|+|+|+.   .|..|.|.|++.
T Consensus        40 ~~v~C~~C~GsG~------~~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~---~C~~C~G~G~~~   99 (111)
T PLN03165         40 NTQPCFPCSGTGA------QVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL---TCTTCQGSGIQP   99 (111)
T ss_pred             cCCCCCCCCCCCC------cCCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee---eCCCCCCCEEEe
Confidence            4578999999997      389999999987542     236789999999975   499999999764

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.34  E-value=9.1e-07  Score=88.01  Aligned_cols=43  Identities=33%  Similarity=0.449  Sum_probs=37.9

Q ss_pred             EEEEEecCc--cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891          295 EVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP  338 (454)
Q Consensus       295 ~~~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~  338 (454)
                      .+++.++||  +.+|++.+++|+|++..... .|||||.+.|+-.+
T Consensus       280 ~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~-~g~lyi~~~v~fp~  324 (337)
T KOG0712|consen  280 LLKLSSKPGEVISPGDTKRVEGEGMPIFRNP-KGDLYIKFEVKFPK  324 (337)
T ss_pred             eEEEecCCCceeChhHEEeecCCCcccccCC-CCcEEEEEEEEcCC
Confidence            688999999  99999999999999987555 99999999999443

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.29  E-value=8e-07  Score=97.13  Aligned_cols=58  Identities=29%  Similarity=0.477  Sum_probs=49.0

Q ss_pred             CCCCCCCCcccccCCCCC----CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhh
Q 012891           76 SCYSSKRDPYELLGVPEN----ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR  136 (454)
Q Consensus        76 ~~~~~~~~~Y~iLgv~~~----a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~  136 (454)
                      +..++..+.|+||.|+-+    -..+.||++|++||.+||||||+   +..++|..+|+|||.|+
T Consensus      1275 P~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1275 PATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLS 1336 (2235)
T ss_pred             CCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHH
Confidence            445566789999999753    23478999999999999999995   56899999999999999

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.27  E-value=7.6e-07  Score=82.59  Aligned_cols=57  Identities=37%  Similarity=0.683  Sum_probs=50.4

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHH-hhhhh
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYE-TLRDS  138 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~-vL~d~  138 (454)
                      -+.+|.+|||..+|+.+|++.||..||+++|||...+. ...++|.+|.+||. ||+..
T Consensus        46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~-adaa~f~qideafrkvlq~~  103 (342)
T KOG0568|consen   46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEE-ADAARFIQIDEAFRKVLQEK  103 (342)
T ss_pred             HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCcc-ccHHHHHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999988653 44578999999998 88754

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=98.07  E-value=4.1e-06  Score=76.96  Aligned_cols=48  Identities=35%  Similarity=0.663  Sum_probs=41.3

Q ss_pred             ccCCCCCCceEEee--eecccccCCceeeceEEEEEEecCccCCCCEEEEC
Q 012891          265 STCSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP  313 (454)
Q Consensus       265 ~~C~~C~G~G~~~~--~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~  313 (454)
                      .+|+.|+|+|++++  .+|+.|+|.|.+..++.+.+.+ .|+.+|++|++.
T Consensus       100 ~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~  149 (186)
T TIGR02642       100 CKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK  149 (186)
T ss_pred             CcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence            46777777787776  6899999999999999999999 999999999875

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.77  E-value=2.9e-05  Score=63.81  Aligned_cols=58  Identities=28%  Similarity=0.394  Sum_probs=48.2

Q ss_pred             CCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhh
Q 012891           77 CYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS  138 (454)
Q Consensus        77 ~~~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~  138 (454)
                      +.+..+..-.||||++.++.+.||.|+|+.....|||+.+. |-   .=.+||||+++|...
T Consensus        51 ~kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGS-PY---lAsKINEAKdlLe~~  108 (112)
T KOG0723|consen   51 PKMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGS-PY---LASKINEAKDLLEGT  108 (112)
T ss_pred             cccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCC-HH---HHHHHHHHHHHHhcc
Confidence            34556777889999999999999999999999999999974 42   123699999999754

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=97.66  E-value=0.00017  Score=78.14  Aligned_cols=70  Identities=50%  Similarity=0.816  Sum_probs=65.4

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCC
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS  152 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~  152 (454)
                      .|||+||||+++|+.++||+|||+||++||||++++ +.+.++|++|++||++|+||.+|+.||.++..+.
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~   71 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGV   71 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence            599999999999999999999999999999999975 7788899999999999999999999999876553

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=97.56  E-value=8.4e-05  Score=65.35  Aligned_cols=69  Identities=26%  Similarity=0.456  Sum_probs=55.0

Q ss_pred             CCCCCcccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCCh-----hHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891           79 SSKRDPYELLGVPE--NASQDEIKKAFHMLAKQYHPDANKNNP-----SAKRKFQEIRDAYETLRDSEKRAQYDRR  147 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~--~a~~~eIk~ayr~la~~~HPD~~~~~~-----~a~~~f~~i~~Ay~vL~d~~~r~~yd~~  147 (454)
                      ....+||.++|...  ..++.-++.-|--..+++|||+.....     .|.+...++|+||.+|.||.+|+.|=.-
T Consensus         5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilk   80 (168)
T KOG3192|consen    5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLK   80 (168)
T ss_pred             chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            34578999997654  556666777899999999999854321     3677899999999999999999999764

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=97.46  E-value=8.3e-05  Score=77.81  Aligned_cols=45  Identities=13%  Similarity=0.225  Sum_probs=22.1

Q ss_pred             CCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891          380 GVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE  432 (454)
Q Consensus       380 ~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~  432 (454)
                      .+..|+++.|-|+=-+.      .|+|-|++.  ==+.|+..+....++-...
T Consensus       258 ~IevGdiV~ViG~V~~r------~g~lQiE~~--~me~L~G~ea~eVr~rid~  302 (715)
T COG1107         258 EIEVGDIVEVIGEVTRR------DGRLQIEIE--AMEKLTGDEAAEVRKRIDE  302 (715)
T ss_pred             CCCCCceEEEEEEEeec------CCcEEEeeh--hhHHhhCchHHHHHHHHHH
Confidence            35566666666653221      366655542  1245665554444444333

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=97.34  E-value=0.00011  Score=56.38  Aligned_cols=44  Identities=32%  Similarity=0.778  Sum_probs=31.8

Q ss_pred             eeecccCCCCCCccCCC---------ccccCCCccccceEEeCCccccCCCCCCce
Q 012891          228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLG  274 (454)
Q Consensus       228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G  274 (454)
                      ....|+.|+|+|.....         ...+|+.|+|+|.++   ....|+.|+|.|
T Consensus        14 ~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i---~~~~C~~C~G~g   66 (66)
T PF00684_consen   14 KPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII---EKDPCKTCKGSG   66 (66)
T ss_dssp             T-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE----TSSB-SSSTTSS
T ss_pred             CCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE---CCCCCCCCCCcC
Confidence            34689999999987432         357999999999983   278999999986

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=96.56  E-value=0.0018  Score=68.09  Aligned_cols=24  Identities=38%  Similarity=1.031  Sum_probs=11.5

Q ss_pred             ccCCCCCCceEEe-eeecccccCCc
Q 012891          265 STCSTCKGLGRII-KDHCMTCKGSG  288 (454)
Q Consensus       265 ~~C~~C~G~G~~~-~~~C~~C~g~G  288 (454)
                      .+|+.|.|+|.+. -..|..|.|.|
T Consensus        54 ~pc~~c~gkG~V~v~~~c~~c~G~g   78 (715)
T COG1107          54 IPCPKCRGKGTVTVYDTCPECGGTG   78 (715)
T ss_pred             CCCCeeccceeEEEEeecccCCCce
Confidence            3455555555442 34555555544

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=96.50  E-value=0.0019  Score=54.54  Aligned_cols=41  Identities=34%  Similarity=0.764  Sum_probs=32.2

Q ss_pred             cccCCCCCCccCC------CccccCCCccccceEEeCCccccCCCCCCceEEee
Q 012891          231 PCDSCHGRGFPAD------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK  278 (454)
Q Consensus       231 ~C~~C~G~G~~~~------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~  278 (454)
                      .|+.|+|+|....      .....|+.|+|.|+.       .|..|.|+|.+.+
T Consensus        54 ~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~-------~C~~C~G~G~~~~  100 (111)
T PLN03165         54 VCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL-------TCTTCQGSGIQPR  100 (111)
T ss_pred             CCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee-------eCCCCCCCEEEee
Confidence            7999999987532      125689999999974       3999999998764

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.37  E-value=0.0029  Score=58.11  Aligned_cols=69  Identities=32%  Similarity=0.526  Sum_probs=53.7

Q ss_pred             CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891           83 DPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (454)
Q Consensus        83 ~~Y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g  151 (454)
                      +|+..+|..+.+  ..+.++..|+.+++.||||+....+.     +.+.+..++.||.+|.||.+|+.|=..-..|
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g   77 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADG   77 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhccc
Confidence            455666666644  44568999999999999999875543     3457889999999999999999998764433

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=96.19  E-value=0.0046  Score=60.51  Aligned_cols=31  Identities=39%  Similarity=0.867  Sum_probs=18.3

Q ss_pred             cCCCCCCceEEeeeecccccCCceeeceEEEEEE
Q 012891          266 TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT  299 (454)
Q Consensus       266 ~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~  299 (454)
                      .|++|.|.|.   .+|.+|.|.|-+..-..+.|.
T Consensus       247 ~C~tC~grG~---k~C~TC~gtgsll~~t~~vV~  277 (406)
T KOG2813|consen  247 ECHTCKGRGK---KPCTTCSGTGSLLNYTRIVVY  277 (406)
T ss_pred             cCCcccCCCC---cccccccCccceeeeEEEEEE
Confidence            4666666654   478888887765444444433

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.12  E-value=0.003  Score=57.97  Aligned_cols=54  Identities=43%  Similarity=0.632  Sum_probs=46.5

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--Ch-----hHHHHHHHHHHHHHhh
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN--NP-----SAKRKFQEIRDAYETL  135 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~--~~-----~a~~~f~~i~~Ay~vL  135 (454)
                      .+.|.+|++...++..+|+++|+++...+|||+-..  .+     .+.+++++|++||+.+
T Consensus       113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999998532  22     3778899999999753

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=95.45  E-value=0.015  Score=61.11  Aligned_cols=47  Identities=19%  Similarity=0.399  Sum_probs=36.1

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-------hHHHHHHHHHHHHHhh
Q 012891           89 GVPENASQDEIKKAFHMLAKQYHPDANKNNP-------SAKRKFQEIRDAYETL  135 (454)
Q Consensus        89 gv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL  135 (454)
                      .+..=.+.++||||||+..+..||||.++.+       -+++.|..+++||+..
T Consensus       395 sltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f  448 (453)
T KOG0431|consen  395 SLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF  448 (453)
T ss_pred             chhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence            4444568999999999999999999987653       1566677777777643

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=95.23  E-value=0.016  Score=53.48  Aligned_cols=28  Identities=39%  Similarity=0.910  Sum_probs=13.5

Q ss_pred             cCCCccccceEEeCCccccCCCCCCceEEe
Q 012891          248 ICSTCRGIGRVTIPPFTSTCSTCKGLGRII  277 (454)
Q Consensus       248 ~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~  277 (454)
                      +|+.|+|+|.+...  ..+|+.|+|+|++.
T Consensus       101 ~C~~C~G~G~~i~~--~~~C~~C~G~G~v~  128 (186)
T TIGR02642       101 KCPRCRGTGLIQRR--QRECDTCAGTGRFR  128 (186)
T ss_pred             cCCCCCCeeEEecC--CCCCCCCCCccEEe
Confidence            45555555544211  13466666666553

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=94.35  E-value=0.025  Score=55.53  Aligned_cols=57  Identities=30%  Similarity=0.676  Sum_probs=34.9

Q ss_pred             ecccCCCCCCccC--CCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCCcee
Q 012891          230 VPCDSCHGRGFPA--DAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVV  290 (454)
Q Consensus       230 ~~C~~C~G~G~~~--~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~  290 (454)
                      ..|+.|+|.|...  ...+..|+.|-|.-.-. ......|..|+|+|.   ..|.+|.|.|..
T Consensus       199 ~vc~gc~g~G~~~y~~~~~m~c~sc~G~~~~k-~gt~~~C~~C~G~G~---~~C~tC~grG~k  257 (406)
T KOG2813|consen  199 MVCHGCSGSGSNSYGIGTPMHCMSCTGVPPPK-IGTHDLCYMCHGRGI---KECHTCKGRGKK  257 (406)
T ss_pred             eeccCcCCCCccccccCcceecccccCCCCCC-CCccchhhhccCCCc---ccCCcccCCCCc
Confidence            4566666666422  12355666666510000 012567999999996   479999999865

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=92.42  E-value=0.31  Score=42.23  Aligned_cols=59  Identities=24%  Similarity=0.277  Sum_probs=41.0

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhh
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR  141 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r  141 (454)
                      +.-..-..||||++.++.++|.+.|.+|-...+|++.+. .   =.=.+|..|.|.|....+.
T Consensus        55 Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS-f---YLQSKV~rAKErl~~El~~  113 (127)
T PF03656_consen   55 MTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGS-F---YLQSKVFRAKERLEQELKE  113 (127)
T ss_dssp             --HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS--H---HHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC-H---HHHHHHHHHHHHHHHHHHH
Confidence            344567899999999999999999999999999998863 1   1123788899998876643

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=86.20  E-value=0.81  Score=45.48  Aligned_cols=49  Identities=31%  Similarity=0.668  Sum_probs=36.0

Q ss_pred             eeceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEe
Q 012891          225 SFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII  277 (454)
Q Consensus       225 ~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~  277 (454)
                      .......|..|.|+|....     -...+|..|+|.|.+.    ...|..|.|.|.+.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~----~~~c~~~~g~~~v~  230 (288)
T KOG0715|consen  177 EGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVL----RDNCQACSGAGQVR  230 (288)
T ss_pred             cccccccchhhhCcccccccccCCcceeecccccccceec----cchHHHhhcchhhh
Confidence            3456789999999993221     1123799999999984    34499999999654

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=85.54  E-value=0.81  Score=44.51  Aligned_cols=36  Identities=31%  Similarity=0.915  Sum_probs=18.1

Q ss_pred             cCCCccccceEEeCCccccCCCCCCceEEee--------eecccccCCcee
Q 012891          248 ICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK--------DHCMTCKGSGVV  290 (454)
Q Consensus       248 ~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~--------~~C~~C~g~G~~  290 (454)
                      .|..|+|.+.+       +|..|+|+-++..        ..|..|+-.|.+
T Consensus       231 ~C~~CGg~rFl-------pC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLv  274 (281)
T KOG2824|consen  231 VCESCGGARFL-------PCSNCHGSCKVHEEEEDDGGVLRCLECNENGLV  274 (281)
T ss_pred             cCCCcCCcceE-------ecCCCCCceeeeeeccCCCcEEECcccCCCCce
Confidence            45555555544       3555555555443        355555555543

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=80.78  E-value=1.7  Score=38.83  Aligned_cols=23  Identities=39%  Similarity=0.892  Sum_probs=12.8

Q ss_pred             ecccCCCCCCccCCCccccCCCccccceE
Q 012891          230 VPCDSCHGRGFPADAKTKICSTCRGIGRV  258 (454)
Q Consensus       230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~  258 (454)
                      ..|..|.|.++      ..|..|+|+=++
T Consensus       100 ~~C~~Cgg~rf------v~C~~C~Gs~k~  122 (147)
T cd03031         100 GVCEGCGGARF------VPCSECNGSCKV  122 (147)
T ss_pred             CCCCCCCCcCe------EECCCCCCcceE
Confidence            34666666554      356666655544

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>PF14687 DUF4460: Domain of unknown function (DUF4460)

Probab=80.50  E-value=3.7  Score=34.84  Aligned_cols=47  Identities=17%  Similarity=0.345  Sum_probs=35.2

Q ss_pred             CCCCHHHHHHHHHHHHHHhCCCCCCCChhH----HHHHHHHHHHHHhhhhh
Q 012891           92 ENASQDEIKKAFHMLAKQYHPDANKNNPSA----KRKFQEIRDAYETLRDS  138 (454)
Q Consensus        92 ~~a~~~eIk~ayr~la~~~HPD~~~~~~~a----~~~f~~i~~Ay~vL~d~  138 (454)
                      +..+..+++.|.|.+-++.|||.....|++    ++-++.++.-.+.|..+
T Consensus         4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~   54 (112)
T PF14687_consen    4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKR   54 (112)
T ss_pred             hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhcc
Confidence            355778899999999999999998877753    34566666666666543

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=80.21  E-value=4.2  Score=37.99  Aligned_cols=39  Identities=31%  Similarity=0.434  Sum_probs=30.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhh
Q 012891           91 PENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD  137 (454)
Q Consensus        91 ~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d  137 (454)
                      +++||.+||.+|+.++..+|-     +|   ++.-.+|-.|||.+.=
T Consensus         1 S~~ASfeEIq~Arn~ll~~y~-----gd---~~~~~~IEaAYD~ILM   39 (194)
T PF11833_consen    1 SEDASFEEIQAARNRLLAQYA-----GD---EKSREAIEAAYDAILM   39 (194)
T ss_pred             CCCCCHHHHHHHHHHHHHHhc-----CC---HHHHHHHHHHHHHHHH
Confidence            578999999999999999983     23   3445579999976553

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	454
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		3e-20
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		2e-17
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		1e-14
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		2e-14
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		2e-14
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		4e-14
1nlt_A	248	The Crystal Structure Of Hsp40 Ydj1 Length = 248		4e-13
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		3e-12
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		3e-12
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		7e-12
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		8e-12
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		2e-11
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		3e-11
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		4e-11
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		4e-11
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		2e-09
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		2e-09
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		3e-09
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		8e-09
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		1e-08
3agz_A	190	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		2e-08
2qld_A	183	Human Hsp40 Hdj1 Length = 183		2e-08
3agx_A	181	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		2e-08
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		2e-07
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		3e-07
2ctt_A	104	Solution Structure Of Zinc Finger Domain From Human		4e-07
2y4t_A	450	Crystal Structure Of The Human Co-Chaperone P58(Ipk		2e-06
2y4u_A	450	Crystal Structure Of Human P58(Ipk) In Space Group		2e-06
3i38_A	109	Structure Of A Putative Chaperone Protein Dnaj From		3e-06
1exk_A	79	Solution Structure Of The Cysteine-Rich Domain Of T		7e-06
2qsa_A	109	Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2		2e-05
2b26_A	173	The Crystal Structure Of The Protein Complex Of Yea		2e-05
1c3g_A	170	S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 1		2e-05
1wjz_A	94	Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P		1e-04
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		5e-04
2q2g_A	180	Crystal Structure Of Dimerization Domain Of Hsp40 F		6e-04

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 155/368 (42%), Gaps = 70/368 (19%)
Query: 58  DFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN 117
           D GT  ++     +          +D Y +LGV        IK A+  LA++YHPD +K 
Sbjct: 12  DLGTENLYFQSNAMEL--------KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE 63
Query: 118 NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYA 177
           N  A+ KF+++ +A+E L+D       ++RR+      +Y     + +++  D  GF   
Sbjct: 64  N-DAEAKFKDLAEAWEVLKD-------EQRRA------EYD----QLWQHRNDP-GFGRQ 104
Query: 178 YQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHG 237
            QTH      + F +IF   +S F    Q         AA+G    +    F+       
Sbjct: 105 RQTHEQSYSQQDFDDIF---SSMFG---QQAHQRRRQHAARGHDLEIEVAVFL------- 151
Query: 238 RGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVK 297
                  +  +    R I    +P +          G I  +   T            + 
Sbjct: 152 -------EETLAEQTRTIS-YNLPVYNV-------FGMIESETPKT------------LN 184
Query: 298 VTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQ 357
           V IPAGV  G  IR+   G  G  G  +G+L++ + +A  P+F   G ++ +   ++  +
Sbjct: 185 VKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWE 244
Query: 358 AILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTA 417
           A LG KV VPTL   + + +P G Q GQ L ++GKGL         GD +   ++  PT 
Sbjct: 245 AALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFAVIKIVMPTK 301
Query: 418 LNERQRAI 425
            +E+ R +
Sbjct: 302 PDEKAREL 309

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 49/63 (77%)
Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           D Y++LGVP NASQ EIKKA++ LAK+YHPD NK++P AK KF ++ +AYE L D  KR 
Sbjct: 8   DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK 67
Query: 143 QYD 145
           QYD
Sbjct: 68  QYD 70

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/61 (59%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y++LGVP++AS+ +IKKAFH LA +YHPD NK +P A+ KF+EI +AYETL D+ +R +Y
Sbjct: 10  YDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEY 68
Query: 145 D 145
           D
Sbjct: 69  D 69

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D YE+LGV + A + EI+KA+  LA +YHPD N+ +  A+ KF+EI++AYE L DS+
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 140 KRAQYDR 146
           KRA YD+
Sbjct: 61  KRAAYDQ 67

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D YE+LGV + A + EI+KA+  LA +YHPD N+ +  A+ KF+EI++AYE L DS+
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 140 KRAQYDR 146
           KRA YD+
Sbjct: 61  KRAAYDQ 67

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D YE+LGV + A + EI+KA+  LA +YHPD N+ +  A+ KF+EI++AYE L DS+
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 140 KRAQYDR 146
           KRA YD+
Sbjct: 61  KRAAYDQ 67

>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1 Length = 248

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 20/227 (8%)
Query: 204 DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC--RGIGRVT-- 259
           DI+ E+  S  E  KG T  ++ +  + C  C GRG    A  K C++C  +GI  VT  
Sbjct: 13  DIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQ 71
Query: 260 ----IPPFTSTCSTCKGLGRII--KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP 313
               I  F + C  C G G II  KD C +C G  V +  K ++V +  G+  G  I   
Sbjct: 72  MGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFK 131
Query: 314 EAGNAGGRGRQHGNLFIKLKVADDP--IFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
              +          +FI   V++ P   F RDG D+  ++ I    AI GG+  +  +SG
Sbjct: 132 GEADQAPDVIPGDVVFI---VSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSG 188
Query: 372 ---KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415
              KV +   + + PG   V+ GKG+     +  +G+  ++F +  P
Sbjct: 189 DWLKVGIVPGEVIAPGMRKVIEGKGMPIP-KYGGYGNLIIKFTIKDP 234

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y LLGV + AS  EI++AF  LA + HPD N NNP+A   F +I  AYE L+D + R +Y
Sbjct: 24  YSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKY 83
Query: 145 DRRRSRGSENEKYSAGDAEGFRY 167
           D+   +G E+ +   G  E + Y
Sbjct: 84  DKYGEKGLEDNQ--GGQYESWSY 104

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           DPY +LGV   ASQ +IKKA+  LA+++HPD NK +P A+ +F +I  AYE L + EKR 
Sbjct: 18  DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNEEKRT 76
Query: 143 QYD 145
            YD
Sbjct: 77  NYD 79

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y LLGV + AS  EI++AF  LA + HPD N NNP+A   F +I  AYE L+D + R +Y
Sbjct: 5   YSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKY 64
Query: 145 DRRRSRGSENEKYSAGDAEGFRY 167
           D+   +G E+ +   G  E + Y
Sbjct: 65  DKYGEKGLEDNQ--GGQYESWSY 85

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 76  SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETL 135
           S  +S    Y +LG+ +NA+ D+IKK++  LA +YHPD N +NP A  KF+EI +A+  L
Sbjct: 11  SLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAIL 70
Query: 136 RDSEKRAQYDRRRSRG 151
            D+ KR  YD+  S G
Sbjct: 71  TDATKRNIYDKYGSLG 86

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRDSEKRAQ 143
           YE+L VP +AS D+IKKA+   A Q+HPD N +N   A++KF+E+ +AYE L D  KR  
Sbjct: 5   YEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREI 64
Query: 144 YDR 146
           YDR
Sbjct: 65  YDR 67

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y++LGV  NA+Q+E+KKA+  LA +YHPD    NP+   KF++I  AYE L D++KR  Y
Sbjct: 9   YDVLGVKPNATQEELKKAYRKLALKYHPD---KNPNEGEKFKQISQAYEVLSDAKKRELY 65
Query: 145 DR 146
           D+
Sbjct: 66  DK 67

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQ 143
           YE+LGV  +AS ++IKKA+  LA ++HPD N +N   A++KF+ + +AYE L DS+KR+ 
Sbjct: 12  YEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSL 71
Query: 144 YDR 146
           YDR
Sbjct: 72  YDR 74

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDAN-KNNPSAKRKFQEIRDAYETLRDSEKR 141
           D YE+L VP  AS + IKKA+  LA ++HPD N +N   A+R+F+++ +AYE L D++KR
Sbjct: 10  DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR 69
Query: 142 AQYDR 146
             YDR
Sbjct: 70  DIYDR 74

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
           +D Y+ LG+   AS +EIK+A+   A +YHPD NK  P A+ KF+EI +AY+ L D  KR
Sbjct: 3   KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKR 61
Query: 142 AQYDR 146
             +DR
Sbjct: 62  EIFDR 66

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
           S  +D Y ++GV        IK A+  LA++YHPD +K  P A+ +F+E+ +A+E L D 
Sbjct: 2   SELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDE 60
Query: 139 EKRAQYDR 146
           ++RA+YD+
Sbjct: 61  QRRAEYDQ 68

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S  D YE+LGV   AS +++KKA+  LA ++HPD N + P A   F+ I  AY  L + E
Sbjct: 5   SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKN-HAPGATEAFKAIGTAYAVLSNPE 63
Query: 140 KRAQYDR 146
           KR QYD+
Sbjct: 64  KRKQYDQ 70

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y++LGV  +AS +E+KKA+  +A ++HPD    NP    +F++I  AYE L D +KR  Y
Sbjct: 11  YDVLGVKPDASDNELKKAYRKMALKFHPD---KNPDGAEQFKQISQAYEVLSDEKKRQIY 67
Query: 145 DR 146
           D+
Sbjct: 68  DQ 69

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 75  GSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYET 134
           G C  S+   Y+LLGVP  A+Q +IK A++     YHPD N  +  A  +F  I  AY  
Sbjct: 10  GDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVV 69
Query: 135 LRDSEKRAQYDR 146
           L  +  R +YDR
Sbjct: 70  LGSATLRRKYDR 81

>pdb|3AGZ|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Complexed With A C-Terminal Peptide Of Hsp70 Length = 190

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 2/142 (1%)
Query: 286 GSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGA 345
           G  + +  K + + +  G   G  I  P+ G+          +F+ LK     IF RDG+
Sbjct: 44  GKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFV-LKDKPHNIFKRDGS 102
Query: 346 DVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHG 404
           DV   + IS  +A+ G  V+VPTL G+ + V     ++PG    + G+GL         G
Sbjct: 103 DVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRG 162
Query: 405 DQYVRFRVNFPTALNERQRAIL 426
           D  + F V FP  + +  R +L
Sbjct: 163 DLIIEFEVIFPERIPQTSRTVL 184

>pdb|2QLD|A Chain A, Human Hsp40 Hdj1 Length = 183

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 2/142 (1%)
Query: 286 GSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGA 345
           G  + +  K + + +  G   G  I  P+ G+          +F+ LK     IF RDG+
Sbjct: 37  GKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFV-LKDKPHNIFKRDGS 95
Query: 346 DVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHG 404
           DV   + IS  +A+ G  V+VPTL G+ + V     ++PG    + G+GL         G
Sbjct: 96  DVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRG 155
Query: 405 DQYVRFRVNFPTALNERQRAIL 426
           D  + F V FP  + +  R +L
Sbjct: 156 DLIIEFEVIFPERIPQTSRTVL 177

>pdb|3AGX|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Length = 181

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 2/142 (1%)
Query: 286 GSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGA 345
           G  + +  K + + +  G   G  I  P+ G+          +F+ LK     IF RDG+
Sbjct: 35  GKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFV-LKDKPHNIFKRDGS 93
Query: 346 DVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHG 404
           DV   + IS  +A+ G  V+VPTL G+ + V     ++PG    + G+GL         G
Sbjct: 94  DVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRG 153
Query: 405 DQYVRFRVNFPTALNERQRAIL 426
           D  + F V FP  + +  R +L
Sbjct: 154 DLIIEFEVIFPERIPQTSRTVL 175

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           D Y LLG  E +S ++I   F + A + HPD +  NP A   FQ+++ A E L + E RA
Sbjct: 21  DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80
Query: 143 QYDR-RRSRGS 152
           +YD  RRS+ S
Sbjct: 81  RYDHWRRSQMS 91

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y+LLGV  +A++ E+KK +   A +YHPD    +     KF+EI +A+E L D +KR  Y
Sbjct: 11  YDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIY 67
Query: 145 DR 146
           D+
Sbjct: 68  DQ 69

>pdb|2CTT|A Chain A, Solution Structure Of Zinc Finger Domain From Human Dnaj Subfamily A Menber 3 Length = 104

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 209 LVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--PFT-- 264
           + L+F +AAKG  K  + +    C+ C+G+G     K + C  C G G  TI   PF   
Sbjct: 8   MELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMR 67
Query: 265 STCSTCKGLGRIIKDHCMTCKGSG 288
           STC  C G G II   C+ C+G+G
Sbjct: 68  STCRRCGGRGSIIISPCVVCRGAG 91

>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---NPSAKRKFQEIRDAYETL 135
           S KRD Y++LGV  NA + EI KA+  LA Q+HPD  +N      A++KF +I  A E L
Sbjct: 379 SQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVL 438
Query: 136 RDSEKRAQYD 145
            D E R ++D
Sbjct: 439 SDPEMRKKFD 448

>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---NPSAKRKFQEIRDAYETL 135
           S KRD Y++LGV  NA + EI KA+  LA Q+HPD  +N      A++KF +I  A E L
Sbjct: 379 SQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVL 438
Query: 136 RDSEKRAQYD 145
            D E R ++D
Sbjct: 439 SDPEXRKKFD 448

>pdb|3I38|A Chain A, Structure Of A Putative Chaperone Protein Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 Length = 109

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 338 PIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKN 397
           P+F   G ++ +   ++  +A LG KV VPTL   + + +P G Q GQ L ++GKGL   
Sbjct: 5   PLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSK 64
Query: 398 GLFLDHGDQYVRFRVNFPTALNERQRAI 425
                 GD +   ++  PT  +E+ R +
Sbjct: 65  ---THTGDLFAVIKIVXPTKPDEKAREL 89

>pdb|1EXK|A Chain A, Solution Structure Of The Cysteine-Rich Domain Of The Escherichia Coli Chaperone Protein Dnaj Length = 79

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 221 TKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRI 276
           TK +       CD CHG G     + + C TC G G+V +         TC  C+G G +
Sbjct: 3   TKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL 62
Query: 277 IKDHCMTCKGSGVVD 291
           IKD C  C G G V+
Sbjct: 63  IKDPCNKCHGHGRVE 77

>pdb|2QSA|A Chain A, Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2 Precursor From C.Elegans Length = 109

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 78  YSSKRDPYELLGVP-ENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYE 133
           Y    + Y++L V  E   + ++ KA+  LA+++HPD  KN      A+ +F+ I  AYE
Sbjct: 11  YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYE 70
Query: 134 TLRDSEKRAQYD 145
           TL+D E +  YD
Sbjct: 71  TLKDDEAKTNYD 82

>pdb|2B26|A Chain A, The Crystal Structure Of The Protein Complex Of Yeast Hsp40 Sis1 And Hsp70 Ssa1 Length = 173

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNIS 354
           ++ + +  G  +G  I     G+   +  +   L   ++    P F RDG D+     +S
Sbjct: 37  QIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLS 96
Query: 355 FTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN 413
           F +++LG    + T+ G+ + +   + VQP Q     G+G+         G+  V+++V+
Sbjct: 97  FKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVD 156
Query: 414 FPTALNERQ-RAI 425
           +P +LN+ Q RAI
Sbjct: 157 YPISLNDAQKRAI 169

>pdb|1C3G|A Chain A, S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 170

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNIS 354
           ++ + +  G  +G  I     G+   +  +   L   ++    P F RDG D+     +S
Sbjct: 37  QIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLS 96
Query: 355 FTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN 413
           F +++LG    + T+ G+ + +   + VQP Q     G+G+         G+  V+++V+
Sbjct: 97  FKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVD 156
Query: 414 FPTALNERQ-RAI 425
           +P +LN+ Q RAI
Sbjct: 157 YPISLNDAQKRAI 169

>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 60  GTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP 119
           G++GM L +          + K+D Y +LG   +A+  ++K+ +  L   YHPD    + 
Sbjct: 4   GSSGMALEQ----------TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADV 53
Query: 120 SA------KRKFQEIRDAYETLRDSEKRAQYDRRRS 149
            A       +KF EI  A++ L + E + +YD +RS
Sbjct: 54  PAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSA------KRKFQEIRDAYET 134
           K+D Y +LG   +A+  ++K+ +  L   YHPD    +  A       +KF EI  A++ 
Sbjct: 9   KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKI 68
Query: 135 LRDSEKRAQYDRRR 148
           L + E + +YD +R
Sbjct: 69  LGNEETKREYDLQR 82

>pdb|2Q2G|A Chain A, Crystal Structure Of Dimerization Domain Of Hsp40 From Cryptosporidium Parvum, Cgd2_1800 Length = 180

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 1/132 (0%)
Query: 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISF 355
           V+V I  G   G  +     G+    G   G+L + ++    P F+RD   +     I  
Sbjct: 44  VEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIXKVTIPL 103
Query: 356 TQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNF 414
            +A+ G    V TL  + +Q+ I + V P    ++  +G          GD  + F + F
Sbjct: 104 VRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGXPIKNQPGQKGDLILEFDICF 163
Query: 415 PTALNERQRAIL 426
           P +L   Q+ ++
Sbjct: 164 PKSLTPEQKKLI 175

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	454
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	7e-99
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	1e-69
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	2e-44
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	6e-44
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	8e-38
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	9e-37
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	6e-33
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	1e-32
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	3e-32
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	4e-32
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	3e-31
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	8e-31
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	3e-30
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	3e-30
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	9e-30
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	1e-29
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	2e-29
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	5e-29
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	5e-29
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	2e-28
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	3e-28
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	8e-28
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	2e-27
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	6e-27
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	2e-26
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	1e-24
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	7e-24
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	2e-23
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	2e-23
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	7e-22
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	1e-20
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	1e-18
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	1e-17
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	2e-17
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	1e-16
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	6e-16
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	3e-13
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	3e-13
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	4e-13
2guz_A	71	Mitochondrial import inner membrane translocase su	3e-10
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	4e-09
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	5e-08

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  298 bits (765), Expect = 7e-99
 Identities = 88/365 (24%), Positives = 149/365 (40%), Gaps = 84/365 (23%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             +D Y +LGV        IK A+  LA++YHPD +K    A+ KF+++ +A+E L+D +
Sbjct: 26  ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQ 84

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           +RA+YD+                       +  GF    QTH      + F +IF     
Sbjct: 85  RRAEYDQ------------------LWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFG 126

Query: 197 --------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKI 248
                   + +    D+++E+ +   E     T+ +S++  +P  +  G       KT  
Sbjct: 127 QQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYN--LPVYNVFGMIESETPKT-- 182

Query: 249 CSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308
                                                          + V IPAGV  G 
Sbjct: 183 -----------------------------------------------LNVKIPAGVVDGQ 195

Query: 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPT 368
            IR+   G  G  G  +G+L++ + +A  P+F   G ++ +   ++  +A LG KV VPT
Sbjct: 196 RIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPT 255

Query: 369 LSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEE 428
           L   + + +P G Q GQ L ++GKGL         GD +   ++  PT  +E+ R + ++
Sbjct: 256 LKESILLTVPPGSQAGQRLRIKGKGLVSKT---HTGDLFAVIKIVMPTKPDEKARELWQQ 312

Query: 429 FAEEE 433
            A  E
Sbjct: 313 LAAAE 317

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score =  220 bits (563), Expect = 1e-69
 Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 20/240 (8%)

Query: 203 PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVT--- 259
            DI+ E+  S  E  KG T  ++ +  + C  C GRG    A  K C++C G G      
Sbjct: 12  KDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKK-CTSCNGQGIKFVTR 70

Query: 260 -IPP----FTSTCSTCKGLGRII--KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRV 312
            + P    F + C  C G G II  KD C +C G  V +  K ++V +  G+  G  I  
Sbjct: 71  QMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVF 130

Query: 313 PEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK 372
               +        G++   +       F RDG D+  ++ I    AI GG+  +  +SG 
Sbjct: 131 KGEADQA-PDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGD 189

Query: 373 -VQVKIPKG--VQPGQLLVLRGKGL--AKNGLFLDHGDQYVRFRVNFPTALNERQRAILE 427
            ++V I  G  + PG   V+ GKG+   K G    +G+  ++F +  P      +  + +
Sbjct: 190 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG---GYGNLIIKFTIKDPENHFTSEENLKK 246

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Length = 170

 Score =  152 bits (386), Expect = 2e-44
 Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 8/161 (4%)

Query: 270 CKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLF 329
             G  +  K   +  KG        ++ + +  G  +G  I     G+   +  +   L 
Sbjct: 15  FVGKKKSFK---IGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQ 71

Query: 330 IKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLV 388
             ++    P F RDG D+     +SF +++LG    + T+ G  + +   + VQP Q   
Sbjct: 72  FVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTST 131

Query: 389 LRGKGL--AKNGLFLDHGDQYVRFRVNFPTALNERQRAILE 427
             G+G+   KN      G+  V+++V++P +LN+ Q+  ++
Sbjct: 132 YPGQGMPTPKNP--SQRGNLIVKYKVDYPISLNDAQKRAID 170

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Length = 180

 Score =  151 bits (383), Expect = 6e-44
 Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 1/161 (0%)

Query: 270 CKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLF 329
             G  + IK          V +    V+V I  G   G  +     G+    G   G+L 
Sbjct: 18  YLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLV 77

Query: 330 IKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLV 388
           + ++    P F+RD   + +   I   +A+ G    V TL    +Q+ I + V P    +
Sbjct: 78  LIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKI 137

Query: 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEF 429
           +  +G+         GD  + F + FP +L   Q+ +++E 
Sbjct: 138 VPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEA 178

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Length = 109

 Score =  132 bits (335), Expect = 8e-38
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 3/96 (3%)

Query: 338 PIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKN 397
           P+F   G ++ +   ++  +A LG KV VPTL   + + +P G Q GQ L ++GKGL   
Sbjct: 5   PLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSK 64

Query: 398 GLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433
                 GD +   ++  PT  +E+ R + ++ A  E
Sbjct: 65  T---HTGDLFAVIKIVMPTKPDEKARELWQQLAAAE 97

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score =  132 bits (334), Expect = 9e-37
 Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 4/162 (2%)

Query: 270 CKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGN 327
             G  + +K     +   G  + +  K + + +  G   G  I  P+ G+         +
Sbjct: 17  YSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQT-SNNIPAD 75

Query: 328 LFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQL 386
           +   LK     IF RDG+DV   + IS  +A+ G  V+VPTL G  + V     ++PG  
Sbjct: 76  IVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMR 135

Query: 387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEE 428
             + G+GL         GD  + F V FP  + +  R +LE+
Sbjct: 136 RKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQ 177

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score =  119 bits (300), Expect = 6e-33
 Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 14/115 (12%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D YE+LGV + A + EI+KA+  LA +YHPD N+ +  A+ KF+EI++AYE L DS+
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIF 194
           KRA YD+      E          GF    D           FSD F  +F +IF
Sbjct: 61  KRAAYDQYGHAAFEQ---GGMGGGGFGGGAD-----------FSDIFGDVFGDIF 101

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score =  117 bits (295), Expect = 1e-32
 Identities = 40/67 (59%), Positives = 50/67 (74%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S  D Y++LGVP NASQ EIKKA++ LAK+YHPD NK++P AK KF ++ +AYE L D  
Sbjct: 5   SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEV 64

Query: 140 KRAQYDR 146
           KR QYD 
Sbjct: 65  KRKQYDA 71

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score =  117 bits (296), Expect = 3e-32
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
               D Y LLG  E +S ++I   F + A + HPD +  NP A   FQ+++ A E L + 
Sbjct: 17  EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNE 76

Query: 139 EKRAQYDR-RRSRGSENEKYSAGDAEGFRYAGDAEG 173
           E RA+YD  RRS+ S   +      +  + +G + G
Sbjct: 77  ESRARYDHWRRSQMSMPFQQWEALNDSVKTSGPSSG 112

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score =  117 bits (294), Expect = 4e-32
 Identities = 31/92 (33%), Positives = 45/92 (48%)

Query: 73  ATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAY 132
           + G C  S+   Y+LLGVP  A+Q +IK A++     YHPD N  +  A  +F  I  AY
Sbjct: 8   SQGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAY 67

Query: 133 ETLRDSEKRAQYDRRRSRGSENEKYSAGDAEG 164
             L  +  R +YDR      +     +G + G
Sbjct: 68  VVLGSATLRRKYDRGLLSDEDLRGPGSGPSSG 99

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score =  118 bits (297), Expect = 3e-31
 Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 19/156 (12%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
           ++ Y LLGV + AS  EI++AF  LA + HPD N NNP+A   F +I  AYE L+D + R
Sbjct: 2   QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR 61

Query: 142 AQYDR--------RRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI 193
            +YD+         +    E+  Y   D   +    +             +S    F   
Sbjct: 62  KKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVNF 121

Query: 194 FEDETSH---FAPDIQVELVLSFAEAAKGCTKHVSF 226
           +    SH    AP        ++ E AK     +  
Sbjct: 122 YSPGCSHCHDLAP--------TWREFAKEVDGLLRI 149

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score =  115 bits (289), Expect = 8e-31
 Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 38/164 (23%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS------AKRKFQEIRDAY 132
             K+D Y +LG   +A+  ++K+ +  L   YHPD    +          +KF EI  A+
Sbjct: 7   MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAW 66

Query: 133 ETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFR-YAGDAEGFRYAYQTHFSDSFHKIFS 191
           + L + E + +YD +R                    + +     +         +     
Sbjct: 67  KILGNEETKREYDLQRCEDDLRNVGPVDAQVYLEEMSWNEGDHSFYLSCRCGGKY----- 121

Query: 192 EIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC 235
            + +DE                              + + CD+C
Sbjct: 122 SVSKDE--------------------------AEEVSLISCDTC 139

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score =  111 bits (280), Expect = 3e-30
 Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
           +   DPY +LGV   ASQ +IKKA+  LA+++HPD NK +P A+ +F +I  AYE L + 
Sbjct: 14  ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNE 72

Query: 139 EKRAQYDR 146
           EKR  YD 
Sbjct: 73  EKRTNYDH 80

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score =  112 bits (281), Expect = 3e-30
 Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S    Y +LG+ +NA+ D+IKK++  LA +YHPD N +NP A  KF+EI +A+  L D+ 
Sbjct: 15  SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDAT 74

Query: 140 KRAQYDRRRSRG-SENEKYSAGDAEGFRYAGDAEG 173
           KR  YD+  S G    E++   +   +  +G + G
Sbjct: 75  KRNIYDKYGSLGLYVAEQFGEENVNTYFVSGPSSG 109

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score =  110 bits (276), Expect = 9e-30
 Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 1/85 (1%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S    Y++LGVP++AS+ +IKKAFH LA +YHPD NK +P A+ KF+EI +AYETL D+ 
Sbjct: 5   SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDAN 63

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEG 164
           +R +YD        + K  +G + G
Sbjct: 64  RRKEYDTLGHSAFTSGKGQSGPSSG 88

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score =  109 bits (274), Expect = 1e-29
 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S  D YE+LGV   AS +++KKA+  LA ++HPD N   P A   F+ I  AY  L + E
Sbjct: 5   SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPE 63

Query: 140 KRAQYDR 146
           KR QYD+
Sbjct: 64  KRKQYDQ 70

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score =  121 bits (303), Expect = 2e-29
 Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 17/175 (9%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             ++ Y LLGV + AS  EI++AF  LA + HPD N NNP+A   F +I  AYE L+D +
Sbjct: 19  HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDED 78

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
            R +YD+    G +  + + G           +   Y           + F         
Sbjct: 79  LRKKYDK---YGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGEL 135

Query: 200 H----FAP--DIQVELVLSFAEAAKGCTKHVSFDAFVPCDS----CHG---RGFP 241
                ++P      +L  ++ E AK     +     V C      C       +P
Sbjct: 136 WFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRI-GAVNCGDDRMLCRMKGVNSYP 189

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score =  108 bits (272), Expect = 5e-29
 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEK 140
              YE+L VP +AS D+IKKA+   A Q+HPD N +N   A++KF+E+ +AYE L D  K
Sbjct: 2   ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTH 181
           R  YDR    G E    +              G  + +  H
Sbjct: 62  REIYDR---YGREGLTGTGTGPSRAEAGSGGPGLEHHHHHH 99

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score =  108 bits (271), Expect = 5e-29
 Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRD 137
           S   D YE+L VP  AS + IKKA+  LA ++HPD N  N   A+R+F+++ +AYE L D
Sbjct: 6   SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSD 65

Query: 138 SEKRAQYDR 146
           ++KR  YDR
Sbjct: 66  AKKRDIYDR 74

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score =  106 bits (267), Expect = 2e-28
 Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 1/87 (1%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRD 137
           S   + YE+LGV  +AS ++IKKA+  LA ++HPD N +N   A++KF+ + +AYE L D
Sbjct: 6   SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSD 65

Query: 138 SEKRAQYDRRRSRGSENEKYSAGDAEG 164
           S+KR+ YDR           ++G + G
Sbjct: 66  SKKRSLYDRAGCDSWRAGGGASGPSSG 92

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score =  106 bits (267), Expect = 3e-28
 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 78  YSSKRDPYELLGVPENA-SQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYE 133
           Y    + Y++L V      + ++ KA+  LA+++HPD  KN      A+ +F+ I  AYE
Sbjct: 11  YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYE 70

Query: 134 TLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRY 167
           TL+D E +  YD         ++      + +R 
Sbjct: 71  TLKDDEAKTNYDY---YLDHPDQRFYNYYQYYRL 101

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score =  105 bits (263), Expect = 8e-28
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS------AKRKFQEIRDAY 132
           + K+D Y +LG   +A+  ++K+ +  L   YHPD    +          +KF EI  A+
Sbjct: 13  TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAW 72

Query: 133 ETLRDSEKRAQYDRRRSRGSE 153
           + L + E + +YD +RS  S 
Sbjct: 73  KILGNEETKKKYDLQRSGPSS 93

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score =  103 bits (260), Expect = 2e-27
 Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
            +D Y+ LG+   AS +EIK+A+   A +YHPD NK  P A+ KF+EI +AY+ L D  K
Sbjct: 2   GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRK 60

Query: 141 RAQYDR 146
           R  +DR
Sbjct: 61  REIFDR 66

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score =  101 bits (255), Expect = 6e-27
 Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 3/67 (4%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
            +   Y++LGV  +AS +E+KKA+  +A ++HPD    NP    +F++I  AYE L D +
Sbjct: 6   KETGYYDVLGVKPDASDNELKKAYRKMALKFHPD---KNPDGAEQFKQISQAYEVLSDEK 62

Query: 140 KRAQYDR 146
           KR  YD+
Sbjct: 63  KRQIYDQ 69

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score =  101 bits (253), Expect = 2e-26
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
            +   Y+LLGV  +A++ E+KK +   A +YHPD          KF+EI +A+E L D +
Sbjct: 6   KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDK---PTGDTEKFKEISEAFEILNDPQ 62

Query: 140 KRAQYDR 146
           KR  YD+
Sbjct: 63  KREIYDQ 69

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 104

 Score = 96.5 bits (241), Expect = 1e-24
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 204 DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP-- 261
                + L+F +AAKG  K  + +    C+ C+G+G     K + C  C G G  TI   
Sbjct: 3   SGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTG 62

Query: 262 PFT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT 299
           PF   STC  C G G II   C+ C+G+G     K    +
Sbjct: 63  PFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQKKRSGPS 102

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score = 96.9 bits (241), Expect = 7e-24
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 79  SSKRDPYELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136
                  +LLG+  +A  +   ++KA+    K++HPD   +    + K +++   Y+ + 
Sbjct: 8   EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKME 63

Query: 137 DSEKRAQYDRRRSRGSENEKYSAGDAEGF 165
           D  K A            E +++    G 
Sbjct: 64  DGVKYAHQPDFGGFWDATEVFASSLNPGV 92

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score = 92.9 bits (231), Expect = 2e-23
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRD 137
           S  ++   ++       + E KK    L  ++HPD N  N   A   F+ +++    L  
Sbjct: 13  SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL-- 70

Query: 138 SEKRAQYDRRRSRGSE 153
            EK+A  D+   R S 
Sbjct: 71  -EKQAFLDQNADRASR 85

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 92.9 bits (231), Expect = 2e-23
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           + +D +++LGV   AS+DE+ KA+  LA   HPD     P ++  F+ + +A   L  + 
Sbjct: 25  NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNI 83

Query: 140 KRAQYD 145
           K     
Sbjct: 84  KSGPSS 89

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 89.5 bits (222), Expect = 7e-22
 Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 79  SSKRDPYELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136
                  +LLG+  +A  +   ++KA+    K++HPD   +    + K +++   Y+ + 
Sbjct: 5   EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKME 60

Query: 137 DSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDA 171
           D  K A            E  + G  E  ++    
Sbjct: 61  DGVKYAHQPDFGGFWDATEIPTYGTDEWEQWWNAF 95

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Length = 121

 Score = 86.2 bits (214), Expect = 1e-20
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 10/96 (10%)

Query: 340 FSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKG--L 394
           F RDG D+  ++ I    AI GG+  +  +SG  ++V I  G  + PG   V+ GKG  +
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 395 AKNGLFLDHGDQYVRFRVNFPT--ALNERQRAILEE 428
            K G    +G+  ++F + FP     +E     LEE
Sbjct: 62  PKYG---GYGNLIIKFTIKFPENHFTSEENLKKLEE 94

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Length = 79

 Score = 76.2 bits (188), Expect = 1e-17
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLG 274
           G TK +       CD CHG G     + + C TC G G+V +         TC  C+G G
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRG 60

Query: 275 RIIKDHCMTCKGSGVV 290
            +IKD C  C G G V
Sbjct: 61  TLIKDPCNKCHGHGRV 76

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 78.9 bits (194), Expect = 2e-17
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 7/72 (9%)

Query: 83  DPYELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETL 135
           D + L G+P     D   +   F  L +QYHPD   +        A ++   I  A++TL
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 136 RDSEKRAQYDRR 147
           R    RA+Y   
Sbjct: 62  RHPLMRAEYLLS 73

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 80.9 bits (200), Expect = 1e-16
 Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 3/71 (4%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETL 135
           S KRD Y++LGV  NA + EI KA+  LA Q+HPD  +N      A++KF +I  A E L
Sbjct: 379 SQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVL 438

Query: 136 RDSEKRAQYDR 146
            D E R ++D 
Sbjct: 439 SDPEMRKKFDD 449

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 74.6 bits (183), Expect = 6e-16
 Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 10/82 (12%)

Query: 79  SSKRDPYELLGVPE-------NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDA 131
                 YEL               Q  ++K +  L  Q+HPD  +       +   +  A
Sbjct: 8   RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQA 64

Query: 132 YETLRDSEKRAQYDRRRSRGSE 153
           Y TL+D  +R+QY  +  R  +
Sbjct: 65  YHTLKDPLRRSQYMLKLLRNID 86

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 66.8 bits (162), Expect = 3e-13
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKR 141
           ++ +G+ +  + +++KK +       HPD     P    AK  F E+ DA+    +  ++
Sbjct: 120 WKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQK 179

Query: 142 AQY 144
             Y
Sbjct: 180 PLY 182

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 63.8 bits (155), Expect = 3e-13
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 79  SSKRDPYELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136
           + K    ELL +P     D   +++A+   +   HPD   ++       QE+   + T +
Sbjct: 8   ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSH----ALMQELNSLWGTFK 63

Query: 137 DSEKRAQYDRRRS 149
                 + +   +
Sbjct: 64  TEVYNLRMNLGGT 76

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 67.1 bits (163), Expect = 4e-13
 Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 7/94 (7%)

Query: 79  SSKRDPYELLGVPE--NASQDEIKKAFHMLAKQYHPDANKNNPSAKR-----KFQEIRDA 131
              RD + L+           +++  +  L +  HPD        ++         + DA
Sbjct: 40  DPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDA 99

Query: 132 YETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGF 165
           Y+TL     R  Y  +       E+        F
Sbjct: 100 YKTLLAPLSRGLYLLKLHGIEIPERTDYEMDRQF 133

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 55.1 bits (133), Expect = 3e-10
 Identities = 10/63 (15%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 80  SKRDPYELLGVPENA-SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
           + ++  ++L + EN  ++ ++K+    +    HPD   +         +I +A + L   
Sbjct: 12  NSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP----FLATKINEAKDFLEKR 67

Query: 139 EKR 141
              
Sbjct: 68  GIS 70

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 52.7 bits (126), Expect = 4e-09
 Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRD 137
           ++ +G+ +  + +++KK +       HP      P    AK  F E+ DA+    +
Sbjct: 36  WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 50.0 bits (119), Expect = 5e-08
 Identities = 7/61 (11%), Positives = 27/61 (44%), Gaps = 7/61 (11%)

Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-------AKRKFQEIRDAYETLRD 137
           ++ + + +    + ++K++       HPD  +   +       A++ F+ +++A++    
Sbjct: 43  WKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNT 102

Query: 138 S 138
            
Sbjct: 103 L 103

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	454
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	100.0
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	100.0
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	100.0
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	100.0
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	100.0
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.94
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.91
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.85
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.85
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.83
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.83
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.83
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.83
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.83
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.82
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.82
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.82
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.81
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.81
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.8
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.8
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.8
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	99.77
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.75
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.74
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.73
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.72
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.71
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.71
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.69
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.69
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.68
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.67
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.66
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.65
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.64
2guz_A	71	Mitochondrial import inner membrane translocase su	99.61
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.59
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.59
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.55
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	99.32
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	99.3
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	98.91
2guz_B	65	Mitochondrial import inner membrane translocase su	98.78
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	98.7
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	98.67
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	98.56
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.51
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	98.5
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	98.47
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	97.48
3pmq_A	669	Decaheme cytochrome C MTRF; greek KEY, C type cyto	97.43
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	97.4
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	97.39
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	96.75
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	96.71
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	96.54
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	88.0

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=100.00  E-value=8.7e-65  Score=506.52  Aligned_cols=284  Identities=29%  Similarity=0.548  Sum_probs=159.9

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCcccc
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS  158 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~  158 (454)
                      +...|||+||||+++||.+|||+|||+||++||||++++ ++|+++|++|++||++|+||.+|+.||+++..+... .++
T Consensus        25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~-~~~  102 (329)
T 3lz8_A           25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDP-GFG  102 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCC-Ccc
Confidence            445799999999999999999999999999999999984 578999999999999999999999999984321100 000


Q ss_pred             CCCCCCccccCCCCcccccccccccCcccchhcccccc-------ccccCCCCcEEEEEEEeeccccCcceeeeeceeec
Q 012891          159 AGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP  231 (454)
Q Consensus       159 ~~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~-------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~  231 (454)
                          .++.+  .+++|.       +.+|.++|+.+|++       ....+++|+.++|.|+|+|+|+|+++++.+++.+.
T Consensus       103 ----~~~~~--~~~~f~-------~~~f~diF~~~Fg~~g~~~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~  169 (329)
T 3lz8_A          103 ----RQRQT--HEQSYS-------QQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVY  169 (329)
T ss_dssp             -----------------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEEC
T ss_pred             ----ccccc--ccCCcC-------CCchhhhhHhhhcCcCCCCCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEee
Confidence                00100  001110       01344556666653       12457899999999999999999999999987653


Q ss_pred             ccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCEEE
Q 012891          232 CDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR  311 (454)
Q Consensus       232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~  311 (454)
                      |    +.                 |.+                              .+...++++|.||||+++|++|+
T Consensus       170 ~----g~-----------------G~v------------------------------~~~~~~~l~V~IP~Gv~~G~~Ir  198 (329)
T 3lz8_A          170 N----VF-----------------GMI------------------------------ESETPKTLNVKIPAGVVDGQRIR  198 (329)
T ss_dssp             C----SC-----------------C-C------------------------------CEEEEEEEEEEECTTCCTTCEEE
T ss_pred             c----CC-----------------eEE------------------------------EEecceEEEEeCCCCCCCCCEEE
Confidence            2    11                 111                              12335689999999999999999


Q ss_pred             ECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEEEcC
Q 012891          312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRG  391 (454)
Q Consensus       312 ~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~l~g  391 (454)
                      |+|+|+++..++.+|||||+|+|+||+.|+|+|+||+++++|+++||++|++++|+||||++.|+||+++++|++++|+|
T Consensus       199 l~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ip~gt~~g~~~rl~G  278 (329)
T 3lz8_A          199 LKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKG  278 (329)
T ss_dssp             ESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETT
T ss_pred             EcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEEECCCCCCCCEEEEcC
Confidence            99999998778889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHH
Q 012891          392 KGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAE  431 (454)
Q Consensus       392 ~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~  431 (454)
                      +|||..+   .+|||||+|+|+||++||++|+++|++|++
T Consensus       279 ~GmP~~~---~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~  315 (329)
T 3lz8_A          279 KGLVSKT---HTGDLFAVIKIVMPTKPDEKARELWQQLAA  315 (329)
T ss_dssp             CSCBCSS---CBCCEEEEEEECCCSSCCHHHHHHHHHHHH
T ss_pred             CCCCCCC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            9999762   479999999999999999999999999988

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=100.00  E-value=8.7e-57  Score=433.14  Aligned_cols=226  Identities=29%  Similarity=0.540  Sum_probs=200.8

Q ss_pred             ccCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCC
Q 012891          199 SHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTC  270 (454)
Q Consensus       199 ~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C  270 (454)
                      +.+++|++++|.|||+|||+|+++++.+.+.+.|+.|+|+|...+. ..+|+.|+|+|.+...        .++.+|+.|
T Consensus         8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C   86 (248)
T 1nlt_A            8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVC   86 (248)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTC
T ss_pred             CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCC
Confidence            3578999999999999999999999999999999999999999887 4899999999986421        247799999


Q ss_pred             CCceEEe--eeecccccCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeE
Q 012891          271 KGLGRII--KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY  348 (454)
Q Consensus       271 ~G~G~~~--~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~  348 (454)
                      +|+|+++  +++|..|+|.|++.+.++++|.||||+++|++|+|+|+|++++ ++.+|||||+|+++||+.|+|+|+|||
T Consensus        87 ~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~-~g~~GDl~v~i~v~~h~~F~R~G~DL~  165 (248)
T 1nlt_A           87 HGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHKSFKRDGDDLV  165 (248)
T ss_dssp             SSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred             CCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCC-CCCcceEEEEEEEecCccceeeCCEEE
Confidence            9999999  8999999999999999999999999999999999999999974 668999999999999999999999999


Q ss_pred             EEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCC--CCHHHH
Q 012891          349 VDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTA--LNERQR  423 (454)
Q Consensus       349 ~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~--~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~--ls~~q~  423 (454)
                      ++++|+|.|||+|++++|+||||+ +.|+||++  ++||++++|+|+|||..+.. .+|||||+|+|+||++  ||++|+
T Consensus       166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~  244 (248)
T 1nlt_A          166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENL  244 (248)
T ss_dssp             EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC---------
T ss_pred             EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHH
Confidence            999999999999999999999996 89999998  99999999999999986443 5799999999999999  999999


Q ss_pred             HHHH
Q 012891          424 AILE  427 (454)
Q Consensus       424 ~~l~  427 (454)
                      ++|+
T Consensus       245 ~~l~  248 (248)
T 1nlt_A          245 KKLE  248 (248)
T ss_dssp             ----
T ss_pred             HhhC
Confidence            9985

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=100.00  E-value=2.6e-45  Score=336.96  Aligned_cols=177  Identities=28%  Similarity=0.490  Sum_probs=157.9

Q ss_pred             CCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeec
Q 012891          202 APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC  281 (454)
Q Consensus       202 g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C  281 (454)
                      ++|++++|.|||+|||+|+++++.+.+                                                   +|
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~---------------------------------------------------~c   30 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISH---------------------------------------------------KR   30 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEE---------------------------------------------------EE
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEec---------------------------------------------------cc
Confidence            468999999999999999999987642                                                   24


Q ss_pred             ccccCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCC
Q 012891          282 MTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILG  361 (454)
Q Consensus       282 ~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG  361 (454)
                      ..|+|.|++.+.++++|.||||+++|++|+|+|+|++++ ++.+|||||+|++++|+.|+|+|+||+++++|++.||++|
T Consensus        31 ~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~-~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG  109 (181)
T 3agx_A           31 LNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCG  109 (181)
T ss_dssp             ECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCS-SSCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHC
T ss_pred             CCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCC-CCCcccEEEEEEEeccccceeeCCcEEEEEEcCHHHHhCC
Confidence            445555556778999999999999999999999999976 6789999999999999999999999999999999999999


Q ss_pred             CEEEEeCCCCE-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Q 012891          362 GKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFA  430 (454)
Q Consensus       362 ~~~~i~tldG~-~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~  430 (454)
                      ++++|+||||+ +.|++|+++++|++++|+|+|||..+....+|||||+|+|+||++||++|+++|++++
T Consensus       110 ~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~~  179 (181)
T 3agx_A          110 CTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL  179 (181)
T ss_dssp             EEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHHS
T ss_pred             CEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence            99999999995 8999999999999999999999986443457999999999999999999999999987

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.3e-44  Score=329.49  Aligned_cols=177  Identities=21%  Similarity=0.356  Sum_probs=162.4

Q ss_pred             CCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeee
Q 012891          201 FAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH  280 (454)
Q Consensus       201 ~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~  280 (454)
                      +++|++++|.|||+|||+|+++++.+.+.+.|+.                                              
T Consensus         2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~----------------------------------------------   35 (180)
T 2q2g_A            2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH----------------------------------------------   35 (180)
T ss_dssp             --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred             CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence            4789999999999999999999999998887731                                              


Q ss_pred             cccccCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhC
Q 012891          281 CMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAIL  360 (454)
Q Consensus       281 C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAll  360 (454)
                             |++.+.++++|.||||+++|++|+|+|+|+++.+++.+|||||+|++++|+.|+|+|+||+++++|+|.||++
T Consensus        36 -------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAll  108 (180)
T 2q2g_A           36 -------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALT  108 (180)
T ss_dssp             -------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHH
T ss_pred             -------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHHHHhC
Confidence                   3345678999999999999999999999999666889999999999999999999999999999999999999


Q ss_pred             CCEEEEeCCCCE-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Q 012891          361 GGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFA  430 (454)
Q Consensus       361 G~~~~i~tldG~-~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~  430 (454)
                      |++++|+||||+ +.|++|+++++|++++|+|+|||..+.+..+|||||+|+|+||++||++|+++|++++
T Consensus       109 G~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~~~  179 (180)
T 2q2g_A          109 GFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL  179 (180)
T ss_dssp             CEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHHHHC
T ss_pred             CCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence            999999999995 8999999999999999999999976444457999999999999999999999999986

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=100.00  E-value=6.2e-42  Score=311.59  Aligned_cols=169  Identities=22%  Similarity=0.395  Sum_probs=153.7

Q ss_pred             CCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecc
Q 012891          203 PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCM  282 (454)
Q Consensus       203 ~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~  282 (454)
                      +|++++|.|||+|||+|+++++.+.+..    +                                               
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~-----------------------------------------------   29 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P-----------------------------------------------   29 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEE----T-----------------------------------------------
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEec----C-----------------------------------------------
Confidence            4789999999999999999999987651    0                                               


Q ss_pred             cccCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCC
Q 012891          283 TCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGG  362 (454)
Q Consensus       283 ~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~  362 (454)
                          .|.+ +.++++|.||||+++|++|+|+|+|+++.+++.+|||||+|++++|+.|+|+|+||+++++|++.||++|+
T Consensus        30 ----~G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~  104 (170)
T 1c3g_A           30 ----HGAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGF  104 (170)
T ss_dssp             ----TTEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHHHHHHCE
T ss_pred             ----CCcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHHHHhCCC
Confidence                1223 56889999999999999999999999777788999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCCE-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHH
Q 012891          363 KVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILE  427 (454)
Q Consensus       363 ~~~i~tldG~-~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~  427 (454)
                      +++|+||||+ +.|++|+++++|++++|+|+|||..+....+|||||+|+|+||++||++|+++|+
T Consensus       105 ~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~  170 (170)
T 1c3g_A          105 SKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID  170 (170)
T ss_dssp             EEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred             eEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence            9999999996 8999999999999999999999976444457999999999999999999999874

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.94  E-value=3.1e-27  Score=198.68  Aligned_cols=96  Identities=31%  Similarity=0.561  Sum_probs=90.3

Q ss_pred             ecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEC
Q 012891          335 ADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNF  414 (454)
Q Consensus       335 ~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~  414 (454)
                      +||+.|+|+|+||+++++|+|.||++|++++|+|+||.++|+||+++++|++++|+|+|||..+   .+|||||+|+|+|
T Consensus         2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~~~v~ip~g~~~G~~~rl~G~G~p~~~---~~GDL~v~~~V~~   78 (109)
T 3i38_A            2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKT---HTGDLFAVIKIVM   78 (109)
T ss_dssp             --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBCSS---CBCCEEEEEEECC
T ss_pred             CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCCEEEeeCCCcCcCeEEEECCccCCCCC---CCcCEEEEEEEEC
Confidence            6899999999999999999999999999999999999999999999999999999999999843   5899999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHh
Q 012891          415 PTALNERQRAILEEFAEEE  433 (454)
Q Consensus       415 P~~ls~~q~~~l~~~~~~~  433 (454)
                      |++||++|+++|+++++..
T Consensus        79 P~~Ls~~q~~~l~~l~~~~   97 (109)
T 3i38_A           79 PTKPDEKARELWQQLAAAE   97 (109)
T ss_dssp             CSSCCHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHhhc
Confidence            9999999999999999874

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.91  E-value=1.5e-24  Score=185.90  Aligned_cols=94  Identities=31%  Similarity=0.547  Sum_probs=84.7

Q ss_pred             cccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC
Q 012891          339 IFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP  415 (454)
Q Consensus       339 ~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~--~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P  415 (454)
                      .|+|+|+||+++++|+|.+|++|++++|+||||+ +.|+||+|  +++|++++|+|+|||..+.. .+|||||+|+|+||
T Consensus         1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P   79 (121)
T 1xao_A            1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP   79 (121)
T ss_dssp             CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred             CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence            4899999999999999999999999999999997 89999999  99999999999999986443 57999999999999


Q ss_pred             CC--CCHHHHHHHHHHHHHh
Q 012891          416 TA--LNERQRAILEEFAEEE  433 (454)
Q Consensus       416 ~~--ls~~q~~~l~~~~~~~  433 (454)
                      +.  ||++|+++|++++...
T Consensus        80 ~~~~ls~~q~~~l~~l~~~~   99 (121)
T 1xao_A           80 ENHFTSEENLKKLEEILPPR   99 (121)
T ss_dssp             CTTCSCHHHHHHHHHHSCCC
T ss_pred             CCCCCCHHHHHHHHHHcccc
Confidence            99  9999999999999754

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.85  E-value=2.6e-22  Score=167.33  Aligned_cols=73  Identities=49%  Similarity=0.802  Sum_probs=68.2

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE  153 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~  153 (454)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.+++++++|++|++||++|+||.+|+.||.++..+..
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~   74 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE   74 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence            4699999999999999999999999999999999987788999999999999999999999999999876544

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=8.2e-22  Score=156.26  Aligned_cols=73  Identities=56%  Similarity=0.853  Sum_probs=68.3

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g  151 (454)
                      ....|||+||||+++|+.+|||+|||+|+++||||++++++++.++|++|++||++|+||.+|..||.++..+
T Consensus         4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   76 (79)
T 2dn9_A            4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP   76 (79)
T ss_dssp             SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence            4467999999999999999999999999999999999887889999999999999999999999999997654

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.83  E-value=3.5e-21  Score=151.83  Aligned_cols=71  Identities=45%  Similarity=0.776  Sum_probs=65.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS  152 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~  152 (454)
                      ..|||+||||+++|+.+|||+|||+|++++|||++++ +.+.+.|+.|++||++|+||.+|..||.++..+.
T Consensus         2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   72 (77)
T 1hdj_A            2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL   72 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence            4699999999999999999999999999999999974 6788999999999999999999999999976543

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.83  E-value=5.4e-21  Score=152.61  Aligned_cols=73  Identities=47%  Similarity=0.734  Sum_probs=66.6

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g  151 (454)
                      +...|||+||||+++|+.+|||+|||+|+++||||+++... .+.++|++|++||++|+||.+|..||.++..+
T Consensus         6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   79 (82)
T 2ej7_A            6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP   79 (82)
T ss_dssp             SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred             CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence            34579999999999999999999999999999999998653 67889999999999999999999999997654

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=4.6e-21  Score=155.12  Aligned_cols=72  Identities=51%  Similarity=0.858  Sum_probs=66.7

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g  151 (454)
                      ....|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|..||.++..+
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   75 (88)
T 2ctr_A            4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA   75 (88)
T ss_dssp             CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred             CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence            34579999999999999999999999999999999998 5788999999999999999999999999987543

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=5.8e-21  Score=150.96  Aligned_cols=72  Identities=44%  Similarity=0.713  Sum_probs=66.6

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g  151 (454)
                      ....|||+||||+++|+.+|||+|||+|++++|||+++ .+.+.++|++|++||++|+||.+|..||.++..+
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~   75 (78)
T 2ctp_A            4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP   75 (78)
T ss_dssp             SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence            34579999999999999999999999999999999997 4788999999999999999999999999997654

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=4e-21  Score=158.90  Aligned_cols=72  Identities=39%  Similarity=0.638  Sum_probs=67.5

Q ss_pred             CCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891           77 CYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (454)
Q Consensus        77 ~~~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~  148 (454)
                      ..++..|||+||||+++|+.+|||+|||+|+++||||++++++++.++|++|++||+||+||.+|..||...
T Consensus        12 ~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l   83 (99)
T 2yua_A           12 CSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL   83 (99)
T ss_dssp             CSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred             CCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence            346678999999999999999999999999999999999888889999999999999999999999999963

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.82  E-value=1.3e-20  Score=153.81  Aligned_cols=74  Identities=45%  Similarity=0.710  Sum_probs=67.1

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCC
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS  152 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~  152 (454)
                      ....|||+||||+++|+.+|||+|||+|+++||||+++.. +.++++|++|++||++|+||.+|+.||.++..+.
T Consensus         6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (92)
T 2dmx_A            6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW   80 (92)
T ss_dssp             CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred             CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence            3457999999999999999999999999999999999865 3688999999999999999999999999976543

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.82  E-value=9.2e-21  Score=160.24  Aligned_cols=73  Identities=37%  Similarity=0.574  Sum_probs=68.6

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g  151 (454)
                      +...|||+||||+++|+.+|||+|||+|+++||||++++++++.++|++|++||+||+||.+|+.||+++..+
T Consensus        17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~   89 (112)
T 2ctq_A           17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ   89 (112)
T ss_dssp             CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred             cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence            4568999999999999999999999999999999999977889999999999999999999999999997654

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.82  E-value=1.5e-20  Score=151.99  Aligned_cols=71  Identities=48%  Similarity=0.792  Sum_probs=65.9

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (454)
Q Consensus        80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g  151 (454)
                      ...|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||++|+||.+|..||.++..+
T Consensus        15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   85 (88)
T 2cug_A           15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP   85 (88)
T ss_dssp             SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence            45799999999999999999999999999999999985 678899999999999999999999999996543

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.81  E-value=1.7e-20  Score=157.82  Aligned_cols=73  Identities=45%  Similarity=0.735  Sum_probs=68.2

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g  151 (454)
                      ....+||+||||+++|+.+|||+|||+|++++|||++++++++.++|++|++||++|+||.+|+.||.++..+
T Consensus        14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~   86 (109)
T 2ctw_A           14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLG   86 (109)
T ss_dssp             SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHH
T ss_pred             CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccc
Confidence            4568999999999999999999999999999999999988889999999999999999999999999986543

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.81  E-value=2.4e-20  Score=145.52  Aligned_cols=68  Identities=38%  Similarity=0.702  Sum_probs=61.9

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~  149 (454)
                      ....|||+||||+++|+.+|||+||++|++++|||++++.   .++|++|++||++|+||.+|+.||++|.
T Consensus         5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   72 (73)
T 2och_A            5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE   72 (73)
T ss_dssp             -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred             cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence            3457999999999999999999999999999999999753   5799999999999999999999999864

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.80  E-value=3.4e-20  Score=153.08  Aligned_cols=72  Identities=47%  Similarity=0.738  Sum_probs=64.6

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE  153 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~  153 (454)
                      .|||+||||+++|+.+|||+|||+|+++||||+++.. +.+.++|++|++||++|+||.+|+.||.++..+..
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~   74 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT   74 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence            5899999999999999999999999999999999865 35889999999999999999999999999766543

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.80  E-value=3.3e-20  Score=151.88  Aligned_cols=71  Identities=32%  Similarity=0.597  Sum_probs=65.0

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN------PSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~  149 (454)
                      +...|||+||||+++|+.+|||+|||+|+++||||+++.+      +.+.++|++|++||+||+||.+|+.||....
T Consensus        13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   89 (94)
T 1wjz_A           13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            4568999999999999999999999999999999998743      4578999999999999999999999999853

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.80  E-value=3.1e-20  Score=151.50  Aligned_cols=70  Identities=37%  Similarity=0.663  Sum_probs=64.0

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g  151 (454)
                      ....|||+||||+++|+.+|||+|||+|+++||||+++.+   .++|++|++||++|+||.+|+.||.++..+
T Consensus         5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~   74 (92)
T 2o37_A            5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEA   74 (92)
T ss_dssp             CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHH
T ss_pred             ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHH
Confidence            3567999999999999999999999999999999999764   469999999999999999999999997544

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.77  E-value=3.1e-20  Score=154.97  Aligned_cols=99  Identities=32%  Similarity=0.658  Sum_probs=89.2

Q ss_pred             CCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeC--C--ccccCCCCCCceEEe
Q 012891          202 APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--P--FTSTCSTCKGLGRII  277 (454)
Q Consensus       202 g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--~--~~~~C~~C~G~G~~~  277 (454)
                      |.|+.++|.|+|+|||+|+++++.+.+.+.|+.|+|+|...+....+|+.|+|+|.+.+.  +  +..+|+.|+|+|+++
T Consensus         1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i   80 (104)
T 2ctt_A            1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII   80 (104)
T ss_dssp             CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC
T ss_pred             CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC
Confidence            467888999999999999999999999999999999999988888999999999987542  2  367899999999999


Q ss_pred             eeecccccCCceeeceEEEEEEe
Q 012891          278 KDHCMTCKGSGVVDGVKEVKVTI  300 (454)
Q Consensus       278 ~~~C~~C~g~G~~~~~~~~~V~I  300 (454)
                      +++|..|+|.|++.+.++|+|++
T Consensus        81 ~~~C~~C~G~G~v~~~k~l~V~~  103 (104)
T 2ctt_A           81 ISPCVVCRGAGQAKQKKRSGPSS  103 (104)
T ss_dssp             SSCCSSSSSCSEECCCCSSCCSC
T ss_pred             CCcCCCCCCeeEEEEEEEEEEEc
Confidence            99999999999999888877754

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.75  E-value=3.8e-19  Score=149.58  Aligned_cols=70  Identities=34%  Similarity=0.576  Sum_probs=64.6

Q ss_pred             CCCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891           80 SKRDPYELLGVPENA-SQDEIKKAFHMLAKQYHPDANKN---NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (454)
Q Consensus        80 ~~~~~Y~iLgv~~~a-~~~eIk~ayr~la~~~HPD~~~~---~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~  149 (454)
                      ...|||+||||+++| +.+|||+|||+|++++|||++++   .+.+.++|++|++||++|+||.+|+.||.++.
T Consensus        13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~   86 (109)
T 2qsa_A           13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD   86 (109)
T ss_dssp             TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            457999999999999 99999999999999999999975   35688999999999999999999999999853

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.74  E-value=1.4e-18  Score=162.39  Aligned_cols=72  Identities=46%  Similarity=0.760  Sum_probs=67.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE  153 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~  153 (454)
                      .|||+||||+++|+.+|||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||++|..+..
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~   73 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE   73 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence            589999999999999999999999999999999988888999999999999999999999999999766543

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.73  E-value=2.9e-18  Score=139.12  Aligned_cols=62  Identities=32%  Similarity=0.552  Sum_probs=57.9

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhh
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQ  143 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~  143 (454)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.
T Consensus        26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence            4799999999999999999999999999999999974 6788999999999999999998864

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.72  E-value=2.9e-18  Score=153.24  Aligned_cols=70  Identities=31%  Similarity=0.588  Sum_probs=64.2

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------hHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP------SAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~------~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~  148 (454)
                      +...|||+||||+++|+.++||+|||+|++++|||+++..+      .|.++|++|++||++|+||.+|+.||..+
T Consensus         7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~   82 (155)
T 2l6l_A            7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR   82 (155)
T ss_dssp             CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred             CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence            45679999999999999999999999999999999998653      36789999999999999999999999874

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.71  E-value=3.1e-18  Score=137.95  Aligned_cols=68  Identities=21%  Similarity=0.238  Sum_probs=60.6

Q ss_pred             CCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHhhhhhhhhhh
Q 012891           76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQ  143 (454)
Q Consensus        76 ~~~~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~r~~  143 (454)
                      +......++|+||||+++|+.+|||+|||+||++||||++++++ .++++|++|++||++|+|...|..
T Consensus        10 ~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~   78 (88)
T 1iur_A           10 PRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ   78 (88)
T ss_dssp             CSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred             CCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence            34456689999999999999999999999999999999998763 588999999999999999987743

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.71  E-value=8.9e-18  Score=156.55  Aligned_cols=100  Identities=19%  Similarity=0.368  Sum_probs=73.5

Q ss_pred             ccccccccccccccccCCCCCchhhhhhhhcccCCCCCCCCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh
Q 012891           42 HKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNP  119 (454)
Q Consensus        42 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~  119 (454)
                      ....||+|......    .....+++..+...+.  .....|||+||||+++  ++.++||+|||+|+++||||++++.+
T Consensus         9 ~~~~Cw~C~~~~~~----~~~~~~fC~~c~~~q~--~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~   82 (207)
T 3bvo_A            9 NYPRCWNCGGPWGP----GREDRFFCPQCRALQA--PDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRS   82 (207)
T ss_dssp             --CBCSSSCCBCCS----SCSCCCBCTTTCCBCC--CCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSC
T ss_pred             CCCCCCCCCCCccc----ccccccccccccccCC--CCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            34568999763100    0122233333333322  2345799999999986  79999999999999999999998654


Q ss_pred             h-----HHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891          120 S-----AKRKFQEIRDAYETLRDSEKRAQYDRR  147 (454)
Q Consensus       120 ~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~  147 (454)
                      +     |.++|++|++||+||+||.+|+.||..
T Consensus        83 ~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~  115 (207)
T 3bvo_A           83 QTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLK  115 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            3     567899999999999999999999975

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.69  E-value=3.1e-18  Score=144.60  Aligned_cols=65  Identities=23%  Similarity=0.390  Sum_probs=60.4

Q ss_pred             CCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891           81 KRDPYELLGVPENASQ--DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~--~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~  149 (454)
                      ..+||+||||+++|+.  +|||+|||+||+++|||++++    .++|++|++||+||+||.+|+.||.++.
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~   73 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence            3689999999999999  999999999999999999875    4799999999999999999999998764

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.69  E-value=1.6e-17  Score=131.30  Aligned_cols=62  Identities=18%  Similarity=0.306  Sum_probs=56.4

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891           82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (454)
Q Consensus        82 ~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~  148 (454)
                      .++|+||||+++  ++.+|||+|||+||+++|||++++    .++|++|++||++|+|+.+|..+ .+|
T Consensus        11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~-~~g   74 (79)
T 1faf_A           11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRM-NLG   74 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTT-CCS
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHH-hcC
Confidence            589999999999  999999999999999999999863    57999999999999999999884 453

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.67  E-value=8.5e-18  Score=151.52  Aligned_cols=65  Identities=23%  Similarity=0.386  Sum_probs=57.8

Q ss_pred             CCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891           81 KRDPYELLGVPENAS--QDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~--~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~  149 (454)
                      ..|||+||||+++|+  .+|||+|||+||+++|||++++    +++|++|++||++|+||.+|+.||++|.
T Consensus        10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E           10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            369999999999998  6999999999999999999875    3789999999999999999999999975

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.66  E-value=3.9e-17  Score=148.06  Aligned_cols=66  Identities=21%  Similarity=0.447  Sum_probs=60.6

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHhhhhhhhhhhh
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQY  144 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~vL~d~~~r~~y  144 (454)
                      +...|||+||||+++|+.+|||+|||+|+++||||++++.+.   |+++|++|++||+||+||.+|+.|
T Consensus       114 ~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          114 WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             CTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            344799999999999999999999999999999999986553   789999999999999999999987

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.65  E-value=4.8e-17  Score=147.36  Aligned_cols=68  Identities=29%  Similarity=0.465  Sum_probs=62.0

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891           82 RDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (454)
Q Consensus        82 ~~~Y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~  149 (454)
                      +|||++|||++++  |..+||+|||+|+++||||++++.+.     |.++|+.|++||+||+||.+|+.||....
T Consensus         1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~   75 (171)
T 1fpo_A            1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH   75 (171)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence            3899999999999  99999999999999999999987653     55799999999999999999999999743

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.64  E-value=6.1e-17  Score=130.90  Aligned_cols=56  Identities=21%  Similarity=0.440  Sum_probs=52.2

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHhhhh
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRD  137 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~---~a~~~f~~i~~Ay~vL~d  137 (454)
                      .++|++|||+++||.+|||+|||+||++||||++++++   .|+++|++|++||+||.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999999998765   378899999999999986

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.61  E-value=2.5e-16  Score=121.85  Aligned_cols=59  Identities=15%  Similarity=0.278  Sum_probs=52.8

Q ss_pred             CCCCCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhh
Q 012891           79 SSKRDPYELLGVPE-NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR  141 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~-~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r  141 (454)
                      +...++|+||||++ +|+.+|||+|||+|++++|||+++ +   .++|++|++||++|+|+..|
T Consensus        11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~---~~~f~~i~~Aye~L~~~~~r   70 (71)
T 2guz_A           11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-S---PFLATKINEAKDFLEKRGIS   70 (71)
T ss_dssp             CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-C---HHHHHHHHHHHHHHHHHCCC
T ss_pred             CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-C---HHHHHHHHHHHHHHhhhhhc
Confidence            44568999999999 799999999999999999999974 3   46999999999999998765

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.59  E-value=2.9e-16  Score=130.82  Aligned_cols=60  Identities=13%  Similarity=0.200  Sum_probs=52.9

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---Ch----hHHHHHHHHHHHHHhhhhhh
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---NP----SAKRKFQEIRDAYETLRDSE  139 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~---~~----~a~~~f~~i~~Ay~vL~d~~  139 (454)
                      +...|||+|||++. ||.+|||+|||+||++||||++++   ++    .|+++|++|++||++|+|+.
T Consensus        38 ~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           38 WSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             CTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             cccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            44579999999996 999999999999999999999863   22    36889999999999999985

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.59  E-value=4.2e-16  Score=142.24  Aligned_cols=66  Identities=29%  Similarity=0.491  Sum_probs=59.8

Q ss_pred             CCCCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891           80 SKRDPYELL------GVPE-NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (454)
Q Consensus        80 ~~~~~Y~iL------gv~~-~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~  148 (454)
                      ...|||+||      |+++ +||.++||+|||+|+++||||++++   +.++|+.|++||+||+||.+|+.||...
T Consensus         9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l   81 (181)
T 3uo3_A            9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL   81 (181)
T ss_dssp             CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred             CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence            357999999      4665 8999999999999999999999975   5689999999999999999999999964

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.55  E-value=4.7e-16  Score=172.23  Aligned_cols=75  Identities=44%  Similarity=0.730  Sum_probs=40.9

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE  153 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~  153 (454)
                      ....|||+||||+++||.+|||+|||+||++||||++++++++.++|++|++||++|+||.+|+.||++|..+..
T Consensus        18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~   92 (780)
T 3apo_A           18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE   92 (780)
T ss_dssp             -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC------
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccc
Confidence            456899999999999999999999999999999999987788999999999999999999999999999876654

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=99.32  E-value=1e-12  Score=103.60  Aligned_cols=74  Identities=38%  Similarity=0.885  Sum_probs=64.7

Q ss_pred             CcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeec
Q 012891          219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG  292 (454)
Q Consensus       219 G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~  292 (454)
                      |++++|.+.+.+.|+.|+|+|........+|+.|+|+|.+...    .+..+|+.|+|.|.+++++|+.|+|.|++.+
T Consensus         1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~~~   78 (79)
T 1exk_A            1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVER   78 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSSBCGGGTTSSEEEC
T ss_pred             CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECCCcCCCCCCeEEEee
Confidence            6788999999999999999999877777899999999987532    1356899999999999999999999998754

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=99.30  E-value=5.7e-12  Score=120.77  Aligned_cols=131  Identities=24%  Similarity=0.384  Sum_probs=88.6

Q ss_pred             EEEEEEeeccccCcceeee-eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceEE
Q 012891          207 VELVLSFAEAAKGCTKHVS-FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI  276 (454)
Q Consensus       207 ~~l~itlee~~~G~~k~v~-~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~  276 (454)
                      ..+.++-...+..|...-. -.....|+.|+|+|....         ....+|+.|+|.|.+..  ....|+.|+|.|.+
T Consensus        31 k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~--~~~~C~~C~G~g~~  108 (248)
T 1nlt_A           31 AKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIID--PKDRCKSCNGKKVE  108 (248)
T ss_dssp             EEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCC--TTSBCSSSTTSCEE
T ss_pred             EEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEec--cCCCCcccCCCceE
Confidence            4455555555543332221 112378999999997421         23568999999998731  26789999999987


Q ss_pred             eeeecccccCC-ceeeceE-------------------------------------------------------------
Q 012891          277 IKDHCMTCKGS-GVVDGVK-------------------------------------------------------------  294 (454)
Q Consensus       277 ~~~~C~~C~g~-G~~~~~~-------------------------------------------------------------  294 (454)
                      .+..-.+.... |+.++++                                                             
T Consensus       109 ~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG  188 (248)
T 1nlt_A          109 NERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSG  188 (248)
T ss_dssp             EEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSS
T ss_pred             eeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCC
Confidence            54333333222 2222221                                                             


Q ss_pred             -EEEEEecCc--cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCc
Q 012891          295 -EVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI  339 (454)
Q Consensus       295 -~~~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~  339 (454)
                       .++|.||||  +++|++++|+|+|++...+...|||||+|+|.-...
T Consensus       189 ~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~  236 (248)
T 1nlt_A          189 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPEN  236 (248)
T ss_dssp             CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-
T ss_pred             CEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCC
Confidence             589999999  999999999999998654436799999999995443

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=98.91  E-value=7.1e-10  Score=112.17  Aligned_cols=65  Identities=46%  Similarity=0.710  Sum_probs=55.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hhHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 012891           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN---PSAKRKFQEIRDAYETLRDSEKRAQYDR  146 (454)
Q Consensus        82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~---~~a~~~f~~i~~Ay~vL~d~~~r~~yd~  146 (454)
                      .++|.+||+.+.++.++|+++|+++++++|||+.+.+   ..++++|++|++||++|+||.+|..||+
T Consensus       382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            4899999999999999999999999999999999753   2478899999999999999999999997

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.78  E-value=4e-09  Score=79.39  Aligned_cols=54  Identities=17%  Similarity=0.204  Sum_probs=46.7

Q ss_pred             CCcccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhh
Q 012891           82 RDPYELLGVPEN---ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE  139 (454)
Q Consensus        82 ~~~Y~iLgv~~~---a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~  139 (454)
                      .+.|.||||+++   ++.++|+++||+|...+|||+.+.    .-...+|++|+++|....
T Consensus         4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~~~~   60 (65)
T 2guz_B            4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLKWEL   60 (65)
T ss_dssp             HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHHHHH
Confidence            356899999999   999999999999999999999764    356678999999997643

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=98.70  E-value=1.7e-08  Score=84.19  Aligned_cols=74  Identities=23%  Similarity=0.351  Sum_probs=60.7

Q ss_pred             cCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891          200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (454)
Q Consensus       200 ~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (454)
                      +.|.|+.+++.|+|.||+.|++.++..-                                                    
T Consensus         9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl----------------------------------------------------   36 (109)
T 3i38_A            9 IVGHNLEIVLPLAPWEAALGAKVTVPTL----------------------------------------------------   36 (109)
T ss_dssp             EETTEEEEEEEECHHHHHHCEEEEECCS----------------------------------------------------
T ss_pred             EECCEEEEEEEcCHHHHhCCCEEEEEcC----------------------------------------------------
Confidence            3588999999999999999987665421                                                    


Q ss_pred             ecccccCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcc
Q 012891          280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIF  340 (454)
Q Consensus       280 ~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f  340 (454)
                                 .+  .++|.||+|+++|++++++|+|++. .+ ..|||||+|+|.-....
T Consensus        37 -----------dG--~~~v~ip~g~~~G~~~rl~G~G~p~-~~-~~GDL~v~~~V~~P~~L   82 (109)
T 3i38_A           37 -----------KE--SILLTVPPGSQAGQRLRIKGKGLVS-KT-HTGDLFAVIKIVMPTKP   82 (109)
T ss_dssp             -----------SS--CEEEEECTTCCTTCEEEETTCSCBC-SS-CBCCEEEEEEECCCSSC
T ss_pred             -----------CC--CEEEeeCCCcCcCeEEEECCccCCC-CC-CCcCEEEEEEEECCCCC
Confidence                       11  3689999999999999999999987 34 78999999999855444

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=98.67  E-value=1.2e-08  Score=86.76  Aligned_cols=76  Identities=20%  Similarity=0.140  Sum_probs=58.5

Q ss_pred             cCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891          200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (454)
Q Consensus       200 ~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (454)
                      +.|.|+.+++.|+|.+|+.|++..+..-                                                    
T Consensus         4 R~G~DL~~~~~Isl~eAllG~~i~v~tl----------------------------------------------------   31 (121)
T 1xao_A            4 RDGDDLVYEAEIDLLTAIAGGEFALEHV----------------------------------------------------   31 (121)
T ss_dssp             EETTEEEEEEEEEHHHHHHCEEEEEECT----------------------------------------------------
T ss_pred             EECCeEEEEEEcCHHHHhCCCEEEEecC----------------------------------------------------
Confidence            3588999999999999999987665421                                                    


Q ss_pred             ecccccCCceeeceEEEEEEecCc--cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCc
Q 012891          280 HCMTCKGSGVVDGVKEVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI  339 (454)
Q Consensus       280 ~C~~C~g~G~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~  339 (454)
                                  ..+.++|.||||  +++|++++++|+|++...+...|||||+|+|.-...
T Consensus        32 ------------dG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~   81 (121)
T 1xao_A           32 ------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPEN   81 (121)
T ss_dssp             ------------TSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCT
T ss_pred             ------------CCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCC
Confidence                        012568999999  999999999999998654446799999999995544

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=98.56  E-value=1.1e-07  Score=86.59  Aligned_cols=71  Identities=20%  Similarity=0.263  Sum_probs=58.7

Q ss_pred             CCCeEEEEeeCHHHHhCCCEEEEeCCC------------CEEEEEeCCCCCCCcEEEEcCCCcC-CCCCCCCCCcEEEEE
Q 012891          344 GADVYVDSNISFTQAILGGKVDVPTLS------------GKVQVKIPKGVQPGQLLVLRGKGLA-KNGLFLDHGDQYVRF  410 (454)
Q Consensus       344 G~DL~~~~~Isl~eAllG~~~~i~tld------------G~~~v~ip~~~~~g~~~~l~g~Gmp-~~~~~~~rGdL~v~~  410 (454)
                      |.|+.+++.|||.||+.|++++|....            ..++|+||+|+.+|++++++|+|-+ ..+.  ..|||||.+
T Consensus         3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg--~~GDl~v~i   80 (180)
T 2q2g_A            3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGT--SPGDLVLII   80 (180)
T ss_dssp             -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTS--CCCEEEEEE
T ss_pred             CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCC--ccccEEEEE
Confidence            789999999999999999998887531            2378999999999999999999987 4443  369999999


Q ss_pred             EEECCC
Q 012891          411 RVNFPT  416 (454)
Q Consensus       411 ~V~~P~  416 (454)
                      +|.-..
T Consensus        81 ~~~~h~   86 (180)
T 2q2g_A           81 QTKTHP   86 (180)
T ss_dssp             EECCCS
T ss_pred             EEEecc
Confidence            987433

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.51  E-value=1e-07  Score=94.68  Aligned_cols=73  Identities=22%  Similarity=0.364  Sum_probs=57.0

Q ss_pred             ccCCCeEEEEeeCHHHHhCCCEEEEeCC------CC--------EEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEE
Q 012891          342 RDGADVYVDSNISFTQAILGGKVDVPTL------SG--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQY  407 (454)
Q Consensus       342 R~G~DL~~~~~Isl~eAllG~~~~i~tl------dG--------~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~  407 (454)
                      +.|.||.+++.|+|.||..|.+++|..-      .|        .++|+||+|+++|++|+++|+|.|..+. ...||||
T Consensus       138 ~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~g-g~~GDL~  216 (329)
T 3lz8_A          138 ARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENG-GPNGDLW  216 (329)
T ss_dssp             CCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC----CCCCCEE
T ss_pred             CCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCC-CCCCcEE
Confidence            5688899999999999998887766542      22        3689999999999999999999986421 2369999


Q ss_pred             EEEEEECC
Q 012891          408 VRFRVNFP  415 (454)
Q Consensus       408 v~~~V~~P  415 (454)
                      |+|+|.-.
T Consensus       217 v~I~v~~h  224 (329)
T 3lz8_A          217 LVIHIAPH  224 (329)
T ss_dssp             EEECCCCC
T ss_pred             EEEEEecC
Confidence            99887643

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=98.50  E-value=1.8e-07  Score=85.19  Aligned_cols=71  Identities=14%  Similarity=0.161  Sum_probs=56.3

Q ss_pred             CCCeEEEEeeCHHHHhCCCEEEEeCC------CC--------EEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEE
Q 012891          344 GADVYVDSNISFTQAILGGKVDVPTL------SG--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVR  409 (454)
Q Consensus       344 G~DL~~~~~Isl~eAllG~~~~i~tl------dG--------~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~  409 (454)
                      |.|+.+++.|||.||..|++++|..-      .|        .++|+||+|+.+|++++++|+|-+..+.  ..|||||.
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g--~~GDl~v~   79 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNN--IPADIVFV   79 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSS--CCCCEEEE
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCC--CcccEEEE
Confidence            57999999999999999999887642      23        2689999999999999999999876543  46999999


Q ss_pred             EEEECCC
Q 012891          410 FRVNFPT  416 (454)
Q Consensus       410 ~~V~~P~  416 (454)
                      ++|.-..
T Consensus        80 i~~~~h~   86 (181)
T 3agx_A           80 LKDKPHN   86 (181)
T ss_dssp             EEECCCS
T ss_pred             EEEeccc
Confidence            9997544

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=98.47  E-value=2.6e-07  Score=83.28  Aligned_cols=70  Identities=13%  Similarity=0.184  Sum_probs=57.8

Q ss_pred             CCeEEEEeeCHHHHhCCCEEEEeCC----CC-----EEEEEeCCCCCCCcEEEEcCCCcCCC-CCCCCCCcEEEEEEEEC
Q 012891          345 ADVYVDSNISFTQAILGGKVDVPTL----SG-----KVQVKIPKGVQPGQLLVLRGKGLAKN-GLFLDHGDQYVRFRVNF  414 (454)
Q Consensus       345 ~DL~~~~~Isl~eAllG~~~~i~tl----dG-----~~~v~ip~~~~~g~~~~l~g~Gmp~~-~~~~~rGdL~v~~~V~~  414 (454)
                      .|+.+++.|||.||+.|++++|...    .|     .++|+||+|+.+|++++++|+|-+.. +.  ..|||||.++|.-
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg--~~GDl~v~i~v~~   78 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTG--RRKTLQFVIQEKS   78 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSSS--CBCEEEEEEEECC
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCCC--ccccEEEEEEEcc
Confidence            3889999999999999999888753    12     37899999999999999999998543 32  3599999999975


Q ss_pred             CC
Q 012891          415 PT  416 (454)
Q Consensus       415 P~  416 (454)
                      ..
T Consensus        79 h~   80 (170)
T 1c3g_A           79 HP   80 (170)
T ss_dssp             CS
T ss_pred             CC
Confidence            43

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=97.48  E-value=4.1e-05  Score=54.89  Aligned_cols=30  Identities=37%  Similarity=0.836  Sum_probs=24.0

Q ss_pred             ccccCCCCCCceEEeeeecccccCCceeec
Q 012891          263 FTSTCSTCKGLGRIIKDHCMTCKGSGVVDG  292 (454)
Q Consensus       263 ~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~  292 (454)
                      ++.+|+.|+|+|.++.++|+.|+|.|++..
T Consensus         8 ~~~~C~~C~GsG~~i~~~C~~C~G~G~v~~   37 (53)
T 3lcz_A            8 LETTCPNCNGSGREEPEPCPKCLGKGVILT   37 (53)
T ss_dssp             HEEECTTTTTSCEETTEECTTTTTSSEEEC
T ss_pred             eeccCcCCcccccCCCCcCCCCCCcEEEEE
Confidence            456788888888888888888888887654

>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}

Probab=97.43  E-value=1.5e-05  Score=85.43  Aligned_cols=70  Identities=17%  Similarity=0.314  Sum_probs=56.3

Q ss_pred             EEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCC---ccccCCCccccceEEeC--------------C---ccc
Q 012891          206 QVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADA---KTKICSTCRGIGRVTIP--------------P---FTS  265 (454)
Q Consensus       206 ~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~---~~~~C~~C~G~G~~~~~--------------~---~~~  265 (454)
                      .+.+.|+|+|+..|.++++.+.+...|..|+|+|...+.   ...+|+.|+|.....-+              .   ...
T Consensus       168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~  247 (669)
T 3pmq_A          168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS  247 (669)
T ss_dssp             SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred             eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence            457889999999999999999999999999999998886   57899999998421100              0   135


Q ss_pred             cCCCCCCceE
Q 012891          266 TCSTCKGLGR  275 (454)
Q Consensus       266 ~C~~C~G~G~  275 (454)
                      .|..|+..+.
T Consensus       248 ~C~~CH~~~~  257 (669)
T 3pmq_A          248 NCQTCHADNP  257 (669)
T ss_dssp             CCTTTSCCCT
T ss_pred             cchhhcCCcc
Confidence            6888888764

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.40  E-value=8.6e-05  Score=61.05  Aligned_cols=48  Identities=27%  Similarity=0.711  Sum_probs=38.4

Q ss_pred             eecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeeee
Q 012891          229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH  280 (454)
Q Consensus       229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~  280 (454)
                      ...|+.|+|+|....     ....+|+.|+|.|.+    +..+|+.|+|.|.+.+.+
T Consensus        45 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----i~~~C~~C~G~G~v~~~k   97 (104)
T 2ctt_A           45 VQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSI----IISPCVVCRGAGQAKQKK   97 (104)
T ss_dssp             CEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEE----CSSCCSSSSSCSEECCCC
T ss_pred             CccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceE----CCCcCCCCCCeeEEEEEE
Confidence            468999999996521     234689999999998    467899999999987543

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=97.39  E-value=6.7e-05  Score=58.35  Aligned_cols=45  Identities=33%  Similarity=0.824  Sum_probs=32.6

Q ss_pred             eecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEe
Q 012891          229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII  277 (454)
Q Consensus       229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~  277 (454)
                      ...|+.|+|+|....     ....+|+.|+|.|.+    +..+|+.|+|.|.+.
T Consensus        28 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~G~~~   77 (79)
T 1exk_A           28 PQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL----IKDPCNKCHGHGRVE   77 (79)
T ss_dssp             CEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEE----CSSBCGGGTTSSEEE
T ss_pred             CCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEE----CCCcCCCCCCeEEEe
Confidence            467888888886432     113578888888887    356788888888774

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=96.75  E-value=0.00064  Score=48.64  Aligned_cols=24  Identities=38%  Similarity=0.933  Sum_probs=10.6

Q ss_pred             cCCCCCCceEEeeeecccccCCce
Q 012891          266 TCSTCKGLGRIIKDHCMTCKGSGV  289 (454)
Q Consensus       266 ~C~~C~G~G~~~~~~C~~C~g~G~  289 (454)
                      +|+.|+|+|.++..+|+.|.|.|.
T Consensus        11 ~C~~C~GsG~~~~~~C~~C~G~G~   34 (53)
T 2bx9_A           11 ACPKCERAGEIEGTPCPACSGKGV   34 (53)
T ss_dssp             ECTTTTTSSEETTEECTTTTTSSE
T ss_pred             cCCCCcceeccCCCCCccCCCCcc
Confidence            344444444444444444444443

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=96.71  E-value=0.00079  Score=48.14  Aligned_cols=28  Identities=36%  Similarity=0.854  Sum_probs=15.4

Q ss_pred             ccCCCccccceEEeCCccccCCCCCCceEEee
Q 012891          247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK  278 (454)
Q Consensus       247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~  278 (454)
                      .+|+.|+|+|.+    +..+|+.|+|.|.+.+
T Consensus        10 ~~C~~C~GsG~~----i~~~C~~C~G~G~v~~   37 (53)
T 3lcz_A           10 TTCPNCNGSGRE----EPEPCPKCLGKGVILT   37 (53)
T ss_dssp             EECTTTTTSCEE----TTEECTTTTTSSEEEC
T ss_pred             ccCcCCcccccC----CCCcCCCCCCcEEEEE
Confidence            345555555554    2355666666665543

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=96.54  E-value=0.0012  Score=47.16  Aligned_cols=26  Identities=31%  Similarity=0.751  Sum_probs=12.0

Q ss_pred             ecccCCCCCCccCCCccccCCCccccceE
Q 012891          230 VPCDSCHGRGFPADAKTKICSTCRGIGRV  258 (454)
Q Consensus       230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~  258 (454)
                      ..|+.|+|+|....   .+|+.|+|.|.+
T Consensus        10 ~~C~~C~GsG~~~~---~~C~~C~G~G~v   35 (53)
T 2bx9_A           10 VACPKCERAGEIEG---TPCPACSGKGVI   35 (53)
T ss_dssp             EECTTTTTSSEETT---EECTTTTTSSEE
T ss_pred             ccCCCCcceeccCC---CCCccCCCCccE
Confidence            35555555554421   334444444443

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=88.00  E-value=0.28  Score=52.82  Aligned_cols=48  Identities=15%  Similarity=0.267  Sum_probs=38.2

Q ss_pred             CCCCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHh
Q 012891           79 SSKRDPYELLGVPENASQ--DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYET  134 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~--~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~v  134 (454)
                      ....+||.+||++.++..  .+|++|||+||+..+++        .+++..|..|+.|
T Consensus       626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV  675 (681)
T ss_dssp             SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred             ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence            345679999999776655  67999999999975433        5789999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	454
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	3e-22
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	2e-21
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	2e-18
d1c3ga2	90	b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Ba	4e-18
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	8e-18
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	2e-17
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	2e-17
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	3e-17
d1exka_	79	g.54.1.1 (A:) Cysteine-rich domain of the chaperon	4e-15
d1nlta2	80	b.4.1.1 (A:258-337) Mitochondrial protein import p	6e-15
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	2e-13
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	3e-11
d1nlta3	74	g.54.1.1 (A:139-212) Mitochondrial protein import	5e-11
d1m1qa_	90	a.138.1.3 (A:) Flavocytochrome c3 (respiratory fum	2e-09
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	2e-07

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 88.6 bits (219), Expect = 3e-22
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRK------FQEIRDAY 132
           + K+D Y +LG   +A+  ++K+ +  L   YHPD    +  A         F EI  A+
Sbjct: 13  TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAW 72

Query: 133 ETLRDSEKRAQYDRRRSRGS 152
           + L + E + +YD +RS  S
Sbjct: 73  KILGNEETKKKYDLQRSGPS 92

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 85.8 bits (212), Expect = 2e-21
 Identities = 35/66 (53%), Positives = 50/66 (75%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           K+D YE+LGV + A + EI+KA+  LA +YHPD N+ +  A+ KF+EI++AYE L DS+K
Sbjct: 2   KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQK 61

Query: 141 RAQYDR 146
           RA YD+
Sbjct: 62  RAAYDQ 67

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 77.0 bits (189), Expect = 2e-18
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)

Query: 83  DPYELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPSAKR-----KFQEIRDAYETL 135
           D + L G+P     D   +   F  L +QYHPD   +   A++     +   I  A++TL
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 136 RDSEKRAQYD 145
           R    RA+Y 
Sbjct: 62  RHPLMRAEYL 71

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 90

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.9 bits (189), Expect = 4e-18
 Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 340 FSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQ-VKIPKGVQPGQLLVLRGKGLAKNG 398
           F RDG D+     +SF +++LG    + T+ G+   +   + VQP Q     G+G+    
Sbjct: 2   FKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPK 61

Query: 399 LFLDHGDQYVRFRVNFPTALNERQRAILE 427
                G+  V+++V++P +LN+ Q+  ++
Sbjct: 62  NPSQRGNLIVKYKVDYPISLNDAQKRAID 90

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 76.1 bits (187), Expect = 8e-18
 Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAK---RKFQEIRDAYETLR 136
           +    ++ +G+ +  + +++KK +       HPD     P  +     F E+ DA+    
Sbjct: 31  AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFE 90

Query: 137 DSEKRAQY 144
           +  ++  Y
Sbjct: 91  NQGQKPLY 98

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 2e-17
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 72  HATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSA-KRKFQEIRD 130
           H      S  ++   ++       + E KK    L  ++HPD N  N       F+ +++
Sbjct: 6   HHLVPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQN 65

Query: 131 AYETLRDSEKRAQYDRRRSRGS 152
               L   EK+A  D+   R S
Sbjct: 66  EINRL---EKQAFLDQNADRAS 84

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.8 bits (183), Expect = 2e-17
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
            +D Y+ LG+   AS +EIK+A+   A +YHPD N   P A+ KF+EI +AY+ L D  K
Sbjct: 2   GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKN-KEPGAEEKFKEIAEAYDVLSDPRK 60

Query: 141 RAQYDRRRSRGSENE 155
           R  +DR    G +  
Sbjct: 61  REIFDRYGEEGLKGS 75

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 73.9 bits (181), Expect = 3e-17
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 79  SSKRDPYELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136
           + K    ELL +P     D   +++A+   +   HPD   ++       QE+   + T +
Sbjct: 8   ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHA----LMQELNSLWGTFK 63

Query: 137 DSEKRAQYDRRRS 149
                 + +   +
Sbjct: 64  TEVYNLRMNLGGT 76

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]} Length = 79

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

 Score = 68.2 bits (166), Expect = 4e-15
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPP----FTSTCSTCKGLG 274
           G TK +       CD CHG G     + + C TC G G+V +         TC  C+G G
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRG 60

Query: 275 RIIKDHCMTCKGSGVV 290
            +IKD C  C G G V
Sbjct: 61  TLIKDPCNKCHGHGRV 76

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.7 bits (165), Expect = 6e-15
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 8/81 (9%)

Query: 340 FSRDGADVYVDSNISFTQAILGGKVDVPTLSG---KVQVKIPKGVQPGQLLVLRGKGL-- 394
           F RDG D+  ++ I    AI GG+  +  +SG   KV +   + + PG   V+ GKG+  
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 395 AKNGLFLDHGDQYVRFRVNFP 415
            K G    +G+  ++F +  P
Sbjct: 62  PKYG---GYGNLIIKFTIKDP 79

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 64.4 bits (156), Expect = 2e-13
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 81  KRDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
                +LLG+  +A  +   ++KA+    K++HPD   +      K +++   Y+ + D 
Sbjct: 7   SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEE----KMKKMNTLYKKMEDG 62

Query: 139 EKRAQYDRRRSRGSENEKYSAGDAEGFRY 167
            K A            E  + G  E  ++
Sbjct: 63  VKYAHQPDFGGFWDATEIPTYGTDEWEQW 91

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.8 bits (137), Expect = 3e-11
 Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 3/70 (4%)

Query: 269 TCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNL 328
              G  +  K       G+       ++ + +  G  +G  I     G+   +  +   L
Sbjct: 14  LFVGKKKSFKIGRKGPHGAS---EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTL 70

Query: 329 FIKLKVADDP 338
              ++    P
Sbjct: 71  QFVIQEKSHP 80

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.2 bits (135), Expect = 5e-11
 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 11/71 (15%)

Query: 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRII--KD 279
           + C  C GRG       K C++C G G   +          F + C  C G G II  KD
Sbjct: 3   ILCKECEGRGG-KKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKD 61

Query: 280 HCMTCKGSGVV 290
            C +C G  V 
Sbjct: 62  RCKSCNGKKVE 72

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Length = 90

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

 Score = 52.5 bits (125), Expect = 2e-09
 Identities = 14/74 (18%), Positives = 20/74 (27%), Gaps = 11/74 (14%)

Query: 228 AFVPCDSCHGRGFPADAKT---KICSTCRGIGRVTIPPFT--------STCSTCKGLGRI 276
               C+SCH  G P+         C +C G                  + C     +   
Sbjct: 10  ESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVG 69

Query: 277 IKDHCMTCKGSGVV 290
            K  C +C   G  
Sbjct: 70  QKPTCESCHDDGRT 83

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.2 bits (109), Expect = 2e-07
 Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 342 RDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFL 401
           + G D+  + + S  +   G    +      ++V +  G++ GQ +V +G+        +
Sbjct: 2   QRGKDIKHEISASLEELYKGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQ--APDV 59

Query: 402 DHGDQYVRFRV 412
             GD       
Sbjct: 60  IPGDVVFIVSE 70

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	454
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.91
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.89
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.81
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.8
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.78
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.7
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.69
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.64
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.63
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.63
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.58
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	99.5
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.38
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	99.11
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.71
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	98.63
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.55
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	97.56
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	97.07
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	96.1

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.4e-25  Score=180.39  Aligned_cols=89  Identities=27%  Similarity=0.525  Sum_probs=83.6

Q ss_pred             cccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCC
Q 012891          339 IFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTA  417 (454)
Q Consensus       339 ~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~  417 (454)
                      .|+|+|+||+++++|++.||++|++++|+|+||+ +.|++|+++++|++++|+|+|||..+....+|||||+|+|++|++
T Consensus         1 ~F~R~G~DL~~~~~I~~~eal~G~~~~i~~~dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~   80 (90)
T d1c3ga2           1 NFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPIS   80 (90)
T ss_dssp             SEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSS
T ss_pred             CCeEeCCeEEEEEEeCHHHHhcCCeEEEecccccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCC
Confidence            4899999999999999999999999999999995 799999999999999999999998755556899999999999999


Q ss_pred             CCHHHHHHHH
Q 012891          418 LNERQRAILE  427 (454)
Q Consensus       418 ls~~q~~~l~  427 (454)
                      ||++|+++||
T Consensus        81 ls~~qk~~lE   90 (90)
T d1c3ga2          81 LNDAQKRAID   90 (90)
T ss_dssp             CCTTHHHHTC
T ss_pred             CCHHHHHhhC
Confidence            9999999885

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=9.5e-24  Score=163.61  Aligned_cols=72  Identities=49%  Similarity=0.797  Sum_probs=67.6

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS  152 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~  152 (454)
                      .+|||+||||+++||.+|||+|||+|++++|||++++++.++++|++|++||+||+||.+|..||++|..+.
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~   73 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF   73 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCcccc
Confidence            479999999999999999999999999999999999888889999999999999999999999999976543

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=4.3e-22  Score=155.06  Aligned_cols=71  Identities=45%  Similarity=0.776  Sum_probs=66.2

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCC
Q 012891           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS  152 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~  152 (454)
                      .+|||+||||+++||.+||++||++|++++|||++. ++++.++|+.|++||+||+||.+|+.||++|..+.
T Consensus         2 ~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~-~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~   72 (77)
T d1hdja_           2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL   72 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred             CCChHHHcCCCCCcCHHHHHHHHHHHHHHhcccccc-chhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhh
Confidence            579999999999999999999999999999999997 46788999999999999999999999999976654

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=8.3e-21  Score=148.86  Aligned_cols=77  Identities=31%  Similarity=0.580  Sum_probs=70.6

Q ss_pred             cccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC
Q 012891          339 IFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP  415 (454)
Q Consensus       339 ~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~--~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P  415 (454)
                      .|+|+|+||+++++|++.||++|++++|+|+||. ++|+||++  +++|++++|+|+|||..+. ..+|||||+|+|++|
T Consensus         1 tF~R~G~dL~~~~~I~~~eal~G~~~~i~~~dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~V~~P   79 (80)
T d1nlta2           1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKY-GGYGNLIIKFTIKDP   79 (80)
T ss_dssp             SCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSS-CSBCCEEEEEEEECC
T ss_pred             CcEEeCCEEEEEEEeCHHHHhCCCEEEEEecCcceEEEEeCCCCCcCCCCEEEecCCCCCCCCc-CCcCcEEEEEEEEcC
Confidence            4999999999999999999999999999999996 67888876  8999999999999998843 358999999999999


Q ss_pred             C
Q 012891          416 T  416 (454)
Q Consensus       416 ~  416 (454)
                      +
T Consensus        80 k   80 (80)
T d1nlta2          80 E   80 (80)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=9.5e-21  Score=152.83  Aligned_cols=70  Identities=31%  Similarity=0.595  Sum_probs=63.8

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN------PSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (454)
Q Consensus        79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~  148 (454)
                      .+..|||+||||+++|+.+|||+||++|+++||||+++.+      +.++++|+.|++||+||+||.+|+.||...
T Consensus        13 ~~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~   88 (94)
T d1wjza_          13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR   88 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred             hhccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHcc
Confidence            3457999999999999999999999999999999998754      347889999999999999999999999873

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.78  E-value=2.5e-20  Score=156.01  Aligned_cols=65  Identities=23%  Similarity=0.390  Sum_probs=59.8

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 012891           82 RDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSR  150 (454)
Q Consensus        82 ~~~Y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~  150 (454)
                      .+||+||||+++|  +.++||+|||+||+++|||++++    .++|++|++||+||+||.+|+.||.++..
T Consensus         8 ~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~----~e~F~~I~~AY~vLsd~~kR~~YD~~~~~   74 (114)
T d1gh6a_           8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGF   74 (114)
T ss_dssp             HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhh----HHHHHHHHHHHHHhCCHHHHHHHhccCCC
Confidence            6899999999999  78899999999999999999975    36899999999999999999999998543

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.70  E-value=3e-18  Score=132.90  Aligned_cols=64  Identities=19%  Similarity=0.309  Sum_probs=58.9

Q ss_pred             CCCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891           81 KRDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (454)
Q Consensus        81 ~~~~Y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~  148 (454)
                      ..+||+||||++++  +.++||+|||+|+++||||++++    .++|++||+||++|+|+.+|..||..+
T Consensus        10 ~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~----~e~~~~in~Ay~~L~d~~~r~~~~~~~   75 (79)
T d1fafa_          10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMNLGG   75 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCC----HHHHHHHHHHHHHHCCHHHHHHHccCC
Confidence            46899999999987  99999999999999999999864    478999999999999999999999863

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=5.4e-18  Score=131.21  Aligned_cols=66  Identities=30%  Similarity=0.496  Sum_probs=58.2

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891           82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRR  147 (454)
Q Consensus        82 ~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~  147 (454)
                      .|||++|||+++  ++.+|||+||+++++++|||+..+.+.     +.+.|+.|++||+||+||.+|+.|+..
T Consensus         1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll~   73 (76)
T d1fpoa1           1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLS   73 (76)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            489999999985  558999999999999999999865432     667899999999999999999999864

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.1e-17  Score=129.85  Aligned_cols=70  Identities=21%  Similarity=0.279  Sum_probs=60.4

Q ss_pred             CCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891           76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (454)
Q Consensus        76 ~~~~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~  148 (454)
                      +....-.++|+||+|+.+||.+|||+|||+|+++||||++++++ .|.++|+.|++||++|++   +..||...
T Consensus        10 ~r~~~~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~---~~~~d~~~   80 (88)
T d1iura_          10 PRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK---QAFLDQNA   80 (88)
T ss_dssp             CSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH---HTTCSSSS
T ss_pred             cchhHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH---HHHhhccc
Confidence            33344579999999999999999999999999999999998765 488999999999999975   56677663

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.63  E-value=2.3e-16  Score=123.07  Aligned_cols=80  Identities=16%  Similarity=0.257  Sum_probs=67.9

Q ss_pred             CCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecc
Q 012891          203 PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCM  282 (454)
Q Consensus       203 ~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~  282 (454)
                      ++++++|.|||||+|+|+++++++.+..                     |+|.                           
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~---------------------~~g~---------------------------   32 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG---------------------PHGA---------------------------   32 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEE---------------------TTTE---------------------------
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceec---------------------ccCC---------------------------
Confidence            4689999999999999999999876432                     1111                           


Q ss_pred             cccCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891          283 TCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP  338 (454)
Q Consensus       283 ~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~  338 (454)
                              .+.++++|.||||+++|++|+|+|+|++.+.++.+|||+|+|++++||
T Consensus        33 --------~~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~~~HP   80 (80)
T d1c3ga1          33 --------SEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHP   80 (80)
T ss_dssp             --------EEEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCS
T ss_pred             --------CceEEEEEEECCCCCCCcEEEECCccccCcCCCCCCCEEEEEEeCCCC
Confidence                    134679999999999999999999999987777899999999999997

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.63  E-value=4.1e-17  Score=132.07  Aligned_cols=65  Identities=22%  Similarity=0.471  Sum_probs=59.1

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHhhhhhhhhhhh
Q 012891           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRDSEKRAQY  144 (454)
Q Consensus        80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~---~a~~~f~~i~~Ay~vL~d~~~r~~y  144 (454)
                      ...++|++||++..+|.+|||+|||++++++|||++++.+   .|++.|+.|++||++|+||.+|+.|
T Consensus        31 ~~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          31 AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             TTCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            3467899999999999999999999999999999987654   2778999999999999999999988

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.58  E-value=1.7e-15  Score=116.21  Aligned_cols=74  Identities=19%  Similarity=0.280  Sum_probs=65.9

Q ss_pred             ccCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEee
Q 012891          199 SHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK  278 (454)
Q Consensus       199 ~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~  278 (454)
                      ++++.|++++|.|||+|||.|+++++.+.                                                   
T Consensus         1 Prkg~di~~~l~isleea~~G~~~~~~~~---------------------------------------------------   29 (74)
T d1nlta1           1 PQRGKDIKHEISASLEELYKGRTAKLALN---------------------------------------------------   29 (74)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEE---------------------------------------------------
T ss_pred             CCCCCCEEEEEEecHHHHHhhcccceeec---------------------------------------------------
Confidence            35789999999999999999999887642                                                   


Q ss_pred             eecccccCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891          279 DHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP  338 (454)
Q Consensus       279 ~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~  338 (454)
                                    .+.++|.||||+++|++|+|+|+|++.+ ++.+|||+|+|+++||.
T Consensus        30 --------------~~~~~i~Ip~G~~~G~~ir~~g~G~~~~-~~~~GDl~v~i~~~pHk   74 (74)
T d1nlta1          30 --------------RKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHK   74 (74)
T ss_dssp             --------------EEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCS
T ss_pred             --------------CccEEEEecccccCCeEEEecCCcCCCC-CCCCCCEEEEEEecCCC
Confidence                          3578999999999999999999999975 77899999999999995

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=5.3e-15  Score=114.86  Aligned_cols=74  Identities=38%  Similarity=0.885  Sum_probs=67.2

Q ss_pred             CcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeec
Q 012891          219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG  292 (454)
Q Consensus       219 G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~  292 (454)
                      |++++|.|++.+.|+.|+|+|...+....+|+.|+|.|++.+.    .++.+|+.|+|+|+++.++|..|+|.|++++
T Consensus         1 G~~k~i~i~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~k   78 (79)
T d1exka_           1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVER   78 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSSBCGGGTTSSEEEC
T ss_pred             CceEEEEeeeeccCCCCcCcccCCCccceeCCCccceeEEEEecccceeeEECcccCcceeECCCCCCCCCCceEeec
Confidence            6789999999999999999999988888999999999987654    2477899999999999999999999998865

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.38  E-value=3.8e-13  Score=102.88  Aligned_cols=70  Identities=17%  Similarity=0.266  Sum_probs=63.8

Q ss_pred             ccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 012891          342 RDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN  413 (454)
Q Consensus       342 R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~  413 (454)
                      |+|.|++++++|||.||++|+++.|.+..+.+.|+||+|+.+|++++++|+|.+..+.  .+|||+|++++.
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~~~~~~~i~Ip~G~~~G~~ir~~g~G~~~~~~--~~GDl~v~i~~~   71 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQAPDV--IPGDVVFIVSER   71 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTC--BCCCEEEEEEEC
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceeecCccEEEEecccccCCeEEEecCCcCCCCCC--CCCCEEEEEEec
Confidence            7899999999999999999999999987777899999999999999999999886653  369999999875

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.11  E-value=1.4e-11  Score=93.88  Aligned_cols=64  Identities=38%  Similarity=0.853  Sum_probs=53.2

Q ss_pred             eeecccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEe--eeecccccCCceeec
Q 012891          228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRII--KDHCMTCKGSGVVDG  292 (454)
Q Consensus       228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~--~~~C~~C~g~G~~~~  292 (454)
                      |.+.|+.|+|+|...+. ..+|+.|+|+|.+...        .+..+|+.|+|+|+++  +++|..|+|.|++++
T Consensus         1 r~v~C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~E   74 (74)
T d1nlta3           1 KQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENE   74 (74)
T ss_dssp             EEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTTSBCSSSTTSCEEEE
T ss_pred             CccCCcCCcccccCCCC-CCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCCCCCCCCCCeeEeCC
Confidence            56899999999998764 5689999999987532        2367899999999987  468999999998764

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.71  E-value=1.6e-08  Score=77.70  Aligned_cols=68  Identities=13%  Similarity=0.212  Sum_probs=55.9

Q ss_pred             CCeEEEEeeCHHHHhCCCEEEEeC----CCC-----EEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 012891          345 ADVYVDSNISFTQAILGGKVDVPT----LSG-----KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN  413 (454)
Q Consensus       345 ~DL~~~~~Isl~eAllG~~~~i~t----ldG-----~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~  413 (454)
                      +||.++++|||.||..|+++.|..    .+|     .+.|.||+|+.+|++++++|+|....+. ...|||+|.+++.
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~~~i~~~   77 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQT-GRRKTLQFVIQEK   77 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSS-SCBCEEEEEEEEC
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceecccCCCceEEEEEEECCCCCCCcEEEECCccccCcCC-CCCCCEEEEEEeC
Confidence            478999999999999999876653    455     2689999999999999999999876532 2359999999875

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.63  E-value=1.7e-08  Score=77.60  Aligned_cols=72  Identities=21%  Similarity=0.187  Sum_probs=59.6

Q ss_pred             cCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891          200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (454)
Q Consensus       200 ~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (454)
                      +.|.|+.++++|+|.||+.|+++++...                                                    
T Consensus         4 R~G~dL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (80)
T d1nlta2           4 RDGDDLVYEAEIDLLTAIAGGEFALEHV----------------------------------------------------   31 (80)
T ss_dssp             EETTEEEEEEEEEHHHHHHCBCCEEECS----------------------------------------------------
T ss_pred             EeCCEEEEEEEeCHHHHhCCCEEEEEec----------------------------------------------------
Confidence            4588999999999999999998776531                                                    


Q ss_pred             ecccccCCceeeceEEEEEEecCc--cCCCCEEEECCCcCCCCCCCCCccEEEEEEEe
Q 012891          280 HCMTCKGSGVVDGVKEVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVA  335 (454)
Q Consensus       280 ~C~~C~g~G~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~  335 (454)
                                  ....++|.||++  +++|++++++|+|.+...+...|||+|+++|+
T Consensus        32 ------------dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~V~   77 (80)
T d1nlta2          32 ------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIK   77 (80)
T ss_dssp             ------------SSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEE
T ss_pred             ------------CcceEEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcEEEEEEEE
Confidence                        113456677776  99999999999999877677789999999987

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.55  E-value=2.2e-08  Score=78.76  Aligned_cols=74  Identities=26%  Similarity=0.293  Sum_probs=60.9

Q ss_pred             cCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891          200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (454)
Q Consensus       200 ~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (454)
                      ++|.|+.+.+.|+|.||+.|++.++..-                                                    
T Consensus         4 R~G~DL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (90)
T d1c3ga2           4 RDGDDLIYTLPLSFKESLLGFSKTIQTI----------------------------------------------------   31 (90)
T ss_dssp             EETTEEEEEECCBHHHHHHCEEEEEECS----------------------------------------------------
T ss_pred             EeCCeEEEEEEeCHHHHhcCCeEEEecc----------------------------------------------------
Confidence            4588999999999999999998776521                                                    


Q ss_pred             ecccccCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCC-CCCCccEEEEEEEecC
Q 012891          280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGR-GRQHGNLFIKLKVADD  337 (454)
Q Consensus       280 ~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-g~~~GDL~v~i~v~~h  337 (454)
                                  ..++++|.||+|+++|++++++|+|.+... .+..|||+|+++|.-.
T Consensus        32 ------------dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P   78 (90)
T d1c3ga2          32 ------------DGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYP   78 (90)
T ss_dssp             ------------SSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCC
T ss_pred             ------------cccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcC
Confidence                        123678999999999999999999997543 3567999999998843

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=1.4e-05  Score=60.53  Aligned_cols=46  Identities=33%  Similarity=0.826  Sum_probs=36.4

Q ss_pred             eecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEee
Q 012891          229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK  278 (454)
Q Consensus       229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~  278 (454)
                      ...|+.|+|+|....     ....+|+.|+|+|.+    +..+|..|+|+|++.+
T Consensus        28 ~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~----i~~~C~~C~G~G~v~k   78 (79)
T d1exka_          28 PQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL----IKDPCNKCHGHGRVER   78 (79)
T ss_dssp             CEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEE----CSSBCGGGTTSSEEEC
T ss_pred             ceeCCCccceeEEEEecccceeeEECcccCcceeE----CCCCCCCCCCceEeec
Confidence            457999999996532     224689999999998    4578999999998864

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.07  E-value=9.9e-05  Score=54.96  Aligned_cols=46  Identities=26%  Similarity=0.593  Sum_probs=35.2

Q ss_pred             ecccCCCCCCccCCC---------ccccCCCccccceEEeCCccccCCCCCCceEEe
Q 012891          230 VPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII  277 (454)
Q Consensus       230 ~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~  277 (454)
                      ..|+.|+|+|.....         ....|+.|+|+|.+..  ...+|..|+|+|.+.
T Consensus        19 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~--~~~~C~~C~G~g~v~   73 (74)
T d1nlta3          19 KKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIID--PKDRCKSCNGKKVEN   73 (74)
T ss_dssp             CCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCC--TTSBCSSSTTSCEEE
T ss_pred             CCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeC--CCCCCCCCCCeeEeC
Confidence            469999999975421         2468999999998632  245899999999764

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=96.10  E-value=0.00021  Score=54.95  Aligned_cols=61  Identities=23%  Similarity=0.513  Sum_probs=47.1

Q ss_pred             cccCCCCCCccCCCc---cccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceee
Q 012891          231 PCDSCHGRGFPADAK---TKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVD  291 (454)
Q Consensus       231 ~C~~C~G~G~~~~~~---~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~  291 (454)
                      .|..|+|.|......   ...|..|+|.|.....        ..-..|..|+|.|..+.+.|..|++.|.+.
T Consensus        13 ~C~~CH~~~~~~~~~~~~~~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~~~~~C~~CH~~gr~~   84 (90)
T d1m1qa_          13 GCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTS   84 (90)
T ss_dssp             CGGGTSGGGCCCSSSHHHHHHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTTCCCCSTTTCSSCCCH
T ss_pred             CCCCcCCCCccccCCCCCCCcCcccCCCceeEeeccccccCccccccCccccCCCCcCCCccccccCCCccc
Confidence            699999988654332   4679999999875432        124678899999998999999999998653