Citrus Sinensis ID: 012932


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450---
MREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASASAKLKSA
cccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccEEEEEEEcccccccccEEEEEEEEEEcccccEEEEcccccccccccEEEEcccccccccEEEEEEEEEEEcccccEEEEEEccEEEEEEEEEEEEEEEEEEEEEEEcccccccEEEEEcccccccEEEEcccccEEEEEEEEEcccccccccEEEEEEEEcccEEEEEEEEEccccEEEEEEcccccccccccccccEEEEEEEEEcccccccEEEEEEEEEccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
cccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccEEEEEEEEcccccEccccccEEEEEEEccccccccccEEEEEEEEEccccEEEEEcccccccccccEEEEEcccccccccEEEEEEEEEEccccccEEEEEcEEEEEEEEEEEEEEEEEEEEEEEEccccccccEEEEEcccccccEEEcccccEEEEEEEEEccccccccccEEEEEEEcccccEEEEEEEcccccEEEEEccccccHHHccccccEEEEEEEEccccccccccccEEEEEEcccccccccccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
mreqqgplattssVVRGLTAFSSVITESLNLTGDKILGIAKFFlgigipgdtknffDQVDSLAclennrvsiplilslpstvisltkkdslKVKVNtvlgshapplTVTLVRAFsssardnsiienqelkfdpqdavyflddlpasfdvgEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAvldsdlgsvetQKKLDLAGESTVSVSANHLQKLRLSfqmstplgnafkphQAFLRLRhetkvehtfvvgssgkkfeITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLlrdigyveldlpeppenasrpppqpvdpytrygpkaeithifrapekrppqeLSLAFLVLTILPLFGFIIGLLRLgvnlknfptsavpaTFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASASAKLKSA
mreqqgplattssvvrgLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNtvlgshappltVTLVRAFSSSARDNSIIenqelkfdpqDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHtfvvgssgkkfeITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEPpenasrpppqpvdPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLShlasasaklksa
MREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLpeppenasrpppqpVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVltilplfgfiigllrlgVNLKNFPTSAVPATFAVIFHLGIAAVlllyvlfwlkldlfttlktlcflGVFLMVVGHRTlshlasasaklksa
*************VVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVE**************V*ANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELD***************************ITHIF**********LSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSH***********
*****GPLATTSSVVRGLTAFSSVI********DKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLP************KVKVNTVLGSHAPPLTVTLV*********************PQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIA*****************************LQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDL********************YGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLS************
***********SSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPE**********QPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLA*********
***QQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEP*********QP**PYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASAS******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
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MREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASASAKLKSA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query453 2.2.26 [Sep-21-2011]
Q93Z16691 Dolichyl-diphosphooligosa yes no 0.991 0.649 0.677 0.0
Q5N7W3698 Dolichyl-diphosphooligosa yes no 0.988 0.641 0.616 1e-165
Q5RBM1631 Dolichyl-diphosphooligosa yes no 0.799 0.573 0.300 8e-33
P04844631 Dolichyl-diphosphooligosa yes no 0.794 0.570 0.296 7e-32
Q3SZI6631 Dolichyl-diphosphooligosa yes no 0.788 0.565 0.293 1e-29
Q9DBG6631 Dolichyl-diphosphooligosa yes no 0.790 0.567 0.290 2e-29
P25235631 Dolichyl-diphosphooligosa yes no 0.790 0.567 0.290 5e-29
Q9GL01629 Dolichyl-diphosphooligosa yes no 0.779 0.561 0.294 6e-26
Q54HG9685 Dolichyl-diphosphooligosa yes no 0.774 0.512 0.253 3e-19
>sp|Q93Z16|RPN2_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Arabidopsis thaliana GN=RPN2 PE=2 SV=1 Back     alignment and function desciption
 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/449 (67%), Positives = 374/449 (83%)

Query: 5   QGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLAC 64
           QGP++TT+SV+RGLT+F++  +  LNL GDKI+G+AKFFLG+GIPGD K+FF+Q+D+LAC
Sbjct: 243 QGPISTTASVIRGLTSFAASESTGLNLPGDKIVGLAKFFLGVGIPGDAKDFFNQIDALAC 302

Query: 65  LENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSII 124
           LE+N+ S+PLILSLPSTVISLTKK+ LKVKV+TVLGS AP L+V L +A SS + D+S+I
Sbjct: 303 LEDNKFSVPLILSLPSTVISLTKKEPLKVKVSTVLGSKAPALSVKLTQALSSKSVDSSVI 362

Query: 125 ENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGL 184
            NQELKFD   A YFLD  P +FD+G+Y FVFK+++ +S  + VY T   T+VPI  TG 
Sbjct: 363 NNQELKFDADSATYFLDSFPKNFDIGKYTFVFKIVLDESAHEKVYITEAQTKVPIAATGA 422

Query: 185 IKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQ 244
           I IENA+IAVLDSD+GSVE+QKKLDL  +  VS+SANHLQKLRLSFQ++TPLGNAFKPHQ
Sbjct: 423 ISIENAEIAVLDSDIGSVESQKKLDLTKDGAVSLSANHLQKLRLSFQLTTPLGNAFKPHQ 482

Query: 245 AFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLL 304
           AF +L+HE++VEH F+V +SGKK E+ LDFLGLVEK +YLSG+Y+IQLT+GDA MENSLL
Sbjct: 483 AFFKLKHESQVEHIFLVKTSGKKSELVLDFLGLVEKLYYLSGKYEIQLTIGDASMENSLL 542

Query: 305 RDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLT 364
            +IG++ELDLPE PE A+RPP Q  +PY+RYGPKAEI+HIFR PEK P ++LSL FL + 
Sbjct: 543 SNIGHIELDLPERPEKATRPPLQSTEPYSRYGPKAEISHIFRIPEKLPAKQLSLVFLGVI 602

Query: 365 ILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKT 424
           +LP  GF+IGL RLGVN+K+FP+S   A  A++FH GI AVLLLYVLFWLKLDLFTTLK 
Sbjct: 603 VLPFIGFLIGLTRLGVNIKSFPSSTGSAISALLFHCGIGAVLLLYVLFWLKLDLFTTLKA 662

Query: 425 LCFLGVFLMVVGHRTLSHLASASAKLKSA 453
           L  LGVFL+ VGHRTLS LASAS KLKSA
Sbjct: 663 LSLLGVFLLFVGHRTLSQLASASNKLKSA 691




Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 9EC: 9EC: .EC: 1EC: 8
>sp|Q5N7W3|RPN2_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Oryza sativa subsp. japonica GN=RPN2 PE=2 SV=1 Back     alignment and function description
>sp|Q5RBM1|RPN2_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Pongo abelii GN=RPN2 PE=2 SV=1 Back     alignment and function description
>sp|P04844|RPN2_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Homo sapiens GN=RPN2 PE=1 SV=3 Back     alignment and function description
>sp|Q3SZI6|RPN2_BOVIN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Bos taurus GN=RPN2 PE=2 SV=1 Back     alignment and function description
>sp|Q9DBG6|RPN2_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Mus musculus GN=Rpn2 PE=2 SV=1 Back     alignment and function description
>sp|P25235|RPN2_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus GN=Rpn2 PE=2 SV=2 Back     alignment and function description
>sp|Q9GL01|RPN2_PIG Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Sus scrofa GN=RPN2 PE=2 SV=1 Back     alignment and function description
>sp|Q54HG9|RPN2_DICDI Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit swp1 OS=Dictyostelium discoideum GN=swp1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query453
356505035 687 PREDICTED: dolichyl-diphosphooligosaccha 0.995 0.656 0.725 0.0
356572268 688 PREDICTED: dolichyl-diphosphooligosaccha 0.995 0.655 0.718 0.0
449443532 679 PREDICTED: dolichyl-diphosphooligosaccha 0.969 0.646 0.725 0.0
297744165 756 unnamed protein product [Vitis vinifera] 0.997 0.597 0.767 0.0
359480291 690 PREDICTED: dolichyl-diphosphooligosaccha 0.997 0.655 0.767 0.0
224062133 694 predicted protein [Populus trichocarpa] 0.995 0.649 0.727 0.0
255577958 699 ribophorin II, putative [Ricinus communi 0.991 0.642 0.718 0.0
356537059 689 PREDICTED: dolichyl-diphosphooligosaccha 0.997 0.656 0.719 0.0
22328844 691 ribophorin II (RPN2) family protein [Ara 0.991 0.649 0.677 1e-180
297804040 693 ribophorin II family protein [Arabidopsi 0.991 0.647 0.674 1e-180
>gi|356505035|ref|XP_003521298.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] Back     alignment and taxonomy information
 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/452 (72%), Positives = 388/452 (85%), Gaps = 1/452 (0%)

Query: 2   REQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDS 61
           RE QG L+TTSSVVRG+TAF++V +  +NL GDKILG+A FFLGIGIPGD K+FF+QV+S
Sbjct: 237 REHQGSLSTTSSVVRGVTAFAAVTSGKINLPGDKILGLANFFLGIGIPGDAKDFFNQVES 296

Query: 62  LACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDN 121
           LA LENN+VSIPL+LSLP+TV SL+KKD LKV+VNTVLGS APPLTV LV+AF S+A+D 
Sbjct: 297 LALLENNKVSIPLVLSLPATVYSLSKKDQLKVRVNTVLGSAAPPLTVKLVQAFRSNAKD- 355

Query: 122 SIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYV 181
           S IE++EL++D  + ++FL+  P + DVG Y+FVF++ + DS  + VYATG    VPIYV
Sbjct: 356 SAIESKELQYDQNNGIHFLEAFPDNVDVGTYVFVFEIALHDSAGEKVYATGGQIHVPIYV 415

Query: 182 TGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFK 241
           TG+IK+ NA+IAVLDSDLGSVETQK LDLAG   VS+SANHLQKLR SFQ++TP G+AFK
Sbjct: 416 TGIIKVSNAEIAVLDSDLGSVETQKTLDLAGNDDVSLSANHLQKLRFSFQLTTPHGHAFK 475

Query: 242 PHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMEN 301
           PHQAF +L+HETK EH FVVG++G+KFEI LDFLGLVEKF+YLSGRYDI+LTVGD VMEN
Sbjct: 476 PHQAFFKLKHETKHEHIFVVGNTGRKFEIILDFLGLVEKFYYLSGRYDIELTVGDTVMEN 535

Query: 302 SLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFL 361
           S LR +G V+LDLPE PE A+R PP PVDPY+RYGPKAEI H+FRAPEKRPPQELSL FL
Sbjct: 536 SFLRLLGEVDLDLPEAPEKAARLPPLPVDPYSRYGPKAEIAHLFRAPEKRPPQELSLTFL 595

Query: 362 VLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTT 421
            L +LP  GF++GLLRLGVNLKNFP+SAVPAT+A +FHLGIAAVLLLYVLFWLKLDLFTT
Sbjct: 596 GLILLPFIGFLVGLLRLGVNLKNFPSSAVPATYAFLFHLGIAAVLLLYVLFWLKLDLFTT 655

Query: 422 LKTLCFLGVFLMVVGHRTLSHLASASAKLKSA 453
           LKT+ FLG FL+ VGHR LSHLAS S+KLKSA
Sbjct: 656 LKTVGFLGAFLLFVGHRILSHLASTSSKLKSA 687




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572268|ref|XP_003554291.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] Back     alignment and taxonomy information
>gi|449443532|ref|XP_004139531.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucumis sativus] gi|449508984|ref|XP_004163460.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297744165|emb|CBI37135.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359480291|ref|XP_002272576.2| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224062133|ref|XP_002300771.1| predicted protein [Populus trichocarpa] gi|222842497|gb|EEE80044.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255577958|ref|XP_002529851.1| ribophorin II, putative [Ricinus communis] gi|223530679|gb|EEF32552.1| ribophorin II, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356537059|ref|XP_003537048.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] Back     alignment and taxonomy information
>gi|22328844|ref|NP_193847.2| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|334186764|ref|NP_001190785.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|75163691|sp|Q93Z16.1|RPN2_ARATH RecName: Full=Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; AltName: Full=Protein HAPLESS 6; AltName: Full=Ribophorin II; Short=RPN-II; AltName: Full=Ribophorin-2; Flags: Precursor gi|16604454|gb|AAL24233.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gi|18958022|gb|AAL79584.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gi|332659008|gb|AEE84408.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|332659010|gb|AEE84410.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297804040|ref|XP_002869904.1| ribophorin II family protein [Arabidopsis lyrata subsp. lyrata] gi|297315740|gb|EFH46163.1| ribophorin II family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query453
TAIR|locus:2127328691 HAP6 "HAPLESS 6" [Arabidopsis 0.960 0.629 0.581 3.1e-131
UNIPROTKB|P04844631 RPN2 "Dolichyl-diphosphooligos 0.728 0.522 0.268 1.7e-20
UNIPROTKB|F1PBH2562 RPN2 "Uncharacterized protein" 0.728 0.587 0.265 4.2e-20
UNIPROTKB|F1PCT7647 RPN2 "Uncharacterized protein" 0.728 0.510 0.265 5.8e-20
UNIPROTKB|Q3SZI6631 RPN2 "Dolichyl-diphosphooligos 0.728 0.522 0.262 4.1e-19
ZFIN|ZDB-GENE-030131-7928643 rpn2 "ribophorin II" [Danio re 0.730 0.514 0.254 7.4e-19
FB|FBgn0034277634 OstDelta "Oligosaccharide tran 0.830 0.593 0.246 1.7e-18
MGI|MGI:98085631 Rpn2 "ribophorin II" [Mus musc 0.728 0.522 0.262 3.7e-18
UNIPROTKB|D4A8V6612 Rpn2 "Dolichyl-diphosphooligos 0.728 0.539 0.262 4.7e-18
UNIPROTKB|E1C8Z0631 RPN2 "Dolichyl-diphosphooligos 0.726 0.521 0.261 5e-18
TAIR|locus:2127328 HAP6 "HAPLESS 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
 Identities = 253/435 (58%), Positives = 319/435 (73%)

Query:     5 QGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLAC 64
             QGP++TT+SV+RGLT+F++  +  LNL GDKI+G+AKFFLG+GIPGD K+FF+Q+D+LAC
Sbjct:   243 QGPISTTASVIRGLTSFAASESTGLNLPGDKIVGLAKFFLGVGIPGDAKDFFNQIDALAC 302

Query:    65 LENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSII 124
             LE+N+ S+PLILSLPSTVISLTKK+ LKVKV+TVLGS AP L+V L +A SS + D+S+I
Sbjct:   303 LEDNKFSVPLILSLPSTVISLTKKEPLKVKVSTVLGSKAPALSVKLTQALSSKSVDSSVI 362

Query:   125 ENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGL 184
              NQELKFD   A YFLD  P +FD+G+Y FVFK+++ +S  + VY T   T+VPI  TG 
Sbjct:   363 NNQELKFDADSATYFLDSFPKNFDIGKYTFVFKIVLDESAHEKVYITEAQTKVPIAATGA 422

Query:   185 IKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQ 244
             I IENA+IAVLDSD+GSVE+QKKLDL  +  VS+SANHLQKLRLSFQ++TPLGNAFKPHQ
Sbjct:   423 ISIENAEIAVLDSDIGSVESQKKLDLTKDGAVSLSANHLQKLRLSFQLTTPLGNAFKPHQ 482

Query:   245 AFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLL 304
             AF +L+HE++VEH F+V +SGKK E+ LDFLGLVEK +YLSG+Y+IQLT+GDA MENSLL
Sbjct:   483 AFFKLKHESQVEHIFLVKTSGKKSELVLDFLGLVEKLYYLSGKYEIQLTIGDASMENSLL 542

Query:   305 RDIGYVELDLXXXXXXXXXXXXXXVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVXX 364
              +IG++ELDL               +PY+RYGPKAEI+HIFR PEK P ++LSL FL   
Sbjct:   543 SNIGHIELDLPERPEKATRPPLQSTEPYSRYGPKAEISHIFRIPEKLPAKQLSLVFLGVI 602

Query:   365 XXXXXXXXXXXXXXXVNLKNFPTSAVPATFAVIFHLGIAAVXXXXXXXXXXXXXXXXXXX 424
                            VN+K+FP+S   A  A++FH GI AV                   
Sbjct:   603 VLPFIGFLIGLTRLGVNIKSFPSSTGSAISALLFHCGIGAVLLLYVLFWLKLDLFTTLKA 662

Query:   425 XXXXGVFLMVVGHRT 439
                 GVFL+ VGHRT
Sbjct:   663 LSLLGVFLLFVGHRT 677




GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA
GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISS
GO:0008250 "oligosaccharyltransferase complex" evidence=IEA
GO:0018279 "protein N-linked glycosylation via asparagine" evidence=IEA
GO:0009409 "response to cold" evidence=IEP
GO:0005739 "mitochondrion" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006364 "rRNA processing" evidence=RCA
GO:0030244 "cellulose biosynthetic process" evidence=RCA
UNIPROTKB|P04844 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PBH2 RPN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1PCT7 RPN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZI6 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-7928 rpn2 "ribophorin II" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0034277 OstDelta "Oligosaccharide transferase Delta subunit" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:98085 Rpn2 "ribophorin II" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|D4A8V6 Rpn2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1C8Z0 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q93Z16RPN2_ARATH2, ., 4, ., 9, 9, ., 1, 80.67700.99110.6497yesno
Q5N7W3RPN2_ORYSJ2, ., 4, ., 9, 9, ., 1, 80.61670.98890.6418yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.119LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query453
pfam05817636 pfam05817, Ribophorin_II, Oligosaccharyltransferas 1e-169
>gnl|CDD|218763 pfam05817, Ribophorin_II, Oligosaccharyltransferase subunit Ribophorin II Back     alignment and domain information
 Score =  489 bits (1260), Expect = e-169
 Identities = 173/450 (38%), Positives = 257/450 (57%), Gaps = 19/450 (4%)

Query: 1   MREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVD 60
             + +G L+TT+ VVRG    +  ++    +  ++I+ +A +FL        K+ F  ++
Sbjct: 203 YLQFEGGLSTTALVVRGAYKLADHVSTEPPIKEEQIVKLANYFLSRKSVQSAKDAFSLLE 262

Query: 61  SLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARD 120
           +LA L NN+  +P+++SLP    SL ++  LKVKV  VLG    P +V LV+A  S +  
Sbjct: 263 ALAVLSNNKFHVPVVVSLPGPAASLHEQPVLKVKVTNVLGKPLSPASVKLVQAVKSKSTK 322

Query: 121 NSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIY 180
            +++    L FD    V+ L+ + A    G Y FV ++   + + + +Y T  L    + 
Sbjct: 323 AAVLSKVNLTFDLDGDVFELNFMSAKPASGYYTFVVEV---EGDHRYIYNTVELK---VK 376

Query: 181 VTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQM-STPLGNA 239
           V+G + I+N +++V+D D  SV    K+D   ++ VS+SA+  QK  LSFQ+  TP G  
Sbjct: 377 VSGKVSIDNVELSVVDKDQSSVPKTTKVDYPKKAKVSLSADSHQKFVLSFQLVDTPSGKP 436

Query: 240 FKPHQAFLRLRH-ETKVEHTFVVG-SSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDA 297
             PHQAF+RL + +TK E  FV    S K ++  LD     E F  LSG Y++ L VGDA
Sbjct: 437 LTPHQAFVRLHNQKTKQEIIFVAEPDSSKAYKFELDVGARKEDFGSLSGTYELYLIVGDA 496

Query: 298 VMENSLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELS 357
            +ENS L ++  VEL  PE       P P  V+  + +GPK EI+H+FR PEKRPP  +S
Sbjct: 497 TLENSFLWNVADVELKFPE------EPAPSTVEAKSLFGPKPEISHLFREPEKRPPTVVS 550

Query: 358 LAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLD 417
             F  L +LPL   +I  ++LGVN+ NFP S      A++FHLG+ A+L LY +FWLKL+
Sbjct: 551 NTFTALILLPLLLLLILWMKLGVNISNFPFS----PSAILFHLGLGAILGLYYVFWLKLN 606

Query: 418 LFTTLKTLCFLGVFLMVVGHRTLSHLASAS 447
           +FTTLK L  LGVF  + G+R LS +A   
Sbjct: 607 MFTTLKYLAILGVFTFLAGNRMLSQIAVKR 636


This family contains eukaryotic Ribophorin II (RPN2) proteins. The mammalian oligosaccharyltransferase (OST) is a protein complex that effects the cotranslational N-glycosylation of newly synthesised polypeptides, and is composed of the following proteins: ribophorins I and II (RI and RII), OST48, and Dadl, N33/IAP, OST4, STT3. The family also includes the SWP1 protein from yeast. In yeast the oligosaccharyltransferase complex is composed 7 or 8 subunits, SWP1, being one of them. Length = 636

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 453
PF05817636 Ribophorin_II: Oligosaccharyltransferase subunit R 100.0
KOG2447287 consensus Oligosaccharyltransferase, delta subunit 100.0
>PF05817 Ribophorin_II: Oligosaccharyltransferase subunit Ribophorin II; InterPro: IPR008814 This family consists of several eukaryotic Ribophorin II (RPN2) proteins Back     alignment and domain information
Probab=100.00  E-value=1.2e-113  Score=931.52  Aligned_cols=431  Identities=38%  Similarity=0.631  Sum_probs=408.3

Q ss_pred             CccccCCcchhhhhhhhhhhccccccCCCCCChhHHHHHhhhhhccCCCCChhhHHHHHHHHHhhhcCCeeeceEEEccC
Q 012932            1 MREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPS   80 (453)
Q Consensus         1 ~~~feggls~Ta~~v~g~~~l~~~~~k~~~i~~~q~~~~any~lsr~~v~s~k~a~~~~~al~~l~~n~~~~P~~~~l~~   80 (453)
                      |+||||||++||++|+|+|+||++++|+|+|++||++||||||||||++|++||||++++||++|++|++++|+|+++++
T Consensus       203 ~LqFeggLs~TA~vv~g~~~la~~~~k~~~i~~dQivklanylLsrr~v~s~k~a~~l~~al~~L~~N~~~~Pv~i~l~~  282 (636)
T PF05817_consen  203 YLQFEGGLSTTALVVRGIYKLADAVGKKPPIKEDQIVKLANYLLSRRSVQSPKDAFNLLEALKSLSSNKFHVPVVISLES  282 (636)
T ss_pred             ceeecCCchhhHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhhCCccccEEEEeCC
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeccccCCceEEEEEeccCCCCCCceEEEEEeEeecCCCceEEeccccccCCCCceEEecCCCCCCCceeEEEEEEEee
Q 012932           81 TVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLV  160 (453)
Q Consensus        81 ~~~~~~~~~~l~v~V~~vlg~~~~~~~V~~~~~~~~~~~~~~v~~~~~l~~~~~~~~y~l~~~~~k~~~G~Y~~~~~v~~  160 (453)
                      ++++.+++|.|+|+|+|+||+|+++++|++++++++.++|++++++++|++++++++|++|+++.|+++|+|++++++ .
T Consensus       283 ~~~~~~~~~~l~v~Vt~vlG~~~~~~~v~~~~a~~s~~~~~~vls~~~l~~~~~~~~~~l~~~~~k~~~G~Y~~~~~~-~  361 (636)
T PF05817_consen  283 SASLSSSKPSLKVRVTNVLGQPLPPLSVKLVSAISSSSDDSVVLSNKPLTFDSDKTVYELDLMSLKPARGYYKFSFSV-S  361 (636)
T ss_pred             CcccccCCCcEEEEEEeccCCcCCcchhhhhhhhhccCCcceeeccccceecCCCCeEEEecccCCCCCceEEEEEEe-c
Confidence            999999999999999999999999999999999888888889999999998888889999999999999999999988 2


Q ss_pred             cccccceeeeecceeEEEEEEEEEEEEEeeEEEEeeCCCCccceeeeeecCCCcceeeecCCcceEEEEEEEEc-CCCCC
Q 012932          161 QDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMST-PLGNA  239 (453)
Q Consensus       161 ~d~~~~~~~~~~~~~~~~v~V~~~v~v~~~~~~v~d~d~~~~~~~~~l~~~~k~~~~l~ad~~~~l~l~F~l~~-~~g~~  239 (453)
                          ++.++++ .+.+++|+|+++|+|++++++|.|+|+++.++++++++++++..+|++|++|+++++|+|++ ++|++
T Consensus       362 ----~~~~~~~-~~~~~~vkV~~~v~v~~~~v~v~d~d~~~~~~~~~v~~~~k~~~~l~ad~~~~l~l~f~l~~~~~g~~  436 (636)
T PF05817_consen  362 ----GDKRLIG-NTAQLQVKVLGEVSVENAEVSVADSDQSSAPKKTSVDYPSKLSSSLSADSHQKLKLKFSLTDKSDGKP  436 (636)
T ss_pred             ----Cccceee-eEEEEEEEEEEEEEEeEEEEEeecCCCCcCcceeeecccccccCCccCCCCceEEEEEEEEEcCCCCc
Confidence                2235554 34899999999999999999999999999999999999999999999999999999999965 78999


Q ss_pred             CCceeEEEEEEe-CCceEEEEEec-CCCceEEEEeccccchhhhhccCccEEEEEEEecccccCCcceeeeeEEecCCCC
Q 012932          240 FKPHQAFLRLRH-ETKVEHTFVVG-SSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEP  317 (453)
Q Consensus       240 ~~PhQafl~l~~-~t~~e~~fvvk-~s~k~y~~~ld~~~l~~~f~~~sg~y~v~LivgD~~~~~~~~~~l~~i~L~~~~~  317 (453)
                      ++||||||||+| ++|+|++|+++ +++++|++++|+++++++|.+.||+|+++|||||+.++||+.|++|+++|++++.
T Consensus       437 ~~phQafl~l~~~~t~~e~~f~~~~~~~~~~k~~l~~~~~~~~f~~~sg~y~~~LiiGd~~~~~~~~~~l~~i~l~~~~~  516 (636)
T PF05817_consen  437 KRPHQAFLRLTHQETGLEIIFPAEVDSSGKYKFELDLKDLPKQFLYLSGPYSLSLIIGDASISNPLNWNLGDISLKFPED  516 (636)
T ss_pred             cceeEEEEEEEeCCCCceEEEeeecCCCceEEEEEeccccchhhhhcCCceeEEEEEecCCcCCceeeeeeEEEEecCCc
Confidence            999999999999 99999999985 5667899999999999999999999999999999999999999999999999863


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCceeeeccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCcchhHHH
Q 012932          318 PENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVI  397 (453)
Q Consensus       318 ~~~~~~~p~~~~e~~~ry~pkpEI~H~FR~peK~Pp~~vS~~Ft~lvlapl~~Lli~W~~lG~Nl~n~p~s~~~~~~~i~  397 (453)
                            +++.+++++.||+|||||||+||+||||||++||++|+++|++||++|+++|.++|+|++|+|+++    ++++
T Consensus       517 ------~~~~~~~~~~ry~~kpEI~H~Fr~~eK~pp~~vS~~F~~~vlapl~~Ll~~W~~lG~Nl~~l~~~~----~~~~  586 (636)
T PF05817_consen  517 ------APPPKYEKPVRYGPKPEIHHIFREPEKRPPKIVSLVFTGLVLAPLLVLLILWLKLGANLSNLPFSP----SAIL  586 (636)
T ss_pred             ------CCCCCccccccCCCCCceeeecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHcCcchhhCCCCc----hHHH
Confidence                  122456677999999999999999999999999999999999999999999999999999999998    5999


Q ss_pred             HHHHHHHHHHHHHHHhhccCHHHHHHHHHHhhHhhhhhhhHHHHHHHHHh
Q 012932          398 FHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASAS  447 (453)
Q Consensus       398 F~~sL~gie~lf~~Ywl~l~lF~TL~~l~~Lg~~t~l~G~r~L~~la~~r  447 (453)
                      ||+||+|||++|++||++|||||||+|+++||+|||++|+|+||++++||
T Consensus       587 F~~~l~ai~glf~~Yw~~l~lFqTL~~~~~lg~~t~~~G~r~L~~~a~~r  636 (636)
T PF05817_consen  587 FHGGLGAIEGLFFLYWLGLNLFQTLPYLAVLGAVTFLSGNRALRELAERR  636 (636)
T ss_pred             HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999998



The mammalian oligosaccharyltransferase (OST) is a protein complex that effects the cotranslational N-glycosylation of newly synthesised polypeptides, and is composed of at least four rough ER-specific membrane proteins: ribophorins I and II (RI and RII), OST48, and Dadl. The mechanism(s) by which the subunits of this complex are retained in the ER are not well understood [].; GO: 0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity, 0018279 protein N-linked glycosylation via asparagine, 0005789 endoplasmic reticulum membrane, 0008250 oligosaccharyltransferase complex

>KOG2447 consensus Oligosaccharyltransferase, delta subunit (ribophorin II) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query453
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 54.9 bits (131), Expect = 4e-08
 Identities = 45/285 (15%), Positives = 91/285 (31%), Gaps = 68/285 (23%)

Query: 125 ENQELKFDPQDAVY-FLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTG 183
           E  E ++  +D +  F D    +FD  +   + K ++   E   +  +       + +  
Sbjct: 10  ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69

Query: 184 LIKIENAKIA------VLDSDLG----SVETQKKLDLAGESTVSVSANHLQKLRLSFQMS 233
            +  +  ++       VL  +       ++T+++   +  + + +      +L    Q+ 
Sbjct: 70  TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR-QPSMMTRMYIE--QRDRLYNDNQVF 126

Query: 234 TPLG-NAFKPH----QAFLRLRHETKVEHTFVVG--SSGK-----------KFEITLDFL 275
                +  +P+    QA L LR    V    + G   SGK           K +  +DF 
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNV---LIDGVLGSGKTWVALDVCLSYKVQCKMDF- 182

Query: 276 GLVEKFFYLS-GRYDIQLTVGDAVME--NSLLRDIGYVELDLPEPPENASRPPPQPVDPY 332
               K F+L+    +      + V+E    LL  I        +   N        +   
Sbjct: 183 ----KIFWLNLKNCNSP----ETVLEMLQKLLYQIDPNWTSRSDHSSN----IKLRIHSI 230

Query: 333 TRYGPKAEITHIFRAPEKRPPQELSLAFLVL------TILPLFGF 371
                +AE+  + +   K     L    LVL           F  
Sbjct: 231 -----QAELRRLLK--SKPYENCL----LVLLNVQNAKAWNAFNL 264


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00