Citrus Sinensis ID: 012932
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 453 | ||||||
| 356505035 | 687 | PREDICTED: dolichyl-diphosphooligosaccha | 0.995 | 0.656 | 0.725 | 0.0 | |
| 356572268 | 688 | PREDICTED: dolichyl-diphosphooligosaccha | 0.995 | 0.655 | 0.718 | 0.0 | |
| 449443532 | 679 | PREDICTED: dolichyl-diphosphooligosaccha | 0.969 | 0.646 | 0.725 | 0.0 | |
| 297744165 | 756 | unnamed protein product [Vitis vinifera] | 0.997 | 0.597 | 0.767 | 0.0 | |
| 359480291 | 690 | PREDICTED: dolichyl-diphosphooligosaccha | 0.997 | 0.655 | 0.767 | 0.0 | |
| 224062133 | 694 | predicted protein [Populus trichocarpa] | 0.995 | 0.649 | 0.727 | 0.0 | |
| 255577958 | 699 | ribophorin II, putative [Ricinus communi | 0.991 | 0.642 | 0.718 | 0.0 | |
| 356537059 | 689 | PREDICTED: dolichyl-diphosphooligosaccha | 0.997 | 0.656 | 0.719 | 0.0 | |
| 22328844 | 691 | ribophorin II (RPN2) family protein [Ara | 0.991 | 0.649 | 0.677 | 1e-180 | |
| 297804040 | 693 | ribophorin II family protein [Arabidopsi | 0.991 | 0.647 | 0.674 | 1e-180 |
| >gi|356505035|ref|XP_003521298.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/452 (72%), Positives = 388/452 (85%), Gaps = 1/452 (0%)
Query: 2 REQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDS 61
RE QG L+TTSSVVRG+TAF++V + +NL GDKILG+A FFLGIGIPGD K+FF+QV+S
Sbjct: 237 REHQGSLSTTSSVVRGVTAFAAVTSGKINLPGDKILGLANFFLGIGIPGDAKDFFNQVES 296
Query: 62 LACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDN 121
LA LENN+VSIPL+LSLP+TV SL+KKD LKV+VNTVLGS APPLTV LV+AF S+A+D
Sbjct: 297 LALLENNKVSIPLVLSLPATVYSLSKKDQLKVRVNTVLGSAAPPLTVKLVQAFRSNAKD- 355
Query: 122 SIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYV 181
S IE++EL++D + ++FL+ P + DVG Y+FVF++ + DS + VYATG VPIYV
Sbjct: 356 SAIESKELQYDQNNGIHFLEAFPDNVDVGTYVFVFEIALHDSAGEKVYATGGQIHVPIYV 415
Query: 182 TGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFK 241
TG+IK+ NA+IAVLDSDLGSVETQK LDLAG VS+SANHLQKLR SFQ++TP G+AFK
Sbjct: 416 TGIIKVSNAEIAVLDSDLGSVETQKTLDLAGNDDVSLSANHLQKLRFSFQLTTPHGHAFK 475
Query: 242 PHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMEN 301
PHQAF +L+HETK EH FVVG++G+KFEI LDFLGLVEKF+YLSGRYDI+LTVGD VMEN
Sbjct: 476 PHQAFFKLKHETKHEHIFVVGNTGRKFEIILDFLGLVEKFYYLSGRYDIELTVGDTVMEN 535
Query: 302 SLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFL 361
S LR +G V+LDLPE PE A+R PP PVDPY+RYGPKAEI H+FRAPEKRPPQELSL FL
Sbjct: 536 SFLRLLGEVDLDLPEAPEKAARLPPLPVDPYSRYGPKAEIAHLFRAPEKRPPQELSLTFL 595
Query: 362 VLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTT 421
L +LP GF++GLLRLGVNLKNFP+SAVPAT+A +FHLGIAAVLLLYVLFWLKLDLFTT
Sbjct: 596 GLILLPFIGFLVGLLRLGVNLKNFPSSAVPATYAFLFHLGIAAVLLLYVLFWLKLDLFTT 655
Query: 422 LKTLCFLGVFLMVVGHRTLSHLASASAKLKSA 453
LKT+ FLG FL+ VGHR LSHLAS S+KLKSA
Sbjct: 656 LKTVGFLGAFLLFVGHRILSHLASTSSKLKSA 687
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356572268|ref|XP_003554291.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449443532|ref|XP_004139531.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucumis sativus] gi|449508984|ref|XP_004163460.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297744165|emb|CBI37135.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359480291|ref|XP_002272576.2| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224062133|ref|XP_002300771.1| predicted protein [Populus trichocarpa] gi|222842497|gb|EEE80044.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255577958|ref|XP_002529851.1| ribophorin II, putative [Ricinus communis] gi|223530679|gb|EEF32552.1| ribophorin II, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356537059|ref|XP_003537048.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|22328844|ref|NP_193847.2| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|334186764|ref|NP_001190785.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|75163691|sp|Q93Z16.1|RPN2_ARATH RecName: Full=Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; AltName: Full=Protein HAPLESS 6; AltName: Full=Ribophorin II; Short=RPN-II; AltName: Full=Ribophorin-2; Flags: Precursor gi|16604454|gb|AAL24233.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gi|18958022|gb|AAL79584.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gi|332659008|gb|AEE84408.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|332659010|gb|AEE84410.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297804040|ref|XP_002869904.1| ribophorin II family protein [Arabidopsis lyrata subsp. lyrata] gi|297315740|gb|EFH46163.1| ribophorin II family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 453 | ||||||
| TAIR|locus:2127328 | 691 | HAP6 "HAPLESS 6" [Arabidopsis | 0.960 | 0.629 | 0.581 | 3.1e-131 | |
| UNIPROTKB|P04844 | 631 | RPN2 "Dolichyl-diphosphooligos | 0.728 | 0.522 | 0.268 | 1.7e-20 | |
| UNIPROTKB|F1PBH2 | 562 | RPN2 "Uncharacterized protein" | 0.728 | 0.587 | 0.265 | 4.2e-20 | |
| UNIPROTKB|F1PCT7 | 647 | RPN2 "Uncharacterized protein" | 0.728 | 0.510 | 0.265 | 5.8e-20 | |
| UNIPROTKB|Q3SZI6 | 631 | RPN2 "Dolichyl-diphosphooligos | 0.728 | 0.522 | 0.262 | 4.1e-19 | |
| ZFIN|ZDB-GENE-030131-7928 | 643 | rpn2 "ribophorin II" [Danio re | 0.730 | 0.514 | 0.254 | 7.4e-19 | |
| FB|FBgn0034277 | 634 | OstDelta "Oligosaccharide tran | 0.830 | 0.593 | 0.246 | 1.7e-18 | |
| MGI|MGI:98085 | 631 | Rpn2 "ribophorin II" [Mus musc | 0.728 | 0.522 | 0.262 | 3.7e-18 | |
| UNIPROTKB|D4A8V6 | 612 | Rpn2 "Dolichyl-diphosphooligos | 0.728 | 0.539 | 0.262 | 4.7e-18 | |
| UNIPROTKB|E1C8Z0 | 631 | RPN2 "Dolichyl-diphosphooligos | 0.726 | 0.521 | 0.261 | 5e-18 |
| TAIR|locus:2127328 HAP6 "HAPLESS 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
Identities = 253/435 (58%), Positives = 319/435 (73%)
Query: 5 QGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLAC 64
QGP++TT+SV+RGLT+F++ + LNL GDKI+G+AKFFLG+GIPGD K+FF+Q+D+LAC
Sbjct: 243 QGPISTTASVIRGLTSFAASESTGLNLPGDKIVGLAKFFLGVGIPGDAKDFFNQIDALAC 302
Query: 65 LENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSII 124
LE+N+ S+PLILSLPSTVISLTKK+ LKVKV+TVLGS AP L+V L +A SS + D+S+I
Sbjct: 303 LEDNKFSVPLILSLPSTVISLTKKEPLKVKVSTVLGSKAPALSVKLTQALSSKSVDSSVI 362
Query: 125 ENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGL 184
NQELKFD A YFLD P +FD+G+Y FVFK+++ +S + VY T T+VPI TG
Sbjct: 363 NNQELKFDADSATYFLDSFPKNFDIGKYTFVFKIVLDESAHEKVYITEAQTKVPIAATGA 422
Query: 185 IKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQ 244
I IENA+IAVLDSD+GSVE+QKKLDL + VS+SANHLQKLRLSFQ++TPLGNAFKPHQ
Sbjct: 423 ISIENAEIAVLDSDIGSVESQKKLDLTKDGAVSLSANHLQKLRLSFQLTTPLGNAFKPHQ 482
Query: 245 AFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLL 304
AF +L+HE++VEH F+V +SGKK E+ LDFLGLVEK +YLSG+Y+IQLT+GDA MENSLL
Sbjct: 483 AFFKLKHESQVEHIFLVKTSGKKSELVLDFLGLVEKLYYLSGKYEIQLTIGDASMENSLL 542
Query: 305 RDIGYVELDLXXXXXXXXXXXXXXVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVXX 364
+IG++ELDL +PY+RYGPKAEI+HIFR PEK P ++LSL FL
Sbjct: 543 SNIGHIELDLPERPEKATRPPLQSTEPYSRYGPKAEISHIFRIPEKLPAKQLSLVFLGVI 602
Query: 365 XXXXXXXXXXXXXXXVNLKNFPTSAVPATFAVIFHLGIAAVXXXXXXXXXXXXXXXXXXX 424
VN+K+FP+S A A++FH GI AV
Sbjct: 603 VLPFIGFLIGLTRLGVNIKSFPSSTGSAISALLFHCGIGAVLLLYVLFWLKLDLFTTLKA 662
Query: 425 XXXXGVFLMVVGHRT 439
GVFL+ VGHRT
Sbjct: 663 LSLLGVFLLFVGHRT 677
|
|
| UNIPROTKB|P04844 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PBH2 RPN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PCT7 RPN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q3SZI6 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-7928 rpn2 "ribophorin II" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0034277 OstDelta "Oligosaccharide transferase Delta subunit" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:98085 Rpn2 "ribophorin II" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|D4A8V6 Rpn2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C8Z0 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 453 | |||
| pfam05817 | 636 | pfam05817, Ribophorin_II, Oligosaccharyltransferas | 1e-169 |
| >gnl|CDD|218763 pfam05817, Ribophorin_II, Oligosaccharyltransferase subunit Ribophorin II | Back alignment and domain information |
|---|
Score = 489 bits (1260), Expect = e-169
Identities = 173/450 (38%), Positives = 257/450 (57%), Gaps = 19/450 (4%)
Query: 1 MREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVD 60
+ +G L+TT+ VVRG + ++ + ++I+ +A +FL K+ F ++
Sbjct: 203 YLQFEGGLSTTALVVRGAYKLADHVSTEPPIKEEQIVKLANYFLSRKSVQSAKDAFSLLE 262
Query: 61 SLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARD 120
+LA L NN+ +P+++SLP SL ++ LKVKV VLG P +V LV+A S +
Sbjct: 263 ALAVLSNNKFHVPVVVSLPGPAASLHEQPVLKVKVTNVLGKPLSPASVKLVQAVKSKSTK 322
Query: 121 NSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIY 180
+++ L FD V+ L+ + A G Y FV ++ + + + +Y T L +
Sbjct: 323 AAVLSKVNLTFDLDGDVFELNFMSAKPASGYYTFVVEV---EGDHRYIYNTVELK---VK 376
Query: 181 VTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQM-STPLGNA 239
V+G + I+N +++V+D D SV K+D ++ VS+SA+ QK LSFQ+ TP G
Sbjct: 377 VSGKVSIDNVELSVVDKDQSSVPKTTKVDYPKKAKVSLSADSHQKFVLSFQLVDTPSGKP 436
Query: 240 FKPHQAFLRLRH-ETKVEHTFVVG-SSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDA 297
PHQAF+RL + +TK E FV S K ++ LD E F LSG Y++ L VGDA
Sbjct: 437 LTPHQAFVRLHNQKTKQEIIFVAEPDSSKAYKFELDVGARKEDFGSLSGTYELYLIVGDA 496
Query: 298 VMENSLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELS 357
+ENS L ++ VEL PE P P V+ + +GPK EI+H+FR PEKRPP +S
Sbjct: 497 TLENSFLWNVADVELKFPE------EPAPSTVEAKSLFGPKPEISHLFREPEKRPPTVVS 550
Query: 358 LAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLD 417
F L +LPL +I ++LGVN+ NFP S A++FHLG+ A+L LY +FWLKL+
Sbjct: 551 NTFTALILLPLLLLLILWMKLGVNISNFPFS----PSAILFHLGLGAILGLYYVFWLKLN 606
Query: 418 LFTTLKTLCFLGVFLMVVGHRTLSHLASAS 447
+FTTLK L LGVF + G+R LS +A
Sbjct: 607 MFTTLKYLAILGVFTFLAGNRMLSQIAVKR 636
|
This family contains eukaryotic Ribophorin II (RPN2) proteins. The mammalian oligosaccharyltransferase (OST) is a protein complex that effects the cotranslational N-glycosylation of newly synthesised polypeptides, and is composed of the following proteins: ribophorins I and II (RI and RII), OST48, and Dadl, N33/IAP, OST4, STT3. The family also includes the SWP1 protein from yeast. In yeast the oligosaccharyltransferase complex is composed 7 or 8 subunits, SWP1, being one of them. Length = 636 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 453 | |||
| PF05817 | 636 | Ribophorin_II: Oligosaccharyltransferase subunit R | 100.0 | |
| KOG2447 | 287 | consensus Oligosaccharyltransferase, delta subunit | 100.0 |
| >PF05817 Ribophorin_II: Oligosaccharyltransferase subunit Ribophorin II; InterPro: IPR008814 This family consists of several eukaryotic Ribophorin II (RPN2) proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-113 Score=931.52 Aligned_cols=431 Identities=38% Similarity=0.631 Sum_probs=408.3
Q ss_pred CccccCCcchhhhhhhhhhhccccccCCCCCChhHHHHHhhhhhccCCCCChhhHHHHHHHHHhhhcCCeeeceEEEccC
Q 012932 1 MREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPS 80 (453)
Q Consensus 1 ~~~feggls~Ta~~v~g~~~l~~~~~k~~~i~~~q~~~~any~lsr~~v~s~k~a~~~~~al~~l~~n~~~~P~~~~l~~ 80 (453)
|+||||||++||++|+|+|+||++++|+|+|++||++||||||||||++|++||||++++||++|++|++++|+|+++++
T Consensus 203 ~LqFeggLs~TA~vv~g~~~la~~~~k~~~i~~dQivklanylLsrr~v~s~k~a~~l~~al~~L~~N~~~~Pv~i~l~~ 282 (636)
T PF05817_consen 203 YLQFEGGLSTTALVVRGIYKLADAVGKKPPIKEDQIVKLANYLLSRRSVQSPKDAFNLLEALKSLSSNKFHVPVVISLES 282 (636)
T ss_pred ceeecCCchhhHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhhCCccccEEEEeCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeccccCCceEEEEEeccCCCCCCceEEEEEeEeecCCCceEEeccccccCCCCceEEecCCCCCCCceeEEEEEEEee
Q 012932 81 TVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLV 160 (453)
Q Consensus 81 ~~~~~~~~~~l~v~V~~vlg~~~~~~~V~~~~~~~~~~~~~~v~~~~~l~~~~~~~~y~l~~~~~k~~~G~Y~~~~~v~~ 160 (453)
++++.+++|.|+|+|+|+||+|+++++|++++++++.++|++++++++|++++++++|++|+++.|+++|+|++++++ .
T Consensus 283 ~~~~~~~~~~l~v~Vt~vlG~~~~~~~v~~~~a~~s~~~~~~vls~~~l~~~~~~~~~~l~~~~~k~~~G~Y~~~~~~-~ 361 (636)
T PF05817_consen 283 SASLSSSKPSLKVRVTNVLGQPLPPLSVKLVSAISSSSDDSVVLSNKPLTFDSDKTVYELDLMSLKPARGYYKFSFSV-S 361 (636)
T ss_pred CcccccCCCcEEEEEEeccCCcCCcchhhhhhhhhccCCcceeeccccceecCCCCeEEEecccCCCCCceEEEEEEe-c
Confidence 999999999999999999999999999999999888888889999999998888889999999999999999999988 2
Q ss_pred cccccceeeeecceeEEEEEEEEEEEEEeeEEEEeeCCCCccceeeeeecCCCcceeeecCCcceEEEEEEEEc-CCCCC
Q 012932 161 QDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMST-PLGNA 239 (453)
Q Consensus 161 ~d~~~~~~~~~~~~~~~~v~V~~~v~v~~~~~~v~d~d~~~~~~~~~l~~~~k~~~~l~ad~~~~l~l~F~l~~-~~g~~ 239 (453)
++.++++ .+.+++|+|+++|+|++++++|.|+|+++.++++++++++++..+|++|++|+++++|+|++ ++|++
T Consensus 362 ----~~~~~~~-~~~~~~vkV~~~v~v~~~~v~v~d~d~~~~~~~~~v~~~~k~~~~l~ad~~~~l~l~f~l~~~~~g~~ 436 (636)
T PF05817_consen 362 ----GDKRLIG-NTAQLQVKVLGEVSVENAEVSVADSDQSSAPKKTSVDYPSKLSSSLSADSHQKLKLKFSLTDKSDGKP 436 (636)
T ss_pred ----Cccceee-eEEEEEEEEEEEEEEeEEEEEeecCCCCcCcceeeecccccccCCccCCCCceEEEEEEEEEcCCCCc
Confidence 2235554 34899999999999999999999999999999999999999999999999999999999965 78999
Q ss_pred CCceeEEEEEEe-CCceEEEEEec-CCCceEEEEeccccchhhhhccCccEEEEEEEecccccCCcceeeeeEEecCCCC
Q 012932 240 FKPHQAFLRLRH-ETKVEHTFVVG-SSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEP 317 (453)
Q Consensus 240 ~~PhQafl~l~~-~t~~e~~fvvk-~s~k~y~~~ld~~~l~~~f~~~sg~y~v~LivgD~~~~~~~~~~l~~i~L~~~~~ 317 (453)
++||||||||+| ++|+|++|+++ +++++|++++|+++++++|.+.||+|+++|||||+.++||+.|++|+++|++++.
T Consensus 437 ~~phQafl~l~~~~t~~e~~f~~~~~~~~~~k~~l~~~~~~~~f~~~sg~y~~~LiiGd~~~~~~~~~~l~~i~l~~~~~ 516 (636)
T PF05817_consen 437 KRPHQAFLRLTHQETGLEIIFPAEVDSSGKYKFELDLKDLPKQFLYLSGPYSLSLIIGDASISNPLNWNLGDISLKFPED 516 (636)
T ss_pred cceeEEEEEEEeCCCCceEEEeeecCCCceEEEEEeccccchhhhhcCCceeEEEEEecCCcCCceeeeeeEEEEecCCc
Confidence 999999999999 99999999985 5667899999999999999999999999999999999999999999999999863
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCceeeeccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCcchhHHH
Q 012932 318 PENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVI 397 (453)
Q Consensus 318 ~~~~~~~p~~~~e~~~ry~pkpEI~H~FR~peK~Pp~~vS~~Ft~lvlapl~~Lli~W~~lG~Nl~n~p~s~~~~~~~i~ 397 (453)
+++.+++++.||+|||||||+||+||||||++||++|+++|++||++|+++|.++|+|++|+|+++ ++++
T Consensus 517 ------~~~~~~~~~~ry~~kpEI~H~Fr~~eK~pp~~vS~~F~~~vlapl~~Ll~~W~~lG~Nl~~l~~~~----~~~~ 586 (636)
T PF05817_consen 517 ------APPPKYEKPVRYGPKPEIHHIFREPEKRPPKIVSLVFTGLVLAPLLVLLILWLKLGANLSNLPFSP----SAIL 586 (636)
T ss_pred ------CCCCCccccccCCCCCceeeecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHcCcchhhCCCCc----hHHH
Confidence 122456677999999999999999999999999999999999999999999999999999999998 5999
Q ss_pred HHHHHHHHHHHHHHHhhccCHHHHHHHHHHhhHhhhhhhhHHHHHHHHHh
Q 012932 398 FHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASAS 447 (453)
Q Consensus 398 F~~sL~gie~lf~~Ywl~l~lF~TL~~l~~Lg~~t~l~G~r~L~~la~~r 447 (453)
||+||+|||++|++||++|||||||+|+++||+|||++|+|+||++++||
T Consensus 587 F~~~l~ai~glf~~Yw~~l~lFqTL~~~~~lg~~t~~~G~r~L~~~a~~r 636 (636)
T PF05817_consen 587 FHGGLGAIEGLFFLYWLGLNLFQTLPYLAVLGAVTFLSGNRALRELAERR 636 (636)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999998
|
The mammalian oligosaccharyltransferase (OST) is a protein complex that effects the cotranslational N-glycosylation of newly synthesised polypeptides, and is composed of at least four rough ER-specific membrane proteins: ribophorins I and II (RI and RII), OST48, and Dadl. The mechanism(s) by which the subunits of this complex are retained in the ER are not well understood [].; GO: 0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity, 0018279 protein N-linked glycosylation via asparagine, 0005789 endoplasmic reticulum membrane, 0008250 oligosaccharyltransferase complex |
| >KOG2447 consensus Oligosaccharyltransferase, delta subunit (ribophorin II) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 453 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 4e-08
Identities = 45/285 (15%), Positives = 91/285 (31%), Gaps = 68/285 (23%)
Query: 125 ENQELKFDPQDAVY-FLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTG 183
E E ++ +D + F D +FD + + K ++ E + + + +
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69
Query: 184 LIKIENAKIA------VLDSDLG----SVETQKKLDLAGESTVSVSANHLQKLRLSFQMS 233
+ + ++ VL + ++T+++ + + + + +L Q+
Sbjct: 70 TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR-QPSMMTRMYIE--QRDRLYNDNQVF 126
Query: 234 TPLG-NAFKPH----QAFLRLRHETKVEHTFVVG--SSGK-----------KFEITLDFL 275
+ +P+ QA L LR V + G SGK K + +DF
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNV---LIDGVLGSGKTWVALDVCLSYKVQCKMDF- 182
Query: 276 GLVEKFFYLS-GRYDIQLTVGDAVME--NSLLRDIGYVELDLPEPPENASRPPPQPVDPY 332
K F+L+ + + V+E LL I + N +
Sbjct: 183 ----KIFWLNLKNCNSP----ETVLEMLQKLLYQIDPNWTSRSDHSSN----IKLRIHSI 230
Query: 333 TRYGPKAEITHIFRAPEKRPPQELSLAFLVL------TILPLFGF 371
+AE+ + + K L LVL F
Sbjct: 231 -----QAELRRLLK--SKPYENCL----LVLLNVQNAKAWNAFNL 264
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00