Citrus Sinensis ID: 013024

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-
Protein Sequence
MATLSAAWMYQDRGLGPVDYSDDFITRKPNFNRFQTSFLGSFPTGILQTRLRLNNLLRRTSSVRRIKCEKNDELPEYVSVERPPYYSYFDSASGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGESTGSPSYGKHPGSRRKKYKTSVRARSSEVTVESSASLEPEVSEDATEDPKESSSEYVVYETESKAEGETEYELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNWRKSDKEQWSRWQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQERLERIGPIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVISREELEEILTKEKTEEVEAGHSSKQ
Secondary Structure (PSIPRED)
cccccccEEEccccccccccccccccccccccccccccccccccccEEEEEEccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccEEEccccccccccHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHccHHHHHHHHcccEEEEcccccccccHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccEcccHHccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccEEEEEcccccccccccccccccccEccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccEEEEcccccHcccccHHHHHHccccccccccccccccccccccHHHHHHcccccccHHHHHHHccccHHHHHHHHHHHcccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHccccEEEcccccHccccHHHHHHHHccccccccEEEcccccHEEcccccccccccHHHHHHHHHcccEEcHHHHHHHHHHHcHHHHHHHccccc
Coil and Loop (DISEMBL)
MATLSAAWMyqdrglgpvdysddfitrkpnfnrfqtsflgsfptgILQTRLRLNNLLRRTSSvrrikcekndelpeyvsverppyysyfdsasgqlepasgarasipgeeywpegtaSRVRaarapeptgestgspsygkhpgsrrkkyktsvrarssevtvessaslepevsedatedpkessseyvvyeteskaegeteyeldkklgrphpfidpkvrkpieeplsseeLWWNWRKSDKEQWSrwqrrrpdVETVFLKAMAETGqiklygehptltETALYRARRHLFKEERLKAEQERLERIGPIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIMmgndirikrdpLAMRLREDQIkqiwggdpvyptvnyiqdpdevidyrgpdfheptpnMLDYLKEHGKVISREELEEILTKekteeveaghsskq
Flexible Loop (DISEMBL)
MATLSAAwmyqdrglgpVDYSDDFITRKPNFNRFQTSFLGSFPTGILQTRLRLNNLlrrtssvrrikcekndelpeyvsverpPYYSYFDSASGQLEPASGARASIPGEEYWPEGTASRVRAArapeptgestgspsygkhpgsrrkkyktsvrarssevtvessaslepevsedatedpkessseyvvyeteskaegeteyeldkklgrphpfidpkvrkpieeplsseelwwnwrksdkeqwsrwqrrrpDVETVFLKAMAetgqiklygehptlTETALYRARRHLFKEERLKAeqerlerigpiayysewVKAWKRDTSREAIQKHYeetgedentqLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIkqiwggdpvyPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVISREELEEiltkekteeveaghsskq
Low Complexity Region (SEG)
MATLSAAWMYQDRGLGPVDYSDDFITRKPNFNRFQTSFLGSFPTGILQtrlrlnnllrrtssvrrIKCEKNDELPEYVSVERPPYYSYFDSASGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGESTGSPSYGKHPGSRRKKYKTSVRARSSEVTVESSASLEPEVSEDATEDPKessseyvvyetesKAEGETEYELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNWRKSDKEQWSRWQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQERLERIGPIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVISReeleeiltkekteeveAGHSSKQ
Disordered region (IsUnstruct)
*****AAWMYQDRGLGPVDYSDDFITRKPNFNRFQTSFLGSFPTGILQTRLRLNNLLRRTSSVRRIKCEKNDELPEYVSVERPPYYSYF*********************************************************************************************************************************************ELWWNWRKSDKEQWSRWQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQERLERIGPIAYYSEWVKAWKRDT*****************TQLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHE***NMLDYLK*******************************
Disordered Region (DISOPRED)
*****AA*MYQDRGLGPVDYSDDFITRKPNFNRFQTSFLGSFPTGILQTRLRLNNLLRRTSSVRRI*C***********VERPPYYSYFD*******************EYWPEGTA******************************************************************************************************************LWWNWR***************DVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHL******************IAYYSEWVKAWKRDT**************DENTQLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVISREELE*******************
Disordered Region (DISEMBL)
MATLSAAWMYQDRGLGPVDYSDDFITRKPNFNRFQTSFLGSFPTGILQTRLRLNNLLRRTSSVRRIKCEKNDELPEYVSVERPPYYSYFDSASGQLEPASGARASIPGEEYWPE***************************************************************************************YELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNWRKS**********RRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQERLERIGPIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVISREELEEILTKE*************
Disordered Region (DISPRO)
****SA***YQDRGLGPVDYSDDFITRKPNFNRFQTSFLGSFPTGILQTRLRLNNLLRRTSSVRRIKCEKNDELPEYVSVERPPYYSYFDSASGQ*E*****RASIPGEE*WPEGTASRVR****************************************************************EYV**ETESK*EGETEYELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNWRKSDKEQWSRWQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQERLERIGPIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVISREELEEILTKEKTE**********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATLSAAWMYQDRGLGPVDYSDDFITRKPNFNRFQTSFLGSFPTGILQTRLRLNNLLRRTSSVRRIKCEKNDELPEYVSVERPPYYSYFDSASGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGESTGSPSYGKHPGSRRKKYKTSVRARSSEVTVESSASLEPEVSEDATEDPKESSSEYVVYETESKAEGETEYELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNWRKSDKEQWSRWQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQERLERIGPIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVISREELEEILTKEKTEEVEAGHSSKQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	451
359483911	512	PREDICTED: uncharacterized protein LOC10	0.940	0.828	0.785	0.0
255580451	524	conserved hypothetical protein [Ricinus	0.955	0.822	0.710	0.0
449433599	527	PREDICTED: uncharacterized protein LOC10	0.984	0.842	0.716	0.0
365222882	528	Hop-interacting protein THI030 [Solanum	0.982	0.839	0.713	0.0
449529937	502	PREDICTED: uncharacterized LOC101217173	0.911	0.818	0.744	1e-178
224056401	493	predicted protein [Populus trichocarpa]	0.891	0.815	0.733	1e-176
357447195	540	hypothetical protein MTR_2g018740 [Medic	0.911	0.761	0.721	1e-173
356549130	519	PREDICTED: uncharacterized protein LOC10	0.913	0.793	0.721	1e-165
30686151	527	plastid transcriptionally active 12 [Ara	0.949	0.812	0.635	1e-155
297826929	527	PTAC12 [Arabidopsis lyrata subsp. lyrata	0.951	0.814	0.623	1e-155

>gi|359483911|ref|XP_002272288.2| PREDICTED: uncharacterized protein LOC100251522 [Vitis vinifera] gi|297740769|emb|CBI30951.3| unnamed protein product [Vitis vinifera]

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/425 (78%), Positives = 373/425 (87%), Gaps = 1/425 (0%)

Query: 21  SDDFITRKPNFNRFQTSFLGSFPTGILQTRLRLNNLLRRTSSVRRIKCEKNDELPEYVSV 80
           +D F+  K +F+ FQTSF+GSFP GILQ RL +N   RR      IKCEK D   E +SV
Sbjct: 4   TDGFVVGKSSFHHFQTSFIGSFPAGILQVRLGVNGTQRRVPLFPCIKCEKKDGFFEQISV 63

Query: 81  ERPPYYSYFDSASGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGESTGSPSYGK 140
           ERPPY SYFDS SGQLEPASGARASIP EEYWPEGTA RVRAARAPEPTG+S G+PS+GK
Sbjct: 64  ERPPYDSYFDSTSGQLEPASGARASIPSEEYWPEGTAGRVRAARAPEPTGKSAGAPSFGK 123

Query: 141 HPGSRRKKYKTSVRA-RSSEVTVESSASLEPEVSEDATEDPKESSSEYVVYETESKAEGE 199
            PGSRRKK+KTSV A  SSE++V+ S  + PE S+D  E+PK+ SSEYVVYET+   E  
Sbjct: 124 RPGSRRKKHKTSVAAPESSEISVDLSEQVAPENSDDMMEEPKDVSSEYVVYETKPDEEET 183

Query: 200 TEYELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNWRKSDKEQWSRWQRRRPDVETVFL 259
            EY+LDKKLGRPHPFIDP+ +KP+ EPL+SEELWWNWRK DKEQWSRWQRRRPDVETVFL
Sbjct: 184 REYDLDKKLGRPHPFIDPEAKKPLGEPLTSEELWWNWRKPDKEQWSRWQRRRPDVETVFL 243

Query: 260 KAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQERLERIGPIAYYSEWVKAWK 319
           KAMAETGQ+KLYGEHPTLTET+LYRARRHLFK+ERL+AEQERLE+IGP+AYYSEWV+AWK
Sbjct: 244 KAMAETGQVKLYGEHPTLTETSLYRARRHLFKDERLQAEQERLEKIGPMAYYSEWVEAWK 303

Query: 320 RDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIK 379
           RDTSREA+QKH+EETGEDENTQLIEMF HQTDREYRIMMG DIRI+RDPLAMR+REDQIK
Sbjct: 304 RDTSREAVQKHFEETGEDENTQLIEMFQHQTDREYRIMMGTDIRIQRDPLAMRMREDQIK 363

Query: 380 QIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVISREELEEILTKEK 439
           QIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNML +LKEHGK+ISREELE+IL KEK
Sbjct: 364 QIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLAFLKEHGKIISREELEKILAKEK 423

Query: 440 TEEVE 444
           TEE+E
Sbjct: 424 TEELE 428

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580451|ref|XP_002531051.1| conserved hypothetical protein [Ricinus communis] gi|223529346|gb|EEF31312.1| conserved hypothetical protein [Ricinus communis]

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/445 (71%), Positives = 367/445 (82%), Gaps = 14/445 (3%)

Query: 1   MATLSAAWMYQDRGLGPVDYSDDFITRKPNFNRFQTSFLGSFPTGILQTRLRLNNLLRRT 60
           MA+ S  W+YQDR          F++ KP  N  QT F+GSF  GILQ +     LL+  
Sbjct: 4   MASFSGTWIYQDR----------FVSGKPGLNHLQTQFVGSFSAGILQVKFGSKPLLK-A 52

Query: 61  SSVRRIKCEKNDELPEYVSVERPPYYSYFDSASGQLEPASGARASIPGEEYWPEGTASRV 120
             +  IKCEK D+  E+VSVERPPY+SY D  SG+LEPASGARASIPGEEYWPEGTA RV
Sbjct: 53  PLLPSIKCEKKDDYIEHVSVERPPYHSYMDPTSGRLEPASGARASIPGEEYWPEGTADRV 112

Query: 121 RAARAPEPTGESTGSPSYGKHPGSRRKKYKTSVRA-RSSEVTVESSASLEPEVSEDATED 179
           RAARAPEPTG STGSPSYG+ PGSRRK Y+ S  A  +S +++E+    EPE+ ++ TE+
Sbjct: 113 RAARAPEPTGTSTGSPSYGERPGSRRKMYRASAVAPDTSTLSIETQE--EPEIVDETTEE 170

Query: 180 PKESSSEYVVYETESKAEGETEYELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNWRKS 239
           PK+  S+YVV++ ES+ E +  Y +DKKLGRPHPFIDPKV+KPIE  L+SEE WWNWRK 
Sbjct: 171 PKDVLSDYVVFQAESEEEPQDGYGIDKKLGRPHPFIDPKVKKPIEGTLTSEESWWNWRKP 230

Query: 240 DKEQWSRWQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQ 299
           +KEQWSRWQRR+PDVETVFLKAMAETGQ+KLYGE PTLTE ALYRAR+HLFKEERL+ EQ
Sbjct: 231 EKEQWSRWQRRKPDVETVFLKAMAETGQVKLYGETPTLTECALYRARKHLFKEERLRTEQ 290

Query: 300 ERLERIGPIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIMMG 359
           ERLERIGP+AYYSEWVKAWKRDTSREAIQKH+EETGEDEN QLIEMF +QTDREYRIMMG
Sbjct: 291 ERLERIGPMAYYSEWVKAWKRDTSREAIQKHFEETGEDENAQLIEMFSYQTDREYRIMMG 350

Query: 360 NDIRIKRDPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYL 419
            DIRI+RDPLAMR+RED IKQIWGGDPVYPT+NYIQDP+EVIDYRGPDFHEPTPNML +L
Sbjct: 351 TDIRIRRDPLAMRMREDLIKQIWGGDPVYPTINYIQDPNEVIDYRGPDFHEPTPNMLAFL 410

Query: 420 KEHGKVISREELEEILTKEKTEEVE 444
           KEHGK++ RE+ E+IL KEKTE++E
Sbjct: 411 KEHGKIVPREDFEKILAKEKTEQLE 435

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433599|ref|XP_004134585.1| PREDICTED: uncharacterized protein LOC101217173 [Cucumis sativus]

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/448 (71%), Positives = 372/448 (83%), Gaps = 4/448 (0%)

Query: 1   MATLSAAWMYQDRGLGPVDYSDDFITRKPNFNRFQTSFLGSFPTGILQTRLRLNNLLRRT 60
           MA+LS   +Y DRG   V Y++  +  KP  N  +T F+GSFP  +L     LN   +R 
Sbjct: 1   MASLSTPCLYPDRGRNGVFYANGCVGGKPLSNFLKTPFIGSFPVRLLLVGNALNKSPQRN 60

Query: 61  SSVRRIKCEKNDELPEYVSVERPPYYSYFDSASGQLEPASGARASIPGEEYWPEGTASRV 120
             V  I+CE  DE  E V+VERPPY++Y DS SGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIRCENRDESYEDVTVERPPYHTYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 121 RAARAPEPTGESTGSPSYGKHPGSRRKKYKTSVRAR--SSEVT-VESSASLEPEVSEDAT 177
           RAARAPEPTG S GSPSYG++PGSRRKK +T   A   SSEVT V+SS  +  E+SED  
Sbjct: 121 RAARAPEPTGTSMGSPSYGQNPGSRRKKNRTLAAAAHDSSEVTEVDSSDLVISEISEDFI 180

Query: 178 EDPKESSSEYVVYETESKAEGETEYELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNWR 237
           E+PK+ +S+YVVY+TE   E  T ++LDKK G PHPFIDPK +KPIEEP +SEELWWNWR
Sbjct: 181 EEPKDDTSQYVVYQTEPDEEV-TGFDLDKKTGNPHPFIDPKKKKPIEEPRTSEELWWNWR 239

Query: 238 KSDKEQWSRWQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKA 297
           K +KEQWSRWQRR+PDVETVFLKAMA+TGQIKLYGE PTLTE +LYRARRHL+KEERL+A
Sbjct: 240 KPEKEQWSRWQRRKPDVETVFLKAMAQTGQIKLYGEQPTLTEVSLYRARRHLYKEERLQA 299

Query: 298 EQERLERIGPIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIM 357
           EQERLERIGPIA+YSEWVK WKRDTS++AI+KH+EETGEDENTQ+IEMF +QT+RE+RIM
Sbjct: 300 EQERLERIGPIAFYSEWVKDWKRDTSKDAIRKHFEETGEDENTQMIEMFQNQTEREFRIM 359

Query: 358 MGNDIRIKRDPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLD 417
           MG DIRI+RDPLAMR+REDQIKQIWGGDPVYPTVNYIQDP+E+IDYRGPDFHEPTP MLD
Sbjct: 360 MGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPGMLD 419

Query: 418 YLKEHGKVISREELEEILTKEKTEEVEA 445
           +LKEHGK+ISREEL+EIL KEK EE+E 
Sbjct: 420 FLKEHGKIISREELQEILAKEKNEELEV 447

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|365222882|gb|AEW69793.1| Hop-interacting protein THI030 [Solanum lycopersicum]

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/450 (71%), Positives = 368/450 (81%), Gaps = 7/450 (1%)

Query: 1   MATLSAAWMYQDRGLGPVDYSDDFITRKPNFNRFQTSFLGSFPTGILQTRLRLNNLLRRT 60
           MA++ +  +YQDRGL  V  +D F+       R +T F G+ P  I + +   ++  ++ 
Sbjct: 1   MASVLSTSLYQDRGLRIVASTDGFVPTICCPYR-KTLFTGTTPVSIWKLKFVSSSPFQKA 59

Query: 61  SSVRRIKCE---KNDELPEYVSVERPPYYSYFDSASGQLEPASGARASIPGEEYWPEGTA 117
                IKCE   KN    E VSVER PY+SY DS SGQLEPASGARASIPG+EYWPEGTA
Sbjct: 60  PLAPCIKCENKEKNQGSFEQVSVERFPYHSYMDSTSGQLEPASGARASIPGKEYWPEGTA 119

Query: 118 SRVRAARAPEPTGESTGSPSYGKHPGSRRKKYKTSVRA-RSSEVTVESSASLEPEVSEDA 176
           SRV+AARAPEP G STG+PSYGK PGSRRKKYKTS  + + SE+ V S   LE    +  
Sbjct: 120 SRVQAARAPEPDGISTGTPSYGKAPGSRRKKYKTSASSSQPSEINVISDDPLE--TPDSV 177

Query: 177 TEDPKESSSEYVVYETESKAEGETEYELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNW 236
            E+PK+ SSEYV+Y+ E   E  T YELDK+ GRPHPFIDPKV+K IE+PL+SEELWWNW
Sbjct: 178 PEEPKDLSSEYVIYQPEQDEEELTGYELDKRHGRPHPFIDPKVKKEIEKPLTSEELWWNW 237

Query: 237 RKSDKEQWSRWQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLK 296
           RK +KEQWSRWQRRRPDVETVFLKAMAETGQ+KLYGEHPTLTETALYRARRHL+KEERL+
Sbjct: 238 RKPEKEQWSRWQRRRPDVETVFLKAMAETGQVKLYGEHPTLTETALYRARRHLYKEERLQ 297

Query: 297 AEQERLERIGPIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRI 356
           AE+E++E+IGPIAYYSEWVKAWKRDTSR+AIQKH+EETGEDENTQLIEMF HQTDREYRI
Sbjct: 298 AEKEKMEKIGPIAYYSEWVKAWKRDTSRDAIQKHFEETGEDENTQLIEMFSHQTDREYRI 357

Query: 357 MMGNDIRIKRDPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNML 416
           MMG D+RI RDPLAMR+REDQIKQIWGGDPVYPT+NYIQDPDEVID+RGPDFHEPTPNML
Sbjct: 358 MMGTDMRIPRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPDEVIDFRGPDFHEPTPNML 417

Query: 417 DYLKEHGKVISREELEEILTKEKTEEVEAG 446
            YLKEHGK+ISREELE+IL KEKTEE+E  
Sbjct: 418 AYLKEHGKIISREELEKILAKEKTEEIEVA 447

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449529937|ref|XP_004171954.1| PREDICTED: uncharacterized LOC101217173 [Cucumis sativus]

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 309/415 (74%), Positives = 354/415 (85%), Gaps = 4/415 (0%)

Query: 34  FQTSFLGSFPTGILQTRLRLNNLLRRTSSVRRIKCEKNDELPEYVSVERPPYYSYFDSAS 93
            QT F+GSFP  +L     LN   +R   V  I+CE  DE  E V+VERPPY++Y DS S
Sbjct: 9   IQTPFIGSFPVRLLLVGNALNKSPQRNQLVPCIRCENRDESYEDVTVERPPYHTYMDSTS 68

Query: 94  GQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGESTGSPSYGKHPGSRRKKYKTSV 153
           GQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTG S GSPSYG++PGSRRKK +T  
Sbjct: 69  GQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGTSMGSPSYGQNPGSRRKKNRTLA 128

Query: 154 RAR--SSEVT-VESSASLEPEVSEDATEDPKESSSEYVVYETESKAEGETEYELDKKLGR 210
            A   SSEVT V+SS  +  E+SED  E+PK+ +S+YVVY+TE   E  T ++LDKK G 
Sbjct: 129 AAAHDSSEVTEVDSSDLVISEISEDFIEEPKDDTSQYVVYQTEPDEEV-TGFDLDKKTGN 187

Query: 211 PHPFIDPKVRKPIEEPLSSEELWWNWRKSDKEQWSRWQRRRPDVETVFLKAMAETGQIKL 270
           PHPFIDPK +KPIEEP +SEELWWNWRK +KEQWSRWQRR+PDVETVFLKAMA+TGQIKL
Sbjct: 188 PHPFIDPKKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMAQTGQIKL 247

Query: 271 YGEHPTLTETALYRARRHLFKEERLKAEQERLERIGPIAYYSEWVKAWKRDTSREAIQKH 330
           YGE PTLTE +LYRARRHL+KEERL+AEQERLERIGPIA+YSEWVK WKRDTS++AI+KH
Sbjct: 248 YGEQPTLTEVSLYRARRHLYKEERLQAEQERLERIGPIAFYSEWVKDWKRDTSKDAIRKH 307

Query: 331 YEETGEDENTQLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIKQIWGGDPVYPT 390
           +EETGEDENTQ+IEMF +QT+RE+RIMMG DIRI+RDPLAMR+REDQIKQIWGGDPVYPT
Sbjct: 308 FEETGEDENTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT 367

Query: 391 VNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVISREELEEILTKEKTEEVEA 445
           VNYIQDP+E+IDYRGPDFHEPTP MLD+LKEHGK+ISREEL+EIL KEK EE+E 
Sbjct: 368 VNYIQDPNEIIDYRGPDFHEPTPGMLDFLKEHGKIISREELQEILAKEKNEELEV 422

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056401|ref|XP_002298838.1| predicted protein [Populus trichocarpa] gi|222846096|gb|EEE83643.1| predicted protein [Populus trichocarpa]

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 308/420 (73%), Positives = 349/420 (83%), Gaps = 18/420 (4%)

Query: 34  FQTSFLGSFPTGILQTRLRLNNLLRRTSSVRRIKCEKNDELPEYVSVERPPYYSYFDSAS 93
            QT F+GSFP G L+        +R+  S+  IKCEK DE  E+V VE PPY+SY DS S
Sbjct: 1   MQTPFIGSFPAGTLE--------VRKAPSLPCIKCEKKDENVEHVYVELPPYHSYMDSTS 52

Query: 94  GQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGESTGSPSYGKHPGSRRKKYKTSV 153
           GQLEPASGARASIP +EYWPEGTA RVRAARAPEPTG S GSPSYGK PGSRRKKYK SV
Sbjct: 53  GQLEPASGARASIPDQEYWPEGTADRVRAARAPEPTGLSAGSPSYGKKPGSRRKKYKASV 112

Query: 154 RA-RSSEVTVESSASLEPEVSEDATEDPKESSSEYVVYETESKAEGETEYELDKKLGRPH 212
            A  SSE ++E   S   E  E+  E+PK+ SS+YV+Y+TE + E +T YELDKKLGRPH
Sbjct: 113 AAPESSEASIEFIDSEALESYEEMKEEPKDDSSDYVIYDTEPEEE-DTGYELDKKLGRPH 171

Query: 213 PFIDPKVRKPIEEPLSSEELWWNWRKSDKEQWSRWQRRRPDVETV--------FLKAMAE 264
           PFIDPKV+KPIE  L  EELWWNWR  + EQWSRWQRR+PDVETV        FLKAMAE
Sbjct: 172 PFIDPKVKKPIEGILPQEELWWNWRNPENEQWSRWQRRKPDVETVSMPIIEKVFLKAMAE 231

Query: 265 TGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQERLERIGPIAYYSEWVKAWKRDTSR 324
           TGQ+KLYG+ PTLTE +LYRAR+HL+KEERL+AEQ+RLERIGP+ YYSEWVKAWKRDTSR
Sbjct: 232 TGQVKLYGKEPTLTEASLYRARKHLYKEERLEAEQKRLERIGPMGYYSEWVKAWKRDTSR 291

Query: 325 EAIQKHYEETGEDENTQLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIKQIWGG 384
           EAIQKH+EETGEDEN QLI MFCHQTDRE+RIMMG D+RI+RDPLAMR+RED IKQIWGG
Sbjct: 292 EAIQKHFEETGEDENAQLIAMFCHQTDREFRIMMGTDVRIRRDPLAMRMREDLIKQIWGG 351

Query: 385 DPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVISREELEEILTKEKTEEVE 444
           DPVYPTVNYIQDP+E+IDYRGPDFHEPTPNMLDYLKEHGK+ISR+ELE+IL KEKTE++E
Sbjct: 352 DPVYPTVNYIQDPNEIIDYRGPDFHEPTPNMLDYLKEHGKIISRKELEKILAKEKTEQLE 411

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357447195|ref|XP_003593873.1| hypothetical protein MTR_2g018740 [Medicago truncatula] gi|355482921|gb|AES64124.1| hypothetical protein MTR_2g018740 [Medicago truncatula]

 Score =  613 bits (1580), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 311/431 (72%), Positives = 352/431 (81%), Gaps = 20/431 (4%)

Query: 30  NFNRFQTS--FLGSFPTGILQTRLRLNNLLRRTSSVRRIKCEKNDELP----------EY 77
           +FN FQTS   +G    G L  R+      ++  S   I+CEKNDE+           +Y
Sbjct: 13  SFNHFQTSTYLVG---VGNLPCRVGFRKSRKKLPSYSCIRCEKNDEIKKDEENKDEVIDY 69

Query: 78  VSVERPPYYSYFDSASGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGESTGSPS 137
           V+VERPPYYSY DS SGQLEPASGARASIP  EYWPEGT  +VRAARAP P GES GSPS
Sbjct: 70  VTVERPPYYSYMDSTSGQLEPASGARASIPEVEYWPEGTVEQVRAARAPTPMGESLGSPS 129

Query: 138 YGKHPGSRRKKYKTSVRARSSEVTVESSASLE----PEVSEDATEDPKESSSEYVVYETE 193
           YG +PGSRRK Y+TSV   SSE  VE +  L+    PEV  +  ED +E +S+YVVY++E
Sbjct: 130 YGSNPGSRRKSYRTSVSGSSSEGNVEGNVELDDPGLPEVLVEPQEDSEEFTSDYVVYQSE 189

Query: 194 SKAEGETEYELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNWRKSDKEQWSRWQRRRPD 253
            + E ETEY+LDKK G PHPFIDPK++KPIE  L+SEELWWNWRK +KEQWSRWQRRRPD
Sbjct: 190 PEEE-ETEYKLDKKFGAPHPFIDPKIKKPIEGTLTSEELWWNWRKPEKEQWSRWQRRRPD 248

Query: 254 VETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQERLERIGPIAYYSE 313
            ETVFLKAMAETGQ+KLYGE PTLTETALYRARRHL+KEERL+AEQE+LERIGPIAYYSE
Sbjct: 249 TETVFLKAMAETGQVKLYGEEPTLTETALYRARRHLYKEERLEAEQEKLERIGPIAYYSE 308

Query: 314 WVKAWKRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRL 373
           WVKAWKRDTS EAIQKH+EETGEDE TQLIEMF +QTDREYR+MMG D+RI+RDPLAMR+
Sbjct: 309 WVKAWKRDTSHEAIQKHFEETGEDETTQLIEMFSNQTDREYRVMMGTDVRIRRDPLAMRM 368

Query: 374 REDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVISREELEE 433
           REDQIKQIWGGDPVYPTVNYIQDPDEVIDYRG DFHEPTPNML +LKEHGK+ISREELE+
Sbjct: 369 REDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGADFHEPTPNMLPFLKEHGKIISREELEK 428

Query: 434 ILTKEKTEEVE 444
           IL K+KTE+VE
Sbjct: 429 ILEKQKTEQVE 439

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549130|ref|XP_003542950.1| PREDICTED: uncharacterized protein LOC100798194 [Glycine max]

 Score =  586 bits (1510), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 308/427 (72%), Positives = 355/427 (83%), Gaps = 15/427 (3%)

Query: 30  NFNRFQT---SFLGSFPTGILQTRLRLNNLLRRTSSVRRIKCEKNDELPEY---VSVERP 83
           +FN FQT   S+L     GI+Q  + L N  R+   +  IKCEK D+  E+   VSVERP
Sbjct: 13  SFNHFQTPPSSYL--VGAGIVQRGVSLRNCRRKVPCI--IKCEKKDDEVEHIQNVSVERP 68

Query: 84  PYYSYFDSASGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGESTGSPSYGKHPG 143
           PYYSY DS SGQLEPASGARASIPG+EYWPEGTASRVRAARAP PT ES+ SPSYG  PG
Sbjct: 69  PYYSYLDSTSGQLEPASGARASIPGQEYWPEGTASRVRAARAPAPTAESSTSPSYGTKPG 128

Query: 144 SRRKKYKTSV--RARSSEVTVESSASLEP---EVSEDATEDPKESSSEYVVYETESKAEG 198
           SRRK YKT+V   A SS+  VES+ +      EV  ++ E+ ++  S++VVY++E + E 
Sbjct: 129 SRRKNYKTTVPAAAASSQPIVESNGTGSGGSSEVLIESLEESQDDVSDFVVYQSEPEEEE 188

Query: 199 ETEYELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNWRKSDKEQWSRWQRRRPDVETVF 258
            +EYE DKKLG PHPFIDPKV KPIE  LS++ELWWNWR+ +KEQWSRWQRR+PDVETVF
Sbjct: 189 LSEYEFDKKLGLPHPFIDPKVNKPIEGTLSNDELWWNWRQPEKEQWSRWQRRKPDVETVF 248

Query: 259 LKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQERLERIGPIAYYSEWVKAW 318
           L AMAETGQIKL+GEHPTLTETALYRARR ++KEERL+AEQERLER GPIAYYSEWVKAW
Sbjct: 249 LNAMAETGQIKLHGEHPTLTETALYRARREIYKEERLQAEQERLERDGPIAYYSEWVKAW 308

Query: 319 KRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQI 378
           KRDTSREAIQKH+EETGEDE TQLIEMFCHQTDREYRIMMG D+RI+RDPLAMR+REDQI
Sbjct: 309 KRDTSREAIQKHFEETGEDETTQLIEMFCHQTDREYRIMMGTDVRIQRDPLAMRMREDQI 368

Query: 379 KQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVISREELEEILTKE 438
           KQIWGGDPVYPTVNYIQDP+EVIDYRGPDFHEPTPNM+ YLKE GK+ISREE ++I+ KE
Sbjct: 369 KQIWGGDPVYPTVNYIQDPNEVIDYRGPDFHEPTPNMVSYLKEKGKLISREEFDKIMAKE 428

Query: 439 KTEEVEA 445
           KTE++E+
Sbjct: 429 KTEQIES 435

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30686151|ref|NP_181011.2| plastid transcriptionally active 12 [Arabidopsis thaliana] gi|330253908|gb|AEC09002.1| plastid transcriptionally active 12 [Arabidopsis thaliana]

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 293/461 (63%), Positives = 344/461 (74%), Gaps = 33/461 (7%)

Query: 1   MATLSAA-WMYQDRGLGPVDYSDDFITRKPNFNRFQTSF-LGSFPTGILQTRLRLNNLLR 58
           MA++S   W+Y+ +       S + I ++    R +  F L +   GI            
Sbjct: 1   MASISTTTWLYRGQVCTDSGKSSNCIVQR----RVKCGFPLKTLHAGITS---------- 46

Query: 59  RTSSVRR-IKCEKND-------------ELPEYVSVERPPYYSYFDSASGQLEPASGARA 104
           R  S+R  IKC+K D             E  EYV+VER PY+SY DS SG+LEPASGARA
Sbjct: 47  RDRSLRHCIKCKKEDGDGDVSEGSKKSEEGFEYVTVERHPYHSYMDSTSGKLEPASGARA 106

Query: 105 SIPGEEYWPEGTASRVRAARAPEPTGESTGSPSYGKHPGSRRKKYKTSVRARSSEVTVES 164
           SIPGE+YWPEGT+SRVRAARAP+P GES+  PSYGK+PGSRRKK +   +A    VTVE+
Sbjct: 107 SIPGEDYWPEGTSSRVRAARAPQPAGESSSFPSYGKNPGSRRKKNR---KATEENVTVET 163

Query: 165 SASLEPEVSEDATEDPKESSSEYVVYETESKAEGETEYELDKKLGRPHPFIDPKVRKPIE 224
           +  +         E+   S           + E ET +ELDKKLGRPHPFIDP  +K IE
Sbjct: 164 NDEVSDSEDSSEEEENDSSDGFVTYKNEFEREEEETGFELDKKLGRPHPFIDPTKKKQIE 223

Query: 225 EPLSSEELWWNWRKSDKEQWSRWQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYR 284
           + L+S+E WWNWRK +KEQWSRWQRRRPDVETVFLKAMAETGQ+KLYGE PTLTET+LYR
Sbjct: 224 KTLTSDESWWNWRKPEKEQWSRWQRRRPDVETVFLKAMAETGQVKLYGEEPTLTETSLYR 283

Query: 285 ARRHLFKEERLKAEQERLERIGPIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIE 344
           ARRHLFKEERL+AE+ERL + GP+A+YSEWVKAWKRDTSREA+QKH+EETGEDENTQLIE
Sbjct: 284 ARRHLFKEERLQAERERLAKEGPMAFYSEWVKAWKRDTSREAVQKHFEETGEDENTQLIE 343

Query: 345 MFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYR 404
           MF HQTDREYRIMMG DIRIKRDPLAMR+REDQIKQIWGGDPVYPT+NYIQDP+ V+D+R
Sbjct: 344 MFSHQTDREYRIMMGTDIRIKRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNAVMDFR 403

Query: 405 GPDFHEPTPNMLDYLKEHGKVISREELEEILTKEKTEEVEA 445
           GPDFHEPTPNML YLKE+GKVISRE  E +LTKEKTE++E 
Sbjct: 404 GPDFHEPTPNMLSYLKENGKVISREMHEALLTKEKTEQLEV 444

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826929|ref|XP_002881347.1| PTAC12 [Arabidopsis lyrata subsp. lyrata] gi|297327186|gb|EFH57606.1| PTAC12 [Arabidopsis lyrata subsp. lyrata]

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 287/460 (62%), Positives = 342/460 (74%), Gaps = 31/460 (6%)

Query: 1   MATLSAA-WMYQDRGLGPVDYSDDFITRKPNFNRFQTSF-LGSFPTGILQTRLRLNNLLR 58
           MA++S   W+Y+ +    +  S + + ++    R +  F + +   GI      L +   
Sbjct: 1   MASISTTTWLYRGKVGTEIGKSSNCLVQR----RVKCGFPIKTLHVGITSGDRSLRHC-- 54

Query: 59  RTSSVRRIKCEKND-------------ELPEYVSVERPPYYSYFDSASGQLEPASGARAS 105
                  IKC+K D             E  +YV+VERPPYYSY DS SG+LEPASGARAS
Sbjct: 55  -------IKCKKGDGDGDASEGTRKSEEGFDYVTVERPPYYSYMDSTSGKLEPASGARAS 107

Query: 106 IPGEEYWPEGTASRVRAARAPEPTGESTGSPSYGKHPGSRRKKYKTSVRARSSEVTVESS 165
           IPGE+YWPEGT+SRVRAARAP+P GES+  PSYGK+PGSRRKK +   +A    VTVE++
Sbjct: 108 IPGEDYWPEGTSSRVRAARAPQPAGESSSFPSYGKNPGSRRKKNR---QATEENVTVETN 164

Query: 166 ASLEPEVSEDATEDPKESSSEYVVYETESKAEGETEYELDKKLGRPHPFIDPKVRKPIEE 225
             +         E+   S           + E E+ +ELDKKLGRPHPFIDP  +K IE+
Sbjct: 165 DEVLDSEDSSEEEENDSSDGFVTYNNEFEREEEESGFELDKKLGRPHPFIDPTKKKQIEK 224

Query: 226 PLSSEELWWNWRKSDKEQWSRWQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRA 285
            L+ +E WWNWRK +KEQWSRWQRRRPDVETVFLKAMAETGQ+KLYGE PTLTET+LYRA
Sbjct: 225 TLTGDESWWNWRKPEKEQWSRWQRRRPDVETVFLKAMAETGQVKLYGEEPTLTETSLYRA 284

Query: 286 RRHLFKEERLKAEQERLERIGPIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIEM 345
           RRHLFKEERL+AE+ERL + GP+A+YSEWVKAWKRD SREA+QKH+EETGEDENTQLIEM
Sbjct: 285 RRHLFKEERLQAERERLAKEGPMAFYSEWVKAWKRDMSREAVQKHFEETGEDENTQLIEM 344

Query: 346 FCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRG 405
           F HQTDREYRIMMG DIRIKRDPLAMR+REDQIKQIWGGDPVYPT+NYIQDP+ V+D+RG
Sbjct: 345 FSHQTDREYRIMMGTDIRIKRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNAVMDFRG 404

Query: 406 PDFHEPTPNMLDYLKEHGKVISREELEEILTKEKTEEVEA 445
           PDFHEPTPNML YLKE+GKVISRE  E +LTKEKTE++E 
Sbjct: 405 PDFHEPTPNMLSYLKENGKVISREMHEALLTKEKTEQLEV 444

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	451
TAIR|locus:2062286	527	PTAC12 "AT2G34640" [Arabidopsi	0.787	0.673	0.734	7.3e-146

TAIR|locus:2062286 PTAC12 "AT2G34640" [Arabidopsis thaliana (taxid:3702)]

 Score = 1425 (506.7 bits), Expect = 7.3e-146, P = 7.3e-146
 Identities = 266/362 (73%), Positives = 308/362 (85%)

Query:    69 EKNDELPEYVSVERPPYYSYFDSASGQLEPASGARASIPGEEYWPEGTASRVRAARAPEP 128
             +K++E  EYV+VER PY+SY DS SG+LEPASGARASIPGE+YWPEGT+SRVRAARAP+P
Sbjct:    71 KKSEEGFEYVTVERHPYHSYMDSTSGKLEPASGARASIPGEDYWPEGTSSRVRAARAPQP 130

Query:   129 TGESTGSPSYGKHPGSRRKKYKTSVRARSSEVTVESSASLEPEVSEDATEDPKXXXXXXX 188
              GES+  PSYGK+PGSRRKK +   +A    VTVE++  +    SED++E+ +       
Sbjct:   131 AGESSSFPSYGKNPGSRRKKNR---KATEENVTVETNDEVSD--SEDSSEEEENDSSDGF 185

Query:   189 XXXXXX--KAEGETEYELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNWRKSDKEQWSR 246
                     + E ET +ELDKKLGRPHPFIDP  +K IE+ L+S+E WWNWRK +KEQWSR
Sbjct:   186 VTYKNEFEREEEETGFELDKKLGRPHPFIDPTKKKQIEKTLTSDESWWNWRKPEKEQWSR 245

Query:   247 WQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQERLERIG 306
             WQRRRPDVETVFLKAMAETGQ+KLYGE PTLTET+LYRARRHLFKEERL+AE+ERL + G
Sbjct:   246 WQRRRPDVETVFLKAMAETGQVKLYGEEPTLTETSLYRARRHLFKEERLQAERERLAKEG 305

Query:   307 PIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIMMGNDIRIKR 366
             P+A+YSEWVKAWKRDTSREA+QKH+EETGEDENTQLIEMF HQTDREYRIMMG DIRIKR
Sbjct:   306 PMAFYSEWVKAWKRDTSREAVQKHFEETGEDENTQLIEMFSHQTDREYRIMMGTDIRIKR 365

Query:   367 DPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVI 426
             DPLAMR+REDQIKQIWGGDPVYPT+NYIQDP+ V+D+RGPDFHEPTPNML YLKE+GKVI
Sbjct:   366 DPLAMRMREDQIKQIWGGDPVYPTINYIQDPNAVMDFRGPDFHEPTPNMLSYLKENGKVI 425

Query:   427 SR 428
             SR
Sbjct:   426 SR 427


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.132   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      451       405    0.0010  117 3  11 23  0.47    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  292 KB (2149 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  41.00u 0.11s 41.11t   Elapsed:  00:00:02
  Total cpu time:  41.00u 0.11s 41.11t   Elapsed:  00:00:02
  Start:  Mon May 20 19:01:00 2013   End:  Mon May 20 19:01:02 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009507 "chloroplast" evidence=IDA

GO:0009295 "nucleoid" evidence=IDA

GO:0009508 "plastid chromosome" evidence=IDA

GO:0042793 "transcription from plastid promoter" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0008283 "cell proliferation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	451
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 1e-05
 Identities = 30/304 (9%), Positives = 90/304 (29%), Gaps = 71/304 (23%)

Query: 168 LEPEVSEDATEDPKESSSEYVVYET-ESKAEGETEYELDKKLGRPHPFIDPKVRKPIEEP 226
           L  E  +         S    ++ T  SK E   +  +++ L   + F+   ++    +P
Sbjct: 46  LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP 105

Query: 227 LSSEELWWNWRK---SDKEQWSRWQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALY 283
                ++   R    +D + ++++   R               +++           AL 
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL----------KLR----------QALL 145

Query: 284 RARRHLF----------KEERLKAE---QERLERIGPIAYYSEWVKAWKRDTSREAIQKH 330
             R              K   +  +     +++       +  W+     ++    ++  
Sbjct: 146 ELRPAKNVLIDGVLGSGKTW-VALDVCLSYKVQCKMDFKIF--WLNLKNCNSPETVLEM- 201

Query: 331 YEETGEDENTQLIEMFCHQTDREYRIMMGNDIRIKRDPLAMRLREDQIKQIWGGDPVYPT 390
                       ++   +Q D  +     +   IK    +++    +++++      Y  
Sbjct: 202 ------------LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ---AELRRLLK-SKPYEN 245

Query: 391 ----VNYIQDPDEVIDYRGPDFHEPT------PNMLDYLK-EHGKVISREELEEILTKEK 439
               +  +Q+  +  +    +             + D+L       IS +     LT ++
Sbjct: 246 CLLVLLNVQNA-KAWNAF--NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302

Query: 440 TEEV 443
            + +
Sbjct: 303 VKSL 306

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 5e-05
 Identities = 67/535 (12%), Positives = 144/535 (26%), Gaps = 162/535 (30%)

Query: 10  YQDRGLGPVDYSDDFITRKPNFNRFQTSFLGSFPTGILQTRLRLNNLLRRTSSVRRIK-- 67
           YQ + +  V + D F+      + F    +   P  IL     +++++    +V      
Sbjct: 16  YQYKDILSV-FEDAFV------DNFDCKDVQDMPKSILSKE-EIDHIIMSKDAVSGTLRL 67

Query: 68  ----CEKNDELPEYVSVERPPYYSYFDSASGQLEPASGARASIPGEEY-WPEGTASRVRA 122
                 K +E+             + +     L              Y +     S ++ 
Sbjct: 68  FWTLLSKQEEM----------VQKFVEEV---LRI-----------NYKF---LMSPIKT 100

Query: 123 -ARAPEPTGES---------TGSPSYGKHPGSRRKKYKTSVRA----RSSE-VTVESSA- 166
             R P                 +  + K+  SR + Y    +A    R ++ V ++    
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG 160

Query: 167 ----SLEPEVSEDATEDPKESSSEYVVY----ETESKAEGETE------YELDKKL-GRP 211
                +  +V         +   ++ ++    +  +  E   E      Y++D     R 
Sbjct: 161 SGKTWVALDVCLS---YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217

Query: 212 HPFIDPKVRK-PIEEPLSSEELWWNWRKS--------DKEQW------------SRWQRR 250
               + K+R   I+  L        +           + + W            +R    
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR---- 273

Query: 251 RPDVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLF------KEERLKAEQERLER 304
               +     + A T  I L     TLT   +    + L       + + L  E   +  
Sbjct: 274 --FKQVTDFLSAATTTHISLDHHSMTLTPDEV----KSLLLKYLDCRPQDLPRE---VLT 324

Query: 305 IGPI------AYYSEWVKAWKR------DTSREAI------------QKHYEETG---ED 337
             P           + +  W        D     I            +K ++        
Sbjct: 325 TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS 384

Query: 338 EN--TQLIEMF-CHQTDREYRIMMGNDIR---IKRDPLAMRLREDQIKQIWGGDPVYPTV 391
            +  T L+ +        +  +++    +   +++ P    +    I      +      
Sbjct: 385 AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYL----ELKVKLE 440

Query: 392 NYIQDPDEVID-YRGP---DFHEPTPNMLD-----YLKEHGKVISREELEEILTK 437
           N       ++D Y  P   D  +  P  LD     ++  H K I   E   +   
Sbjct: 441 NEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRM 495

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 8e-04
 Identities = 50/343 (14%), Positives = 101/343 (29%), Gaps = 98/343 (28%)

Query: 150 KTSVRARSSEVTVESSASLEPEVSEDATEDPKESSSEYVVYETE---SKAEGETEYELDK 206
           K  +  R  +VT   SA+    +S D               E +    K       +L  
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD------EVKSLLLKYLDCRPQDL-- 318

Query: 207 KLGRPH--PFIDPKVRKPIEEPLSSE-ELWWNWRKSDKEQWSR----------------- 246
               P      +P+    I E +      W NW+  + ++ +                  
Sbjct: 319 ----PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM 374

Query: 247 ---------------------WQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRA 285
                                W         V +  + +   ++   +  T++   +   
Sbjct: 375 FDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS---IP-- 429

Query: 286 RRHLFKEERLKAEQER-LERIGPIAYYSEWVKAWKRDTSREAIQK--------HYEETGE 336
              ++ E ++K E E  L R   + +Y+        D     + +        H +    
Sbjct: 430 --SIYLELKVKLENEYALHRS-IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH 486

Query: 337 DENTQLIEM-FCHQTDREYRIMMGNDIRIKRDPLAMRLRE---DQIKQIWGGDPVYPTVN 392
            E   L  M F    D  +R +   + +I+ D  A        + ++Q+      Y    
Sbjct: 487 PERMTLFRMVF---LD--FRFL---EQKIRHDSTAWNASGSILNTLQQL----KFYK--P 532

Query: 393 YIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVISREELEEIL 435
           YI D D       P +      +LD+L +  + +   +  ++L
Sbjct: 533 YICDND-------PKYERLVNAILDFLPKIEENLICSKYTDLL 568

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00