Citrus Sinensis ID: 013065

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450
Protein Sequence
MCEKMQLVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQDHEDIGVNRGICTCGQQSGIVLTVGYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASPVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISDAVALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEGSTWLTAKREGHHVILDGEQILRHIDQLENRFPQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSIDRKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTGQESQEESPAERRYLHVYSTAYLVISYSAAPSE
Secondary Structure (PSIPRED)
cHHHHHHHHHHcccccEEEEEcccEEcccccccccccEEEccccccccccccccccccccEEEEEccccccEEEEEEccccccccccccccHHHHHcccccccccHHHHHHccccccccccccccEEEEEEccccccHHHHHHHHccccccccEEEEccccccccccccccccccccccccccEEEEEEcccccccccccccEEEEEEEccccccccccEEEEEEEEcccccccEEEcccccccccccHHHHHHcccHHHcccccccEEEEEEccccccccccccEEEEEEEEEccccccccEEEEEEcccccccEEEEEcccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEEEEccccccccccccccHHHHHHHcccccEEcccccccccccccccccccccccccccccEEEEEEEEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHcccccEEEEEccccEccccccccccEEEccccccccccccccccccccEEEEEEEEccccEEEEEEEEccccccccccccccHHHcccccccHHHHHHHHHHHHHcccccccccEEEEEEcccccccHHHHHcccccccccEEEEcccccccEcccccccccccccccccccEEEEEEEccccccccccccEEEEEEEEcccccccccEEEEEEEEEcccccEEEEEccccccccccHHHHHHHccHHHHHHccccEEEEEEEccEEccccccccHHHHEEEEccccccccEEEEEccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccEEEEEEEHcccccccccccccccHHHHHHcccccEEEEEEccccccccEcccccccccccccccEEEEEEEEEEEEEEccccccc
Coil and Loop (DISEMBL)
MCEKMQLvkhlglrtpiILSVVHGVMGRDALTDEFRevkfqdhedigvnrgictcgqqsgivltvgylpglkvdaipllrrkeivqvpvddtyvdvylappvpmidQFVMDIQNyttsvsgcaspvgiimfgkedmdqkpiIEKLDYAMSMNTVFvgdersrfayrsgddlrnvcgnpafISDAVALVFasdkdkphagtgeIQFHLAMSegvsaigprhkaVSVRAnhaegstwltakreghhvilDGEQILRHIDQLENRFPQVELYVGVTkrrkcsigsekSRLITTLAFhgirggdqeylyvdgvgiktgdyfqfyqpDHNAALAACRNASENirnlklnssgkgflgrrdvansidrkeVLGGFIFsccgrgnsffgglnvdsfpffenfpsaplagifcggeigrgklsmtgqesqeespaerrYLHVYSTAYLVISYSAAPSE
Flexible Loop (DISEMBL)
MCEKMQLVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQDHEDIGVNRGICTCGQQSGIVLTVGYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASPVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISDAVALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEGSTWLTAKREGHHVILDGEQILRHIDQLenrfpqvelyvgvtkrrkcsigseksrlITTLafhgirggdQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRnlklnssgkgflgrrDVANSIDRKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTGQESQEESPAERRYLHVYSTAYLVISYSAAPSE
Low Complexity Region (SEG)
MCEKMQLVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQDHEDIGVNRGICTCGQQSGIVLTVGYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASPVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISDAVALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEGSTWLTAKREGHHVILDGEQILRHIDQLENRFPQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSIDRKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTGQESQEESPAERRYLHVYSTAYLVISYSAAPSE
Disordered region (IsUnstruct)
******LVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQDHEDIGVNRGICTCGQQSGIVLTVGYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASPVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISDAVALVFASDK*****GTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEGSTWLTAKREGHHVILDGEQILRHIDQLENRFPQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSIDRKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGR******************RYLHVYSTAYLVISY******
Disordered Region (DISOPRED)
****MQLVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQDHEDIGVNRGICTCGQQSGIVLTVGYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASPVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSR**********NVCGNPAFISDAVALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEGSTWLTAKREGHHVILDGEQIL**********PQVELYVGVTK***********RLITTLAFHGIRGGDQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSG***************KEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTG******SPAERRYLHVYSTAYLVI*YS*****
Disordered Region (DISEMBL)
MCEKMQLVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQDHEDIGVNRGICTCGQQSGIVLTVGYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASPVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISDAVALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEGSTWLTAKREGHHVILDGEQILRHIDQLENRFPQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSIDRKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKL*************ERRYLHVYSTAYLVISYSAAPSE
Disordered Region (DISPRO)
MCEKMQLVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQDHEDIGVNRGICTCGQQSGIVLTVGYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASPVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISDAVALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEGSTWLTAKREGHHVILDGEQILRHIDQLENRFPQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSIDRKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTGQESQEESPAERRYLHVYSTAYLVISYSA****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCEKMQLVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQDHEDIGVNRGICTCGQQSGIVLTVGYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASPVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISDAVALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEGSTWLTAKREGHHVILDGEQILRHIDQLENRFPQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSIDRKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTGQESQEESPAERRYLHVYSTAYLVISYSAAPSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	450	2.2.26 [Sep-21-2011]
Q9FMV0	529	F-box/LRR-repeat protein	yes	no	0.9	0.765	0.413	2e-82

>sp|Q9FMV0|FBL91_ARATH F-box/LRR-repeat protein At5g63520 OS=Arabidopsis thaliana GN=At5g63520 PE=2 SV=1

 Score =  306 bits (784), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 188/455 (41%), Positives = 260/455 (57%), Gaps = 50/455 (10%)

Query: 1   MCEKMQLV-KHLGLRTPIILSVVHGVMGRDALTDEFREVKFQ---DHEDIGVNRGICTCG 56
           M E + L+ + +G R PII+SVV G++G++A  D+  EV+     D E   V        
Sbjct: 116 MEETLTLITERVGSRVPIIVSVVTGILGKEACNDKAGEVRLHSTSDDELFDV-------- 167

Query: 57  QQSGIVLTVGYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYT 116
               I+LT+GYLPG+KVD IP+++ K                     M D+FVMDI+NY 
Sbjct: 168 ANFAILLTIGYLPGMKVDIIPVIQAKG---------------ESGAEMEDKFVMDIRNYM 212

Query: 117 TSVSG-CASPVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVC 175
           + VSG  A+P  +I+F ++    +P++ KLDYAM   TV VG +   F ++ G++ RNV 
Sbjct: 213 SMVSGHAAAPACLILFAEDTHATEPVLHKLDYAMPAETVIVGGQIGEFLHKRGNEPRNVQ 272

Query: 176 GNPAFISDAVALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEG--S 233
                I     L+FA D+ +P A    IQF  A+S G+S++  R+KA +V  +      S
Sbjct: 273 LQKDDIRVLAGLIFARDRHRP-AQAERIQFDTAISNGMSSVDLRYKAANVNVSLGPSCPS 331

Query: 234 TWLTAKREGHHVILDGEQILRHIDQ-LENRFPQVELYVGVTKRRKCSIG-SEKSRLITTL 291
           T LTAKR G   +LDG+QIL  ID  LEN   + + Y+GV KRRK SIG  EK +++++L
Sbjct: 332 TLLTAKRRGEAEVLDGDQILDDIDNILENYIWENDSYLGVIKRRKYSIGLEEKPKIMSSL 391

Query: 292 AFHGIRGGDQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFL 351
            FH + G D + L VDG GIKTGD FQ Y PD   A AA  + S  +RNLK         
Sbjct: 392 VFHQVNGSDDQDLLVDGAGIKTGDQFQVYLPDLKVAEAALNDVSAQLRNLK--------- 442

Query: 352 GRRDVANSIDRKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGR 411
                 +  ++ EV+GGF F    RG+SFFG  N DS PF ENFP  P  GIFC GEIGR
Sbjct: 443 ------SKPNKPEVVGGFAFVGSCRGDSFFGCPNADSSPFLENFPELPFGGIFCDGEIGR 496

Query: 412 GKLSMTGQESQEESPAERRYLHVYSTAYLVISYSA 446
             +   G+E +E S   +R+LHVYS+ YL++SY++
Sbjct: 497 SLILEEGEEKKEVSI--QRFLHVYSSVYLIVSYTS 529

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	450
224136205	533	f-box family protein [Populus trichocarp	0.928	0.784	0.542	1e-130
359491092	527	PREDICTED: F-box/LRR-repeat protein At5g	0.94	0.802	0.537	1e-128
147863571	527	hypothetical protein VITISV_019403 [Viti	0.94	0.802	0.535	1e-126
255540189	523	conserved hypothetical protein [Ricinus	0.904	0.778	0.531	1e-124
224122060	551	predicted protein [Populus trichocarpa]	0.928	0.758	0.512	1e-120
118488987	533	unknown [Populus trichocarpa x Populus d	0.926	0.782	0.512	1e-114
224118086	530	predicted protein [Populus trichocarpa]	0.926	0.786	0.515	1e-114
224115878	558	predicted protein [Populus trichocarpa]	0.913	0.736	0.486	1e-107
118484799	342	unknown [Populus trichocarpa]	0.744	0.979	0.573	1e-103
356516535	540	PREDICTED: F-box/LRR-repeat protein At5g	0.913	0.761	0.476	1e-102

>gi|224136205|ref|XP_002322271.1| f-box family protein [Populus trichocarpa] gi|222869267|gb|EEF06398.1| f-box family protein [Populus trichocarpa]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 241/444 (54%), Positives = 314/444 (70%), Gaps = 26/444 (5%)

Query: 7   LVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQDHEDIGVNRGICTCGQQSGIVLTVG 66
           L   LG +TPII+S   G+MGRDA+TDE REV  +++   G +         +GI+LTVG
Sbjct: 111 LATKLGFQTPIIVSCTSGIMGRDAVTDEHREVMLEEYWVDGESNPC------NGIILTVG 164

Query: 67  YLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASPV 126
           +LPGLKVDAIPL + ++  +                 M+D FVMDI++Y TS+SGCASPV
Sbjct: 165 FLPGLKVDAIPLFQPRKGCRAT---------------MVDNFVMDIKDYATSISGCASPV 209

Query: 127 GIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISDAVA 186
           GIIMFG ED DQKP++EKLD+AMS +T+ +GDER++F YR+G + RN   +  + S AVA
Sbjct: 210 GIIMFGDEDADQKPVMEKLDHAMSSDTIIIGDERAQFLYRNGVESRNDYESSEYFSAAVA 269

Query: 187 LVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVR--ANHAEGSTWLTAKREGHH 244
           LVFA D+DKP  GTGEIQFH A+S GVSA+GPR+KAVSV+   +    +TWLTA+REG H
Sbjct: 270 LVFARDRDKP-CGTGEIQFHAALSSGVSAVGPRYKAVSVKKIVSGTGHTTWLTARREGEH 328

Query: 245 VILDGEQILRHID-QLENRFPQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQEY 303
            I DG++IL  I+ +L N+    +LY+GVT++R+C IGS+KSR++T L FHG+ GGDQEY
Sbjct: 329 EIQDGQRILDDINNELVNQVGHPDLYIGVTEQRRCFIGSQKSRVMTFLVFHGVMGGDQEY 388

Query: 304 LYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSIDRK 363
           L+ DGVGI+TGDYFQFY PD +AAL++C N S+N RNL L+ S +  L  R V +++  K
Sbjct: 389 LFADGVGIRTGDYFQFYHPDPSAALSSCSNVSKNFRNLNLDWSSRNCLHARGVYDNVCNK 448

Query: 364 EVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTGQESQE 423
           E++GGF+FSCCGRG SFF   NVDS PF +NFP  P+AGIFC GEIGRG       E QE
Sbjct: 449 ELVGGFVFSCCGRGESFFERCNVDSSPFLDNFPGFPMAGIFCRGEIGRGFSVFNADEGQE 508

Query: 424 ESPAERRYLHVYSTAYLVISYSAA 447
           E  +    LHVYS  YL++SY+ A
Sbjct: 509 ERTS-HCCLHVYSAVYLLVSYTPA 531

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491092|ref|XP_002283895.2| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Vitis vinifera] gi|297734433|emb|CBI15680.3| unnamed protein product [Vitis vinifera]

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/448 (53%), Positives = 303/448 (67%), Gaps = 25/448 (5%)

Query: 7   LVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQ-DHEDIGVNRGICTCGQQSGIVLTV 65
           + K LG  TP+I SV  G++G DA+T+EF+EVK+  D ED  +        +  GIVL V
Sbjct: 100 ITKKLGSATPVITSVARGIIGSDAITEEFKEVKWGVDVEDFNL-----PANKDRGIVLIV 154

Query: 66  GYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASP 125
           G++PGLKVDAIPLLR  E                P + +ID+FVMDI+N++ +VSGC SP
Sbjct: 155 GFMPGLKVDAIPLLRELE---------------EPGISLIDKFVMDIRNFSAAVSGCTSP 199

Query: 126 VGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISDAV 185
            GI+MFG +  D KP++EK+DYAMSM TV +G+E   F YRSGDD RN+ G+     D V
Sbjct: 200 TGIVMFGDKHADMKPVLEKMDYAMSMETVILGEESGHFMYRSGDDSRNISGSLKNSCDGV 259

Query: 186 ALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVR--ANHAEGSTWLTAKREGH 243
           ALVFA D DKP  G GE QFH+A+S GV  +GP HKA SV+   + +E STWLTA++EG 
Sbjct: 260 ALVFARDNDKPQ-GVGETQFHVALSTGVVPVGPTHKAASVKVKGDGSERSTWLTARKEGL 318

Query: 244 HVILDGEQILRHI-DQLENRFPQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQE 302
              LDGE++L  I D++EN     +LY+GVTKRRKCSIGSEK R +TTL FH + GGD+E
Sbjct: 319 KEALDGERLLHDIYDEMENENASHDLYIGVTKRRKCSIGSEKVRWVTTLEFHDVLGGDEE 378

Query: 303 YLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSIDR 362
           YL+VDGVGIKTGD F+FY+ D + AL++CR+ SE  RNLK   + K     R VA+  D+
Sbjct: 379 YLFVDGVGIKTGDPFRFYRSDSDTALSSCRHVSEEFRNLKQAWTHKNSYHFRGVADGGDK 438

Query: 363 KEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTGQESQ 422
            EV GG IFSC GRG+SFFG  NVDS PF ENFP  PLAGI CGGEIGR  LS    +  
Sbjct: 439 TEVCGGIIFSCYGRGDSFFGQANVDSSPFLENFPGFPLAGIMCGGEIGRVHLSSADHQGG 498

Query: 423 EESPAERRYLHVYSTAYLVISYSAAPSE 450
           +E  + R YLH YST YLVIS++ +  E
Sbjct: 499 QEESSPRSYLHYYSTVYLVISHTPSSLE 526

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147863571|emb|CAN79767.1| hypothetical protein VITISV_019403 [Vitis vinifera]

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/448 (53%), Positives = 302/448 (67%), Gaps = 25/448 (5%)

Query: 7   LVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQ-DHEDIGVNRGICTCGQQSGIVLTV 65
           + K LG  TP+I SV  G++G DA+T+EF+EVK+  D ED  +        +  GIVL V
Sbjct: 100 ITKKLGSATPVITSVARGIIGSDAITEEFKEVKWGVDVEDFNL-----PANKDRGIVLIV 154

Query: 66  GYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASP 125
           G++PGLKVDAIPLLR  E                P + +ID+FVMDI+N++ +VSGC SP
Sbjct: 155 GFMPGLKVDAIPLLRELE---------------EPGISLIDKFVMDIRNFSAAVSGCTSP 199

Query: 126 VGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISDAV 185
            GI+MFG +  D KP++EK+DYAMSM TV +G+E   F YRSGDD RN+ G+     D V
Sbjct: 200 TGIVMFGDKHADMKPVLEKMDYAMSMETVILGEESGHFMYRSGDDSRNISGSLKNSCDGV 259

Query: 186 ALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVR--ANHAEGSTWLTAKREGH 243
           ALVFA D DKP  G GE QFH+A+S GV  +GP  KA SV+   + +E STWLTA++EG 
Sbjct: 260 ALVFARDNDKPQ-GVGESQFHVALSTGVVPVGPTLKAASVKVKGDGSERSTWLTARKEGL 318

Query: 244 HVILDGEQILRHI-DQLENRFPQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQE 302
              LDGE++L  I D++EN     +LY+GVTKRRKCSIGSEK R +TTL FH + GGD+E
Sbjct: 319 KEALDGERLLHDIYDEMENENASHDLYIGVTKRRKCSIGSEKVRWVTTLEFHDVLGGDEE 378

Query: 303 YLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSIDR 362
           YL+VDGVGIKTGD F+FY+ D + AL++CR+ SE  RNLK   + K     R VA+  D+
Sbjct: 379 YLFVDGVGIKTGDPFRFYRSDSDTALSSCRHVSEEFRNLKQAWTHKNSYHFRGVADGGDK 438

Query: 363 KEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTGQESQ 422
            EV GG IFSC GRG+SFFG  NVDS PF ENFP  PLAGI CGGEIGR  LS    +  
Sbjct: 439 TEVCGGIIFSCYGRGDSFFGQANVDSSPFLENFPGFPLAGIMCGGEIGRVHLSSADHQGG 498

Query: 423 EESPAERRYLHVYSTAYLVISYSAAPSE 450
           +E  + R YLH YST YLVIS++ +  E
Sbjct: 499 QEESSPRSYLHYYSTVYLVISHTPSSLE 526

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540189|ref|XP_002511159.1| conserved hypothetical protein [Ricinus communis] gi|223550274|gb|EEF51761.1| conserved hypothetical protein [Ricinus communis]

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/448 (53%), Positives = 306/448 (68%), Gaps = 41/448 (9%)

Query: 9   KHLGLRTPIILSVVHGVMGRDALTDE-----FREVKFQDHEDIGVNRGICTCGQQSGIVL 63
           +  G RTP+I++  +G+MGRDA+T+E     +      D E + +N         SG +L
Sbjct: 106 RKFGSRTPLIVTWANGIMGRDAVTNEDDSSNYDGDGDGDDEHMEIN---------SGFLL 156

Query: 64  TVGYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCA 123
           TVG++PGLKVD IP LR+                   P+ MID FVMDI+NYTTS SGC 
Sbjct: 157 TVGFVPGLKVDVIPYLRKIR---------------PAPMEMIDIFVMDIRNYTTSASGCT 201

Query: 124 SPVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISD 183
           SPVGIIMF  ED D KPI+EKLDYAMS  T+ VGDER++F YRS  D      NP   + 
Sbjct: 202 SPVGIIMFASEDFDLKPIMEKLDYAMSKETIIVGDERTKFLYRSRID----STNP--FAK 255

Query: 184 AVALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEGSTWLTAKREGH 243
           A+ALVFA D++KPH G GEIQFH A+S GVSAIGPR+K  S R    + +TWLTA++EG 
Sbjct: 256 AIALVFAKDREKPH-GLGEIQFHAALSNGVSAIGPRYKTASAREAFHDRNTWLTARQEGQ 314

Query: 244 HVILDGEQILRHI-DQLENRFPQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQE 302
             ILDG++IL  I D+LENR    +LY+GVT+ RK  I  EK RL+++L+F+G+ GGD+E
Sbjct: 315 PEILDGQRILNDINDELENRIGDTDLYIGVTELRKRRIRKEKPRLMSSLSFYGVMGGDEE 374

Query: 303 YLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSIDR 362
           YL+V G+GI+T DYFQFY  D +AAL++CRN S N+RNL+L+ S K +L   D AN   +
Sbjct: 375 YLFVHGIGIRTADYFQFYHSDPSAALSSCRNVSANLRNLRLDWSCKKYLYPTDGANEF-K 433

Query: 363 KEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRG-KLSMTGQES 421
           KE +GGFIFSCCGRG +FFG  NVDS PF ENFP  PLAGIFCGGEIGR   +S T  + 
Sbjct: 434 KECIGGFIFSCCGRGEAFFGSPNVDSSPFLENFPGVPLAGIFCGGEIGRSFSISNTLDDR 493

Query: 422 QEESPAERRYLHVYSTAYLVISYSAAPS 449
           +E +P+  R LHV+S+ YLV+SY+ +P+
Sbjct: 494 EESTPS--RCLHVFSSVYLVLSYTPSPA 519

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122060|ref|XP_002318743.1| predicted protein [Populus trichocarpa] gi|222859416|gb|EEE96963.1| predicted protein [Populus trichocarpa]

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/470 (51%), Positives = 313/470 (66%), Gaps = 52/470 (11%)

Query: 7   LVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQDHEDIGVNRGICTCGQQSGIVLTVG 66
           L   LG +TPII+S   G+MGRDA+T E REV  +++   G +    +C    GI+LTVG
Sbjct: 107 LATKLGSQTPIIVSCASGIMGRDAVTGEHREVMLEEYWADGES---ISC---FGIILTVG 160

Query: 67  YLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASPV 126
           +LPGLKVD IPLL+ ++ V  P               ++D FVM+I++Y  SVSG ASP 
Sbjct: 161 FLPGLKVDVIPLLQPRK-VHRPA--------------LVDYFVMNIRDYAASVSGWASPA 205

Query: 127 GIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISDAVA 186
           GII+FG E  DQKP++EKLD+AMS +TV VGDER++F YRSG + RN  G+  +   AVA
Sbjct: 206 GIILFGDEGADQKPVMEKLDHAMSRDTVIVGDERAQFLYRSGVESRNDYGSSEYFPAAVA 265

Query: 187 LVFASDKDKP--------------------HAGTGEIQFHLAMSEGVSAIGPRHKAVSVR 226
           LVFA D+DKP                       TGEIQFH A+S GVSAIGPR+KAVSVR
Sbjct: 266 LVFARDRDKPCGIGLLISVFAISSFATKMDWQCTGEIQFHAALSSGVSAIGPRYKAVSVR 325

Query: 227 ANHAEG--STWLTAKREGHHVILDGEQILRHID-QLENRFPQVELYVGVTKRRKCSIGSE 283
              +E   +T LTA+REG   I DG++IL  I+ +L N+  + +LY+GVT++RKC IGSE
Sbjct: 326 KIGSETGCTTLLTARREGEQEIQDGQRILDDINNELVNQIGRPDLYIGVTEQRKCFIGSE 385

Query: 284 KSRLITTLAFHGIRGGDQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKL 343
           KSR++T L FHG+ GGDQEYL+ DGVGI+TGDYFQFY  D   AL++C   S+N R LKL
Sbjct: 386 KSRVMTFLVFHGVMGGDQEYLFADGVGIRTGDYFQFYHSDPTTALSSCNEVSKNFRKLKL 445

Query: 344 NSSGKGFLGRRDVANSIDRKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGI 403
           + S +  L +  V++++  KE++GGF+FSCCGRG SFF   NVDS PF +NFP  P+AG+
Sbjct: 446 DWSSRNCL-QAGVSDNVCSKELVGGFVFSCCGRGESFFERCNVDSSPFLDNFPGVPMAGV 504

Query: 404 FCGGEIGRGKLSMTGQESQEESPAERRY---LHVYSTAYLVISYSAAPSE 450
           FC GEIGRG   +      +E P ER     LHVYSTAYL++SY+ AP+E
Sbjct: 505 FCRGEIGRGFSVLNA----DEGPEERTLHCCLHVYSTAYLLVSYTPAPAE 550

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488987|gb|ABK96301.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/449 (51%), Positives = 296/449 (65%), Gaps = 32/449 (7%)

Query: 7   LVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQDHEDIGVNRGICTCGQQSGIVLTVG 66
           L   LG +TPII+S   G+MGRDA+TDE++EV  +D    G +          GI+L+VG
Sbjct: 111 LAAKLGSKTPIIVSCAGGIMGRDAVTDEYKEVMIEDFWVDGASN------SSFGIMLSVG 164

Query: 67  YLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASPV 126
           +LPGLKVDAIPLLR ++               A  V M+D+FVMDI+NY   VS   SP 
Sbjct: 165 FLPGLKVDAIPLLRPRK---------------ARGVAMVDKFVMDIRNYAALVSDSTSPS 209

Query: 127 GIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPA--FISDA 184
            IIMFG E  DQKP++EKLD+AMS  T+ VGDER++F YRSG + RNV       + SDA
Sbjct: 210 LIIMFGSEKTDQKPVMEKLDHAMSRETIVVGDERAQFLYRSGIESRNVYYGSVDHYFSDA 269

Query: 185 VALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEG--STWLTAKREG 242
           VALVFA D+++P +GTGEI FH A+S GVSAIGPR KAVS     +E   STWLT +RE 
Sbjct: 270 VALVFARDQNRP-SGTGEIHFHSALSSGVSAIGPRFKAVSANEIESETGLSTWLTVRREA 328

Query: 243 HHVILDGEQILRHIDQLENRF-PQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQ 301
              IL G++I   ID + N    Q +L++GV+++RKC +G EK R + +LAFH + GGD+
Sbjct: 329 EQEILGGQRI---IDDINNELGNQTKLFIGVSEQRKCFVGPEKPRQMRSLAFHEVMGGDE 385

Query: 302 EYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSID 361
           E+L+VDGVGIKTGDYF  Y PD +AAL++C N S+N RNLKL+ S +    +   A  + 
Sbjct: 386 EHLFVDGVGIKTGDYFHLYHPDPSAALSSCSNISKNFRNLKLDWSFRS--CQLHAARGVG 443

Query: 362 RKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTGQES 421
            KEV+GGF+F+C GRG SFFG  NVDS PF +NFP   +AGIF  GEIGRG   +   ES
Sbjct: 444 EKEVIGGFVFACWGRGESFFGHNNVDSSPFLDNFPGVLMAGIFTYGEIGRGFSILNTDES 503

Query: 422 QEESPAERRYLHVYSTAYLVISYSAAPSE 450
            +E       +HVYST YL++SY+ AP E
Sbjct: 504 GQEVKTLCFCVHVYSTVYLLVSYTPAPIE 532

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224118086|ref|XP_002331554.1| predicted protein [Populus trichocarpa] gi|222873778|gb|EEF10909.1| predicted protein [Populus trichocarpa]

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/450 (51%), Positives = 297/450 (66%), Gaps = 33/450 (7%)

Query: 7   LVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQDHEDIGVNRGICTCGQQSGIVLTVG 66
           L   LG +TPII+S   G+MGRDA+TDE++EV  +D    G +          GI+L VG
Sbjct: 107 LAAKLGSKTPIIVSCAGGIMGRDAVTDEYKEVMIEDFWVDGASN------SSFGIMLAVG 160

Query: 67  YLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCASPV 126
           +LPGLKVDAIPLLR ++               A  V M+D+FVMDI+NY   VS   SP 
Sbjct: 161 FLPGLKVDAIPLLRPRK---------------AQGVAMVDKFVMDIRNYAALVSDSTSPS 205

Query: 127 GIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPA--FISDA 184
            IIMFG E  DQKP++EKLD+AMS  T+ VGDER++F YRSG + RNV       + SDA
Sbjct: 206 LIIMFGSEKTDQKPVMEKLDHAMSRETIVVGDERAQFLYRSGIESRNVYYGSVDQYFSDA 265

Query: 185 VALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEG--STWLTAKREG 242
           VALVFA D+++P +GTGEI FH A+S GVSAIGPR KAVS     +E   STWL+ +REG
Sbjct: 266 VALVFARDQNRP-SGTGEIHFHSALSSGVSAIGPRFKAVSANEIESETGLSTWLSVRREG 324

Query: 243 HHVILDGEQILRHIDQLENRF-PQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQ 301
              IL G++I   ID + N    Q +L++GV+++RKC +G EK R + +LAFH + GGD 
Sbjct: 325 GQEILGGQRI---IDDINNELGNQTKLFIGVSEQRKCFVGPEKPRQMRSLAFHEVMGGDV 381

Query: 302 EYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSID 361
           E+L+VDGVGIKTGDYF  Y PD +AAL++C N S+N RNLKL+ S +    +   A  + 
Sbjct: 382 EHLFVDGVGIKTGDYFHLYHPDPSAALSSCSNISKNFRNLKLDWSFRS--CQLHAARGVG 439

Query: 362 RKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRG-KLSMTGQE 420
            KEV+GGF+F+C GRG SFFG  NVDS PF +NFP  P+AGIF  GEIGRG  +  T  E
Sbjct: 440 EKEVIGGFVFACWGRGESFFGHSNVDSSPFLDNFPGVPMAGIFTYGEIGRGFSILNTDFE 499

Query: 421 SQEESPAERRYLHVYSTAYLVISYSAAPSE 450
           S +E       +HVYST YL++SY+ AP E
Sbjct: 500 SGQEDKTLCFCVHVYSTVYLLVSYTPAPIE 529

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115878|ref|XP_002317147.1| predicted protein [Populus trichocarpa] gi|222860212|gb|EEE97759.1| predicted protein [Populus trichocarpa]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 219/450 (48%), Positives = 292/450 (64%), Gaps = 39/450 (8%)

Query: 7   LVKHLGLRTPIILSVVHGVMGRDALTDEFREVKFQDH--EDIGVNRGICTCGQQSGIVLT 64
           L   LG +TPII+S  +G++GRDA+TDE +EV  +D   +    N G        G++LT
Sbjct: 137 LAAKLGSKTPIIVSCANGIIGRDAVTDEHQEVMLEDFWADAASKNSGF-------GVLLT 189

Query: 65  VGYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCAS 124
           VG+LPGL+V+AIPLLR ++               A  + ++D+FVMDI+NY  +VSG  S
Sbjct: 190 VGFLPGLQVEAIPLLRPRKA--------------ASRMALVDKFVMDIRNYAANVSGSTS 235

Query: 125 PVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGN-PAFISD 183
           P  +IMFG E  +QKP++EKLD+AMS  T   GDER++F Y+SG + RNV G+   +ISD
Sbjct: 236 PALVIMFGGEKAEQKPVMEKLDHAMSRETFIAGDERAQFLYKSGIESRNVHGSGNEYISD 295

Query: 184 AVALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEG--STWLTAKRE 241
           AV LVFA D+ +  +  GEIQFH A+S GVS IGPR+K VSV+    E   +T L A+RE
Sbjct: 296 AVVLVFARDRHRA-SDVGEIQFHSALSSGVSTIGPRYKVVSVKEIQPETDLTTCLKARRE 354

Query: 242 GHHVILDGEQILRHIDQLENRF-PQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGD 300
           G   IL G++I   ID + N    + EL++GV+K+R+C IGSE  +L+ +LAFH ++GGD
Sbjct: 355 GEQEILGGQRI---IDDINNELVNKTELFIGVSKQRQCVIGSENPKLLRSLAFHEVKGGD 411

Query: 301 QEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSI 360
            E+L+V G GI +GDYF FY  D  AAL+A  N S+N RNLKL+ S          A  +
Sbjct: 412 GEHLFVSGDGIGSGDYFHFYHSDSKAALSATSNVSKNFRNLKLDWSSSQLH-----AGGV 466

Query: 361 DRKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRG--KLSMTG 418
             KEV+GG +FSC GRG SFFG  NVDS PF +NFP  P+AGIFC GE+GRG   L+   
Sbjct: 467 GSKEVVGGLVFSCWGRGESFFGHSNVDSSPFLDNFPGIPMAGIFCYGEVGRGFTMLNADD 526

Query: 419 QESQEESPAERRYLHVYSTAYLVISYSAAP 448
            E QEE  +    LHVYST Y+++SY+ AP
Sbjct: 527 HEDQEEKTS-CCCLHVYSTIYVLVSYTPAP 555

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118484799|gb|ABK94267.1| unknown [Populus trichocarpa]

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 199/347 (57%), Positives = 255/347 (73%), Gaps = 12/347 (3%)

Query: 110 MDIQNYTTSVSGCASPVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGD 169
           M+I++Y  SVSG ASP GII+FG E  DQKP++EKLD+AMS +TV VGDER++F YRSG 
Sbjct: 1   MNIRDYAASVSGWASPAGIILFGDEGADQKPVMEKLDHAMSRDTVIVGDERAQFLYRSGV 60

Query: 170 DLRNVCGNPAFISDAVALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANH 229
           + RN  G+  +   AVALVFA D+DKP  GTGEIQFH A+S GVSAIGPR+KAVSVR   
Sbjct: 61  ESRNDYGSSEYFPAAVALVFARDRDKP-CGTGEIQFHAALSSGVSAIGPRYKAVSVRKIG 119

Query: 230 AEG--STWLTAKREGHHVILDGEQILRHID-QLENRFPQVELYVGVTKRRKCSIGSEKSR 286
           +E   +T LTA+REG   I DG++IL  I+ +L N+  + +LY+GVT++RKC IGSEKSR
Sbjct: 120 SETGCTTLLTARREGEQEIQDGQRILDDINNELVNQIGRPDLYIGVTEQRKCFIGSEKSR 179

Query: 287 LITTLAFHGIRGGDQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSS 346
           ++T L FHG+ GGDQEYL+ DGVGI+TGDYFQFY  D   AL++C   S+N R LKL+ S
Sbjct: 180 VMTFLVFHGVMGGDQEYLFADGVGIRTGDYFQFYHSDPTTALSSCNEVSKNFRKLKLDWS 239

Query: 347 GKGFLGRRDVANSIDRKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCG 406
            +  L +  V++++  KE++GGF+FSCCGRG SFF   NVDS PF +NFP  P+AG+FC 
Sbjct: 240 SRNCL-QAGVSDNVCSKELVGGFVFSCCGRGESFFERCNVDSSPFLDNFPGVPMAGVFCR 298

Query: 407 GEIGRGKLSMTGQESQEESPAERRY---LHVYSTAYLVISYSAAPSE 450
           GEIGRG   +      +E P ER     LHVYSTAYL++SY+ AP+E
Sbjct: 299 GEIGRGFSVLNA----DEGPEERTLHCCLHVYSTAYLLVSYTPAPAE 341

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516535|ref|XP_003526949.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Glycine max]

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 214/449 (47%), Positives = 282/449 (62%), Gaps = 38/449 (8%)

Query: 9   KHLGLRTPIILSVVHGVMGRDALTDEFREVK----FQDHEDIGVNRGICTCGQQSGIVLT 64
           K LG   P+I++V +G+MGRDA+TDEF+EVK    F    +    R I       G+VLT
Sbjct: 122 KSLGFNIPVIVTVANGIMGRDAVTDEFKEVKWGALFSGFGEESYTRFI-----NEGLVLT 176

Query: 65  VGYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSGCAS 124
           VGYLPGLKV+A+PL R  +  Q     T+VD            F+ DI+ Y+ SVS    
Sbjct: 177 VGYLPGLKVEALPLRRPTKTSQA----TWVD-----------NFIKDIKEYSASVSSSPF 221

Query: 125 PVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRF--AYRSGDDLRNVCGNPAFIS 182
           PVGII+FG+   D K ++EKLD+AM M+ V VGDER  F   ++SG+D R +C     I 
Sbjct: 222 PVGIILFGEASSDMKLVLEKLDHAMPMDMVIVGDERGSFDFVHKSGNDSRIICSKKGNI- 280

Query: 183 DAVALVFASDKDKPHAGTGEIQFHLAMSEGVSAIGPRHKAVSVRANHAEGSTWLTAKREG 242
           +AVALVFA D+D+     G I+FH+A+S GVS +GPR+KA SV++N+A+ STWLTA+REG
Sbjct: 281 EAVALVFAQDRDR---SLGTIRFHVALSNGVSTVGPRYKAASVKSNNADCSTWLTARREG 337

Query: 243 HHVILDGEQILRHIDQL-ENRFPQVELYVGVTKRRKCSIGSEKSRLITTLAFHGIRGGDQ 301
               LDG+ IL  I+ L +N     +LY+GV K RK S G+EK    T +A+HG+ GGD+
Sbjct: 338 QQENLDGQSILLDINNLLDNHIESPDLYIGVIKHRKLSTGAEKPMPRTCIAYHGVVGGDE 397

Query: 302 EYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSID 361
           EYLYVDG+GIKTGD FQFY  D N ALA+     + ++++ L  + K   G  D A +  
Sbjct: 398 EYLYVDGIGIKTGDIFQFYYSDPNTALASLTKVHDALKSIHLEKNSKSSKGDGDNATN-- 455

Query: 362 RKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTGQES 421
              V GG +F+C GRG SFFG  NVDS PF ENFP  P++GIFCGGE+ R   ++ GQ  
Sbjct: 456 ---VFGGIVFACYGRGESFFGRHNVDSSPFLENFPGVPVSGIFCGGEMVRPCTTVIGQ-C 511

Query: 422 QEESPAERRYLHVYSTAYLVISYSAAPSE 450
           +  SP     LHVYST YL +SY+    E
Sbjct: 512 EGASPIS-CCLHVYSTVYLAMSYTPPSVE 539

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	450
UNIPROTKB|H3BTR7	78	FBXO22 "F-box only protein 22"	0.111	0.641	0.442	6.5e-05

UNIPROTKB|H3BTR7 FBXO22 "F-box only protein 22" [Homo sapiens (taxid:9606)]

 Score = 104 (41.7 bits), Expect = 6.5e-05, P = 6.5e-05
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query:   368 GFIFSCCGRGNSFFGGL-NVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTG 418
             GF+F+C GRG  ++    NV++  F + FPS PL G F  GEIG  ++ +TG
Sbjct:    18 GFMFACVGRGFQYYRAKGNVEADAFRKFFPSVPLFGFFGNGEIGCDRI-VTG 68


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.139   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      450       450   0.00092  118 3  11 22  0.38    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  261 KB (2139 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  34.10u 0.14s 34.24t   Elapsed:  00:00:01
  Total cpu time:  34.10u 0.14s 34.24t   Elapsed:  00:00:01
  Start:  Thu May  9 16:18:52 2013   End:  Thu May  9 16:18:53 2013

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006913 "nucleocytoplasmic transport" evidence=IEA

GO:0009267 "cellular response to starvation" evidence=IEA

GO:0010830 "regulation of myotube differentiation" evidence=IEA

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:2000060 "positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00017954001 SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (526 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	450
pfam10442	137	pfam10442, FIST_C, FIST C domain	6e-11
COG4398	389	COG4398, COG4398, Uncharacterized protein conserve	8e-08

>gnl|CDD|220757 pfam10442, FIST_C, FIST C domain

 Score = 59.6 bits (145), Expect = 6e-11
 Identities = 26/102 (25%), Positives = 34/102 (33%), Gaps = 20/102 (19%)

Query: 311 IKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSIDRKEVLGGFI 370
           +  G+  Q    D    +   R A E  R                       +   G  +
Sbjct: 56  VPEGEELQLMLRDAEDLIEDLRRALEAARE--------------------GGRPPAGALL 95

Query: 371 FSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRG 412
           FSC GRG   FG  + +     E    AP+ G F  GEIG G
Sbjct: 96  FSCIGRGLLLFGEPDEELEAVREVLGDAPVIGFFTYGEIGPG 137

The FIST C domain is a novel sensory domain, which is present in signal transduction proteins from Bacteria, Archaea and Eukarya. Chromosomal proximity of FIST-encoding genes to those coding for proteins involved in amino acid metabolism and transport suggest that FIST domains bind small ligands, such as amino acids. Length = 137

>gnl|CDD|226833 COG4398, COG4398, Uncharacterized protein conserved in bacteria [Function unknown]

 Score = 53.7 bits (129), Expect = 8e-08
 Identities = 19/45 (42%), Positives = 24/45 (53%)

Query: 366 LGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIG 410
           +G  +F+C GRG   FG  + D+    E     PLAG F  GEIG
Sbjct: 323 VGALLFTCNGRGRRMFGVPDHDASTIEELLGGIPLAGFFAAGEIG 367

Length = 389

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	450
COG4398	389	Uncharacterized protein conserved in bacteria [Fun	100.0
COG3287	379	Uncharacterized conserved protein [Function unknow	99.9
PF10442	136	FIST_C: FIST C domain; InterPro: IPR019494 This en	99.77
PF08495	198	FIST: FIST N domain; InterPro: IPR013702 The FIST	99.52

>COG4398 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=100.00  E-value=8.8e-50  Score=389.80  Aligned_cols=254  Identities=23%  Similarity=0.307  Sum_probs=218.1

Q ss_pred             cEEEEecCC-CCChHHHHHHhhhhcCCCceeeccc-ccccccccCCCccceeCCCceecCeEEEEEecCCCCCCCCCCce
Q 013065          126 VGIIMFGKE-DMDQKPIIEKLDYAMSMNTVFVGDE-RSRFAYRSGDDLRNVCGNPAFISDAVALVFASDKDKPHAGTGEI  203 (450)
Q Consensus       126 ~gi~~f~d~-~~~~~~ll~gL~~al~~~~vI~Gg~-agd~~f~~g~~~r~~~~~~~~~~~aVaL~f~gd~~~p~a~~G~i  203 (450)
                      ...|++.|+ ++....++++|+.++|.. .++||. +|.   +.+.+.|.++..+.+.++.|++.+.|           +
T Consensus       126 ~~~ilL~dp~t~~~n~li~~l~~~~Pgt-tvvGG~~Sgg---~~~G~~~Lf~~~~~~~~G~vGv~L~G-----------i  190 (389)
T COG4398         126 DLHLLLPDPYTFPSNLLIEHLNTDLPGT-TVVGGVVSGG---RRRGDTRLFRDHDVLTSGVVGVRLPG-----------I  190 (389)
T ss_pred             CceEEccCCcccchHHHhhccCcCCCCc-eEEccEeecC---ccCCceEEeecCCcccCceeEEeecc-----------c
Confidence            456788998 999999999999999975 566664 444   33334445555557777899998754           4


Q ss_pred             EEEEEeccCCeeeCCCeEEEEeccccccCceEEcccccCccccccChhhhhhhh-------HhhccCCCcceeEEEEecc
Q 013065          204 QFHLAMSEGVSAIGPRHKAVSVRANHAEGSTWLTAKREGHHVILDGEQILRHID-------QLENRFPQVELYVGVTKRR  276 (450)
Q Consensus       204 ~~~~~vsqGcrPiGp~~~Vt~v~~T~segNvll~l~~~g~~~eLDg~pAL~~L~-------e~~~~l~~~~L~iGva~~~  276 (450)
                      +....|+|||||||.+|.||     ++++|+|         .||+|+|-|..|.       +.+++|.+++|++|++++|
T Consensus       191 ~l~~vVsQGCRPIGeP~iVt-----~a~~niI---------tEl~gr~PL~~Lr~ii~~lsp~er~L~~~~L~iGi~~DE  256 (389)
T COG4398         191 RLVPVVSQGCRPIGEPYIVT-----GADGNII---------TELGGRPPLQRLREIVEGLSPDERALVSHGLQIGIVVDE  256 (389)
T ss_pred             eecchhccCcccCCCceEee-----ccCceeE---------eecCCCChHHHHHHHhhccChhhHHHHhcCceEEEEehh
Confidence            46689999999999999995     9999999         8889998887555       4488999999999999999


Q ss_pred             cccCCCCCceeEEEEEeecCCCCCceeeEeeccCCCCCCEEEEEcCCHHHHHHHHHHHHHHHHHHhhhcCCCCccccccc
Q 013065          277 KCSIGSEKSRLITTLAFHGIRGGDQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDV  356 (450)
Q Consensus       277 ~~~~~~~~~~~vR~ll~~d~~~gs~e~~i~~g~~I~~G~~vqf~~RD~~aA~~dl~~~~~~lr~l~~~~~~k~~l~~~~~  356 (450)
                      .+.....++|++|.+++.|+.+|+    |.+++-|++|+++||++||++++..|++-..+..   .+++           
T Consensus       257 ~~~~~~qGDFlIR~lLG~DPs~Ga----IaIgd~Vr~G~~lQF~~RD~~as~~dL~~l~er~---~~e~-----------  318 (389)
T COG4398         257 HLAAPGQGDFLIRGLLGADPSTGA----IAIGEVVRVGATLQFQVRDAAAADKDLRLLVERA---AAEL-----------  318 (389)
T ss_pred             hhcCCCCCceEeeeccccCCCCCc----eeecceeccCcEEEEEEcccccchhHHHHHHHHH---HhhC-----------
Confidence            887777899999999999999999    9999999999999999999999998777655444   2232           


Q ss_pred             cCccCCCceeEEEEEEeCCCCcCCCCCCccchHhHHhhCCCCceeeeecccccCCCCCccCCCCCCCCCCcccccccccc
Q 013065          357 ANSIDRKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTGQESQEESPAERRYLHVYS  436 (450)
Q Consensus       357 ~~~~~~~~p~gaLlFSC~GRG~~lfg~~~~E~~~v~e~lp~vPlaGFy~~GEIgP~~~~~v~g~~~~~~~~~~~~LH~yT  436 (450)
                           ...++|||||||+|||..|||.+|+|+++|.+.||++|++||||+|||||     +++         +|+||+||
T Consensus       319 -----~~~avGaLmFsC~GRG~~m~G~p~~Ds~~~~~~~~gipl~GFF~~GEIGp-----V~g---------r~~LHG~T  379 (389)
T COG4398         319 -----PGRAVGALLFTCNGRGRRMFGVPDHDASTIEELLGGIPLAGFFAAGEIGP-----VAG---------RNALHGFT  379 (389)
T ss_pred             -----CCccceeEEEEecCccccccCCCCccHHHHHHHhCCCcccceeecCcccc-----ccc---------hhhhhccc
Confidence                 35789999999999999999999999999999999999999999999999     999         99999999


Q ss_pred             eeEeeeecC
Q 013065          437 TAYLVISYS  445 (450)
Q Consensus       437 ~v~~l~se~  445 (450)
                      +++++|.++
T Consensus       380 s~~ai~~~~  388 (389)
T COG4398         380 ASMALFVDD  388 (389)
T ss_pred             eeeEEEeec
Confidence            999999875

>COG3287 Uncharacterized conserved protein [Function unknown]

Probab=99.90  E-value=5.8e-23  Score=210.23  Aligned_cols=246  Identities=15%  Similarity=0.171  Sum_probs=186.7

Q ss_pred             CCcEEEEecCC-CCChHHHHHHhhhhcCCCceeecccccc-cccccCCCccceeCCCceecCeEEEEEecCCCCCCCCCC
Q 013065          124 SPVGIIMFGKE-DMDQKPIIEKLDYAMSMNTVFVGDERSR-FAYRSGDDLRNVCGNPAFISDAVALVFASDKDKPHAGTG  201 (450)
Q Consensus       124 ~p~gi~~f~d~-~~~~~~ll~gL~~al~~~~vI~Gg~agd-~~f~~g~~~r~~~~~~~~~~~aVaL~f~gd~~~p~a~~G  201 (450)
                      .+.-.+.|-|+ ..-.+.+++++..+....+||.||.||| +.|.++    .++.++.+.++++++++         +.+
T Consensus       128 r~~~~l~f~dgl~~~ee~l~~~~~~~~~~~iPi~GGsAaD~~~~e~t----~v~~~g~v~~~aavi~l---------~~t  194 (379)
T COG3287         128 RPVLALTFIDGLSTSEEVLLDGAVLAALETIPIFGGSAADDLEFERT----YVFDEGEVHEDAAVILL---------FGT  194 (379)
T ss_pred             CceEEEEEeccCCcchhhhhhhhhcccccceeeeccccCCCCccceE----EEEEccccccCceEEEE---------ecc
Confidence            35677889998 5446777776777777889999999999 799887    77778888889655555         356


Q ss_pred             ceEEEEEeccCCeeeCCCeEEEEeccccccCceEEcccccCccccccChhhhhhhhHhh---ccCCC-cceeEEEEeccc
Q 013065          202 EIQFHLAMSEGVSAIGPRHKAVSVRANHAEGSTWLTAKREGHHVILDGEQILRHIDQLE---NRFPQ-VELYVGVTKRRK  277 (450)
Q Consensus       202 ~i~~~~~vsqGcrPiGp~~~Vt~v~~T~segNvll~l~~~g~~~eLDg~pAL~~L~e~~---~~l~~-~~L~iGva~~~~  277 (450)
                      .+.|+++.++||.|.+.+++||     |+++|+|         +||||+||.+.+.+.-   ++++. .-.-.++...+.
T Consensus       195 ~l~f~~~~~~g~~Pt~~~~~VT-----ka~~~vV---------~EiDgePA~e~Y~e~vg~~e~l~~~~~~~~pl~~~~~  260 (379)
T COG3287         195 QLKFGHGFAHGFVPTDKTGVVT-----KADGDVV---------YEIDGEPAAEEYAEVVGAVEELDPEMFIPNPLGVRDL  260 (379)
T ss_pred             eEEeecccccceEEccceEEEE-----eecCcEE---------EEeCCCcHHHHHHHHhCchhhcChhHhcccceEEEeC
Confidence            7779999999999999999996     8899999         9999999999666442   34432 222234433331


Q ss_pred             ccCCCCCceeEEEEEeecCCCCCceeeEeeccCCCCCCEEEEEcCCHHHHHHHHHHHHHHHHHHhhhcCCCCcccccccc
Q 013065          278 CSIGSEKSRLITTLAFHGIRGGDQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVA  357 (450)
Q Consensus       278 ~~~~~~~~~~vR~ll~~d~~~gs~e~~i~~g~~I~~G~~vqf~~RD~~aA~~dl~~~~~~lr~l~~~~~~k~~l~~~~~~  357 (450)
                           ...+++|.+.++|++++.    +.+-..|+.|..++++....  ...++++   .++....++            
T Consensus       261 -----~~~y~vr~p~~~~e~~~~----~f~~~~i~~~v~lr~~~~~~--~~~~~e~---~~~~a~~~~------------  314 (379)
T COG3287         261 -----GPLYYVRAPQFVDEEGGL----IFLSAAIPLGVVLRLGETGG--IERVTER---ALRRAFEDL------------  314 (379)
T ss_pred             -----CCcEEEeCcceeccccce----EEeeccCCCccEEEeecCCc--ccHHHHH---HHHHHHhhc------------
Confidence                 567999999999988554    55566999999999998555  3322222   222223222            


Q ss_pred             CccCCCceeEEEEEEeCCCCcCCCCCCccchHhHHhhCCCCceeeeecccccCCCCCccCCCCCCCCCCcccccccccce
Q 013065          358 NSIDRKEVLGGFIFSCCGRGNSFFGGLNVDSFPFFENFPSAPLAGIFCGGEIGRGKLSMTGQESQEESPAERRYLHVYST  437 (450)
Q Consensus       358 ~~~~~~~p~gaLlFSC~GRG~~lfg~~~~E~~~v~e~lp~vPlaGFy~~GEIgP~~~~~v~g~~~~~~~~~~~~LH~yT~  437 (450)
                          ++++.+-|.|+|++|  .++-+.+.+.+.+++.+|.=|++|||||||++|.     .+         -+..||+|.
T Consensus       315 ----~~~~~~vl~f~C~~R--~l~~~~~~~~~~~~e~l~~~~~vGf~tyGE~~~~-----~g---------~~~h~Nqtf  374 (379)
T COG3287         315 ----PKAPALVLVFDCALR--RLFLDTDKERQPLKEQLPEDPCVGFNTYGEQGPI-----TG---------ENVHHNQTF  374 (379)
T ss_pred             ----cCCCceEEEEehhhh--hhhhhhhhhhhHHHHhcccCceeccccccccccc-----cc---------cceeeeeEE
Confidence                344899999999999  6777999999999999996699999999999993     35         589999998


Q ss_pred             eEeee
Q 013065          438 AYLVI  442 (450)
Q Consensus       438 v~~l~  442 (450)
                      +-..|
T Consensus       375 ~~v~f  379 (379)
T COG3287         375 VGVAF  379 (379)
T ss_pred             EEEeC
Confidence            76553

>PF10442 FIST_C: FIST C domain; InterPro: IPR019494 This entry represents a novel sensory domain, designated FIST C (short for F-box and intracellular signal transduction, C-terminal), which is present in signal transduction proteins from bacteria, archaea and eukaryotes

Probab=99.77  E-value=2.1e-18  Score=152.53  Aligned_cols=98  Identities=23%  Similarity=0.308  Sum_probs=85.6

Q ss_pred             EEEEEeecCCCCCceeeEeeccCCCCCCEEEEEcCCHHHHHHHHHHHHHHHHHHhhhcCCCCccccccccCccCCCceeE
Q 013065          288 ITTLAFHGIRGGDQEYLYVDGVGIKTGDYFQFYQPDHNAALAACRNASENIRNLKLNSSGKGFLGRRDVANSIDRKEVLG  367 (450)
Q Consensus       288 vR~ll~~d~~~gs~e~~i~~g~~I~~G~~vqf~~RD~~aA~~dl~~~~~~lr~l~~~~~~k~~l~~~~~~~~~~~~~p~g  367 (450)
                      +|.++.+|+.+|+    |+++.+|++|+.||||.+|++...++++++++++       .               ..+|.+
T Consensus        37 ir~~~~~~~~~gs----l~~~~~v~eG~~v~l~~~~~~~~~~~~~~~~~~~-------~---------------~~~p~~   90 (136)
T PF10442_consen   37 IRSPLAIDPEDGS----LTFAGDVPEGSEVQLMEGDPEDIIESAEEALEKA-------P---------------GPPPEG   90 (136)
T ss_pred             EeeeeEEcCCCCE----EEEeeecCCCCEEEEEcCCHHHHHHHHHHHHHhh-------c---------------CCCceE
Confidence            9999999998999    9999999999999999999999886555544433       1               357999


Q ss_pred             EEEEEeCCCCcCCCCCCccchHhHHhhCCC-CceeeeecccccCC
Q 013065          368 GFIFSCCGRGNSFFGGLNVDSFPFFENFPS-APLAGIFCGGEIGR  411 (450)
Q Consensus       368 aLlFSC~GRG~~lfg~~~~E~~~v~e~lp~-vPlaGFy~~GEIgP  411 (450)
                      +|+|+|+||...|....+.|++.+++.+|+ +|++||||||||+|
T Consensus        91 ~l~f~C~~R~~~l~~~~~~e~~~~~~~~~~~~p~~Gf~t~GEi~~  135 (136)
T PF10442_consen   91 ALIFSCIGRRLFLGERFDEELEAFQEILGGDAPFIGFYTYGEIGP  135 (136)
T ss_pred             EEEEECCCCHHHhCcchHHHHHHHHHHhCCCCCEEEEcccccccc
Confidence            999999999555555888999999999995 99999999999998

The chromosomal proximity of FIST-encoding genes to those coding for proteins involved in amino acid metabolism and transport suggest that FIST domains bind small ligands, such as amino acids [].

>PF08495 FIST: FIST N domain; InterPro: IPR013702 The FIST N domain is a novel sensory domain, which is present in signal transduction proteins from Bacteria, Archaea and Eukarya

Probab=99.52  E-value=1.1e-13  Score=128.27  Aligned_cols=99  Identities=22%  Similarity=0.360  Sum_probs=85.2

Q ss_pred             CcEEEEecCC-CCChHHHHHHhhhhcCCCceeecccccc-cccccCCCccceeCCCceecC-eEEEEEecCCCCCCCCCC
Q 013065          125 PVGIIMFGKE-DMDQKPIIEKLDYAMSMNTVFVGDERSR-FAYRSGDDLRNVCGNPAFISD-AVALVFASDKDKPHAGTG  201 (450)
Q Consensus       125 p~gi~~f~d~-~~~~~~ll~gL~~al~~~~vI~Gg~agd-~~f~~g~~~r~~~~~~~~~~~-aVaL~f~gd~~~p~a~~G  201 (450)
                      ...+++|.|+ +.+.++++++|.......++|+||.+|+ ..|+++    .++.++++.++ +|+++|.          |
T Consensus        97 ~~~~l~~~d~~~~~~~~~l~~l~~~~~~~~~i~GG~a~~~~~~~~~----~v~~~~~~~~~g~v~~~~~----------~  162 (198)
T PF08495_consen   97 SPFLLLFADGLSSSEEELLEGLYSSVGPDIPIFGGSAGDNLDFERT----YVFANGQVYSDGAVVVAFS----------G  162 (198)
T ss_pred             CcEEEEEeCCCCcCHHHHHHHHHHhcCCCceEEEEECCCCCcCCce----EEEEeeeeccCcEEEEEEc----------C
Confidence            4678899998 8889999999988888899999999999 566665    77766667666 7888874          3


Q ss_pred             ceEEEEEeccCCeeeCCCeEEEEeccccccCceEEcccccCccccccChh
Q 013065          202 EIQFHLAMSEGVSAIGPRHKAVSVRANHAEGSTWLTAKREGHHVILDGEQ  251 (450)
Q Consensus       202 ~i~~~~~vsqGcrPiGp~~~Vt~v~~T~segNvll~l~~~g~~~eLDg~p  251 (450)
                      ++++.+.+.|||+|+|.+++||     ++++|+|         +|||+||
T Consensus       163 ~l~~~~~~~~g~~p~g~~~~VT-----~a~~~~I---------~eld~~P  198 (198)
T PF08495_consen  163 SLKIDSFVSHGWEPIGKPMTVT-----KAEGNII---------YELDGRP  198 (198)
T ss_pred             CceEEEEEecCeEeCCCCEEEE-----EecCCEE---------EEECCcC
Confidence            5679999999999999999996     8899999         9999998

Chromosomal proximity of FIST-encoding genes to those coding for proteins involved in amino acid metabolism and transport suggest that FIST domains bind small ligands, such as amino acids [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00