Citrus Sinensis ID: 013076

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450
MGGAMSFSKWVFVVFVLHLLNPCPVRFSYGSSSSNGLSDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFGPEISLPEGNYRDEL
ccccccHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHcHHHHHHHHHHHHccccEEEcccccEEEEEEccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEccccccccccHHHHHHccccccccEEEEEccccccccEEEEEccccccccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHccccEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccc
cccHHHHHHHHHHHHHHHHHccccHHccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccHcHHHHHHHHHHHHHHHHccccEEccccccEEEEEEccccccEEEEEEcccccccHHcccccccccccccEEccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHHccccccccEEEEEEcccccccEEEEEccccEEEcccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEcccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHcccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
MGGAMSFSKWVFVVFVLHLlnpcpvrfsygssssnglsdiPKKLLNFAKRQELVGWMIGIRRKihqnpelgyqefetSQLIRSELDKmgikykhpvavtgvvgfigtgeppfvalradmdslplqeMVEWEykskipgkmhacghdgHVTMLLGAAKILQEHREELKGTVVLvfqpaeeggggahKVLEAGVLEKVNAIfglhvdpnlpigevasrpgpllagsgffeaviggkgghaaipqhsidpiLAASNVIVSLQHLvsreadpldsQVVTVAKFqgggafnvipdsvliggtfrAFSKESFTQLKQRIEEVIIGQAAVQRCSATVdflskekpffpptinnndlhKYFQTVAGdmldtqkvkvmapvmgsedfsfyqeVMPGYFFFLGMknetlgkvesihspyftlnedalpyGAALHASLALRYLLefgpeislpegnyrdel
MGGAMSFSKWVFVVFVLHLLNPCPVRFSYGSSSSNGLSDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFgpeislpegnyrdel
MGGAMSFSKWVFVVFVLHLLNPCPVRFsygssssnglsDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFGPEISLPEGNYRDEL
******FSKWVFVVFVLHLLNPCPVRFSYGS*****LSDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFGPEI***********
********KWVFVVFVLHLLNPCPVRF*****************LNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRY*******************
MGGAMSFSKWVFVVFVLHLLNPCPVRFSYGSSSSNGLSDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFGPEISLPEGNYRDEL
**GAMSFSKWVFVVFVLHLLNPCPVRFSYGSSSSNGLSDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFG**************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGGAMSFSKWVFVVFVLHLLNPCPVRFSYGSSSSNGLSDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFGPEISLPEGNYRDEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query450 2.2.26 [Sep-21-2011]
O04373440 IAA-amino acid hydrolase yes no 0.977 1.0 0.692 0.0
Q84XG9442 IAA-amino acid hydrolase N/A no 0.886 0.902 0.715 1e-171
Q8S9S4442 IAA-amino acid hydrolase yes no 0.886 0.902 0.715 1e-171
Q9SWX9435 IAA-amino acid hydrolase no no 0.944 0.977 0.658 1e-168
P54970439 IAA-amino acid hydrolase no no 0.875 0.897 0.649 1e-152
P54969438 IAA-amino acid hydrolase no no 0.908 0.933 0.603 1e-146
Q5N8F2456 IAA-amino acid hydrolase no no 0.868 0.857 0.614 1e-143
Q8H3C9455 IAA-amino acid hydrolase no no 0.866 0.857 0.544 1e-124
Q8H3C8444 IAA-amino acid hydrolase no no 0.893 0.905 0.534 1e-123
Q5Z678510 IAA-amino acid hydrolase no no 0.851 0.750 0.536 1e-122
>sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2 Back     alignment and function desciption
 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/446 (69%), Positives = 371/446 (83%), Gaps = 6/446 (1%)

Query: 5   MSFSKWVFVVFVLHLLNPCPVRFSYGSSSSNGLSDIPKKLLNFAKRQELVGWMIGIRRKI 64
           MSF KWV  V +LHLLNP  +     S SSNGLS IP K L  AKR +   WM+GIRR+I
Sbjct: 1   MSFFKWVSFVLILHLLNPTLI-----SCSSNGLSQIPSKFLTLAKRNDFFDWMVGIRRRI 55

Query: 65  HQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPL 124
           H+NPELGY+E ETS+L+R+EL+KMG+ YK+PVAVTGVVG++GTG  PFVALRADMD+L +
Sbjct: 56  HENPELGYEEVETSKLVRAELEKMGVSYKYPVAVTGVVGYVGTGHAPFVALRADMDALAM 115

Query: 125 QEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGA 184
           QEMVEWE+KSK+PGKMHACGHD H TMLLGAAK+L+EH EEL+GTVVLVFQPAEEGGGGA
Sbjct: 116 QEMVEWEHKSKVPGKMHACGHDAHTTMLLGAAKLLKEHEEELQGTVVLVFQPAEEGGGGA 175

Query: 185 HKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHS 244
            K++EAGVLE V+AIFGLHV   L +G+V+SR GP+LAGSGFF+A I GKGGHAA+PQH+
Sbjct: 176 KKIVEAGVLENVSAIFGLHVTNQLALGQVSSREGPMLAGSGFFKAKISGKGGHAALPQHT 235

Query: 245 IDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKE 304
           IDPILAASNVIVSLQHLVSREADPLDSQVVTVAKF+GGGAFNVIPDSV IGGTFRAFS +
Sbjct: 236 IDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFEGGGAFNVIPDSVTIGGTFRAFSTK 295

Query: 305 SFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQ 364
           SF QLK+RIE+VI  QA+V  C+ATVDF+ +EKPFFPPT+N+  LH++F+ V+GDML  +
Sbjct: 296 SFMQLKKRIEQVITRQASVNMCNATVDFIEEEKPFFPPTVNDKALHQFFKNVSGDMLGIE 355

Query: 365 KVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALH 424
               M P+MGSEDFSFYQ+ +PG+F F+GM+N+    + S HSPYF +NE+ LPYGA+LH
Sbjct: 356 NYVEMQPLMGSEDFSFYQQAIPGHFSFVGMQNKARSPMASPHSPYFEVNEELLPYGASLH 415

Query: 425 ASLALRYLLEFGPEISLPEGNYRDEL 450
           AS+A RYLLE     +L + N +DEL
Sbjct: 416 ASMATRYLLELKAS-TLNKSNKKDEL 440
Hydrolyzes certain amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Ala.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -
>sp|Q84XG9|ILL1_ORYSI IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|Q8S9S4|ILL1_ORYSJ IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SWX9|ILL5_ARATH IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1 Back     alignment and function description
>sp|P54970|ILL2_ARATH IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2 Back     alignment and function description
>sp|P54969|ILL1_ARATH IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1 Back     alignment and function description
>sp|Q5N8F2|ILL2_ORYSJ IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1 Back     alignment and function description
>sp|Q8H3C9|ILL7_ORYSJ IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica GN=ILL7 PE=2 SV=1 Back     alignment and function description
>sp|Q8H3C8|ILL8_ORYSJ IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sativa subsp. japonica GN=ILL8 PE=2 SV=1 Back     alignment and function description
>sp|Q5Z678|ILL6_ORYSJ IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query450
224070738438 iaa-amino acid hydrolase 11 [Populus tri 0.973 1.0 0.757 0.0
269980527438 IAA-amino acid hydrolase [Populus toment 0.973 1.0 0.755 0.0
49524068438 putative auxin-amidohydrolase precursor 0.973 1.0 0.753 0.0
225442363441 PREDICTED: IAA-amino acid hydrolase ILR1 0.98 1.0 0.760 0.0
147782365441 hypothetical protein VITISV_033718 [Viti 0.98 1.0 0.760 0.0
449458197449 PREDICTED: IAA-amino acid hydrolase ILR1 0.988 0.991 0.735 0.0
255549684435 IAA-amino acid hydrolase ILR1 precursor, 0.966 1.0 0.742 0.0
404325816441 jasmonoyl-L-isoleucine hydrolase 1 [Nico 0.977 0.997 0.709 0.0
356550474444 PREDICTED: IAA-amino acid hydrolase ILR1 0.98 0.993 0.736 0.0
356556658444 PREDICTED: IAA-amino acid hydrolase ILR1 0.98 0.993 0.731 0.0
>gi|224070738|ref|XP_002303219.1| iaa-amino acid hydrolase 11 [Populus trichocarpa] gi|222840651|gb|EEE78198.1| iaa-amino acid hydrolase 11 [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/446 (75%), Positives = 384/446 (86%), Gaps = 8/446 (1%)

Query: 5   MSFSKWVFVVFVLHLLNPCPVRFSYGSSSSNGLSDIPKKLLNFAKRQELVGWMIGIRRKI 64
           MS   WV + F L+LL+P          S NG SDIP + LN+AK++EL  WM+G+RRKI
Sbjct: 1   MSLFNWVSLGFFLYLLSPI--------LSLNGSSDIPSRFLNYAKKEELFDWMVGVRRKI 52

Query: 65  HQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPL 124
           H+NPELG++EFETS+L+R+ELDK+G+KYKHP++VTGVVGFIG+G+PPFVALRADMD+L +
Sbjct: 53  HENPELGFEEFETSKLVRAELDKIGVKYKHPLSVTGVVGFIGSGKPPFVALRADMDALAM 112

Query: 125 QEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGA 184
           QEMVEWEYKSK+PGKMHACGHD HV MLLGAAKILQ+HREELKGTVVL+FQPAEEGGGGA
Sbjct: 113 QEMVEWEYKSKVPGKMHACGHDSHVAMLLGAAKILQDHREELKGTVVLIFQPAEEGGGGA 172

Query: 185 HKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHS 244
            K+++ G LE VNAIFGLHV   LPIGEVASR GPLLAGSGFFEAVI GKGGHAAIPQHS
Sbjct: 173 KKMIDEGALENVNAIFGLHVANKLPIGEVASRHGPLLAGSGFFEAVISGKGGHAAIPQHS 232

Query: 245 IDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKE 304
           IDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSV IGGTFRAF KE
Sbjct: 233 IDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVTIGGTFRAFLKE 292

Query: 305 SFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQ 364
           SF QLKQRIEEV+ GQAAVQRC A ++FL  EKPFFPPTIN+  LH YF+ VA DML   
Sbjct: 293 SFMQLKQRIEEVVTGQAAVQRCKAVINFLENEKPFFPPTINDKYLHDYFRIVASDMLGID 352

Query: 365 KVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALH 424
           KVK M P+MGSEDF+FYQE++PGYFFF+GM+NET  +++S HSPYF +NED LPYGAALH
Sbjct: 353 KVKDMQPLMGSEDFAFYQEMIPGYFFFIGMQNETHKQLQSPHSPYFEINEDVLPYGAALH 412

Query: 425 ASLALRYLLEFGPEISLPEGNYRDEL 450
           ASLA RYLLEF PE++LPE N  DEL
Sbjct: 413 ASLAARYLLEFQPEVTLPEENDHDEL 438

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|269980527|gb|ACZ56438.1| IAA-amino acid hydrolase [Populus tomentosa] Back     alignment and taxonomy information
>gi|49524068|emb|CAG32961.1| putative auxin-amidohydrolase precursor [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|225442363|ref|XP_002281321.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 4 [Vitis vinifera] gi|297743123|emb|CBI35990.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147782365|emb|CAN70580.1| hypothetical protein VITISV_033718 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449458197|ref|XP_004146834.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Cucumis sativus] gi|449476689|ref|XP_004154807.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255549684|ref|XP_002515893.1| IAA-amino acid hydrolase ILR1 precursor, putative [Ricinus communis] gi|223544798|gb|EEF46313.1| IAA-amino acid hydrolase ILR1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|404325816|gb|AFR58665.1| jasmonoyl-L-isoleucine hydrolase 1 [Nicotiana attenuata] Back     alignment and taxonomy information
>gi|356550474|ref|XP_003543612.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] Back     alignment and taxonomy information
>gi|356556658|ref|XP_003546640.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query450
TAIR|locus:2017607440 IAR3 "AT1G51760" [Arabidopsis 0.977 1.0 0.677 1.3e-164
TAIR|locus:2017577435 ILL5 "AT1G51780" [Arabidopsis 0.944 0.977 0.644 6.2e-149
TAIR|locus:2164976439 ILL2 "AT5G56660" [Arabidopsis 0.902 0.924 0.632 1.9e-138
TAIR|locus:2165076438 ILL1 "AT5G56650" [Arabidopsis 0.902 0.926 0.605 1.4e-133
TAIR|locus:2075382442 ILR1 "AT3G02875" [Arabidopsis 0.955 0.972 0.503 1.4e-110
TAIR|locus:2823614464 ILL6 "IAA-leucine resistant (I 0.855 0.829 0.530 6.1e-110
TAIR|locus:2166557428 ILL3 "AT5G54140" [Arabidopsis 0.842 0.885 0.502 4.9e-101
TIGR_CMR|SPO_2808387 SPO_2808 "amidohydrolase famil 0.811 0.943 0.388 3.7e-64
TIGR_CMR|SPO_2809389 SPO_2809 "amidohydrolase famil 0.815 0.943 0.410 3e-62
TIGR_CMR|SPO_2811388 SPO_2811 "amidohydrolase famil 0.813 0.943 0.378 7.9e-62
TAIR|locus:2017607 IAR3 "AT1G51760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1602 (569.0 bits), Expect = 1.3e-164, P = 1.3e-164
 Identities = 302/446 (67%), Positives = 364/446 (81%)

Query:     5 MSFSKWVFVVFVLHLLNPCPVRFXXXXXXXXXXXDIPKKLLNFAKRQELVGWMIGIRRKI 64
             MSF KWV  V +LHLLNP  +              IP K L  AKR +   WM+GIRR+I
Sbjct:     1 MSFFKWVSFVLILHLLNPTLI-----SCSSNGLSQIPSKFLTLAKRNDFFDWMVGIRRRI 55

Query:    65 HQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPL 124
             H+NPELGY+E ETS+L+R+EL+KMG+ YK+PVAVTGVVG++GTG  PFVALRADMD+L +
Sbjct:    56 HENPELGYEEVETSKLVRAELEKMGVSYKYPVAVTGVVGYVGTGHAPFVALRADMDALAM 115

Query:   125 QEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGA 184
             QEMVEWE+KSK+PGKMHACGHD H TMLLGAAK+L+EH EEL+GTVVLVFQPAEEGGGGA
Sbjct:   116 QEMVEWEHKSKVPGKMHACGHDAHTTMLLGAAKLLKEHEEELQGTVVLVFQPAEEGGGGA 175

Query:   185 HKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHS 244
              K++EAGVLE V+AIFGLHV   L +G+V+SR GP+LAGSGFF+A I GKGGHAA+PQH+
Sbjct:   176 KKIVEAGVLENVSAIFGLHVTNQLALGQVSSREGPMLAGSGFFKAKISGKGGHAALPQHT 235

Query:   245 IDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKE 304
             IDPILAASNVIVSLQHLVSREADPLDSQVVTVAKF+GGGAFNVIPDSV IGGTFRAFS +
Sbjct:   236 IDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFEGGGAFNVIPDSVTIGGTFRAFSTK 295

Query:   305 SFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQ 364
             SF QLK+RIE+VI  QA+V  C+ATVDF+ +EKPFFPPT+N+  LH++F+ V+GDML  +
Sbjct:   296 SFMQLKKRIEQVITRQASVNMCNATVDFIEEEKPFFPPTVNDKALHQFFKNVSGDMLGIE 355

Query:   365 KVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALH 424
                 M P+MGSEDFSFYQ+ +PG+F F+GM+N+    + S HSPYF +NE+ LPYGA+LH
Sbjct:   356 NYVEMQPLMGSEDFSFYQQAIPGHFSFVGMQNKARSPMASPHSPYFEVNEELLPYGASLH 415

Query:   425 ASLALRYLLEFGPEISLPEGNYRDEL 450
             AS+A RYLLE     +L + N +DEL
Sbjct:   416 ASMATRYLLELKAS-TLNKSNKKDEL 440
GO:0006508 "proteolysis" evidence=ISS
GO:0008152 "metabolic process" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM
GO:0016787 "hydrolase activity" evidence=IEA
GO:0010179 "IAA-Ala conjugate hydrolase activity" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009611 "response to wounding" evidence=IEP
TAIR|locus:2017577 ILL5 "AT1G51780" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164976 ILL2 "AT5G56660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165076 ILL1 "AT5G56650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075382 ILR1 "AT3G02875" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2823614 ILL6 "IAA-leucine resistant (ILR)-like gene 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166557 ILL3 "AT5G54140" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2808 SPO_2808 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2809 SPO_2809 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2811 SPO_2811 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P80092CBPX1_SULSO3, ., 4, ., 1, 7, ., -0.36740.820.9389yesno
O04373ILL4_ARATH3, ., 5, ., 1, ., -0.69280.97771.0yesno
Q84XG9ILL1_ORYSI3, ., 5, ., 1, ., -0.7150.88660.9027N/Ano
P58156CBPX2_SULSO3, ., 4, ., 1, 7, ., -0.38050.820.9389yesno
P54955YXEP_BACSU3, ., -, ., -, ., -0.42510.80440.9526yesno
P45493HIPO_CAMJE3, ., 5, ., 1, ., 3, 20.36850.81550.9582yesno
Q8S9S4ILL1_ORYSJ3, ., 5, ., 1, ., -0.7150.88660.9027yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ILL11
iaa-amino acid hydrolase 11 (439 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query450
cd08017377 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-aceti 0.0
PLN02693437 PLN02693, PLN02693, IAA-amino acid hydrolase 0.0
PLN02280478 PLN02280, PLN02280, IAA-amino acid hydrolase 0.0
cd03886372 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 fa 0.0
cd08019372 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoa 1e-157
cd05666373 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylas 1e-155
COG1473392 COG1473, AbgB, Metal-dependent amidase/aminoacylas 1e-154
TIGR01891363 TIGR01891, amidohydrolases, amidohydrolase 1e-138
cd08660363 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 1e-136
cd05669372 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoac 1e-135
cd05667402 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylas 1e-129
cd08014372 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylas 1e-118
cd05664398 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylas 1e-110
cd05670367 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoac 7e-95
cd08018365 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoac 1e-69
pfam01546310 pfam01546, Peptidase_M20, Peptidase family M20/M25 3e-65
cd05665415 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Amin 3e-62
cd05668374 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylas 1e-56
cd03887358 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1- 3e-31
cd09849388 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacy 1e-30
cd03873237 cd03873, Zinc_peptidase_like, Zinc peptidases M18, 8e-28
cd05672358 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacyla 4e-27
cd08659365 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylo 9e-21
cd05673434 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacyla 2e-17
COG0624409 COG0624, ArgE, Acetylornithine deacetylase/Succiny 2e-14
cd03885363 cd03885, M20_CPDG2, M20 Peptidase Glutamate carbox 3e-12
cd05683366 cd05683, M20_peptT_like, M20 Peptidase T like enzy 3e-11
pfam07687107 pfam07687, M20_dimer, Peptidase dimerisation domai 6e-11
TIGR01910375 TIGR01910, DapE-ArgE, acetylornithine deacetylase 1e-08
PRK08651394 PRK08651, PRK08651, succinyl-diaminopimelate desuc 9e-08
PRK07338402 PRK07338, PRK07338, hypothetical protein; Provisio 1e-06
cd03896359 cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspar 3e-06
cd08011390 cd08011, M20_ArgE_DapE_like6, M20 Peptidases with 5e-06
PRK09290413 PRK09290, PRK09290, allantoate amidohydrolase; Rev 6e-06
cd02697395 cd02697, M20_like, M20 Zn-peptidases include exope 2e-05
PRK08588377 PRK08588, PRK08588, succinyl-diaminopimelate desuc 3e-05
TIGR01892364 TIGR01892, AcOrn-deacetyl, acetylornithine deacety 4e-05
cd03884399 cd03884, M20_bAS, M20 Peptidase beta-alanine synth 4e-05
TIGR01883361 TIGR01883, PepT-like, peptidase T-like protein 5e-05
cd05649376 cd05649, M20_ArgE_DapE_like4, M20 Peptidases with 7e-05
cd03891366 cd03891, M20_DapE_proteobac, M20 Peptidase proteob 7e-04
cd03894372 cd03894, M20_ArgE, M20 Peptidase acetylornithine d 7e-04
cd05652335 cd05652, M20_ArgE_DapE_like_fungal, M20 Peptidases 0.001
PRK12893412 PRK12893, PRK12893, allantoate amidohydrolase; Rev 0.001
TIGR01246370 TIGR01246, dapE_proteo, succinyl-diaminopimelate d 0.001
TIGR01900351 TIGR01900, dapE-gram_pos, succinyl-diaminopimelate 0.003
TIGR01879400 TIGR01879, hydantase, amidase, hydantoinase/carbam 0.003
PRK06133410 PRK06133, PRK06133, glutamate carboxypeptidase; Re 0.004
>gnl|CDD|193564 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid hydrolase Back     alignment and domain information 
 Score =  667 bits (1724), Expect = 0.0
 Identities = 244/376 (64%), Positives = 305/376 (81%)

Query: 57  MIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALR 116
           ++ IRR+IH+NPEL ++E ETS LIR ELD +GI Y++PVA TG+V  IG+G PP VALR
Sbjct: 1   LVRIRREIHENPELAFEEHETSALIRRELDALGIPYRYPVAKTGIVATIGSGSPPVVALR 60

Query: 117 ADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQP 176
           ADMD+LP+QE+VEWE+KSK+ GKMHACGHD HVTMLLGAAK+L+     LKGTV L+FQP
Sbjct: 61  ADMDALPIQELVEWEHKSKVDGKMHACGHDAHVTMLLGAAKLLKAREHLLKGTVRLLFQP 120

Query: 177 AEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGG 236
           AEEGG GA ++++ G L+ V AIFG+HVDP LP G VASRPGP+LAG+G FEAVI GKGG
Sbjct: 121 AEEGGAGAKEMIKEGALDDVEAIFGMHVDPALPTGTVASRPGPILAGAGRFEAVIRGKGG 180

Query: 237 HAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGG 296
           HAA+P H++DP+LAAS+ +V+LQ LVSRE DPLDSQVV+V +F GG AFNVIPDSV  GG
Sbjct: 181 HAAMPHHTVDPVLAASSAVVALQQLVSRETDPLDSQVVSVTRFNGGHAFNVIPDSVTFGG 240

Query: 297 TFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTV 356
           T RA + E F +L+QRIEEVI GQAAV RC+ATVDF   E+P +PPT+N+  L+++ + V
Sbjct: 241 TLRALTTEGFYRLRQRIEEVIEGQAAVHRCNATVDFSEDERPPYPPTVNDERLYEHAKKV 300

Query: 357 AGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDA 416
           A D+L  + VK+  PVMG+EDF+FY E +PG FFFLG++NET G V S+HSPYF L+E+ 
Sbjct: 301 AADLLGPENVKIAPPVMGAEDFAFYAEKIPGAFFFLGIRNETAGSVHSLHSPYFFLDEEV 360

Query: 417 LPYGAALHASLALRYL 432
           LP GAALHA++A RYL
Sbjct: 361 LPVGAALHAAVAERYL 376

Peptidase M20 family, Plant Aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase (IAA-Asp hydrolase; IAAspH; IAAH; IAA amidohydrolase; EC 3.5.1.-) subfamily. IAAspH hydrolyzes indole-3-acetyl-N-aspartic acid (IAA or auxin) to indole-3-acetic acid. Genes encoding IAA-amidohydrolases were first cloned from Arabidopsis; ILR1, IAR3, ILL1 and ILL2 encode active IAA- amino acid hydrolases, and three additional amidohydrolase-like genes (ILL3, ILL5, ILL6) have been isolated. In higher plants, the growth regulator indole-3-acetic acid (IAA or auxin) is found both free and conjugated via amide bonding to a variety of amino acids and peptides, and via an ester linkage to carbohydrates. IAA-Asp conjugates are involved in homeostatic control, protection, storing and subsequent use of free IAA. IAA-Asp is also found in some plants as a unique intermediate for entering into IAA non-decarboxylative oxidative pathway. IAA amidohydrolase cleaves the amide bond between the auxin and the conjugated amino acid. Enterobacter agglomerans IAAspH has very strong enzyme activity and substrate specificity towards IAA-Asp, although its substrate affinity is weaker compared to Arabidopsis enzymes of the ILR1 gene family. Enhanced IAA-hydrolase activity has been observed during clubroot disease in Chinese cabbage. Length = 377
>gnl|CDD|178296 PLN02693, PLN02693, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|215158 PLN02280, PLN02280, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|193507 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family Back     alignment and domain information
>gnl|CDD|193566 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193542 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|224390 COG1473, AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>gnl|CDD|233621 TIGR01891, amidohydrolases, amidohydrolase Back     alignment and domain information
>gnl|CDD|193571 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 1-like family Back     alignment and domain information
>gnl|CDD|193545 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoacyclase-1 YxeP-like proteins, including YxeP, YtnL, YjiB and HipO2 Back     alignment and domain information
>gnl|CDD|193543 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193562 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193540 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193546 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoacyclase-1 YkuR-like proteins, including YkuR and Ama/HipO/HyuC proteins Back     alignment and domain information
>gnl|CDD|193565 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoacylase 1 amhX_like subfamily Back     alignment and domain information
>gnl|CDD|216562 pfam01546, Peptidase_M20, Peptidase family M20/M25/M40 Back     alignment and domain information
>gnl|CDD|193541 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase from bacteria and archaea Back     alignment and domain information
>gnl|CDD|193544 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193508 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|193573 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|193495 cd03873, Zinc_peptidase_like, Zinc peptidases M18, M20, M28, and M42 Back     alignment and domain information
>gnl|CDD|193547 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacylase 1-like protein 2-like, amidohydrolase subfamily Back     alignment and domain information
>gnl|CDD|193570 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like Back     alignment and domain information
>gnl|CDD|193548 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacylase 1-like protein 2 aminobenzoyl-glutamate utilization protein B subfamily Back     alignment and domain information
>gnl|CDD|223697 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|193506 cd03885, M20_CPDG2, M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme Back     alignment and domain information
>gnl|CDD|193558 cd05683, M20_peptT_like, M20 Peptidase T like enzymes specifically cleave tripeptides Back     alignment and domain information
>gnl|CDD|219515 pfam07687, M20_dimer, Peptidase dimerisation domain Back     alignment and domain information
>gnl|CDD|233632 TIGR01910, DapE-ArgE, acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>gnl|CDD|236323 PRK08651, PRK08651, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|235995 PRK07338, PRK07338, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|193516 cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspartic acid) hydrolase-like proteins Back     alignment and domain information
>gnl|CDD|193559 cd08011, M20_ArgE_DapE_like6, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|236456 PRK09290, PRK09290, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|193494 cd02697, M20_like, M20 Zn-peptidases include exopeptidases Back     alignment and domain information
>gnl|CDD|181490 PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|130947 TIGR01892, AcOrn-deacetyl, acetylornithine deacetylase (ArgE) Back     alignment and domain information
>gnl|CDD|193505 cd03884, M20_bAS, M20 Peptidase beta-alanine synthase, an amidohydrolase Back     alignment and domain information
>gnl|CDD|162579 TIGR01883, PepT-like, peptidase T-like protein Back     alignment and domain information
>gnl|CDD|193526 cd05649, M20_ArgE_DapE_like4, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|193511 cd03891, M20_DapE_proteobac, M20 Peptidase proteobacterial DapE encoded N-succinyl-L,L-diaminopimelic acid desuccinylase Back     alignment and domain information
>gnl|CDD|193514 cd03894, M20_ArgE, M20 Peptidase acetylornithine deacetylase Back     alignment and domain information
>gnl|CDD|193529 cd05652, M20_ArgE_DapE_like_fungal, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|237250 PRK12893, PRK12893, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|162269 TIGR01246, dapE_proteo, succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>gnl|CDD|233628 TIGR01900, dapE-gram_pos, succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>gnl|CDD|200138 TIGR01879, hydantase, amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>gnl|CDD|235710 PRK06133, PRK06133, glutamate carboxypeptidase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 450
PLN02693437 IAA-amino acid hydrolase 100.0
PLN02280478 IAA-amino acid hydrolase 100.0
PRK06915422 acetylornithine deacetylase; Validated 100.0
COG1473392 AbgB Metal-dependent amidase/aminoacylase/carboxyp 100.0
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK06133410 glutamate carboxypeptidase; Reviewed 100.0
TIGR01891363 amidohydrolases amidohydrolase. This model represe 100.0
PRK07338402 hypothetical protein; Provisional 100.0
PRK06837427 acetylornithine deacetylase; Provisional 100.0
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK08596421 acetylornithine deacetylase; Validated 100.0
PRK13004399 peptidase; Reviewed 100.0
PRK13983400 diaminopimelate aminotransferase; Provisional 100.0
TIGR03526395 selenium_YgeY putative selenium metabolism hydrola 100.0
TIGR03320395 ygeY M20/DapE family protein YgeY. Members of this 100.0
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 100.0
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 100.0
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 100.0
PRK06446436 hypothetical protein; Provisional 100.0
PRK07522385 acetylornithine deacetylase; Provisional 100.0
PRK08201456 hypothetical protein; Provisional 100.0
PRK05111383 acetylornithine deacetylase; Provisional 100.0
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 100.0
PRK09133472 hypothetical protein; Provisional 100.0
PRK07473376 carboxypeptidase; Provisional 100.0
PRK08652347 acetylornithine deacetylase; Provisional 100.0
PRK07907449 hypothetical protein; Provisional 100.0
PRK00466346 acetyl-lysine deacetylase; Validated 100.0
PRK09104464 hypothetical protein; Validated 100.0
PRK08262486 hypothetical protein; Provisional 100.0
PRK04443348 acetyl-lysine deacetylase; Provisional 100.0
PRK07906426 hypothetical protein; Provisional 100.0
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 100.0
TIGR01883361 PepT-like peptidase T-like protein. This model rep 100.0
PRK08737364 acetylornithine deacetylase; Provisional 100.0
TIGR01900373 dapE-gram_pos succinyl-diaminopimelate desuccinyla 100.0
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK07079469 hypothetical protein; Provisional 100.0
PRK13381404 peptidase T; Provisional 100.0
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 100.0
PRK07318466 dipeptidase PepV; Reviewed 100.0
PRK06156520 hypothetical protein; Provisional 100.0
PRK05469408 peptidase T; Provisional 100.0
PRK12892412 allantoate amidohydrolase; Reviewed 100.0
PRK07205444 hypothetical protein; Provisional 100.0
PRK12893412 allantoate amidohydrolase; Reviewed 100.0
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 100.0
PRK09290413 allantoate amidohydrolase; Reviewed 100.0
TIGR01882410 peptidase-T peptidase T. This model represents a t 100.0
PRK12891414 allantoate amidohydrolase; Reviewed 100.0
PRK12890414 allantoate amidohydrolase; Reviewed 100.0
TIGR01887447 dipeptidaselike dipeptidase, putative. This model 100.0
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 100.0
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 100.0
PRK15026485 aminoacyl-histidine dipeptidase; Provisional 100.0
KOG2275420 consensus Aminoacylase ACY1 and related metalloexo 100.0
KOG2276473 consensus Metalloexopeptidases [Amino acid transpo 100.0
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 100.0
PRK08554438 peptidase; Reviewed 100.0
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 100.0
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 100.0
COG2195414 PepD Di- and tripeptidases [Amino acid transport a 99.94
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 99.89
COG4187553 RocB Arginine degradation protein (predicted deacy 99.8
PF07687111 M20_dimer: Peptidase dimerisation domain This fami 99.75
PRK09961344 exoaminopeptidase; Provisional 99.73
TIGR03106343 trio_M42_hydro hydrolase, peptidase M42 family. Th 99.73
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 99.69
COG1363355 FrvX Cellulase M and related proteins [Carbohydrat 99.68
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 99.67
PRK09864356 putative peptidase; Provisional 99.64
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 98.68
KOG2194 834 consensus Aminopeptidases of the M20 family [Postt 98.07
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 98.07
KOG2526555 consensus Predicted aminopeptidases - M20/M25/M40 96.41
KOG3946338 consensus Glutaminyl cyclase [Posttranslational mo 96.14
COG2234435 Iap Predicted aminopeptidases [General function pr 95.94
PRK00913483 multifunctional aminopeptidase A; Provisional 95.17
KOG2195702 consensus Transferrin receptor and related protein 95.06
cd00433468 Peptidase_M17 Cytosol aminopeptidase family, N-ter 94.42
PF00883311 Peptidase_M17: Cytosol aminopeptidase family, cata 94.13
PF05450234 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastri 93.01
PRK05015424 aminopeptidase B; Provisional 91.05
KOG2597513 consensus Predicted aminopeptidase of the M17 fami 90.95
PTZ00412569 leucyl aminopeptidase; Provisional 90.44
PRK02256462 putative aminopeptidase 1; Provisional 90.32
PTZ00371465 aspartyl aminopeptidase; Provisional 89.5
PRK02813428 putative aminopeptidase 2; Provisional 89.33
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 88.15
COG0260485 PepB Leucyl aminopeptidase [Amino acid transport a 85.16
>PLN02693 IAA-amino acid hydrolase Back     alignment and domain information 
Probab=100.00  E-value=7.3e-63  Score=495.61  Aligned_cols=407  Identities=63%  Similarity=1.045  Sum_probs=345.7

Q ss_pred             ChhHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEee
Q 013076           39 DIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRAD  118 (450)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H  118 (450)
                      +.+.++.+..++.+..+++++++++|+++|++|++|.++++||.++|+++||+++...+++||+|.++++++|+|+|+||
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~g~~i~l~~h  110 (437)
T PLN02693         31 QIQINLLELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGTGEPPFVALRAD  110 (437)
T ss_pred             hhHHHHHHHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECCCCCCEEEEEee
Confidence            34555666555522337799999999999999999999999999999999999875446789999996555699999999


Q ss_pred             ccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCccchHHHHHcccccccce
Q 013076          119 MDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNA  198 (450)
Q Consensus       119 ~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~~d~  198 (450)
                      |||||+++..+|++++..+|++||||+|+++|++++|+++|++.+..++++|.|+|++|||++.|++.++++|.+++.|+
T Consensus       111 ~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~  190 (437)
T PLN02693        111 MDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEA  190 (437)
T ss_pred             cCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCCCE
Confidence            99999988788999988899999999999999999999999988767889999999999997689999999988777789


Q ss_pred             EEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEE
Q 013076          199 IFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAK  278 (450)
Q Consensus       199 ~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~  278 (450)
                      ++++|.++..+.|.+..+.|..++|..+++|+++|+++|++.|+.|+|||..+++++.+|+++..+..++....+++++.
T Consensus       191 iig~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~  270 (437)
T PLN02693        191 IFGIHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSK  270 (437)
T ss_pred             EEEEecCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEE
Confidence            99999988778888877878888999999999999999999999999999999999999999866655566678999999


Q ss_pred             EecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHH
Q 013076          279 FQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAG  358 (450)
Q Consensus       279 i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~  358 (450)
                      |+||...|+||++|++.+|+|+.++.  +.+.++|+++++..+..+++.+++++.....+++++..+|+++++.++++++
T Consensus       271 i~GG~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~  348 (437)
T PLN02693        271 VNGGNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVR  348 (437)
T ss_pred             EEcCCCCceECCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHH
Confidence            99999999999999999999999974  5899999999998877788877776631113456777888899999999999


Q ss_pred             hhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhhcCCC
Q 013076          359 DMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFGPE  438 (450)
Q Consensus       359 ~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~~~~  438 (450)
                      +.+|.+++......+|++|+++|.+.+|++++.+|+.+...| ....|+|+++++.+.|..++++|+.++.++++.....
T Consensus       349 ~~~G~~~~~~~~~~~gseDf~~~~~~vP~~~~~lG~~~~~~~-~~~~H~~~f~~de~~l~~~~~~~~~~~~~~l~~~~~~  427 (437)
T PLN02693        349 DLLGQEAFVEAAPEMGSEDFSYFAETIPGHFSLLGMQDETNG-YASSHSPLYRINEDVLPYGAAIHATMAVQYLKEKASK  427 (437)
T ss_pred             HhcCCcceeecCCCceechHHHHHHHhhhhEEEEecCCCCCC-CCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            988876542234567999999999999999889998742101 1469999999999999999999999999999753332


Q ss_pred             CCCCCCCCCCCC
Q 013076          439 ISLPEGNYRDEL  450 (450)
Q Consensus       439 ~~~~~~~~~~~~  450 (450)
                      -+.  ...+||+
T Consensus       428 ~~~--~~~~~~~  437 (437)
T PLN02693        428 GSV--SGFHDEL  437 (437)
T ss_pred             CCC--CCCccCC
Confidence            222  6677775

>PLN02280 IAA-amino acid hydrolase Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>TIGR01891 amidohydrolases amidohydrolase Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] Back     alignment and domain information
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 [] Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only] Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism] Back     alignment and domain information
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2234 Iap Predicted aminopeptidases [General function prediction only] Back     alignment and domain information
>PRK00913 multifunctional aminopeptidase A; Provisional Back     alignment and domain information
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] Back     alignment and domain information
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains Back     alignment and domain information
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch Back     alignment and domain information
>PRK05015 aminopeptidase B; Provisional Back     alignment and domain information
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only] Back     alignment and domain information
>PTZ00412 leucyl aminopeptidase; Provisional Back     alignment and domain information
>PRK02256 putative aminopeptidase 1; Provisional Back     alignment and domain information
>PTZ00371 aspartyl aminopeptidase; Provisional Back     alignment and domain information
>PRK02813 putative aminopeptidase 2; Provisional Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query450
1xmb_A418 X-ray Structure Of Iaa-aminoacid Hydrolase From Ara 1e-153
1ysj_A404 Crystal Structure Of Bacillus Subtilis Yxep Protein 6e-74
4ewt_A392 The Crystal Structure Of A Putative Aminohydrolase 6e-55
3io1_A445 Crystal Structure Of Aminobenzoyl-Glutamate Utiliza 3e-16
3ram_A394 Crystal Structure Of Hmra Length = 394 2e-10
>pdb|1XMB|A Chain A, X-ray Structure Of Iaa-aminoacid Hydrolase From Arabidopsis Thaliana Gene At5g56660 Length = 418 Back     alignment and structure 
Iteration: 1

 Score =  538 bits (1385), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 257/395 (65%), Positives = 316/395 (80%), Gaps = 3/395 (0%)
Query: 40  IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVT 99
           I  KLL FAK  E+  WM+ IRRKIH+NPELGY+E ETS+LIRSEL+ +GIKY++PVA+T
Sbjct: 13  IQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAIT 72
Query: 100 GVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKIL 159
           GV+G+IGTGEPPFVALRADMD+LP+QE VEWE+KSKI GKMHACGHDGHVTMLLGAAKIL
Sbjct: 73  GVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKIL 132
Query: 160 QEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGP 219
            EHR  L+GTVVL+FQPAEEG  GA K+ E G L+ V AIFG+H+   +P G+ ASR G 
Sbjct: 133 HEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGS 192
Query: 220 LLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKF 279
            LAG+G FEAVI GKGGHAAIPQH+IDP++AAS++++SLQ LVSRE DPLDS+VVTV+K 
Sbjct: 193 FLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKV 252
Query: 280 QGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPF 339
            GG AFNVIPDS+ IGGT RAF+   FTQL+QR++EVI  QAAV RC+A+V+     +  
Sbjct: 253 NGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNLTPNGREP 310
Query: 340 FPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETL 399
            PPT+NN DL+K F+ V  D+L  +     APVMGSEDFS++ E +PG+F  LGM++ET 
Sbjct: 311 MPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDETN 370
Query: 400 GKVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434
           G   S HSP + +NED LPYGAA+HAS+A++YL E
Sbjct: 371 GYASS-HSPLYRINEDVLPYGAAIHASMAVQYLKE 404
>pdb|1YSJ|A Chain A, Crystal Structure Of Bacillus Subtilis Yxep Protein (Apc1829), A Dinuclear Metal Binding Peptidase From M20 Family Length = 404 Back     alignment and structure
>pdb|4EWT|A Chain A, The Crystal Structure Of A Putative Aminohydrolase From Methicillin Resistant Staphylococcus Aureus Length = 392 Back     alignment and structure
>pdb|3IO1|A Chain A, Crystal Structure Of Aminobenzoyl-Glutamate Utilization Protein From Klebsiella Pneumoniae Length = 445 Back     alignment and structure
>pdb|3RAM|A Chain A, Crystal Structure Of Hmra Length = 394 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query450
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 0.0
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 0.0
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 1e-159
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 1e-32
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 3e-20
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 4e-15
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 4e-12
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 8e-12
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 1e-11
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 2e-11
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 4e-11
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 9e-11
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 8e-09
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 2e-08
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 1e-06
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 2e-06
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 4e-06
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 4e-06
2qyv_A487 XAA-His dipeptidase; YP_718209.1, structural genom 6e-06
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 6e-04
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 7e-04
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 8e-04
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Length = 418 Back     alignment and structure
 Score =  640 bits (1654), Expect = 0.0
 Identities = 261/423 (61%), Positives = 325/423 (76%), Gaps = 5/423 (1%)

Query: 28  SYGSSSSNGLSDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDK 87
           S     +   S I  KLL FAK  E+  WM+ IRRKIH+NPELGY+E ETS+LIRSEL+ 
Sbjct: 1   SESPWIAEDTSQIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELEL 60

Query: 88  MGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDG 147
           +GIKY++PVA+TGV+G+IGTGEPPFVALRADMD+LP+QE VEWE+KSKI GKMHACGHDG
Sbjct: 61  IGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDG 120

Query: 148 HVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPN 207
           HVTMLLGAAKIL EHR  L+GTVVL+FQPAEEG  GA K+ E G L+ V AIFG+H+   
Sbjct: 121 HVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSAR 180

Query: 208 LPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREAD 267
           +P G+ ASR G  LAG+G FEAVI GKGGHAAIPQH+IDP++AAS++++SLQ LVSRE D
Sbjct: 181 IPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETD 240

Query: 268 PLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCS 327
           PLDS+VVTV+K  GG AFNVIPDS+ IGGT RAF+    TQL+QR++EVI  QAAV RC+
Sbjct: 241 PLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGF--TQLQQRVKEVITKQAAVHRCN 298

Query: 328 ATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPG 387
           A+V+     +   PPT+NN DL+K F+ V  D+L  +     APVMGSEDFS++ E +PG
Sbjct: 299 ASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPG 358

Query: 388 YFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFGPEISLPEGNYR 447
           +F  LGM++ET G   S HSP + +NED LPYGAA+HAS+A++YL E   + S+    + 
Sbjct: 359 HFSLLGMQDETNGYA-SSHSPLYRINEDVLPYGAAIHASMAVQYLKEKASKGSV--SGFH 415

Query: 448 DEL 450
           +EL
Sbjct: 416 EEL 418
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Length = 404 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Length = 445 Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Length = 394 Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Length = 393 Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Length = 433 Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Length = 396 Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Length = 369 Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Length = 356 Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Length = 373 Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Length = 364 Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Length = 434 Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Length = 417 Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Length = 490 Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Length = 369 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Length = 393 Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Length = 408 Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Length = 377 Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Length = 423 Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Length = 487 Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Length = 474 Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Length = 492 Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Length = 198 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query450
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 100.0
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 100.0
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 100.0
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 100.0
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 100.0
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 100.0
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 100.0
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 100.0
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 100.0
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 100.0
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 100.0
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 100.0
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 100.0
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 100.0
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 100.0
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 100.0
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 100.0
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 100.0
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 100.0
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 100.0
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 100.0
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 100.0
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 100.0
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 100.0
2qyv_A487 XAA-His dipeptidase; YP_718209.1, structural genom 100.0
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 100.0
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 100.0
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 100.0
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 100.0
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 99.94
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 99.94
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 99.92
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 99.91
2wzn_A354 TET3, 354AA long hypothetical operon protein FRV; 99.91
2gre_A349 Deblocking aminopeptidase; structural genomi prote 99.9
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 99.89
1vho_A346 Endoglucanase; structural genomics, unknown functi 99.88
3cpx_A321 Aminopeptidase, M42 family; YP_676701.1, putative 99.86
1ylo_A348 Hypothetical protein SF2450; structural genomics, 99.86
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 99.81
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 99.75
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 99.71
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 99.66
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 99.63
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 99.61
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 99.59
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 99.52
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 99.23
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 99.19
4f9u_A312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 99.15
1q7l_B88 Aminoacylase-1; catalysis, enzyme dimerization, si 99.11
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 99.1
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 99.03
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 98.69
3fed_A707 Glutamate carboxypeptidase III; metallopeptidase, 98.03
3kas_A640 Transferrin receptor protein 1; transferrin recept 97.99
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 94.64
3vat_A496 Dnpep, aspartyl aminopeptidase; alpha-beta-alpha s 94.33
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 93.86
3k9t_A435 Putative peptidase; structural genomics, joint cen 92.32
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 92.09
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 91.97
2hc9_A491 Leucine aminopeptidase 1; carbonate, structural ge 90.98
3h8g_F497 Cytosol aminopeptidase; hydrolase, manganese, meta 90.08
1gyt_A503 Cytosol aminopeptidase; hydrolase, DNA recombinati 89.81
3ij3_A482 Cytosol aminopeptidase; PEPB, peptidase M17 family 87.77
1lam_A484 Leucine aminopeptidase; exopeptidase, metallopepti 87.63
3jru_B490 Probable cytosol aminopeptidase; bacterial blight, 87.43
3kzw_A515 Cytosol aminopeptidase; hydrolase, manganese bindi 87.41
3kr4_A528 M17 leucyl aminopeptidase; protease, hydrolase; HE 87.17
3pei_A486 Cytosol aminopeptidase; structural genomics, cente 86.77
2glj_A461 Probable M18-family aminopeptidase 1; aminopeptida 86.48
4efd_A522 Aminopeptidase; structural genomics, structural ge 84.74
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 81.52
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 80.43
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
Probab=100.00  E-value=8.4e-63  Score=495.90  Aligned_cols=395  Identities=65%  Similarity=1.066  Sum_probs=320.1

Q ss_pred             hhHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeec
Q 013076           40 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADM  119 (450)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~  119 (450)
                      ..+++.+++++++.++++++++++|++|||+|++|.++++||.++|+++|++++...+.+|+++++++++.|+|+|+|||
T Consensus        13 ~~~~i~~~~~~~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH~   92 (418)
T 1xmb_A           13 IQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADM   92 (418)
T ss_dssp             ---CHHHHHHSHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEEC
T ss_pred             HHHHHHHHHHhhhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEecc
Confidence            34457777777422278999999999999999999999999999999999998875557899999976422899999999


Q ss_pred             cCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCccchHHHHHcccccccceE
Q 013076          120 DSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAI  199 (450)
Q Consensus       120 DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~~d~~  199 (450)
                      ||||+++...|||.++.||++||||+|++++++|+|+++|++.+.+++++|+|+|+++||++.|++++++++.++++|++
T Consensus        93 D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~~  172 (418)
T 1xmb_A           93 DALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAI  172 (418)
T ss_dssp             CCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEE
T ss_pred             cccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCEE
Confidence            99999887788999888999999999999999999999999988789999999999999977899999998876668999


Q ss_pred             EEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEE
Q 013076          200 FGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKF  279 (450)
Q Consensus       200 i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i  279 (450)
                      +++|.+++.|+|.+....+..++|..+++|+++|+++|+|.|+.|+|||..+++++.+|+.+..+..++...++++++.|
T Consensus       173 i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg~i  252 (418)
T 1xmb_A          173 FGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKV  252 (418)
T ss_dssp             EEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEEE
T ss_pred             EEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEE
Confidence            99887666677776556666788999999999999999999999999999999999999988655545555679999999


Q ss_pred             ecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHh
Q 013076          280 QGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGD  359 (450)
Q Consensus       280 ~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  359 (450)
                      +||.+.|+||++|++.+|+|+.|  +.+++.++|+++++..+..+++++++++.....+++|++.+|+++++.+++++++
T Consensus       253 ~gG~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~~~~~~~p~~~~~~d~~l~~~~~~~~~~  330 (418)
T 1xmb_A          253 NGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRD  330 (418)
T ss_dssp             C--------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEEESSGGGCCCBCCEEECHHHHHHHHHHHHH
T ss_pred             EecCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEEEEccCCcccCCCccCCHHHHHHHHHHHHH
Confidence            99999999999999999999999  8999999999999988878888888876211012367777899999999999999


Q ss_pred             hcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhhcCC
Q 013076          360 MLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFGP  437 (450)
Q Consensus       360 ~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~~~  437 (450)
                      ++|.+++..+...+|++|+++|.+.+|++++++|+.... +....+|++||+++++++.+++++|+.++.++++.++.
T Consensus       331 ~~g~~~~~~~~~~~g~tD~~~~~~~~P~~~~~~G~~~~~-~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~~~  407 (418)
T 1xmb_A          331 LLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKAS  407 (418)
T ss_dssp             HHCGGGEEECCCBCCCCTHHHHHTTSCEEEEEEEEECTT-CCSCCTTCTTCCCCGGGHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hcCCcceeccCCCCCcchHHHHHHHCCEEEEEEeCCCCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            778764322457889999999988899987778876421 22467999999999999999999999999999986555
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Back     alignment and structure
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum} Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Back     alignment and structure
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A Back     alignment and structure
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A* Back     alignment and structure
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 Back     alignment and structure
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} Back     alignment and structure
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A* Back     alignment and structure
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV} Back     alignment and structure
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} Back     alignment and structure
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A* Back     alignment and structure
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp} Back     alignment and structure
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Back     alignment and structure
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei} Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 450
d1xmba1273 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydro 2e-60
d1xmba1273 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydro 2e-20
d1ysja1261 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillu 4e-49
d1ysja1261 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillu 8e-15
d1xmba2119 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mo 2e-29
d1ysja2115 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subti 1e-18
d1lfwa2196 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactoba 1e-18
d1z2la2117 d.58.19.1 (A:213-329) Allantoate amidohydrolase Al 3e-18
d2grea2233 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid 9e-17
d1cg2a2113 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudom 4e-16
d1vgya2113 d.58.19.1 (A:181-293) Succinyl-diaminopimelate des 8e-16
d1r3na2116 d.58.19.1 (A:248-363) Peptidase-like beta-alanine 3e-11
d1vgya1262 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimel 5e-09
g1q7l.1280 c.56.5.4 (A:,B:) Aminoacylase-1, catalytic domain 2e-04
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: IAA-amino acid hydrolase, catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  196 bits (499), Expect = 2e-60
 Identities = 139/273 (50%), Positives = 175/273 (64%), Gaps = 5/273 (1%)

Query: 43  KLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVV 102
           KLL FAK  E+  WM+ IRRKIH+NPELGY+E ETS+LIRSEL+ +GIKY++PVA+TGV+
Sbjct: 1   KLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVI 60

Query: 103 GFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEH 162
           G+IGTGEPPFVALRADMD+LP+QE VEWE+KSKI GKMHACGHDGHVTMLLGAAKIL EH
Sbjct: 61  GYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEH 120

Query: 163 REELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLA 222
           R  L+GTVVL+FQPAEEG  GA K+ E G L+ V AIFG+H+   +P G+ ASR G  L 
Sbjct: 121 RHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLT 180

Query: 223 GSGFFEAVIGGKGGHAAIPQ---HSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKF 279
            +         K     + Q       P++ + +     +  +      L  Q  T    
Sbjct: 181 VNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAET-IPGHFSLLGMQDETNGYA 239

Query: 280 QGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQR 312
                   I + VL  G     +  +   LK++
Sbjct: 240 SSHSPLYRINEDVLPYGA-AIHASMAVQYLKEK 271
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 273 Back     information, alignment and structure
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 261 Back     information, alignment and structure
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 261 Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119 Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 115 Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Length = 196 Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Length = 117 Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Length = 113 Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Length = 113 Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 116 Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Length = 262 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query450
d1xmba1273 IAA-amino acid hydrolase, catalytic domain {Mouse- 100.0
d1ysja1261 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 100.0
d1vgya1262 Succinyl-diaminopimelate desuccinylase, catalytic 99.97
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 99.97
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 99.94
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.91
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 99.91
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 99.88
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 99.87
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.86
d1ysja2115 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 99.86
d1xmba2119 IAA-amino acid hydrolase {Mouse-ear cress (Arabido 99.85
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.83
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 99.83
d1vgya2113 Succinyl-diaminopimelate desuccinylase {Neisseria 99.79
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 99.78
d1cg2a2113 Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 99.77
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 99.77
d1z2la2117 Allantoate amidohydrolase AllC {Escherichia coli [ 99.68
d1r3na2116 Peptidase-like beta-alanine synthase {Yeast (Sacch 99.52
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 99.48
d1lfwa2196 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.38
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 99.37
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 99.15
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 99.05
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 98.99
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 98.15
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 98.1
d1fnoa3113 Peptidase T (tripeptidase) {Salmonella typhimurium 97.88
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 92.56
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 92.15
d1lama1325 Leucine aminopeptidase, C-terminal domain {Cow (Bo 90.27
d1gyta2325 Leucine aminopeptidase, C-terminal domain {Escheri 88.07
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: IAA-amino acid hydrolase, catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.1e-37  Score=283.85  Aligned_cols=269  Identities=64%  Similarity=1.069  Sum_probs=205.6

Q ss_pred             HHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCCC
Q 013076           45 LNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPL  124 (450)
Q Consensus        45 ~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~  124 (450)
                      +++.+..++.++++++.|+|+++|+++++|.++++||.++|+++||+++...+.++++|.++++++|+|+|.++||.+|.
T Consensus         3 ~~~~~~~e~~~~li~~rr~lh~~PEl~~~E~~T~~~i~~~L~~~g~~~~~~~~~tg~~a~~~~~~~~~i~~rad~Dalp~   82 (273)
T d1xmba1           3 LEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPI   82 (273)
T ss_dssp             -------------------HHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEECCCBSC
T ss_pred             hhhhhChHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHHCCCeEEecCCceEEEEEECCCcceEEEEecccccccc
Confidence            33444444558999999999999999999999999999999999999987667789999998777799999999999999


Q ss_pred             cCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCccchHHHHHcccccccceEEEecc
Q 013076          125 QEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHV  204 (450)
Q Consensus       125 ~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~~d~~i~~~~  204 (450)
                      .+...|+|.+..+|++|+||++++++++|++++.|++...+++++|+|+|+|+||++.|++.|+++|.++++|+++++|+
T Consensus        83 ~e~~~~~~~s~~~g~~HaCGHd~h~a~~l~aa~~l~~~~~~~~g~v~~ifqPaEE~~~Ga~~mi~~G~~~~vd~~~~~H~  162 (273)
T d1xmba1          83 QEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHL  162 (273)
T ss_dssp             CCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEEEEEEE
T ss_pred             ccccCcccccCCCCcccccccchHHHHHHHHHHHHHHhhhcCCCeEEEEEecccccccchhHHHHcCCcCCCCeeEEEee
Confidence            99899999999999999999999999999999999998878999999999999998889999999999999999999999


Q ss_pred             CCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCC
Q 013076          205 DPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGA  284 (450)
Q Consensus       205 ~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~  284 (450)
                      +|..|.|.+.++.|.     ..   .                                                      
T Consensus       163 ~~~~~~G~i~~~~G~-----~m---a------------------------------------------------------  180 (273)
T d1xmba1         163 SARIPFGKAASRAGS-----FL---T------------------------------------------------------  180 (273)
T ss_dssp             EEEEETTCEEECSEE-----EE---E------------------------------------------------------
T ss_pred             cCCCCcchhhcccch-----hh---h------------------------------------------------------
Confidence            988888887665431     11   0                                                      


Q ss_pred             CCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCc
Q 013076          285 FNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQ  364 (450)
Q Consensus       285 ~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~  364 (450)
                                                                                 .+|...++.+.++....+|.+
T Consensus       181 -----------------------------------------------------------~nd~~~~~~~~~~a~~~~G~~  201 (273)
T d1xmba1         181 -----------------------------------------------------------VNNKDLYKQFKKVVRDLLGQE  201 (273)
T ss_dssp             -----------------------------------------------------------------------------ECG
T ss_pred             -----------------------------------------------------------hhhhHhHHHHHHHHHHHhccc
Confidence                                                                       001111222233333444554


Q ss_pred             cccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhhc
Q 013076          365 KVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEF  435 (450)
Q Consensus       365 ~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~  435 (450)
                      .+....+..|+.|+++|.+.+|.+++.+|......| ....|+|...++.+.|..++++++.++.++|+++
T Consensus       202 av~~~~P~mgsEDFs~~~~~vPg~~~~lG~~~~~~g-~~~~Hsp~F~idE~aL~~Gv~~~~~~Al~~L~e~  271 (273)
T d1xmba1         202 AFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDETNG-YASSHSPLYRINEDVLPYGAAIHASMAVQYLKEK  271 (273)
T ss_dssp             GEEECCCBCCCCTHHHHHTTSCEEEEEEEEECTTCC-SCCTTCTTCCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCchhhHHHHHHHHHhCCceEEEEccccCCCC-CcCCCCCCccCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            443445688999999999999999988887754322 3568999999999999999999999999999864
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
>d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]} Back     information, alignment and structure