Citrus Sinensis ID: 013199
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 448 | ||||||
| 15226282 | 567 | O-fucosyltransferase family protein [Ara | 0.986 | 0.779 | 0.825 | 0.0 | |
| 224111498 | 569 | predicted protein [Populus trichocarpa] | 0.988 | 0.778 | 0.817 | 0.0 | |
| 224099495 | 569 | predicted protein [Populus trichocarpa] | 0.988 | 0.778 | 0.819 | 0.0 | |
| 297814382 | 567 | hypothetical protein ARALYDRAFT_484066 [ | 0.977 | 0.772 | 0.794 | 0.0 | |
| 225424244 | 561 | PREDICTED: DUF246 domain-containing prot | 0.919 | 0.734 | 0.849 | 0.0 | |
| 147801555 | 575 | hypothetical protein VITISV_036881 [Viti | 0.919 | 0.716 | 0.849 | 0.0 | |
| 255570136 | 570 | conserved hypothetical protein [Ricinus | 0.986 | 0.775 | 0.821 | 0.0 | |
| 449465763 | 563 | PREDICTED: DUF246 domain-containing prot | 0.939 | 0.747 | 0.817 | 0.0 | |
| 356521550 | 564 | PREDICTED: DUF246 domain-containing prot | 0.941 | 0.748 | 0.815 | 0.0 | |
| 356575943 | 564 | PREDICTED: DUF246 domain-containing prot | 0.941 | 0.748 | 0.799 | 0.0 |
| >gi|15226282|ref|NP_178257.1| O-fucosyltransferase family protein [Arabidopsis thaliana] gi|3785977|gb|AAC67324.1| similar to axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gi|20260420|gb|AAM13108.1| similar to axi 1 protein [Arabidopsis thaliana] gi|22136280|gb|AAM91218.1| similar to axi 1 protein [Arabidopsis thaliana] gi|110742513|dbj|BAE99174.1| similar to axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gi|330250365|gb|AEC05459.1| O-fucosyltransferase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/446 (82%), Positives = 405/446 (90%), Gaps = 4/446 (0%)
Query: 4 NRLPSSGHTTPSPPASPRRSPRYRHGRGKP--GGRFTPVGPPGRANLAHRLAWLFLSVLL 61
NRLP SGHTTPSPPASPRRSPRYRHGR K G RF V P LAHRL+W+ LSVLL
Sbjct: 5 NRLPGSGHTTPSPPASPRRSPRYRHGRSKAAAGSRFPTVQP--SRTLAHRLSWILLSVLL 62
Query: 62 RRQGIFLFAPLIYISGMLLYMGTVSFDVVPVIKHRPAPGSVYRSPQVYAKLKPEMDADNS 121
RRQGIFLFAPLIYIS MLLYMGTVSFDVVP+I+ RP PGSVY+SPQVYAKL+PEMDADNS
Sbjct: 63 RRQGIFLFAPLIYISCMLLYMGTVSFDVVPIIQRRPPPGSVYKSPQVYAKLRPEMDADNS 122
Query: 122 SSDAISTIWKASHKGVEWKPCVKRSSGELPESNGYISVEANGGLNQQRISICNAVAVAGY 181
++DAI+TIWK S+KG EWKP V +S+G+LPESNGYI VEANGGLNQQR SICNAVAVAGY
Sbjct: 123 TADAITTIWKHSYKGGEWKPYVNKSTGDLPESNGYIYVEANGGLNQQRTSICNAVAVAGY 182
Query: 182 LNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFDHNMSNV 241
LNATLVIPNFHYHSIWRDPSKF DIYDE++F S L NDVRVV+ IPEY+MERFDHNM+NV
Sbjct: 183 LNATLVIPNFHYHSIWRDPSKFGDIYDEEFFVSTLSNDVRVVDTIPEYLMERFDHNMTNV 242
Query: 242 YNFRVKAWSPIQFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRLRCLANYEALRFS 301
YNFRVKAWSPIQ+Y+D +LPKLLEE++IRISPFANRLSFDAP AVQRLRCLANYEAL+FS
Sbjct: 243 YNFRVKAWSPIQYYRDSILPKLLEEKIIRISPFANRLSFDAPQAVQRLRCLANYEALKFS 302
Query: 302 SPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGEREKEDMKEARER 361
ILT+GETLV RMKE+S NHG KY+SVHLRFEEDMVAFSCC+FDGG +EK+DM ARER
Sbjct: 303 KTILTLGETLVKRMKEQSANHGAKYVSVHLRFEEDMVAFSCCIFDGGNQEKQDMIAARER 362
Query: 362 GWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTM 421
GWKGKFTKPGRVIRPGAIR NGKCPLTPLEVGLMLRGMGF+K+TYIFLASG+IY+A +TM
Sbjct: 363 GWKGKFTKPGRVIRPGAIRQNGKCPLTPLEVGLMLRGMGFNKSTYIFLASGEIYDANRTM 422
Query: 422 APLIEMFPNLQTKEMLASEEELAPFK 447
APL+EMFPNLQTKEMLASEEELAP+K
Sbjct: 423 APLLEMFPNLQTKEMLASEEELAPYK 448
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224111498|ref|XP_002315879.1| predicted protein [Populus trichocarpa] gi|222864919|gb|EEF02050.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224099495|ref|XP_002311505.1| predicted protein [Populus trichocarpa] gi|222851325|gb|EEE88872.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|297814382|ref|XP_002875074.1| hypothetical protein ARALYDRAFT_484066 [Arabidopsis lyrata subsp. lyrata] gi|297320912|gb|EFH51333.1| hypothetical protein ARALYDRAFT_484066 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|225424244|ref|XP_002284457.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis vinifera] gi|297737694|emb|CBI26895.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147801555|emb|CAN77011.1| hypothetical protein VITISV_036881 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255570136|ref|XP_002526030.1| conserved hypothetical protein [Ricinus communis] gi|223534677|gb|EEF36370.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449465763|ref|XP_004150597.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] gi|449514634|ref|XP_004164435.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356521550|ref|XP_003529417.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356575943|ref|XP_003556095.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 448 | ||||||
| TAIR|locus:2049527 | 567 | AT2G01480 [Arabidopsis thalian | 0.986 | 0.779 | 0.800 | 3e-195 | |
| TAIR|locus:2006852 | 562 | AT1G14970 [Arabidopsis thalian | 0.975 | 0.777 | 0.727 | 3.2e-175 | |
| TAIR|locus:2014666 | 568 | AT1G35510 [Arabidopsis thalian | 0.926 | 0.730 | 0.555 | 1.7e-123 | |
| TAIR|locus:504956200 | 589 | AT1G38131 [Arabidopsis thalian | 0.904 | 0.687 | 0.542 | 2.8e-114 | |
| TAIR|locus:1005716710 | 470 | AT1G38065 "AT1G38065" [Arabido | 0.671 | 0.640 | 0.621 | 7.9e-101 | |
| TAIR|locus:2029984 | 611 | AT1G29200 [Arabidopsis thalian | 0.482 | 0.353 | 0.408 | 3.7e-70 | |
| TAIR|locus:2079281 | 557 | AT3G26370 [Arabidopsis thalian | 0.680 | 0.547 | 0.448 | 5.6e-68 | |
| TAIR|locus:2130938 | 549 | AT4G16650 [Arabidopsis thalian | 0.808 | 0.659 | 0.402 | 4.5e-66 | |
| TAIR|locus:2168297 | 504 | AT5G65470 [Arabidopsis thalian | 0.495 | 0.440 | 0.399 | 4.8e-62 | |
| TAIR|locus:2027129 | 652 | AT1G62330 [Arabidopsis thalian | 0.430 | 0.296 | 0.404 | 2.1e-61 |
| TAIR|locus:2049527 AT2G01480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1891 (670.7 bits), Expect = 3.0e-195, P = 3.0e-195
Identities = 357/446 (80%), Positives = 394/446 (88%)
Query: 4 NRLPSSGHTTXXXXXXXXXXXXYRHGRGKP--GGRFTPVGPPGRANLAHRLAWLFLSVLL 61
NRLP SGHTT YRHGR K G RF P P R LAHRL+W+ LSVLL
Sbjct: 5 NRLPGSGHTTPSPPASPRRSPRYRHGRSKAAAGSRF-PTVQPSRT-LAHRLSWILLSVLL 62
Query: 62 RRQGIFLFAPLIYISGMLLYMGTVSFDVVPVIKHRPAPGSVYRSPQVYAKLKPEMDADNS 121
RRQGIFLFAPLIYIS MLLYMGTVSFDVVP+I+ RP PGSVY+SPQVYAKL+PEMDADNS
Sbjct: 63 RRQGIFLFAPLIYISCMLLYMGTVSFDVVPIIQRRPPPGSVYKSPQVYAKLRPEMDADNS 122
Query: 122 SSDAISTIWKASHKGVEWKPCVKRSSGELPESNGYISVEANGGLNQQRISICNAVAVAGY 181
++DAI+TIWK S+KG EWKP V +S+G+LPESNGYI VEANGGLNQQR SICNAVAVAGY
Sbjct: 123 TADAITTIWKHSYKGGEWKPYVNKSTGDLPESNGYIYVEANGGLNQQRTSICNAVAVAGY 182
Query: 182 LNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFDHNMSNV 241
LNATLVIPNFHYHSIWRDPSKF DIYDE++F S L NDVRVV+ IPEY+MERFDHNM+NV
Sbjct: 183 LNATLVIPNFHYHSIWRDPSKFGDIYDEEFFVSTLSNDVRVVDTIPEYLMERFDHNMTNV 242
Query: 242 YNFRVKAWSPIQFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRLRCLANYEALRFS 301
YNFRVKAWSPIQ+Y+D +LPKLLEE++IRISPFANRLSFDAP AVQRLRCLANYEAL+FS
Sbjct: 243 YNFRVKAWSPIQYYRDSILPKLLEEKIIRISPFANRLSFDAPQAVQRLRCLANYEALKFS 302
Query: 302 SPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGEREKEDMKEARER 361
ILT+GETLV RMKE+S NHG KY+SVHLRFEEDMVAFSCC+FDGG +EK+DM ARER
Sbjct: 303 KTILTLGETLVKRMKEQSANHGAKYVSVHLRFEEDMVAFSCCIFDGGNQEKQDMIAARER 362
Query: 362 GWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTM 421
GWKGKFTKPGRVIRPGAIR NGKCPLTPLEVGLMLRGMGF+K+TYIFLASG+IY+A +TM
Sbjct: 363 GWKGKFTKPGRVIRPGAIRQNGKCPLTPLEVGLMLRGMGFNKSTYIFLASGEIYDANRTM 422
Query: 422 APLIEMFPNLQTKEMLASEEELAPFK 447
APL+EMFPNLQTKEMLASEEELAP+K
Sbjct: 423 APLLEMFPNLQTKEMLASEEELAPYK 448
|
|
| TAIR|locus:2006852 AT1G14970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2014666 AT1G35510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:504956200 AT1G38131 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:1005716710 AT1G38065 "AT1G38065" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2029984 AT1G29200 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2079281 AT3G26370 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2168297 AT5G65470 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2027129 AT1G62330 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 448 | |||
| cd11299 | 290 | cd11299, O-FucT_plant, GDP-fucose protein O-fucosy | 1e-127 | |
| pfam10250 | 315 | pfam10250, O-FucT, GDP-fucose protein O-fucosyltra | 5e-97 | |
| cd11296 | 206 | cd11296, O-FucT_like, GDP-fucose protein O-fucosyl | 3e-04 |
| >gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily | Back alignment and domain information |
|---|
Score = 369 bits (950), Expect = e-127
Identities = 133/293 (45%), Positives = 177/293 (60%), Gaps = 48/293 (16%)
Query: 156 YISVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSV 215
Y+ V ANGGLNQQR IC+AVAVA LNATLV+P +S+W D SKF DIYD D+F
Sbjct: 1 YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60
Query: 216 LQNDVRVVNKIPEYIMERFDHNMSNVYNFRVKAWSPIQFYKDEVLPKLLEERLIRISPFA 275
L++DVRVV K+PE + + + RV + S +Y +EVLP L + +IR++PF
Sbjct: 61 LKDDVRVVKKLPEELASKKPE----ITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFD 116
Query: 276 NRLSFDA-PPAVQRLRCLANYEALRFSSPILTMGETLVARMKERSVNHGGKYISVHLRFE 334
+RL+ D PP +QRLRC N+ ALRF I +G+ LV R++E GG ++++HLRFE
Sbjct: 117 SRLANDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLRE----AGGPFLALHLRFE 172
Query: 335 EDMVAFSCCVFDGGEREKEDMKEARERGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGL 394
+DM+AFS C GKCPLTP EVGL
Sbjct: 173 KDMLAFSGC---------------------------------------GKCPLTPEEVGL 193
Query: 395 MLRGMGFDKNTYIFLASGKIYNAEKTMAPLIEMFPNLQTKEMLASEEELAPFK 447
+LR +GF ++T I+LA+G+IY E+ + PL +FPNL TKE LA+ EELAPF
Sbjct: 194 LLRALGFPRSTRIYLAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELAPFS 246
|
Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290 |
| >gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 448 | |||
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 100.0 | |
| KOG3849 | 386 | consensus GDP-fucose protein O-fucosyltransferase | 95.51 |
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-48 Score=379.52 Aligned_cols=262 Identities=37% Similarity=0.626 Sum_probs=175.8
Q ss_pred ecCchhHHHHHHHHHHHHHHHhcceEEeccccccccccCCCC-----CCcccChHHHHHhccccceeeccCchhHHHhhc
Q 013199 161 ANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPSK-----FRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFD 235 (448)
Q Consensus 161 ~nGGLNQqR~~IcDAVaVAriLNATLVlP~l~~~s~W~D~S~-----F~DIfDvdhFI~sL~~dVrIVk~LP~~~~~~~~ 235 (448)
|.||+||||.++++||++|++||+|||||.+.....|+|.++ |+|+||++||+++++++|.+.+.+|........
T Consensus 6 ~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~ 85 (351)
T PF10250_consen 6 CMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFR 85 (351)
T ss_dssp -SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccc
Confidence 899999999999999999999999999999999999999988 999999999999999999999999876654221
Q ss_pred ccC-------------------------Ccceeccccc-CCChhhHHhhcccccccc------ceEEecCCCccccCC-C
Q 013199 236 HNM-------------------------SNVYNFRVKA-WSPIQFYKDEVLPKLLEE------RLIRISPFANRLSFD-A 282 (448)
Q Consensus 236 ~~~-------------------------~~~~~~~v~~-~s~~~yY~~~vlP~l~k~------~VI~l~~f~~RLa~~-l 282 (448)
... .....+.... |+.+.+|.++++|.+.++ +++.|.++..++.++ .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 165 (351)
T PF10250_consen 86 LQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYL 165 (351)
T ss_dssp EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GG
T ss_pred hhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhccc
Confidence 100 0112223333 889999999999999886 999999999999876 7
Q ss_pred CchhhhhhhhhcccccccchhHHHHHHHHHHHHhhccccCCCceEEEeecchhhhHhhcccccCCchhHHHHHHHHHHhc
Q 013199 283 PPAVQRLRCLANYEALRFSSPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGEREKEDMKEARERG 362 (448)
Q Consensus 283 P~~iQrLRCrvnf~ALrF~p~I~~lg~~LV~Rmr~~s~~s~g~yiALHLRfE~DMlAfsgC~~~g~~~E~~eL~~~R~~~ 362 (448)
+.++|| +|+|+++|+++|++++++|+. .+++|||+|||+|+|| +++|.+++ ++..|..+|...
T Consensus 166 ~~~~~r--------~l~~~~~i~~~a~~~i~~~~~----~~~~yiavHlR~~~D~--~~~C~~~~---~~~~~~~~~~~~ 228 (351)
T PF10250_consen 166 DRDLQR--------YLRFSPEIRELADKFIKRLLA----GGGPYIAVHLRRGKDW--FSACEFKG---ERHLLASPRCWG 228 (351)
T ss_dssp GGGGGG--------G--B-HHHHHHHHHHHHHH--------SSEEEEEE--SHHH--HHHHCT-T-------TTTHHHH-
T ss_pred CccceE--------EEecCHHHHHHHHHHHHHhhc----ccCceEEEeecccCch--HhhcccCC---chHHHHHhHhhc
Confidence 888887 999999999999999999992 3689999999999999 99999955 777888877551
Q ss_pred cccccCCCCcccCchhhhcCCCCCCChHHHHHHHHhcCCCCCceEEEeeccccCccccchhHHHhCCCccccccCCCccc
Q 013199 363 WKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTMAPLIEMFPNLQTKEMLASEEE 442 (448)
Q Consensus 363 wk~k~~~~~~~i~~~~~R~~G~CPLTPeEvgl~LraLGf~~~T~IYlA~geiyGg~~~m~pL~~~FPnl~tKetLas~eE 442 (448)
. ..+++.+.+..|.||++|++++.+++++|+.+.|.||||++++|||++.|++|+++||++++|+++.+.+|
T Consensus 229 --~------~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 300 (351)
T PF10250_consen 229 --K------KSINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEE 300 (351)
T ss_dssp --G------GGTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--
T ss_pred --c------ccccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHH
Confidence 1 14677788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 013199 443 LAPFK 447 (448)
Q Consensus 443 L~pF~ 447 (448)
+++|.
T Consensus 301 ~~~~~ 305 (351)
T PF10250_consen 301 LEPLN 305 (351)
T ss_dssp S----
T ss_pred hhhcc
Confidence 98764
|
Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A. |
| >KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 448 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 2e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 1e-07
Identities = 62/434 (14%), Positives = 124/434 (28%), Gaps = 134/434 (30%)
Query: 40 VGPPGRANLAHRLAWL-----------FLSVLLRRQGIFLFAPLIYIS-----GMLLYMG 83
+ + RL W F+ +LR FL +P+ +Y+
Sbjct: 55 IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE 114
Query: 84 TVS--FDVVPVIKHRPAPGSVYRSPQVYAKLKPEMDADNSSSDAISTIWKASHKGVEWKP 141
++ V A +V R Q Y KL+ A+
Sbjct: 115 QRDRLYNDNQVF----AKYNVSR-LQPYLKLR----------QALL-------------- 145
Query: 142 CVKRSSGELPESNGYISVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPS 201
EL + ++ G + + V + W
Sbjct: 146 -------EL-RPAKNVLIDGVLGSGKT-------WVALDVCLSYKVQCKMDFKIFW---L 187
Query: 202 KFRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFDHNMSNVYNFRVKAWSPIQFYKDEVLP 261
++ + +VL+ ++++ + + + R S I+ +
Sbjct: 188 NLKNCNSPE---TVLE------------MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 262 KLLEERLIRISPFANRLSF--DAPPAVQRLRCLANYEALRFSSPILTMGETLVARMKERS 319
+L RL++ P+ N L + VQ + A S IL L R +
Sbjct: 233 EL--RRLLKSKPYENCLLVLLN----VQNAKAW---NAFNLSCKIL-----LTTR--FKQ 276
Query: 320 V-NHGGKYISVHLRFEEDMVAFSCCVFDGGEREKEDM--KEARERGWKGKFTKPGRVIRP 376
V + + H+ + + + E + + K + +P +
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLT-------PDEVKSLLLK------YLD--CRPQD-LPR 320
Query: 377 GAIRINGKCPLTPLEVGL---MLRGMGFDKNTYIFLASGKIYNAEKTMAPLIEMFPN-LQ 432
+ N P + + +R T+ K N +K + +IE N L+
Sbjct: 321 EVLTTN------PRRLSIIAESIRDG---LATWDNW---KHVNCDK-LTTIIESSLNVLE 367
Query: 433 TKEMLASEEELAPF 446
E + L+ F
Sbjct: 368 PAEYRKMFDRLSVF 381
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Length = 362 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 448 | |||
| 4ap5_A | 408 | GDP-fucose protein O-fucosyltransferase 2; GT-B, G | 98.76 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 97.15 | |
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 89.97 |
| >4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=1.7e-07 Score=94.61 Aligned_cols=70 Identities=20% Similarity=0.409 Sum_probs=55.2
Q ss_pred CCCCceEEEEec-C-chhHHHHHHHHHHHHHHHhcce----EEeccccccccccCCC------CCCcccChHHHHHhccc
Q 013199 151 PESNGYISVEAN-G-GLNQQRISICNAVAVAGYLNAT----LVIPNFHYHSIWRDPS------KFRDIYDEDYFTSVLQN 218 (448)
Q Consensus 151 ~~snGYL~V~~n-G-GLNQqR~~IcDAVaVAriLNAT----LVlP~l~~~s~W~D~S------~F~DIfDvdhFI~sL~~ 218 (448)
...++||+-..| | |.|.||...-.|.++|+.||.| ||||-...---|+-.+ .|++.||++++ +.
T Consensus 19 ~~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~~ 94 (408)
T 4ap5_A 19 ASRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----NK 94 (408)
T ss_dssp -CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----HT
T ss_pred ccccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----Hh
Confidence 357899999875 4 8999999999999999999999 9999665434455322 49999999865 45
Q ss_pred cceeec
Q 013199 219 DVRVVN 224 (448)
Q Consensus 219 dVrIVk 224 (448)
.|+||.
T Consensus 95 ~vpVI~ 100 (408)
T 4ap5_A 95 NIPVIE 100 (408)
T ss_dssp TSCEEE
T ss_pred hCCeeE
Confidence 667764
|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00