Citrus Sinensis ID: 013344
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 445 | 2.2.26 [Sep-21-2011] | |||||||
| Q56WD9 | 462 | 3-ketoacyl-CoA thiolase 2 | yes | no | 0.995 | 0.958 | 0.856 | 0.0 | |
| Q8LF48 | 443 | 3-ketoacyl-CoA thiolase 1 | no | no | 0.957 | 0.961 | 0.809 | 0.0 | |
| Q570C8 | 457 | 3-ketoacyl-CoA thiolase 5 | no | no | 0.961 | 0.936 | 0.693 | 0.0 | |
| Q921H8 | 424 | 3-ketoacyl-CoA thiolase A | yes | no | 0.901 | 0.945 | 0.547 | 1e-124 | |
| P07871 | 424 | 3-ketoacyl-CoA thiolase B | yes | no | 0.905 | 0.950 | 0.547 | 1e-124 | |
| Q8VCH0 | 424 | 3-ketoacyl-CoA thiolase B | yes | no | 0.901 | 0.945 | 0.547 | 1e-124 | |
| P21775 | 424 | 3-ketoacyl-CoA thiolase A | yes | no | 0.901 | 0.945 | 0.544 | 1e-123 | |
| P09110 | 424 | 3-ketoacyl-CoA thiolase, | yes | no | 0.903 | 0.948 | 0.539 | 1e-123 | |
| Q05493 | 414 | 3-ketoacyl-CoA thiolase, | yes | no | 0.831 | 0.893 | 0.535 | 1e-100 | |
| P33291 | 408 | 3-ketoacyl-CoA thiolase B | N/A | no | 0.817 | 0.892 | 0.468 | 1e-92 |
| >sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/460 (85%), Positives = 420/460 (91%), Gaps = 17/460 (3%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAI RQ+VLLEHLRPS+SSSHNYE+ LSASAC AGDSAAY RTS+YGDDVVIVAA+RT
Sbjct: 1 MEKAIERQRVLLEHLRPSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRT 60
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
LCKSKRG FKDTYPDDLLAPVL+A+IEKTN++PSEVGDIVVGTVLAPGSQRASECRMAA
Sbjct: 61 PLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAA 120
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVN 163
FYAGFPETV VRTVNRQCSSGLQAVADVAAAIKAGFYDIG SVN
Sbjct: 121 FYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVN 180
Query: 164 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 223
P VK F QAQNCLLPMGVTSENVA RFGV+R+EQDQAAVDSHRKAAAATAAGKFKDEIIP
Sbjct: 181 PAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
Query: 224 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283
V TK+VDPKTGDEKP+T+SVDDGIRP T+++ L KLKPVFKKDGTTTAGNSSQVSDGAGA
Sbjct: 241 VKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGA 300
Query: 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343
VLLMKRSVAM+KGLP+LGVFRTFAAVGVDPAIMG+GPAVAIPAAVK+AGL+LDDIDLFEI
Sbjct: 301 VLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEI 360
Query: 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 403
NEAFASQFVYCRNKLGLDPEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 361 NEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFG 420
Query: 404 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 443
V+SMCIGTGMGAAAVFERGD DEL N RKVE+ LSKD
Sbjct: 421 VVSMCIGTGMGAAAVFERGDGVDELRNARKVEAQGLLSKD 460
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Involved in long chain fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Confers sensitivity to 2,4-dichlorophenoxybutiric acid (2,4-DB). Required for local and systemic induction of jasmonic acid (JA) biosynthesis after wounding. Seems to be involved in JA biosynthesis during senescence. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 6 |
| >sp|Q8LF48|THIK1_ARATH 3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/451 (80%), Positives = 402/451 (89%), Gaps = 25/451 (5%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKA RQ++LL HL+PS+SS + LSASAC + DSAAY YGDDVVIVAA RT
Sbjct: 1 MEKATERQRILLRHLQPSSSSD----ASLSASACLSKDSAAYQ----YGDDVVIVAAQRT 52
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
ALCK+KRG FKDT+PD+LLA VL+A+IEKTNV+PSEVGDIVVGTVL PGSQRASECRMAA
Sbjct: 53 ALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPGSQRASECRMAA 112
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVN 163
FYAGFPETVP+RTVNRQCSSGLQAVADVAAAIKAGFYDIG SVN
Sbjct: 113 FYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPRGWKGSVN 172
Query: 164 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 223
P VK FEQA NCLLPMG+TSENVAHRF V+R+EQDQAAVDSHRKAA+ATA+GKFKDEI P
Sbjct: 173 PNVKKFEQAHNCLLPMGITSENVAHRFNVSREEQDQAAVDSHRKAASATASGKFKDEITP 232
Query: 224 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283
V TKIVDPKTGDEKP+T+SVDDGIRPNT++S LAKLKPVFK+DGTTTAGNSSQ+SDGAGA
Sbjct: 233 VKTKIVDPKTGDEKPITVSVDDGIRPNTTLSGLAKLKPVFKEDGTTTAGNSSQLSDGAGA 292
Query: 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343
VLLM+R+VAM+KGLPILGVFRTF+AVGVDPAIMGVGPAVAIPAAVK+AGL+L+D+DLFEI
Sbjct: 293 VLLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEI 352
Query: 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 403
NEAFASQFVYCRNKLGLD EKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 353 NEAFASQFVYCRNKLGLDAEKINVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFG 412
Query: 404 VISMCIGTGMGAAAVFERGDCADELCNVRKV 434
V+SMCIG+GMGAAAVFERG DELC+VRKV
Sbjct: 413 VVSMCIGSGMGAAAVFERGGGVDELCDVRKV 443
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Involved in fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Implicated in jasmonic acid (JA) biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q570C8|THIK5_ARATH 3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/454 (69%), Positives = 378/454 (83%), Gaps = 26/454 (5%)
Query: 1 MEKAINRQQVLLEHLRP---SNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAA 57
ME+A+ RQ++LL HL P SNSS + S+LS C + S + +GDD+VIVAA
Sbjct: 1 MERAMERQKILLRHLNPVSSSNSSLKHEPSLLSPVNCVSEVSP----MAAFGDDIVIVAA 56
Query: 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECR 117
YRTA+CK++RGGFKDT PDDLLA VLKAV+E+T++DPSEVGDIVVGTV+APGSQRA ECR
Sbjct: 57 YRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPGSQRAMECR 116
Query: 118 MAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG----------------- 160
+AA++AGFP++VPVRTVNRQCSSGLQAVADVAA+I+AG+YDIG
Sbjct: 117 VAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMSTDHIPGGG 176
Query: 161 --SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFK 218
NP+ + F +A++CLLPMG+TSENVA RFGVTR+EQD AAV+SH++AAAA A+GK K
Sbjct: 177 FHGSNPRAQDFPKARDCLLPMGITSENVAERFGVTREEQDMAAVESHKRAAAAIASGKLK 236
Query: 219 DEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVS 278
DEIIPVATKIVDP+T EK + +SVDDG+RPN+++++LAKLK VFK++G+TTAGN+SQ+S
Sbjct: 237 DEIIPVATKIVDPETKAEKAIVVSVDDGVRPNSNMADLAKLKTVFKQNGSTTAGNASQIS 296
Query: 279 DGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDI 338
DGAGAVLLMKRS+AM+KGLPILGVFR+FA GV+P++MG+GPAVAIPAA K AGL + DI
Sbjct: 297 DGAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMGIGPAVAIPAATKLAGLNVSDI 356
Query: 339 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR 398
DLFEINEAFASQ+VY KL LD EK+NVNGGA+AIGHPLG TGARCVATLLHEMKRRG+
Sbjct: 357 DLFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGHPLGATGARCVATLLHEMKRRGK 416
Query: 399 DCRFGVISMCIGTGMGAAAVFERGDCADELCNVR 432
DCRFGVISMCIGTGMGAAAVFERGD D L N R
Sbjct: 417 DCRFGVISMCIGTGMGAAAVFERGDSVDNLSNAR 450
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Probably involved in long chain fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Involved in systemic jasmonic acid (JA) biosynthesis after wounding and may be during senescence. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q921H8|THIKA_MOUSE 3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/435 (54%), Positives = 313/435 (71%), Gaps = 34/435 (7%)
Query: 5 INRQQVLLEHL--RPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTAL 62
++R QV+L HL RP +SS+ L A+ C SA + + S DVV+V RT +
Sbjct: 1 MHRLQVVLGHLAGRPESSSA------LQAAPC----SARFPQASA--SDVVVVHGRRTPI 48
Query: 63 CKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFY 122
++ RGGFK+T PD+LL+ VL AV++ + P ++GDI VG VL PG+ A R+A F
Sbjct: 49 GRASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAG-AVMARIAQFL 107
Query: 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVNPK 165
+G PETVP+ TVNRQCSSGLQAVA++A I+ G YDIG +++ +
Sbjct: 108 SGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSGMGNPGNISSR 167
Query: 166 VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 225
+ E+A++CL PMG+TSENVA RFG++R++QD A+ S +KAA+A + G F+ EI+PV
Sbjct: 168 LLESEKARDCLTPMGMTSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAEIVPVT 227
Query: 226 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285
T ++D K GD+K +T+S D+G+RP+T++ LAKLKP FK G+TTAGNSSQVSDGA AVL
Sbjct: 228 TTVLDDK-GDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVL 286
Query: 286 LMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 345
L +RS A GLPILGV R++A VGV P +MG+GPA AIPAA++ AGL ++DID+FEINE
Sbjct: 287 LARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINE 346
Query: 346 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 405
AFASQ VYC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E+KRRGR +GV+
Sbjct: 347 AFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVV 405
Query: 406 SMCIGTGMGAAAVFE 420
SMCIGTGMGAAAVFE
Sbjct: 406 SMCIGTGMGAAAVFE 420
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Mus musculus (taxid: 10090) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P07871|THIKB_RAT 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2 | Back alignment and function description |
|---|
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/433 (54%), Positives = 309/433 (71%), Gaps = 30/433 (6%)
Query: 5 INRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCK 64
++R QV+L HL + SS S L A+ C+AG A DVV+V RT + +
Sbjct: 1 MHRLQVVLGHLAGRSESS----SALQAAPCSAGFPQAS------ASDVVVVHGRRTPIGR 50
Query: 65 SKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAG 124
+ RGGFKDT PD+LL+ VL AV++ + P +GDI VG VL PG+ A+ R+A F +G
Sbjct: 51 AGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGAG-AAMARIAQFLSG 109
Query: 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVNPKVK 167
PETVP+ VNRQCSSGLQAVA++A I+ G YDIG +++ ++
Sbjct: 110 IPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLSERGNPGNISSRLL 169
Query: 168 AFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATK 227
E+A++CL+PMG+TSENVA RFG++R++QD A+ S +KAA+A + G F+ EI+PV T
Sbjct: 170 ENEKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTT 229
Query: 228 IVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLM 287
++D K GD K +T+S D+G+RP+T++ LAKLKP FK G+TTAGNSSQVSDGA AVLL
Sbjct: 230 VLDDK-GDRKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLA 288
Query: 288 KRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAF 347
+RS A GLPILGV R++A VGV P IMG+GPA AIPAA++ AGL ++DID+FEINEAF
Sbjct: 289 RRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAF 348
Query: 348 ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISM 407
ASQ +YC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E+KRRGR +GV+SM
Sbjct: 349 ASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSM 407
Query: 408 CIGTGMGAAAVFE 420
CIGTGMGAAAVFE
Sbjct: 408 CIGTGMGAAAVFE 420
|
Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q8VCH0|THIKB_MOUSE 3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/435 (54%), Positives = 313/435 (71%), Gaps = 34/435 (7%)
Query: 5 INRQQVLLEHL--RPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTAL 62
++R QV+L HL RP +SS+ L A+ C+AG + + S DVV+V RT +
Sbjct: 1 MHRLQVVLGHLAGRPESSSA------LQAAPCSAG----FLQASA--SDVVVVHGRRTPI 48
Query: 63 CKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFY 122
++ RG FKDT PD+LL+ VL AV++ + P ++GDI VG VL PG+ A R+A F
Sbjct: 49 GRASRGCFKDTTPDELLSAVLTAVLQDVKLKPEQLGDISVGNVLQPGAG-AIMARIAQFL 107
Query: 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVNPK 165
+G PETVP+ TVNRQCSSGLQAVA++A I+ G YDIG +++ +
Sbjct: 108 SGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLSQRGNHGNISSR 167
Query: 166 VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 225
+ E+A++CL+PMG+TSENVA RFGV+R++QD A+ S +KAA+A + G F EI+PV
Sbjct: 168 LLENEKARDCLIPMGITSENVAERFGVSRQKQDAFALASQQKAASAQSRGCFHAEIVPVT 227
Query: 226 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285
T +++ K GD+K +T+S D+G+RP+T++ LAKLKP FK G+TTAGNSSQVSDGA AVL
Sbjct: 228 TTVLNDK-GDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVL 286
Query: 286 LMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 345
L +RS A GLPILGV R++A VGV P +MG+GPA AIPAA++ AGL ++DID+FEINE
Sbjct: 287 LARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINE 346
Query: 346 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 405
AFASQ VYC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E+KRRGR +GV+
Sbjct: 347 AFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVV 405
Query: 406 SMCIGTGMGAAAVFE 420
SMCIGTGMGAAAVFE
Sbjct: 406 SMCIGTGMGAAAVFE 420
|
Mus musculus (taxid: 10090) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P21775|THIKA_RAT 3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2 | Back alignment and function description |
|---|
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/435 (54%), Positives = 311/435 (71%), Gaps = 34/435 (7%)
Query: 5 INRQQVLLEHL--RPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTAL 62
++R QV+L HL RP +SS+ L A+ C SA + + S DVV+V RT +
Sbjct: 1 MHRLQVVLGHLAGRPESSSA------LQAAPC----SATFPQASA--SDVVVVHGRRTPI 48
Query: 63 CKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFY 122
++ RGGFKDT PD+LL+ VL AV++ + P +GDI VG VL PG+ A R+A F
Sbjct: 49 GRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLEPGAG-AVMARIAQFL 107
Query: 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVNPK 165
+G PETVP+ VNRQCSSGLQAVA++A I+ G YDIG +++ +
Sbjct: 108 SGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSNRGNPGNISSR 167
Query: 166 VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 225
+ ++A++CL+PMG+TSENVA RFG++R++QD A+ S +KAA+A + G F+ EI+PV
Sbjct: 168 LLESDKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVT 227
Query: 226 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285
T ++D K GD K +T+S D+G+RP+T++ LAKLKP FK G+TTAGNSSQVSDGA AVL
Sbjct: 228 TTVLDDK-GDRKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVL 286
Query: 286 LMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 345
L +RS A GLPILGV R++A VGV P IMG+GPA AIPAA++ AGL ++DID+FEINE
Sbjct: 287 LARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINE 346
Query: 346 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 405
AFASQ +YC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E+KRRGR +GV+
Sbjct: 347 AFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVV 405
Query: 406 SMCIGTGMGAAAVFE 420
SMCIGTGMGAAAVFE
Sbjct: 406 SMCIGTGMGAAAVFE 420
|
Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P09110|THIK_HUMAN 3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/434 (53%), Positives = 306/434 (70%), Gaps = 32/434 (7%)
Query: 5 INRQQVLLEHLR-PSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALC 63
+ R QV+L HLR P++S + A+ C +G A DVV+V RTA+C
Sbjct: 1 MQRLQVVLGHLRGPADSGW-----MPQAAPCLSGAPQAS------AADVVVVHGRRTAIC 49
Query: 64 KSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYA 123
++ RGGFKDT PD+LL+ V+ AV++ N+ P ++GDI VG VL PG+ A R+A F +
Sbjct: 50 RAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAG-AIMARIAQFLS 108
Query: 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVNPKV 166
PETVP+ TVNRQCSSGLQAVA +A I+ G YDIG ++ ++
Sbjct: 109 DIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRL 168
Query: 167 KAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226
E+A++CL+PMG+TSENVA RFG++R++QD A+ S +KAA A + G F+ EI+PV T
Sbjct: 169 MEKEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTT 228
Query: 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLL 286
+ D K G ++ +T++ D+GIRP+T++ LAKLKP FKKDG+TTAGNSSQVSDGA A+LL
Sbjct: 229 TVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILL 287
Query: 287 MKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEA 346
+RS A GLPILGV R++A VGV P IMG+GPA AIP A++ AGL + D+D+FEINEA
Sbjct: 288 ARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEA 347
Query: 347 FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 406
FASQ YC KL L PEK+N GGA+A+GHPLG TGAR V TLL+E+KRRG+ +GV+S
Sbjct: 348 FASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRA-YGVVS 406
Query: 407 MCIGTGMGAAAVFE 420
MCIGTGMGAAAVFE
Sbjct: 407 MCIGTGMGAAAVFE 420
|
Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q05493|THIK_YARLI 3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=POT1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/392 (53%), Positives = 267/392 (68%), Gaps = 22/392 (5%)
Query: 45 TSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGT 104
TS DDVVI AAYRTA K +G FKDT +LLA +L+ +++++ +DP +GD+V G
Sbjct: 23 TSKNPDDVVITAAYRTAHTKGGKGLFKDTSSSELLASLLEGLVKESKIDPKLIGDVVCGN 82
Query: 105 VLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG---- 160
VLA G+ A+E R A AG PETVP +NRQCSSGL AV DVA I+AG DIG
Sbjct: 83 VLAAGAG-ATEHRAACLVAGIPETVPFVALNRQCSSGLMAVNDVANKIRAGQIDIGIGCG 141
Query: 161 -----------SVNP---KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHR 206
SV P K + E+A+ CL+PMG+TSENVA ++ V+RK QD A S+
Sbjct: 142 VESMSNQYGPNSVTPFSNKFQNNEEAKKCLIPMGITSENVAAKYNVSRKAQDAFAAKSYE 201
Query: 207 KAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 266
KAAAA AAGKF EI+P+ T ++D +EK VT++ DDGIRP + +L KLKP F +
Sbjct: 202 KAAAAQAAGKFDQEILPIKTTVLDDDD-NEKEVTVNKDDGIRPGVTAEKLGKLKPAFSAE 260
Query: 267 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPA 326
GTT AGN+SQ+SDGAGAVLLM+RSVA + G PIL F VGV P +MG+GPA AIPA
Sbjct: 261 GTTHAGNASQISDGAGAVLLMRRSVAEKLGQPILAKFVHCKTVGVPPELMGIGPAYAIPA 320
Query: 327 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCV 386
++ GL ++D+D+FEINEAFASQ ++ G+D K+N GGA+AIGHPLG TGAR
Sbjct: 321 VLEDLGLTVNDVDVFEINEAFASQALFSIQHCGIDESKVNPRGGAIAIGHPLGATGARQF 380
Query: 387 ATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 418
ATLL E+K G+ + GV SMCIGTGMGAA++
Sbjct: 381 ATLLSELKESGK--KVGVTSMCIGTGMGAASL 410
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P33291|THIKB_CANTR 3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1 | Back alignment and function description |
|---|
Score = 340 bits (872), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 183/391 (46%), Positives = 251/391 (64%), Gaps = 27/391 (6%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
DDVVIVAAYRTA+ K +G F++ + + +L LK I+KTN+DPS + D+ +G VL
Sbjct: 25 DDVVIVAAYRTAIGKGFKGSFRNVHSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQA 84
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG--------- 160
+ A+E R A AG P T VNR CSSGL A++D+A IK G + G
Sbjct: 85 AG-ATEHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMS 143
Query: 161 ----------SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210
++P + Q + CL+PMG+T+ENVA++F ++R+ QD+ A S+ KAA
Sbjct: 144 TNYRDPRVAPRIDPHLADDAQMEKCLIPMGITNENVANQFNISRERQDEFAAKSYNKAAK 203
Query: 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTT 270
A A+G FK EI+P+ + I+ G EK + + D+G R + L KL+P F DGTTT
Sbjct: 204 AVASGAFKSEILPIRS-IIRNSDGTEKEIIVDTDEGPREGVTAESLGKLRPAF--DGTTT 260
Query: 271 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKS 330
AGN+SQVSDGA AVLLMKRS+A KG PI+G + + GV P IMGVGPA AIP +K
Sbjct: 261 AGNASQVSDGAAAVLLMKRSLAEAKGYPIIGKYVLCSTAGVPPEIMGVGPAFAIPEVLKR 320
Query: 331 AGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLL 390
GL +DDID+FEINEAFA+Q +Y ++ + EK+N+NGGA+A+GHPLG TGAR AT++
Sbjct: 321 TGLTVDDIDVFEINEAFAAQCLYSAEQVNVPEEKLNINGGAIALGHPLGETGARQYATII 380
Query: 391 HEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+K + G+ SMCIG+GMG+A++ R
Sbjct: 381 PLLK----PGQIGLTSMCIGSGMGSASILVR 407
|
Candida tropicalis (taxid: 5482) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 445 | ||||||
| 449432452 | 462 | PREDICTED: 3-ketoacyl-CoA thiolase 2, pe | 0.993 | 0.956 | 0.848 | 0.0 | |
| 224057614 | 460 | predicted protein [Populus trichocarpa] | 0.991 | 0.958 | 0.847 | 0.0 | |
| 442569925 | 464 | 3-ketoacyl-CoA thiolase 1 [Rehmannia glu | 0.995 | 0.954 | 0.846 | 0.0 | |
| 440808089 | 464 | 3-ketoacyl-CoA thiolase 2 [Rehmannia glu | 0.995 | 0.954 | 0.846 | 0.0 | |
| 15225798 | 462 | 3-ketoacyl-CoA thiolase 2 [Arabidopsis t | 0.995 | 0.958 | 0.856 | 0.0 | |
| 7433647 | 461 | acetyl-CoA C-acyltransferase (EC 2.3.1.1 | 0.993 | 0.958 | 0.845 | 0.0 | |
| 257815409 | 463 | 3-ketoacyl CoA thiolase 2 [Petunia x hyb | 1.0 | 0.961 | 0.835 | 0.0 | |
| 147866537 | 461 | hypothetical protein VITISV_023191 [Viti | 0.993 | 0.958 | 0.847 | 0.0 | |
| 297826765 | 462 | hypothetical protein ARALYDRAFT_482251 [ | 0.995 | 0.958 | 0.847 | 0.0 | |
| 225433424 | 461 | PREDICTED: 3-ketoacyl-CoA thiolase 2, pe | 0.993 | 0.958 | 0.843 | 0.0 |
| >gi|449432452|ref|XP_004134013.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Cucumis sativus] gi|449487514|ref|XP_004157664.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Cucumis sativus] gi|393707|emb|CAA47926.1| 3-ketoacyl-CoA thiolase [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/461 (84%), Positives = 422/461 (91%), Gaps = 19/461 (4%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ +LL HLRPS SS++ ES LSAS CAAGDSA+Y RTSV+GDDVVIVAAYRT
Sbjct: 1 MEKAINRQSILLHHLRPS-SSAYTNESSLSASVCAAGDSASYQRTSVFGDDVVIVAAYRT 59
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
A+CKSKRGGFKDTYPDDLLAPVLKA+IEKTN++PSEVGDIVVG+VLAPGSQRASECRMAA
Sbjct: 60 AICKSKRGGFKDTYPDDLLAPVLKALIEKTNLNPSEVGDIVVGSVLAPGSQRASECRMAA 119
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVN 163
FYAGFPETVPVRTVNRQCSSGLQAVADVAAAI+AGFYDIG SVN
Sbjct: 120 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLESMTTNPMAWEGSVN 179
Query: 164 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 223
P+VK+ E AQNCLLPMGVTSENVA RFGV+R++QDQAA++SHRKAAAATA+GKFKDEIIP
Sbjct: 180 PRVKSIENAQNCLLPMGVTSENVAQRFGVSREKQDQAAIESHRKAAAATASGKFKDEIIP 239
Query: 224 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283
V+TKI+DPKTG EKPVTISVDDGIRPNT+ ++L KLK VFKKDGTTTAGNSSQVSDGAGA
Sbjct: 240 VSTKIIDPKTGQEKPVTISVDDGIRPNTTQADLGKLKAVFKKDGTTTAGNSSQVSDGAGA 299
Query: 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343
VLLMKRSVAMRKGLPILGVFRTF+AVGVDPAIMGVGPAVAIPAAVK+AGL+L+DIDLFEI
Sbjct: 300 VLLMKRSVAMRKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDIDLFEI 359
Query: 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 403
NEAFASQFVYCRNKLGLDPEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 360 NEAFASQFVYCRNKLGLDPEKINVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFG 419
Query: 404 VISMCIGTGMGAAAVFERGDCADELCNVRKVESN-NFLSKD 443
VISMCIGTGMGAAAVFERGDC DELCN +KVE N LSKD
Sbjct: 420 VISMCIGTGMGAAAVFERGDCVDELCNAKKVEGGVNLLSKD 460
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224057614|ref|XP_002299284.1| predicted protein [Populus trichocarpa] gi|222846542|gb|EEE84089.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/460 (84%), Positives = 419/460 (91%), Gaps = 19/460 (4%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ+VLLEHLRPS SSHN+ES LSASAC AGDSAAY RTS YGDDVVIVAAYRT
Sbjct: 1 MEKAINRQRVLLEHLRPS--SSHNFESTLSASACLAGDSAAYQRTSAYGDDVVIVAAYRT 58
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
CKSKRGGFKDT+ DDLLAPVLKA+IEKTN+DP EVGDIVVG+VLAPGSQRASECRMAA
Sbjct: 59 PQCKSKRGGFKDTHADDLLAPVLKALIEKTNLDPREVGDIVVGSVLAPGSQRASECRMAA 118
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVN 163
FYAGFPETVP+RTVNRQCSSGLQAVADVAA+IKAGFY+IG VN
Sbjct: 119 FYAGFPETVPIRTVNRQCSSGLQAVADVAASIKAGFYEIGIGAGLESMTINQMSWDGDVN 178
Query: 164 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 223
PK+K F++AQ+CLLPMG+TSENVAHRFGVTR+EQDQAAVDSHRKAAAATA+G+FKDEIIP
Sbjct: 179 PKLKNFQKAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGRFKDEIIP 238
Query: 224 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283
VATKIVDPKTGDEKP+ +SVDDGIRP TSV+ L KLK VFKKDGTTTAGNSSQ+SDGAGA
Sbjct: 239 VATKIVDPKTGDEKPIVVSVDDGIRPETSVAGLGKLKTVFKKDGTTTAGNSSQISDGAGA 298
Query: 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343
VLLMKRSVA++KGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVK+AGL+L+DIDLFEI
Sbjct: 299 VLLMKRSVAVQKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKAAGLELEDIDLFEI 358
Query: 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 403
NEAFASQFVYCR KL LDP+KINVNGGA+AIGHPLG TGARCVATLLHEMKRRGRDCRFG
Sbjct: 359 NEAFASQFVYCRKKLELDPQKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGRDCRFG 418
Query: 404 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 443
V+SMCIGTGMGAAAVFERGD DELCN RKVESNN LSKD
Sbjct: 419 VVSMCIGTGMGAAAVFERGDGCDELCNARKVESNNLLSKD 458
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|442569925|gb|AGC59769.1| 3-ketoacyl-CoA thiolase 1 [Rehmannia glutinosa] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/462 (84%), Positives = 422/462 (91%), Gaps = 19/462 (4%)
Query: 1 MEKAINRQQVLLEHLRPSNSSS--HNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAY 58
MEKA RQ+VLL+HLRPS +SS + ES +SAS C+AGDSAAYHR+SV+GDDVVIVAAY
Sbjct: 1 MEKATERQRVLLQHLRPSFTSSSLEDIESSVSASICSAGDSAAYHRSSVFGDDVVIVAAY 60
Query: 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRM 118
RTALCKSKRGGFKDTYPDDLLAPVL+AV+EKTNV+P+EVGDIVVGTVLAPGSQRASECRM
Sbjct: 61 RTALCKSKRGGFKDTYPDDLLAPVLRAVVEKTNVNPNEVGDIVVGTVLAPGSQRASECRM 120
Query: 119 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------S 161
AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG S
Sbjct: 121 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS 180
Query: 162 VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEI 221
VNP+VK+ QAQ+CLLPMG+TSENVAHRFGVTR+EQDQAAVDSHRKAAAATA+GKFKDEI
Sbjct: 181 VNPRVKSMAQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGKFKDEI 240
Query: 222 IPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 281
IPV TKIVDPK+GDEKPVTISVDDGIRPNTSV++L KLKPVFKKDG+TTAGNSSQVSDGA
Sbjct: 241 IPVKTKIVDPKSGDEKPVTISVDDGIRPNTSVADLGKLKPVFKKDGSTTAGNSSQVSDGA 300
Query: 282 GAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 341
GAVLLMKRSVAM+KGLPILGVFR+FAAVGVDPAIMGVGPAVAIPAAVKSAGL+L DIDLF
Sbjct: 301 GAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAIMGVGPAVAIPAAVKSAGLELGDIDLF 360
Query: 342 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCR 401
E+NEAFASQFVYCR KL LDPEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCR
Sbjct: 361 EVNEAFASQFVYCRKKLELDPEKINVNGGAMAIGHPLGVTGARCVATLLHEMKRRGKDCR 420
Query: 402 FGVISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 443
FGV+SMCIGTGMGAAAVFERGD DEL N R V ++NFLSKD
Sbjct: 421 FGVVSMCIGTGMGAAAVFERGDSCDELSNARTVGTHNFLSKD 462
|
Source: Rehmannia glutinosa Species: Rehmannia glutinosa Genus: Rehmannia Family: Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|440808089|gb|AGC24176.1| 3-ketoacyl-CoA thiolase 2 [Rehmannia glutinosa] | Back alignment and taxonomy information |
|---|
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/462 (84%), Positives = 421/462 (91%), Gaps = 19/462 (4%)
Query: 1 MEKAINRQQVLLEHLRPSNSSS--HNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAY 58
MEKA RQ+VLL+HLRPS +SS + ES +SAS C+AGDSAAYHR+SV+GDDVVIVAAY
Sbjct: 1 MEKATERQRVLLQHLRPSFTSSSLEDIESSVSASICSAGDSAAYHRSSVFGDDVVIVAAY 60
Query: 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRM 118
RTALCKSKRGGFKDTYPDDLLAPVL+AV+EKTNV+P+EVGDIVVGTVLAPGSQRASECRM
Sbjct: 61 RTALCKSKRGGFKDTYPDDLLAPVLRAVVEKTNVNPNEVGDIVVGTVLAPGSQRASECRM 120
Query: 119 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------S 161
AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG S
Sbjct: 121 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS 180
Query: 162 VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEI 221
VNP+VK+ QAQ+CLLPMG+TSENVAHRFGVTR+EQDQAAVDSHRKAAAATA+GKFKDEI
Sbjct: 181 VNPRVKSMAQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGKFKDEI 240
Query: 222 IPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 281
IPV TKIVDPK+GDEKPVTISVDDGIRPNTSV++L KLKPVFKKDG+TTAGNSSQVSDGA
Sbjct: 241 IPVKTKIVDPKSGDEKPVTISVDDGIRPNTSVADLGKLKPVFKKDGSTTAGNSSQVSDGA 300
Query: 282 GAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 341
GAVLLMKRSVAM+KGLPILGVFR+FAAVGVDPAIMGVGPAVAIPAAVKSAGL+L DIDLF
Sbjct: 301 GAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAIMGVGPAVAIPAAVKSAGLELGDIDLF 360
Query: 342 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCR 401
EINEAFASQFVYCR KL LDPEKINVNGGA+AIGHPLG TGARCV TLLHEMKRRG+DCR
Sbjct: 361 EINEAFASQFVYCRKKLELDPEKINVNGGAMAIGHPLGVTGARCVVTLLHEMKRRGKDCR 420
Query: 402 FGVISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 443
FGV+SMCIGTGMGAAAVFERGD DEL N R V ++NFLSKD
Sbjct: 421 FGVVSMCIGTGMGAAAVFERGDSCDELSNTRTVGTHNFLSKD 462
|
Source: Rehmannia glutinosa Species: Rehmannia glutinosa Genus: Rehmannia Family: Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15225798|ref|NP_180873.1| 3-ketoacyl-CoA thiolase 2 [Arabidopsis thaliana] gi|73919871|sp|Q56WD9.2|THIK2_ARATH RecName: Full=3-ketoacyl-CoA thiolase 2, peroxisomal; AltName: Full=Acetyl-CoA acyltransferase 2; AltName: Full=Beta-ketothiolase 2; AltName: Full=Peroxisomal 3-oxoacyl-CoA thiolase 2; AltName: Full=Peroxisome defective protein 1; Flags: Precursor gi|11993853|gb|AAG42910.1|AF327529_1 putative 3-ketoacyl-CoA thiolase [Arabidopsis thaliana] gi|13194830|gb|AAK15577.1|AF349530_1 putative 3-ketoacyl-CoA thiolase [Arabidopsis thaliana] gi|2924779|gb|AAC04908.1| 3-ketoacyl-CoA thiolase [Arabidopsis thaliana] gi|2981616|dbj|BAA25248.1| 3-ketoacyl-CoA thiolase [Arabidopsis thaliana] gi|2981618|dbj|BAA25249.1| 3-ketoacyl-CoA thiolase [Arabidopsis thaliana] gi|15450669|gb|AAK96606.1| At2g33150/F25I18.11 [Arabidopsis thaliana] gi|17380614|gb|AAL36070.1| At2g33150/F25I18.11 [Arabidopsis thaliana] gi|21593136|gb|AAM65085.1| 3-ketoacyl-CoA thiolase [Arabidopsis thaliana] gi|330253697|gb|AEC08791.1| 3-ketoacyl-CoA thiolase 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/460 (85%), Positives = 420/460 (91%), Gaps = 17/460 (3%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAI RQ+VLLEHLRPS+SSSHNYE+ LSASAC AGDSAAY RTS+YGDDVVIVAA+RT
Sbjct: 1 MEKAIERQRVLLEHLRPSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRT 60
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
LCKSKRG FKDTYPDDLLAPVL+A+IEKTN++PSEVGDIVVGTVLAPGSQRASECRMAA
Sbjct: 61 PLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAA 120
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVN 163
FYAGFPETV VRTVNRQCSSGLQAVADVAAAIKAGFYDIG SVN
Sbjct: 121 FYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVN 180
Query: 164 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 223
P VK F QAQNCLLPMGVTSENVA RFGV+R+EQDQAAVDSHRKAAAATAAGKFKDEIIP
Sbjct: 181 PAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
Query: 224 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283
V TK+VDPKTGDEKP+T+SVDDGIRP T+++ L KLKPVFKKDGTTTAGNSSQVSDGAGA
Sbjct: 241 VKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGA 300
Query: 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343
VLLMKRSVAM+KGLP+LGVFRTFAAVGVDPAIMG+GPAVAIPAAVK+AGL+LDDIDLFEI
Sbjct: 301 VLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEI 360
Query: 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 403
NEAFASQFVYCRNKLGLDPEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 361 NEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFG 420
Query: 404 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 443
V+SMCIGTGMGAAAVFERGD DEL N RKVE+ LSKD
Sbjct: 421 VVSMCIGTGMGAAAVFERGDGVDELRNARKVEAQGLLSKD 460
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7433647|pir||S72532 acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucurbit gi|1694621|dbj|BAA11117.1| 3-ketoacyl-CoA thiolase [Cucurbita cv. Kurokawa Amakuri] | Back alignment and taxonomy information |
|---|
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/460 (84%), Positives = 421/460 (91%), Gaps = 18/460 (3%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ +LL HLRPS+S+ + S LSAS CAAGDSA+Y RTSV+GDDVVIVAAYRT
Sbjct: 1 MEKAINRQSILLHHLRPSSSAYSHESS-LSASVCAAGDSASYQRTSVFGDDVVIVAAYRT 59
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
ALCKSKRGGFKDTYPDDLLAPVLKA+IEKTN++PSEVGDIVVG+VLAPGSQRASECRMA
Sbjct: 60 ALCKSKRGGFKDTYPDDLLAPVLKALIEKTNLNPSEVGDIVVGSVLAPGSQRASECRMAT 119
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVN 163
FY GFPETVPVRTVNRQCSSGLQAVADVAAAI+AGFYDIG SVN
Sbjct: 120 FYPGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLESMTVNPMAWDGSVN 179
Query: 164 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 223
P+VK+ E AQNCLLPMGVTSENVA RFGV+R+EQD+AAV+SHRKAAAATA+GKFKDEIIP
Sbjct: 180 PRVKSMENAQNCLLPMGVTSENVAQRFGVSREEQDKAAVESHRKAAAATASGKFKDEIIP 239
Query: 224 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283
V+TKI+DPKTG+E+PVTISVDDGIRPNT+ ++L KLKPVFKKDGTTTAGNSSQVSDGAGA
Sbjct: 240 VSTKIIDPKTGEERPVTISVDDGIRPNTTQADLGKLKPVFKKDGTTTAGNSSQVSDGAGA 299
Query: 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343
VLLMKRSVAM+KGLPILGVFRTF AVGVDPAIMGVGPAVAIPAAVK+AGL+L+DIDLFEI
Sbjct: 300 VLLMKRSVAMQKGLPILGVFRTFTAVGVDPAIMGVGPAVAIPAAVKAAGLELNDIDLFEI 359
Query: 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 403
NEAFASQFVYCRNKLGLDPEKINVNGGA+AIGHPLGTTGARCVATLLHEMKRRG+DCRFG
Sbjct: 360 NEAFASQFVYCRNKLGLDPEKINVNGGAIAIGHPLGTTGARCVATLLHEMKRRGKDCRFG 419
Query: 404 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 443
VISMCIGTGMGAAAVFERGDC DELCN +KVE N LSKD
Sbjct: 420 VISMCIGTGMGAAAVFERGDCVDELCNAKKVEGINLLSKD 459
|
Source: Cucurbita cv. Kurokawa Amakuri Species: Cucurbita hybrid cultivar Genus: Cucurbita Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|257815409|gb|ACV70033.1| 3-ketoacyl CoA thiolase 2 [Petunia x hybrida] | Back alignment and taxonomy information |
|---|
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/463 (83%), Positives = 418/463 (90%), Gaps = 18/463 (3%)
Query: 1 MEKAINRQQVLLEHLRPSNSSS--HNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAY 58
ME++I RQ+VLL+HLRPS +SS N +S +SAS C+AGDSAAY RTSV+GDDVVIVAAY
Sbjct: 1 MERSIERQRVLLQHLRPSQTSSSLENLDSSISASVCSAGDSAAYQRTSVFGDDVVIVAAY 60
Query: 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRM 118
RT LCK+KRG FKDTYPDDLLAPVLKA++EKTNV PSEVGDIVVGTVLAPGSQRASECRM
Sbjct: 61 RTPLCKAKRGSFKDTYPDDLLAPVLKALMEKTNVSPSEVGDIVVGTVLAPGSQRASECRM 120
Query: 119 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG----------------SV 162
AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG
Sbjct: 121 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPRLGRFS 180
Query: 163 NPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEII 222
NPKVK QAQ+CLLPMGVTSENVAHRFGVTR+EQDQAAVDSHRKAAAATA+GKFKDEII
Sbjct: 181 NPKVKTMAQAQDCLLPMGVTSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGKFKDEII 240
Query: 223 PVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAG 282
PVATKIVDPKTGDE PVTISVDDGIRPN SVS+LAKL+PVFKKDGTTTAGNSSQV+DGAG
Sbjct: 241 PVATKIVDPKTGDETPVTISVDDGIRPNASVSDLAKLRPVFKKDGTTTAGNSSQVTDGAG 300
Query: 283 AVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 342
AVLLMKRS+AM+KGLPILGVFRTFAAVGVDPAIMG+GPAVAIPAAVKSAGL+L+DIDLFE
Sbjct: 301 AVLLMKRSLAMQKGLPILGVFRTFAAVGVDPAIMGIGPAVAIPAAVKSAGLELEDIDLFE 360
Query: 343 INEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRF 402
INEAFASQ+VYCR KL LDPEKINVNG A+A+GHPLG TGARCVATLLHEMKRRG+DCRF
Sbjct: 361 INEAFASQYVYCRKKLELDPEKINVNGSAMALGHPLGATGARCVATLLHEMKRRGKDCRF 420
Query: 403 GVISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKDVL 445
GV+SMCIGTGMGAAAVFERGD DEL N RK++S+N LSKD L
Sbjct: 421 GVVSMCIGTGMGAAAVFERGDSCDELRNARKIDSHNLLSKDAL 463
|
Source: Petunia x hybrida Species: Petunia x hybrida Genus: Petunia Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147866537|emb|CAN81585.1| hypothetical protein VITISV_023191 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/460 (84%), Positives = 420/460 (91%), Gaps = 18/460 (3%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ+VLL+HL PS+S++ + S LSAS C AGDSAAY RTSV+GDDVVIVAAYRT
Sbjct: 1 MEKAINRQRVLLQHLSPSSSAAEDESS-LSASVCVAGDSAAYQRTSVFGDDVVIVAAYRT 59
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
ALCKSKRGGFKDTYPDDLLAPVL+A+IEKTN++P+EVGDIVVGTVLAPGSQRASECRMAA
Sbjct: 60 ALCKSKRGGFKDTYPDDLLAPVLRALIEKTNLNPNEVGDIVVGTVLAPGSQRASECRMAA 119
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVN 163
FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG S+N
Sbjct: 120 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTANPMAWEGSIN 179
Query: 164 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 223
PKVK F QAQ+CLLPMG+TSENVAHRFGVTR+EQDQAAV+SH++AAAATA GKFKDEIIP
Sbjct: 180 PKVKEFVQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVESHKRAAAATATGKFKDEIIP 239
Query: 224 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283
V+TKIVDPKTGDEKPVTISVDDGIRPN +S+LAKLKPVFKK+GTTTAGNSSQVSDGAGA
Sbjct: 240 VSTKIVDPKTGDEKPVTISVDDGIRPNAIMSDLAKLKPVFKKNGTTTAGNSSQVSDGAGA 299
Query: 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343
VLLMKRSVAMRKGLPILGVFRTFAAVGVDPA+MG+GPAVAIPAAVKSAGL+LDDIDLFEI
Sbjct: 300 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEI 359
Query: 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 403
NEAFASQFVYCR KL LDPEKINVNGGA+AIGHPLG TGARCV TLLHEMKRRG+DCRFG
Sbjct: 360 NEAFASQFVYCRKKLDLDPEKINVNGGAMAIGHPLGATGARCVGTLLHEMKRRGKDCRFG 419
Query: 404 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 443
V+SMCIGTGMGAAAVFERGDC DEL N R E+NN LSKD
Sbjct: 420 VVSMCIGTGMGAAAVFERGDCVDELRNARTAENNNLLSKD 459
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297826765|ref|XP_002881265.1| hypothetical protein ARALYDRAFT_482251 [Arabidopsis lyrata subsp. lyrata] gi|297327104|gb|EFH57524.1| hypothetical protein ARALYDRAFT_482251 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/460 (84%), Positives = 420/460 (91%), Gaps = 17/460 (3%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAI RQ+VLLEHLRPS+SSSHN+E+ LSASAC AGDSAAY RTS+YGDDVVIVAA+RT
Sbjct: 1 MEKAIERQRVLLEHLRPSSSSSHNFEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRT 60
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
LCKSKRG FKDTYPDDLLAPVL+A+IEKTN++PSEVGDIVVGTVLAPGSQRASECRM+A
Sbjct: 61 PLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMSA 120
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVN 163
FYAGFPETV VRTVNRQCSSGLQAVADVAAAIKAGFYDIG SVN
Sbjct: 121 FYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVN 180
Query: 164 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 223
P VK F QAQNCLLPMGVTSENVA RFGV+R+EQDQAAVDSHRKAAAATAAGKFKDEIIP
Sbjct: 181 PAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
Query: 224 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283
V TK+VDPKTGDEKP+T+SVDDGIRP T+++ L KLKPVFKKDGTTTAGNSSQVSDGAGA
Sbjct: 241 VKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGA 300
Query: 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343
VLLMKRSVAM+KGLP+LGVFRTFAAVGVDPAIMG+GPAVAIPAAVK+AGL+LDDIDLFEI
Sbjct: 301 VLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEI 360
Query: 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 403
NEAFASQFVYCRNKLGL+PEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 361 NEAFASQFVYCRNKLGLNPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFG 420
Query: 404 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 443
V+SMCIGTGMGAAAVFERGD DEL N +KVE+ LSKD
Sbjct: 421 VVSMCIGTGMGAAAVFERGDGVDELRNAKKVEAQGLLSKD 460
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225433424|ref|XP_002285653.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal isoform 1 [Vitis vinifera] gi|297741919|emb|CBI33354.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/460 (84%), Positives = 420/460 (91%), Gaps = 18/460 (3%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ+VLL+HL PS+S++ + S LSAS C AGDSAAY RTSV+GDDVVIVAAYRT
Sbjct: 1 MEKAINRQRVLLQHLSPSSSAAEDESS-LSASVCVAGDSAAYQRTSVFGDDVVIVAAYRT 59
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
ALCKSKRGGFKDTYPDDLLAPVL+A++EKTN++P+EVGDIVVGTVLAPGSQRASECRMAA
Sbjct: 60 ALCKSKRGGFKDTYPDDLLAPVLRALLEKTNLNPNEVGDIVVGTVLAPGSQRASECRMAA 119
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVN 163
FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG S+N
Sbjct: 120 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTANPMAWEGSIN 179
Query: 164 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 223
PKVK F QAQ+CLLPMG+TSENVAHRFGVTR+EQDQAAV+SH++AAAATA GKFKDEIIP
Sbjct: 180 PKVKEFVQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVESHKRAAAATATGKFKDEIIP 239
Query: 224 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283
V+TKIVDPKTGDEK VTISVDDGIRPN ++S+LAKLKPVFKK+GTTTAGNSSQVSDGAGA
Sbjct: 240 VSTKIVDPKTGDEKLVTISVDDGIRPNATMSDLAKLKPVFKKNGTTTAGNSSQVSDGAGA 299
Query: 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343
VLLMKRSVAMRKGLPILGVFRTFAAVGVDPA+MG+GPAVAIPAAVKSAGL+LDDIDLFEI
Sbjct: 300 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEI 359
Query: 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 403
NEAFASQFVYCR KL LDPEKINVNGGA+AIGHPLG TGARCV TLLHEMKRRG+DCRFG
Sbjct: 360 NEAFASQFVYCRKKLDLDPEKINVNGGAMAIGHPLGATGARCVGTLLHEMKRRGKDCRFG 419
Query: 404 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 443
V+SMCIGTGMGAAAVFERGDC DEL N R E+NN LSKD
Sbjct: 420 VVSMCIGTGMGAAAVFERGDCVDELRNARTAENNNLLSKD 459
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 445 | ||||||
| TAIR|locus:2046565 | 462 | PKT3 "peroxisomal 3-ketoacyl-C | 0.638 | 0.614 | 0.820 | 3.6e-187 | |
| TAIR|locus:2197778 | 443 | PKT4 "peroxisomal 3-ketoacyl-C | 0.617 | 0.620 | 0.807 | 9.8e-172 | |
| TAIR|locus:2156514 | 457 | KAT5 "3-KETO-ACYL-COENZYME A T | 0.617 | 0.601 | 0.694 | 1.2e-151 | |
| UNIPROTKB|P09110 | 424 | ACAA1 "3-ketoacyl-CoA thiolase | 0.824 | 0.865 | 0.534 | 9.1e-100 | |
| UNIPROTKB|F1RRB7 | 426 | ACAA1 "Uncharacterized protein | 0.826 | 0.863 | 0.533 | 1.5e-99 | |
| MGI|MGI:2148491 | 424 | Acaa1a "acetyl-Coenzyme A acyl | 0.901 | 0.945 | 0.501 | 3.1e-99 | |
| ZFIN|ZDB-GENE-040704-48 | 418 | acaa1 "acetyl-Coenzyme A acylt | 0.838 | 0.892 | 0.521 | 3.9e-99 | |
| UNIPROTKB|F1NB64 | 425 | ACAA1 "Uncharacterized protein | 0.826 | 0.865 | 0.530 | 6.4e-99 | |
| RGD|1562373 | 424 | Acaa1b "acetyl-Coenzyme A acyl | 0.824 | 0.865 | 0.534 | 1.3e-98 | |
| UNIPROTKB|E2REH5 | 426 | ACAA1 "Uncharacterized protein | 0.826 | 0.863 | 0.530 | 1.7e-98 |
| TAIR|locus:2046565 PKT3 "peroxisomal 3-ketoacyl-CoA thiolase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1209 (430.6 bits), Expect = 3.6e-187, Sum P(2) = 3.6e-187
Identities = 233/284 (82%), Positives = 249/284 (87%)
Query: 160 GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXXXXGKFKD 219
GSVNP VK F QAQNCLLPMGVTSENVA RFGV+R+EQDQAAVDSHRK GKFKD
Sbjct: 177 GSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKD 236
Query: 220 EIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSD 279
EIIPV TK+VDPKTGDEKP+T+SVDDGIRP T+++ L KLKPVFKKDGTTTAGNSSQVSD
Sbjct: 237 EIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSD 296
Query: 280 GAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAGLQLDDID 339
GAGAVLLMKRSVAM+KGLP+LGVFRTFAAVGVDPAIM K+AGL+LDDID
Sbjct: 297 GAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDID 356
Query: 340 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRD 399
LFEINEAFASQFVYCRNKLGLDPEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+D
Sbjct: 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKD 416
Query: 400 CRFGVISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 443
CRFGV+SMCIGTGMGAAAVFERGD DEL N RKVE+ LSKD
Sbjct: 417 CRFGVVSMCIGTGMGAAAVFERGDGVDELRNARKVEAQGLLSKD 460
|
|
| TAIR|locus:2197778 PKT4 "peroxisomal 3-ketoacyl-CoA thiolase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1166 (415.5 bits), Expect = 9.8e-172, Sum P(2) = 9.8e-172
Identities = 222/275 (80%), Positives = 244/275 (88%)
Query: 160 GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXXXXGKFKD 219
GSVNP VK FEQA NCLLPMG+TSENVAHRF V+R+EQDQAAVDSHRK GKFKD
Sbjct: 169 GSVNPNVKKFEQAHNCLLPMGITSENVAHRFNVSREEQDQAAVDSHRKAASATASGKFKD 228
Query: 220 EIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSD 279
EI PV TKIVDPKTGDEKP+T+SVDDGIRPNT++S LAKLKPVFK+DGTTTAGNSSQ+SD
Sbjct: 229 EITPVKTKIVDPKTGDEKPITVSVDDGIRPNTTLSGLAKLKPVFKEDGTTTAGNSSQLSD 288
Query: 280 GAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAGLQLDDID 339
GAGAVLLM+R+VAM+KGLPILGVFRTF+AVGVDPAIM K+AGL+L+D+D
Sbjct: 289 GAGAVLLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVD 348
Query: 340 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRD 399
LFEINEAFASQFVYCRNKLGLD EKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+D
Sbjct: 349 LFEINEAFASQFVYCRNKLGLDAEKINVNGGAIAIGHPLGATGARCVATLLHEMKRRGKD 408
Query: 400 CRFGVISMCIGTGMGAAAVFERGDCADELCNVRKV 434
CRFGV+SMCIG+GMGAAAVFERG DELC+VRKV
Sbjct: 409 CRFGVVSMCIGSGMGAAAVFERGGGVDELCDVRKV 443
|
|
| TAIR|locus:2156514 KAT5 "3-KETO-ACYL-COENZYME A THIOLASE 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1004 (358.5 bits), Expect = 1.2e-151, Sum P(2) = 1.2e-151
Identities = 193/278 (69%), Positives = 229/278 (82%)
Query: 155 GFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXXXX 214
GF+ GS NP+ + F +A++CLLPMG+TSENVA RFGVTR+EQD AAV+SH++
Sbjct: 176 GFH--GS-NPRAQDFPKARDCLLPMGITSENVAERFGVTREEQDMAAVESHKRAAAAIAS 232
Query: 215 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNS 274
GK KDEIIPVATKIVDP+T EK + +SVDDG+RPN+++++LAKLK VFK++G+TTAGN+
Sbjct: 233 GKLKDEIIPVATKIVDPETKAEKAIVVSVDDGVRPNSNMADLAKLKTVFKQNGSTTAGNA 292
Query: 275 SQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAGLQ 334
SQ+SDGAGAVLLMKRS+AM+KGLPILGVFR+FA GV+P++M K AGL
Sbjct: 293 SQISDGAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMGIGPAVAIPAATKLAGLN 352
Query: 335 LDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394
+ DIDLFEINEAFASQ+VY KL LD EK+NVNGGA+AIGHPLG TGARCVATLLHEMK
Sbjct: 353 VSDIDLFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGHPLGATGARCVATLLHEMK 412
Query: 395 RRGRDCRFGVISMCIGTGMGAAAVFERGDCADELCNVR 432
RRG+DCRFGVISMCIGTGMGAAAVFERGD D L N R
Sbjct: 413 RRGKDCRFGVISMCIGTGMGAAAVFERGDSVDNLSNAR 450
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| UNIPROTKB|P09110 ACAA1 "3-ketoacyl-CoA thiolase, peroxisomal" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 207/387 (53%), Positives = 265/387 (68%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DVV+V RTA+C++ RGGFKDT PD+LL+ V+ AV++ N+ P ++GDI VG VL PG+
Sbjct: 37 DVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA 96
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGSV-------- 162
A R+A F + PETVP+ TVNRQCSSGLQ G YDIG
Sbjct: 97 G-AIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSL 155
Query: 163 ----NP-----KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXXX 213
NP ++ E+A++CL+PMG+TSENVA RFG++R++QD A+ S +K
Sbjct: 156 ADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQS 215
Query: 214 XGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGN 273
G F+ EI+PV T + D K G ++ +T++ D+GIRP+T++ LAKLKP FKKDG+TTAGN
Sbjct: 216 KGCFQAEIVPVTTTVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGN 274
Query: 274 SSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAGL 333
SSQVSDGA A+LL +RS A GLPILGV R++A VGV P IM + AGL
Sbjct: 275 SSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGL 334
Query: 334 QLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEM 393
+ D+D+FEINEAFASQ YC KL L PEK+N GGA+A+GHPLG TGAR V TLL+E+
Sbjct: 335 TVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNEL 394
Query: 394 KRRGRDCRFGVISMCIGTGMGAAAVFE 420
KRRG+ +GV+SMCIGTGMGAAAVFE
Sbjct: 395 KRRGKRA-YGVVSMCIGTGMGAAAVFE 420
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| UNIPROTKB|F1RRB7 ACAA1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 207/388 (53%), Positives = 267/388 (68%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
+D+V+V RTA+ +S RGGFKDT PD+LL+ V+ AV++ + P+++GDI VG VL PG
Sbjct: 38 EDIVVVHGRRTAIGRSGRGGFKDTTPDELLSAVMTAVLQDVKLSPAQLGDICVGNVLQPG 97
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGSV------- 162
+ A R+A F + PETVP+ TVNRQCSSGLQ G YDIG
Sbjct: 98 AG-AVMARIAQFLSDIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMT 156
Query: 163 -----NP-----KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXX 212
NP ++ E+A++CL+PMG+TSENVA RFG++R++QD A+ S +K
Sbjct: 157 LGDRGNPGNISSRLVEKEKARDCLIPMGITSENVAKRFGISREKQDTFALASQQKAARAQ 216
Query: 213 XXGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAG 272
G F+ EI+PV T + D K G+EK +T++ D+GIRPNT++ LAKLKP FK+ G+TTAG
Sbjct: 217 SKGCFQAEIVPVTTTVYDDK-GNEKSITVAQDEGIRPNTTMEGLAKLKPAFKQGGSTTAG 275
Query: 273 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAG 332
NSSQVSDGA A+LL +RS A GLPILG+ R++A VGV P IM + AG
Sbjct: 276 NSSQVSDGAAALLLARRSKAKELGLPILGILRSYAVVGVPPDIMGIGPAYAIPVALEKAG 335
Query: 333 LQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHE 392
L +DDID+FEINEAFASQ +YC KL L PEK+N GGA+A+GHPLG TGAR V TLL+E
Sbjct: 336 LTVDDIDIFEINEAFASQALYCVEKLKLPPEKVNPLGGAVALGHPLGCTGARQVITLLNE 395
Query: 393 MKRRGRDCRFGVISMCIGTGMGAAAVFE 420
+KRRG+ +GV+SMCIGTGMGAAAVFE
Sbjct: 396 LKRRGKRA-YGVVSMCIGTGMGAAAVFE 422
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| MGI|MGI:2148491 Acaa1a "acetyl-Coenzyme A acyltransferase 1A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 218/435 (50%), Positives = 282/435 (64%)
Query: 5 INRQQVLLEHL--RPSNSSSHNYESILXXXXXXXXXXXXYHRTSVYGDDVVIVAAYRTAL 62
++R QV+L HL RP +SS+ + + S DVV+V RT +
Sbjct: 1 MHRLQVVLGHLAGRPESSSA----------LQAAPCSARFPQASA--SDVVVVHGRRTPI 48
Query: 63 CKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFY 122
++ RGGFK+T PD+LL+ VL AV++ + P ++GDI VG VL PG+ A R+A F
Sbjct: 49 GRASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAG-AVMARIAQFL 107
Query: 123 AGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGSV------------NP-----K 165
+G PETVP+ TVNRQCSSGLQ G YDIG NP +
Sbjct: 108 SGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSGMGNPGNISSR 167
Query: 166 VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXXXXGKFKDEIIPVA 225
+ E+A++CL PMG+TSENVA RFG++R++QD A+ S +K G F+ EI+PV
Sbjct: 168 LLESEKARDCLTPMGMTSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAEIVPVT 227
Query: 226 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285
T ++D K GD+K +T+S D+G+RP+T++ LAKLKP FK G+TTAGNSSQVSDGA AVL
Sbjct: 228 TTVLDDK-GDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVL 286
Query: 286 LMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAGLQLDDIDLFEINE 345
L +RS A GLPILGV R++A VGV P +M + AGL ++DID+FEINE
Sbjct: 287 LARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINE 346
Query: 346 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 405
AFASQ VYC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E+KRRGR +GV+
Sbjct: 347 AFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVV 405
Query: 406 SMCIGTGMGAAAVFE 420
SMCIGTGMGAAAVFE
Sbjct: 406 SMCIGTGMGAAAVFE 420
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| ZFIN|ZDB-GENE-040704-48 acaa1 "acetyl-Coenzyme A acyltransferase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 984 (351.4 bits), Expect = 3.9e-99, P = 3.9e-99
Identities = 205/393 (52%), Positives = 265/393 (67%)
Query: 45 TSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGT 104
T+ +D+V+V RTA+ ++KRG FKDT PD+LL+ V+ AVI+ + PS +GD+ VG
Sbjct: 25 TAANPNDIVVVHGLRTAIGRAKRGSFKDTTPDELLSAVMSAVIKDVGLKPSLLGDVCVGN 84
Query: 105 VLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIG---- 160
VL PG+ A R+A F++GFPE+VPV TVNRQCSSGLQ G YD+G
Sbjct: 85 VLQPGAG-ALMARVAHFFSGFPESVPVYTVNRQCSSGLQALFNIAGGIRGGSYDLGLACG 143
Query: 161 -------------SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRK 207
++P++ E+A++C++PMG+TSENVA RFG+TR++QD+ A+ S +K
Sbjct: 144 VESMSLRSPNNPGDISPRLMDNEKARDCIIPMGITSENVAERFGITREKQDRFALSSQQK 203
Query: 208 XXXXXXXGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 267
G F EI PV TK V+ + G E+ +T++ DDGIRP T++ LAKL+P FK G
Sbjct: 204 AAMAQKNGIFDQEITPVTTKFVE-ENGTERTITVTKDDGIRPGTTLEGLAKLRPAFKDTG 262
Query: 268 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXX 327
+TTAGN+SQVSDGA AVL+ +RS + GLP+ GV R A VGV P +M
Sbjct: 263 STTAGNASQVSDGAAAVLIGRRSAVEKLGLPVFGVLRASAVVGVPPDVMGIGPAYAIPEA 322
Query: 328 XKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVA 387
K AGL +DDID+FEINEAFASQ VYC KLG+ EK+N NGGA+A GHPLG TGAR V
Sbjct: 323 LKLAGLTVDDIDVFEINEAFASQAVYCVEKLGIPMEKVNPNGGAIAFGHPLGCTGARQVV 382
Query: 388 TLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420
TLL+E+KRR R FGV+SMCIGTGMGAAAVFE
Sbjct: 383 TLLNELKRR-RKRGFGVVSMCIGTGMGAAAVFE 414
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| UNIPROTKB|F1NB64 ACAA1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
Identities = 206/388 (53%), Positives = 267/388 (68%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
+DVV+V RTA+ ++KRGGFKDT PD+LL+ V+ AV++ + P +GDI VG VL PG
Sbjct: 37 EDVVVVHGRRTAIGRAKRGGFKDTTPDELLSAVMTAVLQDVRLRPEVLGDICVGNVLQPG 96
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGSV------- 162
+ A R+A F +G PETVP +VNRQCSSGLQ G YDIG
Sbjct: 97 AG-ALIARVAQFLSGIPETVPCSSVNRQCSSGLQAIINIAGGIRNGSYDIGMACGVETMS 155
Query: 163 -----NP-----KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXX 212
NP + +A++CL+PMG+TSENVA +FG++RK+QD A+ S +K
Sbjct: 156 LRSGNNPGDISSSMMENSKARDCLIPMGITSENVAEKFGISRKKQDAFALASQQKAAKAQ 215
Query: 213 XXGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAG 272
G FK EI+PV T ++D + G++K +T+ D+G+RP+T++ LAKLKP FK++G+TTAG
Sbjct: 216 QMGLFKAEIVPVKTTVLDNE-GNQKTITVHQDEGVRPSTTLEGLAKLKPAFKENGSTTAG 274
Query: 273 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAG 332
N+SQVSDGA AVLL KRS AM+ GLPILGV R+FA VGV P +M + AG
Sbjct: 275 NASQVSDGAAAVLLAKRSKAMQLGLPILGVLRSFAVVGVPPDVMGIGPAYAIPVAVQKAG 334
Query: 333 LQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHE 392
L L+DID++EINEAFASQ VYC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E
Sbjct: 335 LTLNDIDIYEINEAFASQAVYCVEKLGIPMEKVNPLGGAIALGHPLGCTGARQVVTLLNE 394
Query: 393 MKRRGRDCRFGVISMCIGTGMGAAAVFE 420
+KRRG+ +GV+SMCIGTGMGAAAVFE
Sbjct: 395 LKRRGKRA-YGVVSMCIGTGMGAAAVFE 421
|
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| RGD|1562373 Acaa1b "acetyl-Coenzyme A acyltransferase 1B" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
Identities = 207/387 (53%), Positives = 263/387 (67%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DVV+V RT + ++ RGGFKDT PD+LL+ VL AV++ + P +GDI VG VL PG+
Sbjct: 37 DVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGA 96
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGSV-------- 162
A+ R+A F +G PETVP+ VNRQCSSGLQ G YDIG
Sbjct: 97 G-AAMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTL 155
Query: 163 ----NP-----KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXXX 213
NP ++ E+A++CL+PMG+TSENVA RFG++R++QD A+ S +K
Sbjct: 156 SERGNPGNISSRLLENEKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQS 215
Query: 214 XGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGN 273
G F+ EI+PV T ++D K GD K +T+S D+G+RP+T++ LAKLKP FK G+TTAGN
Sbjct: 216 KGCFRAEIVPVTTTVLDDK-GDRKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGN 274
Query: 274 SSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAGL 333
SSQVSDGA AVLL +RS A GLPILGV R++A VGV P IM + AGL
Sbjct: 275 SSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGL 334
Query: 334 QLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEM 393
++DID+FEINEAFASQ +YC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E+
Sbjct: 335 TVNDIDIFEINEAFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNEL 394
Query: 394 KRRGRDCRFGVISMCIGTGMGAAAVFE 420
KRRGR +GV+SMCIGTGMGAAAVFE
Sbjct: 395 KRRGRRA-YGVVSMCIGTGMGAAAVFE 420
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| UNIPROTKB|E2REH5 ACAA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 978 (349.3 bits), Expect = 1.7e-98, P = 1.7e-98
Identities = 206/388 (53%), Positives = 265/388 (68%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
DDVV+V RTA+ + RGGFKDT PD+LL+ V+ AV++ + P+++GDI VG VL PG
Sbjct: 38 DDVVVVHGRRTAIGRGGRGGFKDTTPDELLSAVMTAVLQDVRLSPAQLGDICVGNVLQPG 97
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGSV------- 162
+ A R+A F + PETVP+ TVNRQCSSGLQ G YDIG
Sbjct: 98 AG-AIMARIAQFLSDIPETVPLSTVNRQCSSGLQALANIAGGIRNGSYDIGMACGVESMS 156
Query: 163 -----NP-----KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXX 212
NP ++ ++A++CL+PMG+TSENVA RFG++R++QD A+ S +K
Sbjct: 157 LADRGNPGNITSRLVEKKKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQ 216
Query: 213 XXGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAG 272
G F+ EI+PV T + D K G E+ +T++ D+GIRPNT++ LAKLKP FK+ G+TTAG
Sbjct: 217 SKGCFQAEIVPVTTTVHDDK-GAERIITVAQDEGIRPNTTMEGLAKLKPAFKQGGSTTAG 275
Query: 273 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAG 332
NSSQVSDGA A+LL +RS A GLP+LGV R++A VGV P IM + AG
Sbjct: 276 NSSQVSDGAAALLLARRSKAEELGLPVLGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAG 335
Query: 333 LQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHE 392
L + D+D+FEINEAFASQ VYC KLGL PEK+N GGA+A+GHPLG TGAR V TLL+E
Sbjct: 336 LTVKDVDIFEINEAFASQAVYCVEKLGLPPEKVNPLGGAVALGHPLGCTGARQVITLLNE 395
Query: 393 MKRRGRDCRFGVISMCIGTGMGAAAVFE 420
+KRRG+ +GV+SMCIGTGMGAAAVFE
Sbjct: 396 LKRRGKRA-YGVVSMCIGTGMGAAAVFE 422
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| B6EGU1 | FADA_ALISL | 2, ., 3, ., 1, ., 1, 6 | 0.4267 | 0.8067 | 0.9276 | yes | no |
| C6DI66 | FADA_PECCP | 2, ., 3, ., 1, ., 1, 6 | 0.4260 | 0.8202 | 0.9431 | yes | no |
| P45359 | THLA_CLOAB | 2, ., 3, ., 1, ., 9 | 0.3784 | 0.8112 | 0.9209 | yes | no |
| A0KEL0 | FADA_AERHH | 2, ., 3, ., 1, ., 1, 6 | 0.4137 | 0.8112 | 0.9328 | yes | no |
| P09110 | THIK_HUMAN | 2, ., 3, ., 1, ., 1, 6 | 0.5391 | 0.9033 | 0.9481 | yes | no |
| Q8VCH0 | THIKB_MOUSE | 2, ., 3, ., 1, ., 1, 6 | 0.5471 | 0.9011 | 0.9457 | yes | no |
| Q8LF48 | THIK1_ARATH | 2, ., 3, ., 1, ., 1, 6 | 0.8093 | 0.9573 | 0.9616 | no | no |
| Q05493 | THIK_YARLI | 2, ., 3, ., 1, ., 1, 6 | 0.5357 | 0.8314 | 0.8937 | yes | no |
| Q6DAP6 | FADA_ERWCT | 2, ., 3, ., 1, ., 1, 6 | 0.4234 | 0.8202 | 0.9431 | yes | no |
| Q8CQN7 | THLA_STAES | 2, ., 3, ., 1, ., 9 | 0.4010 | 0.8067 | 0.9111 | yes | no |
| B5FEW7 | FADA_VIBFM | 2, ., 3, ., 1, ., 1, 6 | 0.4166 | 0.8067 | 0.9276 | yes | no |
| Q921H8 | THIKA_MOUSE | 2, ., 3, ., 1, ., 1, 6 | 0.5471 | 0.9011 | 0.9457 | yes | no |
| Q5E8X7 | FADA_VIBF1 | 2, ., 3, ., 1, ., 1, 6 | 0.4141 | 0.8067 | 0.9276 | yes | no |
| P44873 | ATOB_HAEIN | 2, ., 3, ., 1, ., 9 | 0.3790 | 0.8134 | 0.9211 | yes | no |
| P50174 | THIL_RHIME | 2, ., 3, ., 1, ., 9 | 0.4080 | 0.8089 | 0.9160 | yes | no |
| Q5HS07 | THLA_STAEQ | 2, ., 3, ., 1, ., 9 | 0.4010 | 0.8067 | 0.9111 | yes | no |
| P07871 | THIKB_RAT | 2, ., 3, ., 1, ., 1, 6 | 0.5473 | 0.9056 | 0.9504 | yes | no |
| Q6LW07 | FADA_PHOPR | 2, ., 3, ., 1, ., 1, 6 | 0.4005 | 0.8089 | 0.9302 | yes | no |
| Q56WD9 | THIK2_ARATH | 2, ., 3, ., 1, ., 1, 6 | 0.8565 | 0.9955 | 0.9588 | yes | no |
| B2VFE0 | FADA_ERWT9 | 2, ., 3, ., 1, ., 1, 6 | 0.4238 | 0.8157 | 0.9379 | yes | no |
| P21775 | THIKA_RAT | 2, ., 3, ., 1, ., 1, 6 | 0.5448 | 0.9011 | 0.9457 | yes | no |
| Q8SVA6 | THIK_ENCCU | 2, ., 3, ., 1, ., 1, 6 | 0.4175 | 0.8067 | 0.9181 | yes | no |
| O32177 | FADA_BACSU | 2, ., 3, ., 1, ., 1, 6 | 0.4730 | 0.8269 | 0.9411 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.998 |
| 3rd Layer | 2.3.1.16 | 0.994 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | fgenesh4_pm.C_LG_I000162 | SubName- Full=Putative uncharacterized protein; (460 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | estExt_Genewise1_v1.C_LG_XVI3692 | acyl-CoA oxidase (EC-1.3.3.6) (437 aa) | • | • | • | 0.925 | |||||
 | estExt_Genewise1_v1.C_LG_VI1706 | acyl-CoA oxidase (EC-1.3.3.6) (436 aa) | • | • | • | 0.923 | |||||
 | estExt_fgenesh4_pm.C_290034 | acyl-CoA oxidase (EC-1.3.3.6) (664 aa) | • | • | • | 0.912 | |||||
 | estExt_Genewise1_v1.C_LG_XIV3807 | acetyl-CoA C-acetyltransferase (EC-2.3.1.9) (402 aa) | • | • | • | • | 0.909 | ||||
 | grail3.0096010101 | acyl-CoA oxidase (EC-1.3.3.6) (639 aa) | • | • | • | 0.909 | |||||
 | grail3.0024004101 | acetyl-CoA C-acetyltransferase (EC-2.3.1.9) (412 aa) | • | • | • | • | 0.909 | ||||
 | fgenesh4_pg.C_LG_XIX000851 | acyl-CoA oxidase (EC-1.3.3.6) (680 aa) | • | • | 0.907 | ||||||
 | grail3.0018023901 | 3-hydroxy-3-methylglutaryl coenzyme A synthase (EC-2.3.3.10) (465 aa) | • | • | 0.906 | ||||||
 | estExt_fgenesh4_pm.C_LG_VII0199 | acyl-CoA oxidase (EC-1.3.3.6) (689 aa) | • | • | 0.906 | ||||||
 | estExt_fgenesh4_pm.C_LG_V0077 | acyl-CoA oxidase (EC-1.3.3.6) (691 aa) | • | • | 0.905 | ||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 445 | |||
| PLN02287 | 452 | PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | 0.0 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 1e-177 | |
| TIGR01930 | 386 | TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans | 1e-162 | |
| PRK05790 | 393 | PRK05790, PRK05790, putative acyltransferase; Prov | 1e-138 | |
| PRK09052 | 399 | PRK09052, PRK09052, acetyl-CoA acetyltransferase; | 1e-133 | |
| PRK07661 | 391 | PRK07661, PRK07661, acetyl-CoA acetyltransferase; | 1e-131 | |
| PRK07108 | 392 | PRK07108, PRK07108, acetyl-CoA acetyltransferase; | 1e-115 | |
| PRK08947 | 387 | PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | 1e-113 | |
| PRK09051 | 394 | PRK09051, PRK09051, beta-ketothiolase; Provisional | 1e-109 | |
| PRK06445 | 394 | PRK06445, PRK06445, acetyl-CoA acetyltransferase; | 1e-105 | |
| PRK06205 | 404 | PRK06205, PRK06205, acetyl-CoA acetyltransferase; | 1e-100 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 1e-100 | |
| PRK05656 | 393 | PRK05656, PRK05656, acetyl-CoA acetyltransferase; | 1e-96 | |
| TIGR02445 | 385 | TIGR02445, fadA, fatty oxidation complex, beta sub | 6e-93 | |
| PRK09050 | 401 | PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; | 3e-92 | |
| TIGR02430 | 400 | TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | 3e-89 | |
| PRK07851 | 406 | PRK07851, PRK07851, acetyl-CoA acetyltransferase; | 6e-89 | |
| PRK08242 | 402 | PRK08242, PRK08242, acetyl-CoA acetyltransferase; | 5e-87 | |
| PRK08235 | 393 | PRK08235, PRK08235, acetyl-CoA acetyltransferase; | 2e-86 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 1e-85 | |
| PRK08131 | 401 | PRK08131, PRK08131, acetyl-CoA acetyltransferase; | 9e-85 | |
| PRK07801 | 382 | PRK07801, PRK07801, acetyl-CoA acetyltransferase; | 8e-84 | |
| PRK13359 | 400 | PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; | 2e-82 | |
| PRK07850 | 387 | PRK07850, PRK07850, acetyl-CoA acetyltransferase; | 4e-80 | |
| PRK06633 | 392 | PRK06633, PRK06633, acetyl-CoA acetyltransferase; | 1e-79 | |
| PRK08170 | 426 | PRK08170, PRK08170, acetyl-CoA acetyltransferase; | 3e-79 | |
| PLN02644 | 394 | PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | 4e-79 | |
| PRK06504 | 390 | PRK06504, PRK06504, acetyl-CoA acetyltransferase; | 8e-78 | |
| PRK08963 | 428 | PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | 3e-76 | |
| PRK06690 | 361 | PRK06690, PRK06690, acetyl-CoA acetyltransferase; | 1e-73 | |
| PRK06025 | 417 | PRK06025, PRK06025, acetyl-CoA acetyltransferase; | 4e-64 | |
| PRK09268 | 427 | PRK09268, PRK09268, acetyl-CoA acetyltransferase; | 7e-64 | |
| PRK06954 | 397 | PRK06954, PRK06954, acetyl-CoA acetyltransferase; | 3e-62 | |
| pfam02803 | 123 | pfam02803, Thiolase_C, Thiolase, C-terminal domain | 3e-60 | |
| PRK06366 | 388 | PRK06366, PRK06366, acetyl-CoA acetyltransferase; | 6e-58 | |
| TIGR02446 | 430 | TIGR02446, FadI, fatty oxidation complex, beta sub | 1e-53 | |
| cd00826 | 393 | cd00826, nondecarbox_cond_enzymes, nondecarboxylat | 3e-49 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 1e-16 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 2e-13 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 7e-06 | |
| PRK06064 | 389 | PRK06064, PRK06064, acetyl-CoA acetyltransferase; | 4e-05 | |
| PRK07516 | 389 | PRK07516, PRK07516, acetyl-CoA acetyltransferase; | 7e-05 | |
| PRK06289 | 403 | PRK06289, PRK06289, acetyl-CoA acetyltransferase; | 0.001 | |
| PRK12578 | 385 | PRK12578, PRK12578, acetyl-CoA acetyltransferase; | 0.002 | |
| PRK07937 | 352 | PRK07937, PRK07937, lipid-transfer protein; Provis | 0.002 | |
| cd00830 | 320 | cd00830, KAS_III, Ketoacyl-acyl carrier protein sy | 0.002 | |
| PRK08256 | 391 | PRK08256, PRK08256, lipid-transfer protein; Provis | 0.004 |
| >gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 851 bits (2201), Expect = 0.0
Identities = 377/455 (82%), Positives = 414/455 (90%), Gaps = 21/455 (4%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ+VLL HLRPS+S S LSASACAAGDSAAYHRT+ +GDDVVIVAAYRT
Sbjct: 1 MEKAINRQRVLLRHLRPSSS----EPSSLSASACAAGDSAAYHRTTAFGDDVVIVAAYRT 56
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
+CK+KRGGFKDTYPDDLLAPVLKAV+EKT ++PSEVGDIVVGTVLAPGSQRA+ECRMAA
Sbjct: 57 PICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAA 116
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVN 163
FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG VN
Sbjct: 117 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVN 176
Query: 164 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 223
P+V++F QAQ+CLLPMG+TSENVA RFGVTR+EQDQAAV+SHRKAAAATA+GKFKDEI+P
Sbjct: 177 PRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVP 236
Query: 224 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283
V TKIVDPKTG+EKP+ ISVDDGIRPNT++++LAKLKPVFKK+GTTTAGNSSQVSDGAGA
Sbjct: 237 VHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGA 296
Query: 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343
VLLMKRSVAM+KGLPILGVFR+FAAVGVDPA+MG+GPAVAIPAAVK+AGL+LDDIDLFEI
Sbjct: 297 VLLMKRSVAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEI 356
Query: 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 403
NEAFASQFVYC KLGLDPEK+NVNGGA+A+GHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 357 NEAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFG 416
Query: 404 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNN 438
V+SMCIGTGMGAAAVFERGD DEL N RKVE NN
Sbjct: 417 VVSMCIGTGMGAAAVFERGDSVDELSNARKVEGNN 451
|
Length = 452 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 501 bits (1293), Expect = e-177
Identities = 199/396 (50%), Positives = 253/396 (63%), Gaps = 37/396 (9%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
VIV+A RT + + G KD DDL A V+KA++E+ +DP EV D+++G VL G +
Sbjct: 1 VIVSAVRTPIGRFG-GALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAG-EG 58
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG--------SVNP 164
+ R AA AG PE+VP TVNR C SGLQAVA A +I AG D+ S P
Sbjct: 59 QNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAP 118
Query: 165 -------------------KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205
+ L MG+T+ENVA ++G++R+EQD+ A+ SH
Sbjct: 119 YLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSH 178
Query: 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 265
++AAAA AG+FKDEI+PV G + PV + D+G RP+T++ +LAKLKP FKK
Sbjct: 179 QRAAAAQEAGRFKDEIVPVEVP------GRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKK 232
Query: 266 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIP 325
DGT TAGN+S ++DGA AVLLM A GL L +A GVDPAIMG+GP AIP
Sbjct: 233 DGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIP 292
Query: 326 AAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARC 385
A+K AGL LDDIDL EINEAFA+Q + C +LGLDPEK+NVNGGA+A+GHPLG +GAR
Sbjct: 293 KALKRAGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARI 352
Query: 386 VATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
V TLLHE+KRRG R+G+ +MCIG G GAA V ER
Sbjct: 353 VVTLLHELKRRG--GRYGLATMCIGGGQGAAMVIER 386
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Score = 462 bits (1192), Expect = e-162
Identities = 188/396 (47%), Positives = 244/396 (61%), Gaps = 39/396 (9%)
Query: 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA 113
IVAA RT + K G KD +DL A V+K ++E+ +DP + D++ G VL G Q
Sbjct: 1 IVAAARTPIGKFG-GSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQ-Q 58
Query: 114 SECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------------- 160
+ R AA AG PE+VP TVNRQC+SGLQAV A I+AG D+
Sbjct: 59 NIARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPY 118
Query: 161 --------SVNPKVKAFEQAQNCL--------LPMGVTSENVAHRFGVTRKEQDQAAVDS 204
V P E L MG+T+EN+A ++G++R+EQD+ A+ S
Sbjct: 119 SVPRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGISREEQDEYALRS 178
Query: 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 264
H++AA A G FKDEI+PV + K PV +S D+GIRPNT++ +LAKLKP F
Sbjct: 179 HQRAAKAWEEGLFKDEIVPV--SVKGRK----GPVVVSSDEGIRPNTTLEKLAKLKPAFD 232
Query: 265 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAI 324
+GT TAGNSS ++DGA A+LLM A GL L ++A GVDP IMG+GP AI
Sbjct: 233 PNGTVTAGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDPEIMGLGPVPAI 292
Query: 325 PAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGAR 384
P A+K AGL + DIDLFEINEAFA+Q + C +LGLD EK+NVNGGA+A+GHPLG +GAR
Sbjct: 293 PKALKKAGLSISDIDLFEINEAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGAR 352
Query: 385 CVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420
V TLLHE+KRRG R+G+ ++CIG G G A + E
Sbjct: 353 IVTTLLHELKRRGG--RYGLATICIGGGQGIAVILE 386
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386 |
| >gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 401 bits (1034), Expect = e-138
Identities = 181/405 (44%), Positives = 246/405 (60%), Gaps = 47/405 (11%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
DVVIV+A RT + K G KD +L A V+KA +E+ V P +V ++++G VL G
Sbjct: 2 KDVVIVSAARTPIGKFG-GALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAG 60
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---GSV---- 162
+ + + R AA AG P VP T+N+ C SGL+AVA A AI+AG DI G
Sbjct: 61 AGQ-NPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMS 119
Query: 163 ----------------NPKVK----------AFEQAQNCLLPMGVTSENVAHRFGVTRKE 196
+ ++ AF MG+T+EN+A ++G+TR+E
Sbjct: 120 QAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNG-----YHMGITAENLAEQYGITREE 174
Query: 197 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 256
QD+ A+ S +KA AA AG+FKDEI+PV K + GD PV + D+ RP+T+ L
Sbjct: 175 QDEFALASQQKAEAAIKAGRFKDEIVPVTIKQ---RKGD--PVVVDTDEHPRPDTTAESL 229
Query: 257 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM 316
AKL+P F KDGT TAGN+S ++DGA AV++M + A GL L ++A GVDPAIM
Sbjct: 230 AKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIM 289
Query: 317 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 376
G+GP AI A++ AG L D+DL EINEAFA+Q + +LGLDPEK+NVNGGA+A+GH
Sbjct: 290 GIGPVPAIRKALEKAGWSLADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGH 349
Query: 377 PLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
P+G +GAR + TLLHEMKRRG + G+ ++CIG G G A + ER
Sbjct: 350 PIGASGARILVTLLHEMKRRG--AKKGLATLCIGGGQGVALIVER 392
|
Length = 393 |
| >gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 389 bits (1002), Expect = e-133
Identities = 181/396 (45%), Positives = 248/396 (62%), Gaps = 29/396 (7%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
D IVAA RT + K+ RG FK+T PDDLLA VL++ + + +DP + D +VG +
Sbjct: 7 DAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEA 66
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG--------- 160
Q + R+ A AG P +V TVNR C+SGLQAVA A I+ G D+
Sbjct: 67 EQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMS 126
Query: 161 ---------SVNPKVKAFEQAQNCLLP--MGVTSENVAHRFGVTRKEQDQAAVDSHRKAA 209
S++P + F + +N + MG+T+E VA ++ V+R++QD A++SH+KA
Sbjct: 127 MVPMMGNKPSMSPAI--FARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAI 184
Query: 210 AATAAGKFKDEIIP--VATKIVDPKTG--DEKPVTISVDDGIRPNTSVSELAKLKPVFKK 265
AA AG+FKDEI P + + D TG D K T+ +D+G R +TS+ LAKLKPVF
Sbjct: 185 AAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFAN 244
Query: 266 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIP 325
G+ TAGNSSQ SDGAGAV+L+ + L L F +FA GV P IMG+GP AIP
Sbjct: 245 KGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIP 304
Query: 326 AAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARC 385
AA+K AGL+ DD+D E+NEAFA+Q + LGLDP K+N GGA+A+GHPLG TGA
Sbjct: 305 AALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIR 364
Query: 386 VATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
AT++H ++R ++G+++MC+GTGMGAA +FER
Sbjct: 365 TATVVHGLRRTNL--KYGMVTMCVGTGMGAAGIFER 398
|
Length = 399 |
| >gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 384 bits (987), Expect = e-131
Identities = 178/388 (45%), Positives = 237/388 (61%), Gaps = 21/388 (5%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
VIVA RT + K+K+G K PDDL A V+K +++ + D+++G + Q
Sbjct: 5 VIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQG 64
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI------------- 159
+ R AG P TVP T+NR CSSGLQ++A A I G +
Sbjct: 65 LNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVP 124
Query: 160 ---GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 216
V P + E A + MG T+E VA ++G++R++QD AV SH++AA A A GK
Sbjct: 125 MMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISREDQDAFAVRSHQRAAKALAEGK 184
Query: 217 FKDEIIPV---ATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGN 273
F DEI+PV + + E+ +T S D+G+R +T++ L KL+P F G+ TAGN
Sbjct: 185 FADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGN 244
Query: 274 SSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGL 333
SSQ+SDGA AVLLM R A GL L FR+FA GV P +MG+GP AIP A+K AGL
Sbjct: 245 SSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGL 304
Query: 334 QLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEM 393
+L DI LFE+NEAFASQ + +LGLD EK+NVNGGA+A+GHPLG TGA+ +L+HEM
Sbjct: 305 ELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEM 364
Query: 394 KRRGRDCRFGVISMCIGTGMGAAAVFER 421
KRR +FG+++MCIG GMGAA VFE
Sbjct: 365 KRRNE--QFGIVTMCIGGGMGAAGVFEL 390
|
Length = 391 |
| >gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 343 bits (881), Expect = e-115
Identities = 173/392 (44%), Positives = 241/392 (61%), Gaps = 26/392 (6%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
+ VIV+ RT L KS RG F T+ L V++ +E+ +DP+EV D+++G G+
Sbjct: 3 EAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGA 62
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFE 170
A+ R A AG P TVP TVNR CSSGLQ +A A + AG D+ V V++
Sbjct: 63 TGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDV-FVAGGVESIS 121
Query: 171 QAQNCL------------------LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 212
QN + M T+ENVA R+G++++ QD+ V S ++AAAA
Sbjct: 122 CVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVAKRYGISKERQDEYGVQSQQRAAAAQ 181
Query: 213 AAGKFKDEIIP--VATKIVDPKTGD--EKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 268
AAG+F DEI+P V + D TG K VT+S D+GIRP+T++ ++K++ G
Sbjct: 182 AAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSALP-GGV 240
Query: 269 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAV 328
TAGN+SQ SDGA A ++M VA R+GL LG+FR FA G +P MG+GP A+P +
Sbjct: 241 ITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLL 300
Query: 329 KSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVAT 388
K AGL++DDIDL+E+NEAFA Q +YCR+ LG+ +++NVNGGA+A+GHP G +GAR
Sbjct: 301 KQAGLKVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGH 360
Query: 389 LLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420
L E KRRG ++ V++MCIG G GAA +FE
Sbjct: 361 ALIEGKRRG--AKYVVVTMCIGGGQGAAGLFE 390
|
Length = 392 |
| >gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 338 bits (868), Expect = e-113
Identities = 168/394 (42%), Positives = 230/394 (58%), Gaps = 33/394 (8%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
DVVIV A RT + +SK G F++ +DL A ++++++ + +DP+E+ DI+ G V
Sbjct: 3 DVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTL 62
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAG---FYDIGSV---- 162
Q + R AA AG P +VP TVNR C S +QA+ D A AI G + IG V
Sbjct: 63 EQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMG 122
Query: 163 ----------NPKV-KAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 211
+P + K +A MG+T+E + G++R++QD A SH++A AA
Sbjct: 123 HVPMNHGVDFHPGLSKNVAKAAGM---MGLTAEMLGKMHGISREQQDAFAARSHQRAWAA 179
Query: 212 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK-KDGTTT 270
T G+FK+EIIP + D D+ IRP T+V LA L+P F +GT T
Sbjct: 180 TQEGRFKNEIIPT-----EGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVT 234
Query: 271 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKS 330
AG SS +SDGA A+L+M S A GL R+ A G DP+IMG GP A A+K
Sbjct: 235 AGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKR 294
Query: 331 AGLQLDDIDLFEINEAFASQFVYCRNKLGL---DPEKINVNGGALAIGHPLGTTGARCVA 387
AGL + DID+FE+NEAFA+Q + C LGL EK+N+NGGA+A+GHPLG +GAR
Sbjct: 295 AGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARIST 354
Query: 388 TLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
TLL+ M+R +D +FG+ +MCIG G G A VFER
Sbjct: 355 TLLNLMER--KDAQFGLATMCIGLGQGIATVFER 386
|
Length = 387 |
| >gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Score = 326 bits (839), Expect = e-109
Identities = 165/403 (40%), Positives = 231/403 (57%), Gaps = 45/403 (11%)
Query: 51 DVVIVAAYRTALCKSKRGGF----KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVL 106
+VV+V+ RTA+ G F KD P DL A V++ + + VDP +VG +V G V+
Sbjct: 4 EVVVVSGVRTAI-----GTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVI 58
Query: 107 APGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------ 160
+ R+AA AG P+ P VNR C SGLQA+ A AI G D+
Sbjct: 59 PTEPRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAE 118
Query: 161 --SVNP-------------KVKAFEQAQNCL------LPMGVTSENVAHRFGVTRKEQDQ 199
S P K + L + MGVT+ENVA ++G++R+ QD
Sbjct: 119 SMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVTAENVAAKYGISREAQDA 178
Query: 200 AAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 259
A++SHR+AAAA AAG FKD+I+PV K + G+ V D+ +R +T++ +LAKL
Sbjct: 179 LALESHRRAAAAIAAGYFKDQIVPVEIKT---RKGE---VVFDTDEHVRADTTLEDLAKL 232
Query: 260 KPVFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV 318
KPVFKK+ GT TAGN+S ++DGA AV+L + A +GL L +A GVDP MG+
Sbjct: 233 KPVFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGI 292
Query: 319 GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPL 378
GP A A++ AGL + D+D+ E NEAFA+Q +LGLDP K+N NG +++GHP+
Sbjct: 293 GPVPATQKALERAGLTVADLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPV 352
Query: 379 GTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
G TGA L+E++R G R+ +++MCIG G G AA+FER
Sbjct: 353 GATGAIITVKALYELQRIGG--RYALVTMCIGGGQGIAAIFER 393
|
Length = 394 |
| >gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 316 bits (811), Expect = e-105
Identities = 159/400 (39%), Positives = 222/400 (55%), Gaps = 36/400 (9%)
Query: 50 DDVVIVAAYRTALCKSK-----RGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGT 104
+DV +V RTA + + + F + P++L A ++ +IEKT + P E+ DI+ G
Sbjct: 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGC 61
Query: 105 VLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---GS 161
L G R F A P +P V+RQC+S L V+ A I G DI G
Sbjct: 62 ALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGG 121
Query: 162 V----------------NPKVKAFEQAQNCLLP----MGVTSENVAHRFGVTRKEQDQAA 201
V NPK+ + L MG+T+E +A G+ R+E D+ +
Sbjct: 122 VEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWS 181
Query: 202 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261
+ SH+ AA A G FKDEI+P+ ++ + K + VD +RP+TS+ +LAKL P
Sbjct: 182 LRSHQLAAKAIQEGYFKDEILPIEVEV------EGKKKVVDVDQSVRPDTSLEKLAKLPP 235
Query: 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPA 321
FK DG TAGNSS ++ GA VLLM + + GL + R+F GV PAIMG GP
Sbjct: 236 AFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPV 295
Query: 322 VAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTT 381
A A++ AGL + DIDL+EINEAFA +Y +LGLDPE +N+ GGA+AIGHPLG T
Sbjct: 296 PASKKALEKAGLSVKDIDLWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGAT 355
Query: 382 GARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
GAR V TL +++ +G+D +GV ++C+G G G A V ER
Sbjct: 356 GARIVGTLARQLQIKGKD--YGVATLCVGGGQGGAVVLER 393
|
Length = 394 |
| >gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 306 bits (785), Expect = e-100
Identities = 157/409 (38%), Positives = 225/409 (55%), Gaps = 47/409 (11%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
D VI RT + + G FKD ++L A V++A++E+T +DP+ + D++ G P
Sbjct: 3 DAVICEPVRTPVGRFG-GAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGY-PNG 60
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI----------- 159
+ + R+AA AG P TVP ++R+C SGLQAV A ++ G D+
Sbjct: 61 EAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSN 120
Query: 160 --------------GSVNPK---VKAFEQAQNCLLP----MGVTSENVAHRFGVTRKEQD 198
G V + E A P M T+EN+ +G++R+EQD
Sbjct: 121 VEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGISREEQD 180
Query: 199 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 258
AV SH++A AA AG+F DEI+PV V + GD P + D+ R +T++ LAK
Sbjct: 181 ALAVRSHQRAVAAQEAGRFDDEIVPVT---VPQRKGD--PTVVDRDEHPRADTTLESLAK 235
Query: 259 LKPVFKK---DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI 315
L+P+ K + T TAGN+S +D A A L+ A GL L ++A GV+P+
Sbjct: 236 LRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSR 295
Query: 316 MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL---DPEKINVNGGAL 372
MG+GP A A+ AGL LDDIDL E+NEAFA+Q + + G D E++NVNG +
Sbjct: 296 MGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGI 355
Query: 373 AIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
++GHP+G TG R +ATLL E++R R R+G+ +MCIG G G AAVFER
Sbjct: 356 SLGHPVGATGGRILATLLRELQR--RQARYGLETMCIGGGQGLAAVFER 402
|
Length = 404 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 303 bits (779), Expect = e-100
Identities = 153/405 (37%), Positives = 211/405 (52%), Gaps = 46/405 (11%)
Query: 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT--NVDPSEVGDIVVGTVL 106
DV IV A RT K G + + L A ++ A +E+ +VD ++V D+++G VL
Sbjct: 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVL 60
Query: 107 APGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI------- 159
G Q + R AA AG P +VP TVNR C+SGL AV A AI +G D+
Sbjct: 61 QAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVE 120
Query: 160 ----------------GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVD 203
+V+P + MG+T+E A R+G++R++QD+ AV
Sbjct: 121 KMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDEVAVK 180
Query: 204 SHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTS-VSE-LAKLKP 261
SH+ AAA AG F DEI P D + D R + S S+ A L P
Sbjct: 181 SHKNAAANPKAGFF-DEITPE----------DVLNSPVVADPLRRLDCSPTSDGAAALVP 229
Query: 262 VFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGP 320
F++ GT TAGN+S ++DGA A+LLM S A GL L R +A GVDP+IM GP
Sbjct: 230 AFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGP 288
Query: 321 AVAIPAAVKSAGLQ-LDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLG 379
A+ A+ AGL L+D+ L E EAFA+ + LG P +N +GGA+A+GHP+G
Sbjct: 289 VAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKILGDLP--VNPSGGAIALGHPIG 346
Query: 380 TTGARCVATLLHEMKRRG--RDCRFGVISMCIG-TGMGAAAVFER 421
TGAR + L +++ RG R G+ ++CIG G G AAV ER
Sbjct: 347 ATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQGVAAVLER 391
|
Length = 392 |
| >gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 295 bits (756), Expect = 1e-96
Identities = 162/400 (40%), Positives = 236/400 (59%), Gaps = 37/400 (9%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DVVIVAA RTA+ S +G + +L A V++ ++E+T +DP++V ++++G VL G+
Sbjct: 3 DVVIVAATRTAI-GSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI--------GSV 162
+ + R AA AG P +VP T+N+ C SGL+A+ A AI+ G ++ S+
Sbjct: 62 GQ-NPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSL 120
Query: 163 NPKV---------KAFEQAQNCLLP-----------MGVTSENVAHRFGVTRKEQDQAAV 202
P V Q + ++ MG+T+EN+ ++G++R+ QD A
Sbjct: 121 APYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAA 180
Query: 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 262
S +KA AA AG+F DEI P+ ++ + G+ P+ + D+ R T+ LAKLKP
Sbjct: 181 ASQQKAVAAIEAGRFDDEITPI---LIPQRKGE--PLAFATDEQPRAGTTAESLAKLKPA 235
Query: 263 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAV 322
FKKDG+ TAGN+S ++DGA AVLLM + A GLP+L +A GVDPAIMG+GP
Sbjct: 236 FKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVS 295
Query: 323 AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTG 382
A + AG L ++DL E NEAFA+Q + +LG D K+NVNGGA+A+GHP+G +G
Sbjct: 296 ATRRCLDKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASG 355
Query: 383 ARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 422
R + TLLHEM R RD + G+ ++CIG G G A ER
Sbjct: 356 CRVLVTLLHEMIR--RDAKKGLATLCIGGGQGVALAIERD 393
|
Length = 393 |
| >gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Score = 285 bits (731), Expect = 6e-93
Identities = 166/391 (42%), Positives = 217/391 (55%), Gaps = 27/391 (6%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPG 109
DVVIV RT + +SK G F++T +DL A ++ ++ + VDP+EV DI G V
Sbjct: 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---------- 159
Q + R AA A P T TVNR C S +QA+ D A AI G D+
Sbjct: 61 EQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMG 120
Query: 160 -----GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 214
V+ MG+T+E + G++R++QD A SH +A AAT
Sbjct: 121 HVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMHGISREQQDAFAARSHARAHAATQE 180
Query: 215 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK-KDGTTTAGN 273
GKFK+EIIP D G K D+ IRP T+V LA L+P F K+GT TAG
Sbjct: 181 GKFKNEIIPTQGHDAD---GFLK--QFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGT 235
Query: 274 SSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGL 333
SS +SDGA A+L+M A GL R+ A G DP+IMG GP A A+K AGL
Sbjct: 236 SSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGL 295
Query: 334 QLDDIDLFEINEAFASQFVYCRNKLGL---DPEKINVNGGALAIGHPLGTTGARCVATLL 390
+ DID+FE+NEAFA+Q + C LGL EK+N+NGGA+A+GHPLG +GAR TLL
Sbjct: 296 SISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLL 355
Query: 391 HEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+ M++ +D FG+ +MCIG G G A VFER
Sbjct: 356 NLMEQ--KDATFGLATMCIGLGQGIATVFER 384
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 385 |
| >gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Score = 284 bits (728), Expect = 3e-92
Identities = 161/397 (40%), Positives = 215/397 (54%), Gaps = 58/397 (14%)
Query: 68 GGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126
G DDL A LKA++ + VD V D++ G G + RM+A AG P
Sbjct: 19 GALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLP 78
Query: 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAG------------------------------- 155
+VP T+NR C SG+ AV A AIKAG
Sbjct: 79 VSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQA 138
Query: 156 -FYD--IG--SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210
+D IG VNP +KA Q + M T+ENVA + ++R +QD A+ S ++AAA
Sbjct: 139 EIFDTTIGWRFVNPLMKA----QYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAA 194
Query: 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTT 270
A AAG +EI+PV + K GD PV + D+ RP T++ LAKLKPVF+ DGT T
Sbjct: 195 AQAAGFLAEEIVPVT---IPQKKGD--PVVVDRDEHPRPETTLEALAKLKPVFRPDGTVT 249
Query: 271 AGNSSQVSDGAGAVLLMKRSVAMRKGLP----ILGVFRTFAAVGVDPAIMGVGPAVAIPA 326
AGN+S V+DGA A+LL + A + GL ILG A GV+P IMG+GPA A
Sbjct: 250 AGNASGVNDGAAALLLASEAAAKKHGLTPRARILG----MATAGVEPRIMGIGPAPATRK 305
Query: 327 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGGALAIGHPLGTTGAR 384
+ GL +D D+ E+NEAFA+Q + +LGL D ++N NGGA+A+GHPLG +GAR
Sbjct: 306 LLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGAR 365
Query: 385 CVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
V T LH+++R G R+ + +MCIG G G A ER
Sbjct: 366 LVLTALHQLERTGG--RYALCTMCIGVGQGIALAIER 400
|
Length = 401 |
| >gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 276 bits (708), Expect = 3e-89
Identities = 156/410 (38%), Positives = 215/410 (52%), Gaps = 51/410 (12%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
+ I A RT + + G DDL A +KA++ + +D + + D++ G G
Sbjct: 2 EAYICDAIRTPIGRYG-GSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAG 60
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYD----------- 158
+ RMAA AG P +VP TVNR C SGL A+ A AIKAG D
Sbjct: 61 EDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMS 120
Query: 159 -----------------------IG--SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVT 193
IG +NP +KA + M T+ENVA FG++
Sbjct: 121 RAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKA----LYGVDSMPETAENVAEEFGIS 176
Query: 194 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSV 253
R++QD A+ S ++ AAA A+G F +EI+PV + K G+ P + D+ RP T++
Sbjct: 177 REDQDAFALRSQQRTAAAQASGFFAEEIVPVV---IPQKKGE--PTVVDQDEHPRPETTL 231
Query: 254 SELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP 313
LAKLKPV + DGT TAGN+S V+DGA A+LL R GL A GV+P
Sbjct: 232 EGLAKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEP 291
Query: 314 AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGGA 371
IMG+GP A + AGL +D D+ E+NEAFA+Q + +LGL D ++N NGGA
Sbjct: 292 RIMGIGPVPATQKLLARAGLSIDQFDVIELNEAFAAQALAVLRELGLADDDARVNPNGGA 351
Query: 372 LAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+A+GHPLG +GAR V T L +++R G R+ + +MCIG G G A ER
Sbjct: 352 IALGHPLGASGARLVLTALRQLERSGG--RYALCTMCIGVGQGIALAIER 399
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. Length = 400 |
| >gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 275 bits (706), Expect = 6e-89
Identities = 156/417 (37%), Positives = 224/417 (53%), Gaps = 61/417 (14%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
+ VIV+ R+ + ++ +G KD PDDL A +++A ++K +DP+++ D+++G L G
Sbjct: 3 EAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGG 62
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---------- 159
Q + R+ A G+ +P TVNR CSS LQ AIKAG D+
Sbjct: 63 EQGFNMARVVAVLLGYD-FLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVS 121
Query: 160 -----------GSVNPKVKAFEQAQ-------------------NCLLP-----MGVTSE 184
+ NP F +AQ + LLP MG T+E
Sbjct: 122 RFAKGNSDSLPDTKNP---LFAEAQARTAARAEGGAEAWHDPREDGLLPDVYIAMGQTAE 178
Query: 185 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 244
NVA G++R+EQD+ V S +A A A G F+ EI PV +S D
Sbjct: 179 NVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLP---------DGTVVSTD 229
Query: 245 DGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFR 304
DG R T+ ++++LKPVF+ DGT TAGN+ ++DGA AV++M + A GL L
Sbjct: 230 DGPRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIV 289
Query: 305 TFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK 364
+ G+ P IMG+GP A A+ AG+ +DDIDL EINEAFA+Q + +LG+D +K
Sbjct: 290 STGVSGLSPEIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDEDK 349
Query: 365 INVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+NV+GGA+A+GHP G TGAR TLL+ + + D FG+ +MC+G G G A V ER
Sbjct: 350 LNVSGGAIALGHPFGMTGARITTTLLNNL--QTHDKTFGLETMCVGGGQGMAMVLER 404
|
Length = 406 |
| >gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Score = 270 bits (694), Expect = 5e-87
Identities = 150/414 (36%), Positives = 216/414 (52%), Gaps = 58/414 (14%)
Query: 51 DVVIVAAYRTALCKSKRGG-FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
+ I A RT K K+ G + P L A +L+A+ ++ +D + V D+V+G V G
Sbjct: 3 EAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVG 62
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYD----------- 158
Q A R A AG PETVP +NR C+SGL+AV AA +++G+ D
Sbjct: 63 DQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMS 122
Query: 159 ---IGS------VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAA 209
+GS ++P +P G++++ +A ++G +R++ D AV+S ++AA
Sbjct: 123 RVPMGSDGGAWAMDPST----NFPTYFVPQGISADLIATKYGFSREDVDAYAVESQQRAA 178
Query: 210 AATAAGKFKDEIIPVATKIVDPKTGDEKPVTI-SVDDGIRPNTSVSELAKLKPVFKKDGT 268
AA A G F ++PV D+ +TI D+ +RP T++ LAKLKP F G
Sbjct: 179 AAWAEGYFAKSVVPVK---------DQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGE 229
Query: 269 T---------------------TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFA 307
AGNSS + DGA AVL+ GL A
Sbjct: 230 MGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATA 289
Query: 308 AVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINV 367
+G DP IM GP A A+ AGL +DDIDLFE+NEAFAS + L + +K+NV
Sbjct: 290 TIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKVNV 349
Query: 368 NGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
NGGA+A+GHPLG TGA + T+L E++RRG+ R +I++C+G GMG A + ER
Sbjct: 350 NGGAIAMGHPLGATGAMILGTVLDELERRGK--RTALITLCVGGGMGIATIIER 401
|
Length = 402 |
| >gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 268 bits (688), Expect = 2e-86
Identities = 150/402 (37%), Positives = 215/402 (53%), Gaps = 49/402 (12%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS-Q 111
VIV+A RT K G KD +L +K +E+ NV +V ++++GTVL G Q
Sbjct: 5 VIVSAARTPFGKFG-GSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQ 63
Query: 112 RASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---GSVN----- 163
S R AA AG P V TVN+ C+SGL+AV I+AG + G +
Sbjct: 64 IPS--RQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNA 121
Query: 164 ----PKVK---------------------AFEQAQNCLLPMGVTSENVAHRFGVTRKEQD 198
P + AF MGV VA G++R+ QD
Sbjct: 122 PYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVH-----MGVYGGEVAKELGISREAQD 176
Query: 199 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 258
+ A SH++A +A G+F++EI+PV + + GD P+ ++ D+ R +T++ +LAK
Sbjct: 177 EWAYRSHQRAVSAHEEGRFEEEIVPVT---IPQRKGD--PIVVAKDEAPRKDTTIEKLAK 231
Query: 259 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV 318
LKPVF K GT TAGN+ V+DGA A++LM A ++G L A+ V+
Sbjct: 232 LKPVFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPR 291
Query: 319 GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPL 378
P AI A ++ G ++DIDLFEINEAFA+ + G+DPEK+NVNGGA+A+GHP+
Sbjct: 292 TPGYAINALLEKTGKTVEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPI 351
Query: 379 GTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420
G +GAR + TL+HE+KRRG G+ ++C G G G A + E
Sbjct: 352 GASGARIIVTLIHELKRRGGG--IGIAAICSGGGQGDAVLIE 391
|
Length = 393 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 262 bits (671), Expect = 1e-85
Identities = 115/269 (42%), Positives = 154/269 (57%), Gaps = 36/269 (13%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DVVIV+A RT + S G KD DL A +KA +E+ V P +V ++++G VL G
Sbjct: 1 DVVIVSAARTPI-GSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGE 59
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG--------SV 162
+ R AA AG P++VP T+N+ C SGL+AVA A AI+AG DI S
Sbjct: 60 G-QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESMSN 118
Query: 163 NP--------------------KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202
P +K L+ MG+T+ENVA ++G++R+EQD+ A+
Sbjct: 119 APYVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISREEQDEFAL 178
Query: 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 262
S +KAAAA AGKFKDEI+PV K KP+ + D+GIRP T++ LAKLKP
Sbjct: 179 RSQQKAAAAQKAGKFKDEIVPVTI-----KGRKGKPLVVDKDEGIRPGTTLESLAKLKPA 233
Query: 263 FKKD-GTTTAGNSSQVSDGAGAVLLMKRS 290
F K+ GT TAGN+S ++DGA AVLLM S
Sbjct: 234 FDKENGTVTAGNASGLNDGAAAVLLMSES 262
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 265 bits (678), Expect = 9e-85
Identities = 155/407 (38%), Positives = 216/407 (53%), Gaps = 46/407 (11%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
D I R+ + G PDDL A V++ ++EK+ ++ D+++G G
Sbjct: 3 DAYIYDGLRSPFGRHA-GALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGE 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAG--------------- 155
+ R A AG P TVP +TVNR C+SGL AV D A AI G
Sbjct: 62 DSRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSR 121
Query: 156 -----------------FYD--IGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKE 196
+D IG+ P K Q N +P T +NVA FG++R++
Sbjct: 122 APFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPE--TGDNVAAEFGISRED 179
Query: 197 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 256
D+ A S K AA G F DEI P+ P+ P ++ D+ RP+++V L
Sbjct: 180 ADRFAAQSQAKYQAAKEEGFFADEITPIEV----PQGRKLPPKLVAEDEHPRPSSTVEAL 235
Query: 257 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM 316
KLKP+F+ G TAGN+S ++DGA A+L+ R+ + GL + + AA GV+P IM
Sbjct: 236 TKLKPLFE-GGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIM 294
Query: 317 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGGALAI 374
G+GP AI A+ AGL LDD+D+ EINEAFASQ + C LG+ D ++N NGGA+A+
Sbjct: 295 GIGPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAV 354
Query: 375 GHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
GHPLG +GAR T E++RRG+ R+ V+S+CIG G G A V ER
Sbjct: 355 GHPLGASGARLALTAARELQRRGK--RYAVVSLCIGVGQGLAMVIER 399
|
Length = 401 |
| >gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 261 bits (670), Expect = 8e-84
Identities = 147/395 (37%), Positives = 208/395 (52%), Gaps = 46/395 (11%)
Query: 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA 113
IV A RT + K ++GG +P DL A VLK ++++T +DP+ V D++ G V G Q
Sbjct: 6 IVDAVRTPVGK-RKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAG 64
Query: 114 SECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI----GSVNPKVKAF 169
+ R + AG PE VP TV+RQC S QA+ A A+ +G D+ G N
Sbjct: 65 NIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPI 124
Query: 170 EQAQNCLLPMGVT-----SENVAHRFG------------------VTRKEQDQAAVDSHR 206
A +G T S+ HR+G ++R+E ++ A++SHR
Sbjct: 125 SSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFALESHR 184
Query: 207 KAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 266
+A AA AG+F +EI+PV ++VD+G R TS+ ++A LKP+ +
Sbjct: 185 RAFAAIRAGRFDNEIVPVG--------------GVTVDEGPR-ETSLEKMAGLKPLV-EG 228
Query: 267 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPA 326
G TA +SQ+SDGA AVLL R GL + G DP M P A
Sbjct: 229 GRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRY 288
Query: 327 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCV 386
A++ GL +DDID+ EINEAFA + + G DP K+N NGGA+A+GHPLG TGA+ +
Sbjct: 289 ALEKTGLSIDDIDVVEINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLM 348
Query: 387 ATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
TLLHE++R G R+G+ +MC G G + ER
Sbjct: 349 TTLLHELERTGG--RYGLQTMCEGGGTANVTIIER 381
|
Length = 382 |
| >gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 259 bits (663), Expect = 2e-82
Identities = 156/410 (38%), Positives = 213/410 (51%), Gaps = 52/410 (12%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPG 109
+ I A RT + + G DDL A LKA++E+ +VD + + D++ G G
Sbjct: 3 EAFICDAIRTPIGRYG-GALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAG 61
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAG-------------- 155
+ RM+ AG P VP T+NR C SG+ AV A AIK+G
Sbjct: 62 EDNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMS 121
Query: 156 ------------------FYD--IG--SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVT 193
+D IG VNP +K + M T+ENVA + V+
Sbjct: 122 RAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQ----LYGVDSMPETAENVATDYNVS 177
Query: 194 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSV 253
R +QD A+ S +KAA A A G EI+PV + K GD P+ +S D+ R T++
Sbjct: 178 RADQDAFALRSQQKAARAQADGTLAQEIVPVT---IPQKKGD--PLVVSRDEHPRE-TTL 231
Query: 254 SELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP 313
LAKLK V + DGT TAGN+S V+DGA A+LL + A R GL A GV+P
Sbjct: 232 EALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEP 291
Query: 314 AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGGA 371
+MG+GPA A + G+ LD D+ E+NEAFASQ + +LGL D ++N NGGA
Sbjct: 292 RVMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGGA 351
Query: 372 LAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+A+GHPLG +GAR V T L++++R G RF + +MCIG G G A ER
Sbjct: 352 IALGHPLGASGARLVTTALYQLERTGG--RFALCTMCIGVGQGIAIAIER 399
|
Length = 400 |
| >gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 252 bits (646), Expect = 4e-80
Identities = 144/395 (36%), Positives = 205/395 (51%), Gaps = 39/395 (9%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
VIV A RT + K + G + +LL V +AV+++ +DP +V ++ G V G Q
Sbjct: 5 VIVEAVRTPIGK-RNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQS 63
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQA 172
+ R A +AG P V T++ QC S QA VA I AG D+G + V+A +
Sbjct: 64 NNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVG-IACGVEAMSRV 122
Query: 173 QNCLLPMG-----------------------VTSENVAHRFGVTRKEQDQAAVDSHRKAA 209
P+G +E +A R G+TR++ D + S R+AA
Sbjct: 123 -----PLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDVDAFGLRSQRRAA 177
Query: 210 AATAAGKFKDEIIPVATKIVDPK---TGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 266
A A G+F EI PV ++D + TG+ + VT D G+R +T++ LA LKPV +
Sbjct: 178 QAWAEGRFDREISPVQAPVLDEEGQPTGETRLVT--RDQGLR-DTTMEGLAGLKPVLE-G 233
Query: 267 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPA 326
G TAG SSQ+SDGA AVL M A GL A VG +P GP A
Sbjct: 234 GIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAK 293
Query: 327 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCV 386
++ AG+++ DIDL EINEAFAS + D +K+NVNGGA+A+GHP+G+TGAR +
Sbjct: 294 VLEKAGMKIGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLI 353
Query: 387 ATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
T LHE++R + +I+MC G + + ER
Sbjct: 354 TTALHELERTDK--STALITMCAGGALSTGTIIER 386
|
Length = 387 |
| >gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 251 bits (642), Expect = 1e-79
Identities = 140/396 (35%), Positives = 224/396 (56%), Gaps = 37/396 (9%)
Query: 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ 111
V I A RTA S G T L A ++K +++ + +DP+ V ++++G V+ GS
Sbjct: 5 VYITHAKRTAF-GSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSG 63
Query: 112 RASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI------------ 159
+ + R +AG P+ VP T+N+ C SGL++VA A +I G +I
Sbjct: 64 Q-NPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLG 122
Query: 160 --------GSVNPKVKAFEQAQNCLLP-------MGVTSENVAHRFGVTRKEQDQAAVDS 204
G+ +K + Q L MG+T+EN++ +F ++R+EQD+ A+ S
Sbjct: 123 MHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQEQDEFALSS 182
Query: 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 264
H+KAA A AG FKDEI+P+ I + D+ +RP+TS+ L+KL+P F
Sbjct: 183 HKKAAKAQLAGIFKDEILPIEVTI------KKTTSLFDHDETVRPDTSLEILSKLRPAFD 236
Query: 265 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAI 324
K+G TAGN+S ++DGA ++++ + L L ++A+ GVDP+IMG P A
Sbjct: 237 KNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPAS 296
Query: 325 PAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGAR 384
A+ AG ++D+++ E+NEAFA+Q +Y ++ D EK+N+NGGA+AIGHP+G +G R
Sbjct: 297 QKALSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGR 356
Query: 385 CVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420
+ TL+H ++R + G++++CIG GMG A E
Sbjct: 357 VLITLIHGLRR--AKAKKGLVTLCIGGGMGMAMCVE 390
|
Length = 392 |
| >gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 251 bits (644), Expect = 3e-79
Identities = 156/437 (35%), Positives = 223/437 (51%), Gaps = 79/437 (18%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
V IV RT K+ RGG DL +A++ + P ++ ++++G P
Sbjct: 4 PVYIVDGARTPFLKA-RGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCA-MPSP 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK----------------- 153
A+ R+ A G E VP TV R C+SG+QA+ AA I
Sbjct: 62 DEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSH 121
Query: 154 -------------AGFYDIGSVNPKVKAFEQAQN-----------------CLLPMGVTS 183
AG+Y S+ K+ A + + L MG T+
Sbjct: 122 APLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLRGLTDPVVGLNMGQTA 181
Query: 184 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISV 243
E +AHRFG+TR++ D A SH++ AAA A G+ K E++P+ + D K D
Sbjct: 182 EVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLFDR--DGKFYDH------- 231
Query: 244 DDGIRPNTSVSELAKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGV 302
DDG+RP++S+ +LAKLKP F + G TAGNSSQ++DGA +LL + GLP LG
Sbjct: 232 DDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGR 291
Query: 303 FRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV---------- 352
+DP+ MG+GP A ++ GL L+D+DL+EINEAFA+Q +
Sbjct: 292 IVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEE 351
Query: 353 YCRNKLGL-------DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 405
YCR +LGL D E++NV+GGA+A+GHP+G +GAR V LLH +KRRG + G+
Sbjct: 352 YCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALKRRG--TKRGIA 409
Query: 406 SMCIGTGMGAAAVFERG 422
++CIG G G A + ER
Sbjct: 410 AICIGGGQGGAMLLERV 426
|
Length = 426 |
| >gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Score = 250 bits (640), Expect = 4e-79
Identities = 143/411 (34%), Positives = 211/411 (51%), Gaps = 60/411 (14%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVL-----KAVIEKTNVDPSEVGDIVVGTV 105
DV IV RT + GGF + L A L +A +E+ VDP+ V ++ G V
Sbjct: 2 DVCIVGVARTPI-----GGFLGSL-SSLSATELGSIAIQAALERAGVDPALVQEVFFGNV 55
Query: 106 LAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPK 165
L+ +A R AA AG P + TVN+ C+SG++AV A +I+ G D+
Sbjct: 56 LSANLGQAP-ARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDV------ 108
Query: 166 VKA--FEQAQNC--LLP------------------------------MGVTSENVAHRFG 191
V A E N LP MGV +E A ++
Sbjct: 109 VVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYS 168
Query: 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNT 251
++R+EQD A+ S+ +A AA AG F EI+PV P V + D+G+
Sbjct: 169 ISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEV----PGGRGRPSVIVDKDEGLGKFD 224
Query: 252 SVSELAKLKPVFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG 310
+L KL+P FK+D G+ TAGN+S +SDGA A++L+ A+ GL ++ R +A
Sbjct: 225 PA-KLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAA 283
Query: 311 VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGG 370
P + PA+AIP A+K AGL+ +D +EINEAF+ + + LGLDPEK+NV+GG
Sbjct: 284 QAPELFTTAPALAIPKALKHAGLEASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGG 343
Query: 371 ALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
A+++GHP+G +GAR + TLL ++ + ++GV +C G G +A V E
Sbjct: 344 AVSLGHPIGCSGARILVTLLGVLRSKNG--KYGVAGICNGGGGASAIVVEL 392
|
Length = 394 |
| >gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 246 bits (631), Expect = 8e-78
Identities = 143/405 (35%), Positives = 216/405 (53%), Gaps = 58/405 (14%)
Query: 54 IVAAYRTALCKSKRGG-FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
IVAA RTA ++GG +P DL A VL A+++++ DP+ + D+++G V G Q
Sbjct: 6 IVAAARTA--GGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQA 63
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQA 172
+ R A + PE+VP +++RQC S QA+ A A+ +G DI V A
Sbjct: 64 TNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDI------VIAAGVE 117
Query: 173 QNCLLPMGVTS-------------------------------ENVAHRFGVTRKEQDQAA 201
+PMG S E +A ++G+++ + D+ A
Sbjct: 118 SMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAEMMAKKYGLSKDQLDEFA 177
Query: 202 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261
+ SH++A AAT AGKFK EI+P+ + D +VD+GIR + ++ +A +K
Sbjct: 178 LQSHQRAIAATQAGKFKAEIVPL-----EITRADGSGEMHTVDEGIRFDATLEGIAGVKL 232
Query: 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGV-----FRTFAAVGVDPAIM 316
+ + G TA +SQ+ DGA V+ V +GL LGV +G DP IM
Sbjct: 233 I-AEGGRLTAATASQICDGASGVM-----VVNERGLKALGVKPLARIHHMTVIGGDPVIM 286
Query: 317 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 376
P A A+K AG+++DDIDL+E+NEAFAS + G DPE++NVNGGA+A+GH
Sbjct: 287 LEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGGAIALGH 346
Query: 377 PLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
PLG +G + + TL+H +K+RG+ R+G+ +MC G GM + ER
Sbjct: 347 PLGASGTKLMTTLVHALKQRGK--RYGLQTMCEGGGMANVTIVER 389
|
Length = 390 |
| >gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 243 bits (623), Expect = 3e-76
Identities = 148/436 (33%), Positives = 210/436 (48%), Gaps = 75/436 (17%)
Query: 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAP 108
GD + IV+ RT K + F DL V+ ++ ++ +DP + +V G V+
Sbjct: 4 GDRIAIVSGLRTPFAK-QATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVV-Q 61
Query: 109 GSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-------- 160
+ + R G +V+R C++ QAVA+VA +I AG DIG
Sbjct: 62 MPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSS 121
Query: 161 SVNP---------------KVKAFEQAQNC--------LLP-------------MGVTSE 184
SV P K + Q LLP MG T+E
Sbjct: 122 SVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAE 181
Query: 185 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 244
+A +G++R+EQD A SH+ AA A A GK DE V T V P + D
Sbjct: 182 QMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDE---VMTAHVPPYKQ-----PLEED 233
Query: 245 DGIRPNTSVSELAKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVF 303
+ IR ++++ + AKL+P F +K GT TA NS+ ++DGA AVLLM S A GL LG
Sbjct: 234 NNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYL 293
Query: 304 RTFAAVGVDP-AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV---------- 352
R++A +D M +GPA A P A++ AGL L D+ L +++EAFA+Q +
Sbjct: 294 RSYAFAAIDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASER 353
Query: 353 YCRNKLG-------LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 405
+ R KLG +D K NV GG++A GHP TGAR + LHE++RRG G+
Sbjct: 354 FAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGG--LGLT 411
Query: 406 SMCIGTGMGAAAVFER 421
+ C G+GAA V E
Sbjct: 412 TACAAGGLGAAMVLEV 427
|
Length = 428 |
| >gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 235 bits (600), Expect = 1e-73
Identities = 136/380 (35%), Positives = 202/380 (53%), Gaps = 37/380 (9%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
VIV A RT + K K G KD L AP+L + + E+ D+++G V+ PG
Sbjct: 4 VIVEAKRTPIGK-KNGMLKDYEVQQLAAPLLTFLSKGM---EREIDDVILGNVVGPGGNV 59
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAG---FYDIGSVNPKVKAF 169
A R++A AG +P T++RQC +GL+A+ I+ G Y G V +
Sbjct: 60 A---RLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSP 116
Query: 170 EQAQNCLLP-------MGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEII 222
Q + P MGV +E VA R+ +TR+ QD+ A S+++ A G +EI+
Sbjct: 117 FQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEIL 176
Query: 223 PVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL-AKLKPVFKKDGTTTAGNSSQVSDGA 281
+ D+ I+ + + + KP F +GT TAGNS V+DGA
Sbjct: 177 SFNGLL---------------DESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGA 221
Query: 282 GAVLLMKRSVAMRKGL-PILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 340
AVL+M+ A + G P+L R+ A VGVDP + G GP A+ + ++++DID
Sbjct: 222 CAVLVMEEGQARKLGYKPVLRFVRS-AVVGVDPNLPGTGPIFAVNKLLNEMNMKVEDIDY 280
Query: 341 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDC 400
FEINEAFAS+ V C +L + EK+NVNGGA+A+GHP G +GA V L ++ KR D
Sbjct: 281 FEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKR--EDM 338
Query: 401 RFGVISMCIGTGMGAAAVFE 420
++G+ ++ IG G+G A +FE
Sbjct: 339 KYGIATLGIGGGIGLALLFE 358
|
Length = 361 |
| >gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 4e-64
Identities = 140/432 (32%), Positives = 203/432 (46%), Gaps = 79/432 (18%)
Query: 51 DVVIVAAYRT--ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAP 108
+ I+ A RT + K +G +P L A VLKA+ E+ ++ ++V DI+ T
Sbjct: 3 EAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQR 62
Query: 109 GSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYD---------- 158
G Q RMAA AG+ T++R C G+ +V AA I +G D
Sbjct: 63 GKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMM 122
Query: 159 -------------------IGSVNPKVKAFE-QAQNCLLPMGVTSENVAHRFGVTRKEQD 198
+GS N +++A Q+ GV + +A G+TR+ D
Sbjct: 123 SYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQ-----GVCGDAIATMEGITREALD 177
Query: 199 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 258
++S R+AA A G+F ++PV D+ V + ++ RP T+ LA
Sbjct: 178 ALGLESQRRAARAIKEGRFDKSLVPV--------YRDDGSVALDHEEFPRPQTTAEGLAA 229
Query: 259 LKPVFKK-------DGTTT-------------------AGNSSQVSDGAGAVLLMKRSVA 292
LKP F D TT AGNSS V DGA A+LL ++ A
Sbjct: 230 LKPAFTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYA 289
Query: 293 MRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAF---AS 349
+ GL A +G DP +M P A + AGL DDIDL+EINEAF A
Sbjct: 290 EKHGLKPRARIVAMANMGDDPTLMLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAE 349
Query: 350 QFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCI 409
+F+ L LD +K+NVNGGA+A+GHP+G TG+ + T+L E++RRG + G+++MC
Sbjct: 350 KFI---RDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERRGL--KRGLVTMCA 404
Query: 410 GTGMGAAAVFER 421
GM A + ER
Sbjct: 405 AGGMAPAIIIER 416
|
Length = 417 |
| >gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 7e-64
Identities = 145/445 (32%), Positives = 199/445 (44%), Gaps = 99/445 (22%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
V I+ R +S G + D D+L L ++++ + +G++V G VL
Sbjct: 8 RVAILGGNRIPFARSN-GAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSR 66
Query: 111 --QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-------- 160
EC + + + P T P + + C +GL+A VA I G D G
Sbjct: 67 DFNLTRECVLGSALS--PYT-PAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTT 123
Query: 161 -----SVNP-----------------KVKAF----------EQAQN----CLLPMGVTSE 184
+VN ++KA E +N L MG +
Sbjct: 124 SDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGLSMGEHAA 183
Query: 185 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 244
A +G++R+ QD+ A SH+ AAA G F D I P G + D
Sbjct: 184 ITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL--------GLTR------D 229
Query: 245 DGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGV 302
+ +RP++S+ +LAKLKPVF K T TAGNS+ ++DGA VLL A GLP+L
Sbjct: 230 NNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAY 289
Query: 303 FRTF--AAV----GVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV---- 352
AAV G + +M PA A+P + GL L D D +EI+EAFASQ +
Sbjct: 290 LVDAETAAVDFVHGKEGLLMA--PAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLK 347
Query: 353 ------YCRNKLGL-------DPEKINVNGGALAIGHPLGTTGARCVATL---LHEMKRR 396
YCR +LGL D K+NVNG +LA GHP TG R VATL L E K
Sbjct: 348 AWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAE-KGS 406
Query: 397 GRDCRFGVISMCIGTGMGAAAVFER 421
GR G+IS+C G G A+ ER
Sbjct: 407 GR----GLISICAAGGQGVTAILER 427
|
Length = 427 |
| >gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 206 bits (526), Expect = 3e-62
Identities = 137/405 (33%), Positives = 194/405 (47%), Gaps = 40/405 (9%)
Query: 45 TSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGT 104
T+V D +VI +A RT + + +G F L A + A +E+ + P ++ ++V+G
Sbjct: 2 TAVDQDPIVIASAARTPMA-AFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGC 60
Query: 105 VLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVN- 163
VL P Q + R AA AG P +V TVN+ C SG++A + AG D+
Sbjct: 61 VL-PAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGG 119
Query: 164 -----------PKVKA-----------------FEQAQNCLLPMGVTSENVAHRFGVTRK 195
PK + E A + MG +E A +G TR+
Sbjct: 120 MESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFTRE 179
Query: 196 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSE 255
QD A++S +A A G F EI PV V K GD I D+ + +
Sbjct: 180 AQDAFAIESLARAKRANEDGSFAWEIAPVT---VAGKKGD---TVIDRDEQPF-KANPEK 232
Query: 256 LAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI 315
+ LKP F K GT TA NSS +SDGA A+++M+ S A R GL L + P+
Sbjct: 233 IPTLKPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSK 292
Query: 316 MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIG 375
P AI + G + ++DLFEINEAFA + + GL EK+NVNGGA A+G
Sbjct: 293 FTTAPVGAIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALG 352
Query: 376 HPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420
HP+G +GAR + TL+ ++ RG + GV S+CIG G A E
Sbjct: 353 HPIGASGARILVTLIGALRARG--GKRGVASLCIGGGEATAMGIE 395
|
Length = 397 |
| >gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain | Back alignment and domain information |
|---|
Score = 191 bits (488), Expect = 3e-60
Identities = 76/125 (60%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
Query: 297 LPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRN 356
L L R++A VGVDPAIMG+GPA AIP A+K AGL ++DIDLFEINEAFA+Q +
Sbjct: 1 LKPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAK 60
Query: 357 KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA 416
LG+DPEK+NVNGGA+A+GHPLG +GAR + TLLHE+KRRG ++G+ ++CIG G G A
Sbjct: 61 DLGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELKRRGG--KYGLATLCIGGGQGVA 118
Query: 417 AVFER 421
+ ER
Sbjct: 119 MIIER 123
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 123 |
| >gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 6e-58
Identities = 129/408 (31%), Positives = 198/408 (48%), Gaps = 63/408 (15%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DV IV+A RTA+ K R F L +KAVI+ +DP+ V ++++G V+ G
Sbjct: 3 DVYIVSAKRTAIGKFGRS-FSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI----GSVNPKV 166
+ + AA++AG P V TVN C+SG+ AV A I G D+ G N
Sbjct: 62 GQ-NPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSN 120
Query: 167 KAFEQAQNCLLP----------------------------------MGVTSENVAHRFGV 192
F LLP MGV++E A ++G+
Sbjct: 121 APF------LLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGI 174
Query: 193 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTS 252
TR+ D+ +V S+ +A AT +G+F++EI+P + D+GIR T+
Sbjct: 175 TREMADEYSVQSYERAIRATESGEFRNEIVPFND--------------LDRDEGIR-KTT 219
Query: 253 VSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD 312
+ +LAKL P F K+G TAGNS+Q+SDG A+++ GL + + + +D
Sbjct: 220 MEDLAKLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLD 279
Query: 313 PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAL 372
P P A ++ +D DL E NEAF+ + R++L +D E+ NVNGGA+
Sbjct: 280 PLDFVEAPIPATRKLLEKQNKSIDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAV 339
Query: 373 AIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420
AIGHP+G +G+R + TL++ +K R + G+ ++C G G E
Sbjct: 340 AIGHPIGNSGSRIIVTLINALKT--RHMKTGLATLCHGGGGAHTLTLE 385
|
Length = 388 |
| >gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Score = 184 bits (469), Expect = 1e-53
Identities = 134/436 (30%), Positives = 202/436 (46%), Gaps = 77/436 (17%)
Query: 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLA- 107
G+ + IVA RT + + F DL V+ ++ ++ +DP + +V G V+
Sbjct: 6 GERIAIVAGLRTPFAR-QATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQM 64
Query: 108 PGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------- 160
P + + R G +V R C++ Q+ +VA +I AG DIG
Sbjct: 65 PEAPNIA--REIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADS 122
Query: 161 -SVNP---------------KVKAFEQAQNCL---------------------LPMGVTS 183
SV P K + Q L MG T+
Sbjct: 123 SSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQTA 182
Query: 184 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISV 243
E +A +G+TR EQD A SH A+ A GK E V T P ++ I+
Sbjct: 183 EQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGE---VMTAFPPPY---KQW--IAE 234
Query: 244 DDGIRPNTSVSELAKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGV 302
D+ IR N++++ AKL+P F +K G+ TA NS+ ++DGA AV+LM+ A G+ LG
Sbjct: 235 DNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGY 294
Query: 303 FRTFAAVGVDP-AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV--------- 352
R++A +D M +GP+ A P A++ AGL L D+ L +++EAFA+Q +
Sbjct: 295 IRSYAFTAIDVWQDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASD 354
Query: 353 -YCRNKLG-------LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGV 404
+ + LG +D K NV GG++A GHP TGAR + L E+KRRG G+
Sbjct: 355 KFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELKRRGGG--LGL 412
Query: 405 ISMCIGTGMGAAAVFE 420
+ C G+GAA + E
Sbjct: 413 NTACAAGGLGAAMILE 428
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 430 |
| >gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 172 bits (436), Expect = 3e-49
Identities = 120/415 (28%), Positives = 171/415 (41%), Gaps = 72/415 (17%)
Query: 55 VAAYRTALCK--SKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
A TA K + G + + A + A +E V V + +G VL +
Sbjct: 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVL-GAGEG 59
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQA 172
+ + AA +AG + P +N C SGL+A+A I G
Sbjct: 60 QNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGD---------------- 103
Query: 173 QNCLLPMGV-----TSENVAHRFGV--------TRKEQDQAAVDSHRKAAAATAAGKFKD 219
NC+L G ++EN A + R D A+ A AA G+FKD
Sbjct: 104 ANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEKDGRFKD 163
Query: 220 EIIPVATKIVDPKTGDEKPVTISVDDGIR--PNTSVSELAKLKPVFKKDGTTTAGNSSQV 277
E K G + + D+ I+ S+ E+AKL+P F K+ TAGN+ +
Sbjct: 164 EFAKFGVK------GRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGL 217
Query: 278 SDGAGAVLLMKRSVAMRKGLPI-------LGVFRTFAAVGVDPA----IMGVGPAVAIPA 326
+DGA A +LM + A + GL L + A+ D + G GP A
Sbjct: 218 NDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARK 277
Query: 327 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK------------------INVN 368
A++ AGL + D+DL E ++AFA+ LGL PE IN N
Sbjct: 278 ALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPN 337
Query: 369 GGALAIGHPLGTTGARCVATLLHEMKRRGRDC---RFGVISMCIGTGMGAAAVFE 420
GGA+AIGHP+G +GA A L E+K G+ +CIG G GAA E
Sbjct: 338 GGAIAIGHPIGASGAAICAELCFELKGEAGKRQGAGAGLALLCIGGGGGAAMCIE 392
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 393 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 79.0 bits (195), Expect = 1e-16
Identities = 43/160 (26%), Positives = 61/160 (38%), Gaps = 12/160 (7%)
Query: 271 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD----PAIMGVGPAVAIPA 326
DGA A ++ A+R+G + AA PA+ G G A A
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 327 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK---INVNGGALAIGHPLGTTGA 383
A++ AGL DID E + LGLDP+ V+ + GHPLG G
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGL 213
Query: 384 RCVATLLHEMKR-----RGRDCRFGVISMCIGTGMGAAAV 418
+ LL ++ R+ R ++ G AA V
Sbjct: 214 AILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVV 253
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 2e-13
Identities = 90/403 (22%), Positives = 139/403 (34%), Gaps = 103/403 (25%)
Query: 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV 134
P +L A +A ++ ++P+++ +VVG Q +A Y G P V
Sbjct: 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAE-YLGLLG-KPATRV 73
Query: 135 NRQCSSGLQAVADVAAAIKAGFYDIG---------SVNPKVKAFEQAQNCLLPMGVTSEN 185
+SG AV AAAI +G D+ V +A +A +
Sbjct: 74 EAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGG 133
Query: 186 V-------------AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPV----ATKI 228
+ HR+G TR++ + AV +HR AA A +F+ I + I
Sbjct: 134 LTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAARNPYA-QFRKPITVEDVLNSRMI 192
Query: 229 VDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMK 288
DP + VSDGA AV+L
Sbjct: 193 ADP-------------------------------------LRLLDCCPVSDGAAAVVLAS 215
Query: 289 RSVAMRKGLP---ILGV-----FRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 340
A ILGV + + ++ +A A K AG+ DDID+
Sbjct: 216 EERARELTDRPVWILGVGAASDTPSLSERDDFLSLDAA--RLAARRAYKMAGITPDDIDV 273
Query: 341 FEINEAFASQ-FVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTT 381
E+ + F + + LG + +N +GG L+ GHPLG T
Sbjct: 274 AELYDCFTIAELLALED-LGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGAT 332
Query: 382 GARCVATLLHEMKRRG-----RDCRFGVISMCIGTGMGAAAVF 419
G + +++ R G+ IG G G+AAV
Sbjct: 333 GLAQAVEAVRQLRGEAGARQVPGARVGLAHN-IG-GTGSAAVV 373
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 7e-06
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 20/121 (16%)
Query: 278 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAG 332
+GAGA++L + A+ +G I + PA G G A+ AA+ AG
Sbjct: 231 GEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAG 290
Query: 333 LQLDDID----------LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTG 382
L +DID + E+ A + V G + + V+ GH LG G
Sbjct: 291 LTPEDIDYINAHGTSTPANDKAESLAIKRV-----FGEHAKSLPVSSTKSLTGHTLGAAG 345
Query: 383 A 383
A
Sbjct: 346 A 346
|
Length = 412 |
| >gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 89/427 (20%), Positives = 146/427 (34%), Gaps = 107/427 (25%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLA--- 107
DV I+ +T K G D DL +E +D ++ + VG + A
Sbjct: 3 DVAIIGVGQT-----KFGELWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLF 57
Query: 108 -----PGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI--- 159
+ + A YAG R V C+SG A+ A+ +G D+
Sbjct: 58 VSQEHIAA-------LIADYAGLAPIPATR-VEAACASGGAALRQAYLAVASGEADVVLA 109
Query: 160 -------GSVNPK-VKAFEQAQNCL--LPMGVTSENVA--------HRFGVTRKEQDQAA 201
P +A +A + G T + H++G T ++ A
Sbjct: 110 AGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLALVA 169
Query: 202 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261
V +H + A +F+ E I+V+ + + V++ KL
Sbjct: 170 VKNHYNGSKNPYA-QFQKE--------------------ITVEQVLN-SPPVADPLKLL- 206
Query: 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR---KGLPILGVFRT--FAAVGVDPAIM 316
+ S ++DGA AV+L A + I + A+
Sbjct: 207 -----------DCSPITDGAAAVILASEEKAKEYTDTPVWIKASGQASDTIALHDRKDFT 255
Query: 317 GVGPAV-AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK----------- 364
+ AV A A K AG++ DID+ E+++ F + LG +K
Sbjct: 256 TLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIAEILAYEDLGF-AKKGEGGKLAREGQ 314
Query: 365 --------INVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGT----- 411
+N +GG A GHP+G TG ++ +++ R VI G
Sbjct: 315 TYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQQVIGAGYGLTHNVG 374
Query: 412 GMGAAAV 418
G G AV
Sbjct: 375 GTGHTAV 381
|
Length = 389 |
| >gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 7e-05
Identities = 41/135 (30%), Positives = 53/135 (39%), Gaps = 32/135 (23%)
Query: 275 SQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-------VDPAIMGVGPAVAIPAA 327
S VSDGA A++L A + FR A V DP GP A A
Sbjct: 213 SLVSDGAAALVLADAETARALQRAV--RFRARAHVNDFLPLSRRDPLAFE-GPRRAWQRA 269
Query: 328 VKSAGLQLDDIDLFEINEAF--ASQFVYCRNKLGLDPE------------------KINV 367
+ AG+ LDD+ E ++ F A Y +GL P +N
Sbjct: 270 LAQAGVTLDDLSFVETHDCFTIAELIEY--EAMGLAPPGQGARAIREGWTAKDGKLPVNP 327
Query: 368 NGGALAIGHPLGTTG 382
+GG A GHP+G TG
Sbjct: 328 SGGLKAKGHPIGATG 342
|
Length = 389 |
| >gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.001
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 37/144 (25%)
Query: 275 SQVSDGAGAVLLMK----RSVAMRKGLPI----------LGVFRTFAAVGVDPAIMGVGP 320
SQV+DG V+L R A + +P LG+ + DP ++ P
Sbjct: 220 SQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL---P 276
Query: 321 AV--AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE--------------- 363
V A+ A + AG+ LDD+D FE+++ F + +GL
Sbjct: 277 HVRQAVLDAYRRAGVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIG 336
Query: 364 ---KINVNGGALAIGHPLGTTGAR 384
IN +GG + GHP+G +G R
Sbjct: 337 GRLPINPSGGLIGGGHPVGASGVR 360
|
Length = 403 |
| >gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 79/368 (21%), Positives = 130/368 (35%), Gaps = 89/368 (24%)
Query: 65 SKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMA---AF 121
SK G D +L +K + V +++ +VVG+ + R E A A
Sbjct: 11 SKFGRRDDVSVQELAWESIKEALNDAGVSQTDIELVVVGST----AYRGIELYPAPIVAE 66
Query: 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGV 181
Y+G VP+R V C++GL A A+ +G D+ K E + L +G
Sbjct: 67 YSGLTGKVPLR-VEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGG 125
Query: 182 TSEN--------------------VAH--RFGVTRKEQDQAAVDSHRKAAAATAAGKFKD 219
N H +G T ++ +V +H+ A
Sbjct: 126 RGGNYQWEYHFYGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGA---------- 175
Query: 220 EIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSD 279
++PK +KPVT V++ ++ +S KL +S +SD
Sbjct: 176 ---------MNPKAHFQKPVT--VEEVLKSRA-ISWPIKLL------------DSCPISD 211
Query: 280 GAGAVLLMKRSVAMRKGL--PI----LGVFRTFAAVGVDPAIMGVGPAV-AIPAAVKSAG 332
G+ + + P+ +G +A V +G A A A
Sbjct: 212 GSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAK 271
Query: 333 LQLDDIDLFEINEAFASQFVYCRNKLGL-------------DPEK-----INVNGGALAI 374
+ +DI++ +++AF + LG EK +N+ GG A
Sbjct: 272 VTPNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAK 331
Query: 375 GHPLGTTG 382
GHPLG TG
Sbjct: 332 GHPLGATG 339
|
Length = 385 |
| >gnl|CDD|181173 PRK07937, PRK07937, lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.002
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 277 VSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG-----VGPAVAIPAAVKSA 331
++DGA AV+L A L + T ++ +G P+ A+ AA +
Sbjct: 204 ITDGAAAVVLAAGDRARE--LRERPAWITGIEHRIESPSLGARDLTRSPSTAL-AAEAAT 260
Query: 332 GLQLDDIDLFEINEAFASQFVYCRNKLGL-DPEKINVNGGALAIGHPLGTTG 382
G +D+ E++ F Q + R LGL D K+N +GGALA +P+ G
Sbjct: 261 GGDAGGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAG 311
|
Length = 352 |
| >gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Score = 39.4 bits (93), Expect = 0.002
Identities = 45/161 (27%), Positives = 63/161 (39%), Gaps = 41/161 (25%)
Query: 278 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAV------AIPAAVKS- 330
SDG+GA LL + R A G DP ++ G V +P +++
Sbjct: 181 SDGSGADLLTIPAGGSR--------SPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEA 232
Query: 331 ---AGLQLDDIDLF-------EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGT 380
AGL DDID F I EA A +LGL EK+ VN G
Sbjct: 233 LEKAGLTPDDIDWFVPHQANLRIIEAVAK-------RLGLPEEKVVVN------LDRYGN 279
Query: 381 TGARCVATLLHEMKRRGRDCRFGVISMC-IGTGM--GAAAV 418
T A + L E G+ + ++ + G G+ GAA +
Sbjct: 280 TSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. Length = 320 |
| >gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.004
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 31/138 (22%)
Query: 278 SDGAGAVLLMKRSVAMRKGLP----ILG------VFRTFAAVGVDPAIMGVGPAVAIPAA 327
+ GA A ++ A + GL I+ TF + ++G A
Sbjct: 214 TCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSM-IDLVGYDMTRAAAQQ 272
Query: 328 V-KSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE----------------KINVN-- 368
V + AG+ +DID+ E+++ F++ + LGL PE + VN
Sbjct: 273 VYEQAGIGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPS 332
Query: 369 GGALAIGHPLGTTG-ARC 385
GG L+ GHPLG TG A+C
Sbjct: 333 GGLLSKGHPLGATGLAQC 350
|
Length = 391 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 445 | |||
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 100.0 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 100.0 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 100.0 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 100.0 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 100.0 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 100.0 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 100.0 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 100.0 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 100.0 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 100.0 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 100.0 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 100.0 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 100.0 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 100.0 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 100.0 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 100.0 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 100.0 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 100.0 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06158 | 384 | thiolase; Provisional | 100.0 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 100.0 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 100.0 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 100.0 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 100.0 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 100.0 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 99.96 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.94 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.94 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.94 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.93 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.93 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.92 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.92 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.92 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.91 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.91 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.91 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.9 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.9 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.9 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.89 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.89 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.89 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.89 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 99.89 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.89 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.88 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.88 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.87 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.87 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 99.87 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.86 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.86 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 99.85 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.85 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.84 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.84 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 99.83 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 99.83 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 99.83 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 99.82 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 99.81 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.81 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.81 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 99.81 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 99.8 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 99.8 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.79 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 99.79 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 99.79 | |
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 99.78 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 99.77 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.77 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.77 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.76 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 99.75 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 99.75 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.73 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.72 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.69 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 99.69 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 99.68 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 99.64 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.63 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 99.63 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.61 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.55 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.53 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 99.53 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.48 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 99.46 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 99.24 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 98.93 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 98.79 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 98.66 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 98.59 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 98.45 | |
| PF02797 | 151 | Chal_sti_synt_C: Chalcone and stilbene synthases, | 98.23 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 98.05 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 97.97 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 97.24 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 96.73 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 95.81 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 95.53 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 95.28 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 94.74 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 94.74 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 94.09 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 93.92 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 93.91 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 93.8 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 93.77 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 93.53 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 93.5 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 93.07 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 92.86 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 92.77 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 92.39 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 91.36 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 91.28 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 91.28 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 91.11 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 90.95 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 90.6 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 90.29 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 90.12 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 89.39 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 89.37 | |
| PRK06158 | 384 | thiolase; Provisional | 88.84 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 88.55 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 86.91 | |
| PRK06840 | 339 | hypothetical protein; Validated | 86.35 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 86.35 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 86.02 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 85.79 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 85.79 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 84.99 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 84.96 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 84.9 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 84.83 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 84.79 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 83.77 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 83.55 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 83.55 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 82.91 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 82.69 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 82.41 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 82.34 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 82.22 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 81.24 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 80.08 |
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-91 Score=650.49 Aligned_cols=417 Identities=82% Similarity=1.259 Sum_probs=396.2
Q ss_pred HHHHHHHHHhccCCCCCCCccchhhhhhcccccCCcccccccCCCCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHH
Q 013344 4 AINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVL 83 (445)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa 83 (445)
||+|+|.++.||+++.. .+.++..+|.++++.+|+ +||+||++.||+++|.++|.|+|+.++||...+.
T Consensus 1 ~~er~~~ll~hl~~~s~-----s~~~~a~~c~s~~~~~~~------~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl 69 (435)
T KOG1389|consen 1 AMERQQVLLRHLRPSSS-----SASLSASACLSGDSAASA------EDVVIVAALRTAICKAKRGGFKDTRPDELLAAVL 69 (435)
T ss_pred CchHHHHHHHhcCCccc-----ccccccccccccCccccc------cCEEEEeeccchhhhcccCCcccCChHHHHHHHH
Confidence 58999999999987654 356888999999999876 8999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE---
Q 013344 84 KAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG--- 160 (445)
Q Consensus 84 ~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v--- 160 (445)
+..+++.+++|+.|+.|++|+++.++. +...+|+.+++.|+|.++|..++|++|+||++|+...+..|++|.+|++
T Consensus 70 ~a~ie~t~~dp~~igdi~vG~vL~pg~-ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~ 148 (435)
T KOG1389|consen 70 RAVIEKTNLDPSLIGDIVVGTVLAPGS-GASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAA 148 (435)
T ss_pred HHHHhhcCCCHHHhcceeeeeccCCCc-chHHHHHHHHHcCCCcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeeccc
Confidence 999999999999999999999999987 6788999999999999999999999999999999999999999999998
Q ss_pred ---ecC------------ccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccce
Q 013344 161 ---SVN------------PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 225 (445)
Q Consensus 161 ---~~~------------~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~ 225 (445)
.+. +.+..+.+..+|.+|||+++|+++++||+||||+|.+++.||++|+++...|.|++||+|++
T Consensus 149 GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~ 228 (435)
T KOG1389|consen 149 GVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVK 228 (435)
T ss_pred chhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeee
Confidence 222 22334567789999999999999999999999999999999999999999999999999999
Q ss_pred ecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEE
Q 013344 226 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRT 305 (445)
Q Consensus 226 ~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~ 305 (445)
++..||+ |.+|..+++.||++||.+|++.|.+++|+|.+||+.|.+|+|+++||++|++|+++..|.++|+++++.+..
T Consensus 229 tkv~D~~-g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~ 307 (435)
T KOG1389|consen 229 TKVVDPK-GDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRD 307 (435)
T ss_pred eeccCCc-CCccceeEecCCCCCCCcchhHHhhcchhhhcCCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeee
Confidence 9999998 888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHH
Q 013344 306 FAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARC 385 (445)
Q Consensus 306 ~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~ 385 (445)
|...+++|.+||++|+.||+.+|+.+||+.+|||+||+|++|+++.++|.++|+|+++|+|++||++++|||+|+||+++
T Consensus 308 f~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~ 387 (435)
T KOG1389|consen 308 FAAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEINEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARC 387 (435)
T ss_pred eeeecCCHHHcCCCchhhhHHHHHHcCCcccccceeehhHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEEcccccccccccc
Q 013344 386 VATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGDCADELCNVRK 433 (445)
Q Consensus 386 i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~~~~~~~~~~~~~ 433 (445)
+.++|++|++++.+.++|+++||+|+||+++++|+|.+..++|+++|+
T Consensus 388 VaTlL~emKrrgkd~~~GVvSmCIGtGmGaAAvFer~~~~d~~~~~~~ 435 (435)
T KOG1389|consen 388 VATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGGGVDELDNARK 435 (435)
T ss_pred HHHHHHHHHhhccccccceEEEeecCCcchheeeecCCCCchhhhccC
Confidence 999999999998876789999999999999999999999999999885
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-76 Score=610.57 Aligned_cols=435 Identities=86% Similarity=1.302 Sum_probs=387.0
Q ss_pred ChHHHHHHHHHHhccCCCCCCCccchhhhhhcccccCCcccccccCCCCCcEEEEEeeeeccccCCCCCCCCCCHHHHHH
Q 013344 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLA 80 (445)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~ 80 (445)
|+++++|.+.++.||+++.+ . .+-|+.+.|+++++++|+|+-.+.++|||||++||||+++++|.+++.++.+|+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~ 76 (452)
T PLN02287 1 MEKAINRQRVLLRHLRPSSS-E---PSSLSASACAAGDSAAYHRTTAFGDDVVIVAAYRTPICKAKRGGFKDTYPDDLLA 76 (452)
T ss_pred CchHHHHHHHHHhhccCCCC-C---ccccccccccccchhhhccccCCCCCEEEEEeecCCCccCCCCCcCCCCHHHHHH
Confidence 88999999999999987433 1 3458889999999999999999999999999999999986567788999999999
Q ss_pred HHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE
Q 013344 81 PVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 81 ~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
+|+++||+++||+++|||.|++|++.+.+.++.+.++.++..+|++...|+++|+++|+||+.++..|+++|++|.+|++
T Consensus 77 eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvv 156 (452)
T PLN02287 77 PVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 156 (452)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeE
Confidence 99999999999999999999999987766544566778888999976699999999999999999999999999999999
Q ss_pred ------ecC--c-cchh--hh-----h-hhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccc
Q 013344 161 ------SVN--P-KVKA--FE-----Q-AQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 223 (445)
Q Consensus 161 ------~~~--~-~~~~--~~-----~-~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~p 223 (445)
.++ + .... .. + ..++..+||+++++|+++||+|||++|.+++++|+||.+||++|+|+.||+|
T Consensus 157 Lv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~p 236 (452)
T PLN02287 157 IGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVP 236 (452)
T ss_pred EEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceee
Confidence 121 1 0000 00 0 0123457999999999999999999999999999999999999999999999
Q ss_pred ceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEE
Q 013344 224 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVF 303 (445)
Q Consensus 224 v~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i 303 (445)
|+++.+++++++.+.++++.|+.+|++++.|+|.+++|+|+|+|++|.+|||+++|||+++||++++.+++++.+|++++
T Consensus 237 v~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~ 316 (452)
T PLN02287 237 VHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVF 316 (452)
T ss_pred eeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEE
Confidence 98754333334433457899999999999999999999999889999999999999999999999999999999999998
Q ss_pred EEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHH
Q 013344 304 RTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGA 383 (445)
Q Consensus 304 ~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~ 383 (445)
.++....+.|..++.++..+++++|+++||+++|||++|+||+|+.+.+.++|.||++++|+|++||++++|||+|+||+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~ 396 (452)
T PLN02287 317 RSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGA 396 (452)
T ss_pred EEEeeccCCCccchHHHHHHHHHHHHHcCCCHHHCCEEEecchHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHH
Confidence 98877667787788888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEEcccccccccccccccccc
Q 013344 384 RCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGDCADELCNVRKVESNNF 439 (445)
Q Consensus 384 ~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~~~~~~~~~~~~~~~~~~~ 439 (445)
+++.++++||++++++.++|++++|+|+|++.+++|++.|-.+|+.|+|||+.||+
T Consensus 397 ~~v~~l~~qL~~~~~~~~~gl~~~c~ggG~g~a~~ie~~~~~~~~~~~~~~~~~~~ 452 (452)
T PLN02287 397 RCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDSVDELSNARKVEGNNL 452 (452)
T ss_pred HHHHHHHHHHHhcCCCCCeeEEEEccccCceeEEEEEecCchhhhhhcccccCCCC
Confidence 99999999999865422689999999999999999999999999999999999986
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-70 Score=554.47 Aligned_cols=363 Identities=40% Similarity=0.651 Sum_probs=328.6
Q ss_pred CCcEEEEEeeeecccc-CCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 49 GDDVVIVAAYRTALCK-SKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~-~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
|++||||++.||||++ ++.|++++.++.||+.+|++++|+++||+|++||.|++|++++.+.++.++++.+++.+|+|.
T Consensus 1 m~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~ 80 (402)
T PRK08242 1 MTEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPE 80 (402)
T ss_pred CCcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCC
Confidence 5689999999999998 357899999999999999999999999999999999999999865435678898889999987
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--ccch-h--hh-h---h-hccccchhHhHHHHHHHhC
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PKVK-A--FE-Q---A-QNCLLPMGVTSENVAHRFG 191 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~~~-~--~~-~---~-~~~~~~mg~~ae~~a~~~g 191 (445)
++|+++||++|+||++||..|+++|++|.++++ + ++ +... . +. + . .....+||.++|+|+++||
T Consensus 81 ~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~~~g 160 (402)
T PRK08242 81 TVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIATKYG 160 (402)
T ss_pred CCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHHHhC
Confidence 899999999999999999999999999999998 2 22 1100 0 00 1 1 1234579999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC----CC
Q 013344 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK----DG 267 (445)
Q Consensus 192 isre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~----~G 267 (445)
+|||+||.|+++||+||.+|+++|+|++||+||+. + +|+ +++++|+++|+++|+|+|.+++|+|++ +|
T Consensus 161 isRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~----~-~~~---~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g 232 (402)
T PRK08242 161 FSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKD----Q-NGL---TILDHDEHMRPGTTMESLAKLKPSFAMMGEMGG 232 (402)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeec----C-CCC---EeeCCCCCCCCCCCHHHHhCCCCCccCccccCc
Confidence 99999999999999999999999999999999971 1 222 568999999999999999999999987 44
Q ss_pred -----------------ccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHH
Q 013344 268 -----------------TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKS 330 (445)
Q Consensus 268 -----------------~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~ 330 (445)
++|.+|+|+++|||+|+||++++.|+++++++.+++++++....+|..++.+|..+++++|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~ 312 (402)
T PRK08242 233 FDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPVPATRKALAK 312 (402)
T ss_pred ccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999988888888899999999999999
Q ss_pred cCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeec
Q 013344 331 AGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIG 410 (445)
Q Consensus 331 aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G 410 (445)
+||+++|||+||+||+|+.+.+.++|.||++++++|++||++++|||+|+||++++.+++++|+++++ ++|+.++|+|
T Consensus 313 AGl~~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~~~--~~g~~~~c~g 390 (402)
T PRK08242 313 AGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERRGK--RTALITLCVG 390 (402)
T ss_pred cCCCHHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998887 9999999999
Q ss_pred ccceeEEEEEE
Q 013344 411 TGMGAAAVFER 421 (445)
Q Consensus 411 ~G~~~a~~l~~ 421 (445)
+|++.+++|++
T Consensus 391 gG~g~a~~~e~ 401 (402)
T PRK08242 391 GGMGIATIIER 401 (402)
T ss_pred CCceeEEEEEe
Confidence 99999999997
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-69 Score=542.65 Aligned_cols=363 Identities=37% Similarity=0.551 Sum_probs=330.9
Q ss_pred CCcEEEEEeeeeccc--cCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCC
Q 013344 49 GDDVVIVAAYRTALC--KSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~--~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~ 126 (445)
|++||||++.||||+ |.+.|+|++.++.+|+..+++++|++++|+|++||.|++|++.+...++.+++|.+++..|||
T Consensus 1 m~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp 80 (417)
T PRK06025 1 MAEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYD 80 (417)
T ss_pred CCceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCC
Confidence 468999999999998 744689999999999999999999999999999999999999887765689999999999999
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ec--Cccc-h---hh------hh---h--hc--cccchhH
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SV--NPKV-K---AF------EQ---A--QN--CLLPMGV 181 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~--~~~~-~---~~------~~---~--~~--~~~~mg~ 181 (445)
.++|+++||+.|+||++|+.+|+++|++|+++++ .+ .|.+ . .+ .+ . .+ ...+||.
T Consensus 81 ~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~ 160 (417)
T PRK06025 81 IKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGV 160 (417)
T ss_pred CCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHH
Confidence 9999999999999999999999999999999998 12 1211 0 00 01 0 12 2358999
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
++|+++++||||||+||+|++.||+||.+|+.+|+|++||+||+. + +|. ++++.||++|+++|+|+|.+++|
T Consensus 161 ~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~----~-~~~---~~~~~De~~R~~~t~e~la~L~p 232 (417)
T PRK06025 161 CGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYR----D-DGS---VALDHEEFPRPQTTAEGLAALKP 232 (417)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEc----C-CCC---EEecCCCCCCCCCCHHHHcCCCC
Confidence 999999999999999999999999999999999999999999971 1 121 56899999999999999999999
Q ss_pred ccc--------CCCc------------------cccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCC
Q 013344 262 VFK--------KDGT------------------TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI 315 (445)
Q Consensus 262 ~~~--------~~G~------------------~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~ 315 (445)
+|+ ++|+ +|.+|+|+++|||+|+||++++.|+++++++.+++++++..+.+|..
T Consensus 233 ~F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~ 312 (417)
T PRK06025 233 AFTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTL 312 (417)
T ss_pred CccccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh
Confidence 997 4787 89999999999999999999999999999999999999998888888
Q ss_pred CCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 316 MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 316 ~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
++.+|..+++++|+++|++++|||+||+||+|+.+.+.+++.||++++++|++||++++|||+|+||+++++++++||++
T Consensus 313 ~~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~ 392 (417)
T PRK06025 313 MLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELER 392 (417)
T ss_pred hcccHHHHHHHHHHHcCCCHHHCcEEEEchHHHHHHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCceeeEEEeecccceeEEEEEE
Q 013344 396 RGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 396 ~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
++. ++|++++|+|+|++.+++|++
T Consensus 393 ~g~--~~Gl~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 393 RGL--KRGLVTMCAAGGMAPAIIIER 416 (417)
T ss_pred hCC--CeEEEEEEeeccceeEEEEEe
Confidence 875 999999999999999999997
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-69 Score=505.06 Aligned_cols=364 Identities=39% Similarity=0.630 Sum_probs=337.0
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
++++|+||++.|||++- ++|+++..+..+|..-|++.||+++.++++|++-|++|++.+... |++|+|++++-.|||.
T Consensus 4 ~~k~V~IVsaARTPIGs-F~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~Anl-GQapaRQaalgAGlp~ 81 (396)
T KOG1390|consen 4 SSKDVFIVSAARTPIGS-FRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANL-GQAPARQAALGAGLPY 81 (396)
T ss_pred CCCceEEEeeccccccc-cccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhcccccccc-CcchHHHHHhhcCCCc
Confidence 45799999999999995 889999999999999999999999999999999999999999987 9999999999999999
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccch-------------------hhhhhhccccchh
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKVK-------------------AFEQAQNCLLPMG 180 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~~-------------------~~~~~~~~~~~mg 180 (445)
+++++++|..|+||+.|+.+|++.|+.|..|++ .|+ |++. +...+....++||
T Consensus 82 sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG 161 (396)
T KOG1390|consen 82 SVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHMG 161 (396)
T ss_pred ceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCCeeeeechhhcchHHHhccCCcc
Confidence 999999999999999999999999999999998 121 2111 0011122346899
Q ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCC
Q 013344 181 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 260 (445)
Q Consensus 181 ~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~ 260 (445)
.++|+.+++|+||||+||.|++.||.|+..+|++|.|..||+||+++.+. ..+++++||.+++..+.+++.+++
T Consensus 162 ~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~r------g~~~v~~DEe~~k~~~~~~~~~l~ 235 (396)
T KOG1390|consen 162 ICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKR------GETVVKKDEEPKKGSNIEKLSKLR 235 (396)
T ss_pred hhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCC------CcEEeccchhhhcccchhhhcccc
Confidence 99999999999999999999999999999999999999999999997643 247899999999999999999999
Q ss_pred CcccC-CCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 013344 261 PVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 261 p~~~~-~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID 339 (445)
|+|.. +|++|.+|.|.++|||+|+||++.+.+.+++++|+++|++|+.....|..+.++|..+++++|+++||..+|||
T Consensus 236 ~vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP~laipk~lk~aG~~~sdVd 315 (396)
T KOG1390|consen 236 PVFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAPALAIPKALKKAGLEQSDVD 315 (396)
T ss_pred ceeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccchHHHHHHHHHHcCcchhhhh
Confidence 99965 56799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEE
Q 013344 340 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 419 (445)
Q Consensus 340 ~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l 419 (445)
+||+||+|+...+...+.||++|+++|++||++++|||+|++|++.+.++++.|+++++ ++|+..+|.|+|.+.++++
T Consensus 316 ~~EiNEAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~~~g--~~GvAaiCnGGGgasa~vi 393 (396)
T KOG1390|consen 316 YWEINEAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQKGG--KIGVAAICNGGGGASAMVI 393 (396)
T ss_pred HHhhhhhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHhhCC--ceeEEEEecCCCceeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999988 9999999999998989988
Q ss_pred EE
Q 013344 420 ER 421 (445)
Q Consensus 420 ~~ 421 (445)
++
T Consensus 394 ek 395 (396)
T KOG1390|consen 394 EK 395 (396)
T ss_pred ec
Confidence 76
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-67 Score=531.86 Aligned_cols=364 Identities=45% Similarity=0.729 Sum_probs=327.4
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|||||++||||++ +.|.+++.++.+|+.+|+++||+++||+|+|||.|++|++++++.+..++++.+...+|++.+
T Consensus 2 m~~v~Ivg~~rtp~g~-~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~ 80 (394)
T PRK09051 2 MREVVVVSGVRTAIGT-FGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQE 80 (394)
T ss_pred CCcEEEEecccCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCC
Confidence 5789999999999997 467889999999999999999999999999999999999988664335688888888999766
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--cc-ch---------h--hhh----h-hcc--ccchhH
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PK-VK---------A--FEQ----A-QNC--LLPMGV 181 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~-~~---------~--~~~----~-~~~--~~~mg~ 181 (445)
+|+++|+++|+||+.|+..|+++|++|.+|++ + ++ +. +. + ..+ . .+. ..+||+
T Consensus 81 ~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (394)
T PRK09051 81 TPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGV 160 (394)
T ss_pred CceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHH
Confidence 99999999999999999999999999999998 1 11 11 00 0 000 0 111 226999
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
++++|+++||+|||++|.++++||+||.+|+.+|+|++||+|+.++.+ +++ +++++|+++|+++|+|+|.+++|
T Consensus 161 ~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~---~~~---~~~~~da~~r~~~t~e~v~~~~~ 234 (394)
T PRK09051 161 TAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTR---KGE---VVFDTDEHVRADTTLEDLAKLKP 234 (394)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCC---CCC---eEECCCCCCCCCCCHHHHcCCCC
Confidence 999999999999999999999999999999999999999999987532 121 67899999999999999999999
Q ss_pred cccCC-CccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 013344 262 VFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 340 (445)
Q Consensus 262 ~~~~~-G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~ 340 (445)
+|+++ |++|.+|||+++|||+++||++++.+++++.+|++++++++....+|..++.++..+++++|+++||+++|||+
T Consensus 235 v~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~ 314 (394)
T PRK09051 235 VFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERAGLTVADLDV 314 (394)
T ss_pred cccCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCCcccccHHHHHHHHHHHcCCCHHHcCE
Confidence 99876 89999999999999999999999999999999999999999888888888889999999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEE
Q 013344 341 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420 (445)
Q Consensus 341 ~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~ 420 (445)
||+||+|+.+.+.+.|.||++++++|++||++++|||+|+||++++.++++||+++++ ++|++++|+|+|++.+++|+
T Consensus 315 ~ei~d~f~~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~~~--~~g~~~~c~~gG~g~a~~~e 392 (394)
T PRK09051 315 IEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQRIGG--RYALVTMCIGGGQGIAAIFE 392 (394)
T ss_pred EEecCccHHHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccccChhhEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999887 99999999999999999998
Q ss_pred E
Q 013344 421 R 421 (445)
Q Consensus 421 ~ 421 (445)
+
T Consensus 393 ~ 393 (394)
T PRK09051 393 R 393 (394)
T ss_pred e
Confidence 7
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-68 Score=486.80 Aligned_cols=364 Identities=41% Similarity=0.652 Sum_probs=340.3
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~ 129 (445)
+-||||++.||+|+. +.|.+++.+..+|..-|++.||+.+++.++.||.||+|++.....++.+.+|++-+..|+|.+.
T Consensus 4 kgvfiVaAKRTaFGt-fGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~ 82 (396)
T KOG1391|consen 4 KGVFIVAAKRTAFGT-FGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKET 82 (396)
T ss_pred ceEEEEEeccccccc-ccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCcc
Confidence 579999999999996 7889999999999999999999999999999999999999988877889999999999999999
Q ss_pred ceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ec--Ccc--------------------chhhhhhhccccchhH
Q 013344 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SV--NPK--------------------VKAFEQAQNCLLPMGV 181 (445)
Q Consensus 130 ~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~--~~~--------------------~~~~~~~~~~~~~mg~ 181 (445)
|+.+||+-|.||.+++..+++.|.-|+.+++ .+ .|. ++....+..+.+||++
T Consensus 83 pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~ 162 (396)
T KOG1391|consen 83 PALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAM 162 (396)
T ss_pred CceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhh
Confidence 9999999999999999999999999999998 11 111 1111234456789999
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
|+|+++.+|.||||+.|+|++.|++++.+++.+|+|++||+||+++.+. ++.++.-||.+||..|+|.|.+++|
T Consensus 163 TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kk------ge~~f~vDEHpRp~TT~E~L~KLpp 236 (396)
T KOG1391|consen 163 TAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKK------GEQTFQVDEHPRPQTTLEQLQKLPP 236 (396)
T ss_pred hHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeecc------CceeeEecCCCCccchHHHHhhCCc
Confidence 9999999999999999999999999999999999999999999997643 2367888999999999999999999
Q ss_pred cccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 013344 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 341 (445)
Q Consensus 262 ~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~ 341 (445)
+|.+||.+|++|.|.++|||+|+|+++++..++++++|++++++|...+++|.+||++|..+|+.+|+++|++.+|||++
T Consensus 237 vFkKdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGIGPvPAI~~vLKksGlkl~DiDl~ 316 (396)
T KOG1391|consen 237 VFKKDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIGPVPAISGVLKKSGLKLKDIDLV 316 (396)
T ss_pred hhccCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccccCcHHHHHHHHHcCCcccccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 342 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 342 e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
|+|++|+.+.+.+.+.|+++.+++|.+||++++|||+|++|++....++|+|++++. ++|+.+.|+|+|++.+++|+.
T Consensus 317 EvNEAFApQ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr~~--KYgiGSACIGGGQGIA~l~e~ 394 (396)
T KOG1391|consen 317 EVNEAFAPQYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRRGG--KYGIGSACIGGGQGIAVLIES 394 (396)
T ss_pred EechhhchHHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHcCC--ccccccccccCCceEEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999998 999999999999999999886
Q ss_pred c
Q 013344 422 G 422 (445)
Q Consensus 422 ~ 422 (445)
.
T Consensus 395 ~ 395 (396)
T KOG1391|consen 395 T 395 (396)
T ss_pred c
Confidence 3
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-67 Score=530.85 Aligned_cols=364 Identities=41% Similarity=0.613 Sum_probs=327.8
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~-Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
|++|||+|+.||||+| +.|.+++.++.+|+.++++++|++ +||+|++||.|++|++.+...++.++++.+++.+|+|.
T Consensus 1 m~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~ 79 (400)
T PRK13359 1 MTEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPH 79 (400)
T ss_pred CCcEEEEeccCCCccC-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCC
Confidence 4689999999999997 578999999999999999999996 59999999999999998776546789999999999998
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccc-h------h-h---hh---------h--hc--c
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKV-K------A-F---EQ---------A--QN--C 175 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~-~------~-~---~~---------~--~~--~ 175 (445)
++|+++|+++|+||++|+.+|+++|++|++|++ .++ +.+ . . . .+ . .+ .
T Consensus 80 ~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
T PRK13359 80 GVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYG 159 (400)
T ss_pred CCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccccccc
Confidence 899999999999999999999999999999999 221 110 0 0 0 00 0 01 1
Q ss_pred ccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHH
Q 013344 176 LLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSE 255 (445)
Q Consensus 176 ~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~ 255 (445)
..+||.++|+++++||+|||++|.++++||+|+..++..|+|++||+||+++.+ +| ..++++.|+.+|+ +|+|+
T Consensus 160 ~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~---~~--~~~~~~~De~~r~-~t~e~ 233 (400)
T PRK13359 160 VDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQK---KG--DPLVVSRDEHPRE-TTLEA 233 (400)
T ss_pred cCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccC---CC--CceeecCCCCCCC-CCHHH
Confidence 236999999999999999999999999999999999999999999999987431 22 1256899999997 99999
Q ss_pred HhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCC
Q 013344 256 LAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQL 335 (445)
Q Consensus 256 l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~ 335 (445)
|.+++|+|+|+|++|.+|+|+++|||+++||++++.|++++.++++++++++....+|..++.++..+++++|+++||++
T Consensus 234 l~~l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~ 313 (400)
T PRK13359 234 LAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTL 313 (400)
T ss_pred HhcCCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCCccchhHHHHHHHHHHHhCCCH
Confidence 99999999999999999999999999999999999999999999999999998878888899999999999999999999
Q ss_pred CCccEEEecCCChHHHHHHHHHcCCCC--CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccc
Q 013344 336 DDIDLFEINEAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGM 413 (445)
Q Consensus 336 ~DID~~e~h~~~~~~~~~~~e~LGl~~--~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~ 413 (445)
+|||+||+||+|+.+.+.++|.||+++ .++|++||.+++|||+|+||++++.++++||+++++ ++|++++|+|+|+
T Consensus 314 ~DID~iei~dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~~~--~~g~~~~c~~gG~ 391 (400)
T PRK13359 314 DQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERTGG--RFALCTMCIGVGQ 391 (400)
T ss_pred HHcCcCccCcHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhcCC--CeEEEEEcccCCc
Confidence 999999999999999999999999964 799999999999999999999999999999999887 9999999999999
Q ss_pred eeEEEEEE
Q 013344 414 GAAAVFER 421 (445)
Q Consensus 414 ~~a~~l~~ 421 (445)
+.+++|++
T Consensus 392 g~a~~ie~ 399 (400)
T PRK13359 392 GIAIAIER 399 (400)
T ss_pred eeEEEEEe
Confidence 99999997
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-66 Score=528.84 Aligned_cols=373 Identities=48% Similarity=0.720 Sum_probs=330.9
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~A-gi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~ 126 (445)
+|++|||+|++||||+|.+.|.+++.++.+|+.+|+++||+++ ||+++|||.|++|++.++..++.++++.+...+|++
T Consensus 4 ~m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~ 83 (399)
T PRK09052 4 QLQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLP 83 (399)
T ss_pred CCCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCC
Confidence 5689999999999999734578999999999999999999997 999999999999999887665667788777788997
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--ccchh----h---hh-h--hccccchhHhHHHHHH
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PKVKA----F---EQ-A--QNCLLPMGVTSENVAH 188 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~~~~----~---~~-~--~~~~~~mg~~ae~~a~ 188 (445)
..+|+++|+++|+||+.|+..|+++|++|++|++ + ++ +.+.. . .+ . ......|++++++|++
T Consensus 84 ~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 163 (399)
T PRK09052 84 NSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKVAE 163 (399)
T ss_pred CCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHHHH
Confidence 5589999999999999999999999999999998 1 21 10000 0 00 0 1112469999999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCC--CC--CCCCeeeccCCCCCCCCCHHHHhcCCCccc
Q 013344 189 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPK--TG--DEKPVTISVDDGIRPNTSVSELAKLKPVFK 264 (445)
Q Consensus 189 ~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~--~g--~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~ 264 (445)
+||+|||++|.++++||+||.+||++|+|+.||+|+++....|. +| +.+..++..|+++|++.|+|.|.+++|+|.
T Consensus 164 ~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~f~ 243 (399)
T PRK09052 164 QWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFA 243 (399)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCccC
Confidence 99999999999999999999999999999999999976532111 11 113356889999999999999999999999
Q ss_pred CCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 013344 265 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 344 (445)
Q Consensus 265 ~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h 344 (445)
++|++|.+|||+++|||+++||++++.+++++.++++++++++....+|..++.++..+++++|+++||+++|||++|+|
T Consensus 244 ~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~did~~ei~ 323 (399)
T PRK09052 244 NKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWIELN 323 (399)
T ss_pred CCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCCccchhHHHHHHHHHHHcCCCHHHcCEEEeC
Confidence 88999999999999999999999999999999999999999999888898888899999999999999999999999999
Q ss_pred CCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEEc
Q 013344 345 EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 422 (445)
Q Consensus 345 ~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~~ 422 (445)
|+|+.+.+.+.|.||+++.|+|++||++++|||+|+||++++.+++++|+++++ ++|++++|+|+|++.+++|++.
T Consensus 324 D~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~~~--~~g~~~~c~~gg~g~a~~~e~~ 399 (399)
T PRK09052 324 EAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRTNL--KYGMVTMCVGTGMGAAGIFERL 399 (399)
T ss_pred cHHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhcCC--CeEEEEEcccCCceeEEEEEeC
Confidence 999999999999999999999999999999999999999999999999999877 9999999999999999999873
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-66 Score=525.99 Aligned_cols=365 Identities=38% Similarity=0.557 Sum_probs=326.1
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|||+|++||||+| +.|.+++.++.||+.++++++|+++||+|++||.+++|++.+...|+.++++.+++.+|++.+
T Consensus 1 m~~V~Ivg~~rTpfgk-~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~ 79 (387)
T PRK07850 1 MGNPVIVEAVRTPIGK-RNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYH 79 (387)
T ss_pred CCcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCC
Confidence 4689999999999998 467899999999999999999999999999999999999875554456789999999999877
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccchhh------h-h-hhcc-ccchhHhHHHHHHHhC
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKVKAF------E-Q-AQNC-LLPMGVTSENVAHRFG 191 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~~~~------~-~-~~~~-~~~mg~~ae~~a~~~g 191 (445)
+|+++|+++|+||++|+..|++.|++|++|++ .++ +....+ . + ..+. ...|+.++|+|+++||
T Consensus 80 ~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~~yg 159 (387)
T PRK07850 80 VGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRG 159 (387)
T ss_pred CceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHHHhC
Confidence 99999999999999999999999999999998 222 101000 0 0 0111 2357889999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceeccc----CCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCC
Q 013344 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIV----DPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 267 (445)
Q Consensus 192 isre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~----~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G 267 (445)
+|||++|.++++||+||.+++.+|+|++||+|++++.. ||+... .+++.|+.+| ++|+|+|.+++|+| ++|
T Consensus 160 isre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~---~~~~~D~~~r-~~t~e~l~~l~p~~-~~~ 234 (387)
T PRK07850 160 ITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGET---RLVTRDQGLR-DTTMEGLAGLKPVL-EGG 234 (387)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCc---eEeecCCCcc-cCCHHHhccCCCCC-CCC
Confidence 99999999999999999999999999999999987643 444322 3688999999 89999999999999 678
Q ss_pred ccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 013344 268 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAF 347 (445)
Q Consensus 268 ~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~ 347 (445)
.+|.+|||+++|||+|+||++++.+++++.++.+++.+++....+|..+..++..+++++|+++||+++|||++|+||+|
T Consensus 235 ~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~F 314 (387)
T PRK07850 235 IHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAKVLEKAGMKIGDIDLVEINEAF 314 (387)
T ss_pred CccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchhhcchHHHHHHHHHHHcCCCHHHcCeeeecccc
Confidence 88999999999999999999999999999888889999988777788888889999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 348 ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 348 ~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
+.+.+.++|.||++.+|+|++||++++|||+|+||++++.++++||+++++ ++|++++|+|+|++.+++|++
T Consensus 315 ~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~--~~g~~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 315 ASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERTDK--STALITMCAGGALSTGTIIER 386 (387)
T ss_pred hHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhcCC--CeEEEEEccccCceeEEEEEe
Confidence 999999999999999999999999999999999999999999999999877 999999999999999999987
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-66 Score=526.73 Aligned_cols=371 Identities=47% Similarity=0.747 Sum_probs=329.1
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|||||++||||+|+..|.+++.++.+|+.+|+++||+++|+.+++||.+++|++.++..++.++++.++..+|++.+
T Consensus 1 M~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~ 80 (391)
T PRK07661 1 MREAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYT 80 (391)
T ss_pred CCcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCC
Confidence 46899999999999986568899999999999999999999998889999999999887765456788888889999756
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--ccch---h-hh---h-hhccccchhHhHHHHHHHhCC
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PKVK---A-FE---Q-AQNCLLPMGVTSENVAHRFGV 192 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~~~---~-~~---~-~~~~~~~mg~~ae~~a~~~gi 192 (445)
+|+++|+++|+||+.|+..|+++|++|.+|++ + ++ +... . .. + ...+...|++++++|+++||+
T Consensus 81 ~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~ 160 (391)
T PRK07661 81 VPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGI 160 (391)
T ss_pred cceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999998 1 21 1000 0 00 0 111223489999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccC-CCCCC--CCCeeeccCCCCCCCCCHHHHhcCCCcccCCCcc
Q 013344 193 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVD-PKTGD--EKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 269 (445)
Q Consensus 193 sre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~-~~~g~--~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~ 269 (445)
|||++|.++++||+||.+||++|+|+.||+||+++.++ .++++ ....+++.|+++|++.|+|.|.+++|+|.++|++
T Consensus 161 tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g~l 240 (391)
T PRK07661 161 SREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSV 240 (391)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCCCCCE
Confidence 99999999999999999999999999999999876420 00110 1126789999999999999999999999888999
Q ss_pred ccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 013344 270 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS 349 (445)
Q Consensus 270 t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~ 349 (445)
|.+|||+++|||+|+||++++.|++++.++++++++++.....|..++.++..+++++|+++||+++|||+||+||+|+.
T Consensus 241 t~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~f~~ 320 (391)
T PRK07661 241 TAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSDIGLFELNEAFAS 320 (391)
T ss_pred eccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCcccchHHHHHHHHHHHHcCCCHHHCCEEEeCCHHHH
Confidence 99999999999999999999999999999999999999988888888888899999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 350 QFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 350 ~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
+.+.++|.||++++++|++||++++|||+|+||++++.++++||+++++ ++|+.++|+|+|++.+++|++
T Consensus 321 ~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~~~--~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 321 QSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRRNE--QFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred HHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEccccChhhEEEEEe
Confidence 9999999999999999999999999999999999999999999999887 999999999999999999987
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-66 Score=527.82 Aligned_cols=364 Identities=40% Similarity=0.626 Sum_probs=325.2
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|||+|++||||+| +.|.+++.++.+|+.+|+++||+++||+|+|||.|++|++++... +.++++.++..+|++.+
T Consensus 1 M~~v~Ivg~~rTpfg~-~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~Gl~~~ 78 (393)
T PRK08235 1 MSKTVIVSAARTPFGK-FGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQ-GQIPSRQAARAAGIPWE 78 (393)
T ss_pred CCcEEEEecCcCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCC-CCCHHHHHHHHcCCCCC
Confidence 4689999999999997 567899999999999999999999999999999999999987443 56888888889999767
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--ccch---hh---------h-----hh-hc--cccchh
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PKVK---AF---------E-----QA-QN--CLLPMG 180 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~~~---~~---------~-----~~-~~--~~~~mg 180 (445)
+|+++|+++|+||++||..|+++|++|.++++ + ++ +.+. .+ . +. .+ ....|+
T Consensus 79 ~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (393)
T PRK08235 79 VQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMG 158 (393)
T ss_pred cceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHH
Confidence 99999999999999999999999999999998 1 21 1000 00 0 00 01 123599
Q ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCC
Q 013344 181 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 260 (445)
Q Consensus 181 ~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~ 260 (445)
.++|+|+++||+|||++|.++++||+||.+|+.+|+|++||+|+++..| +| +.+++++|+++|+++|+|++.+++
T Consensus 159 ~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~---~~--~~~~~~~da~~r~~~t~e~~~~~~ 233 (393)
T PRK08235 159 VYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQR---KG--DPIVVAKDEAPRKDTTIEKLAKLK 233 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCC---CC--CceEeCCCCCCCCCCCHHHHhcCC
Confidence 9999999999999999999999999999999999999999999987532 12 225688999999999999999999
Q ss_pred CcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 013344 261 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 340 (445)
Q Consensus 261 p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~ 340 (445)
|+|+|+|++|.+|||+++|||+|+||++++.+++++.++++++.+++....++..+...+..+++++|+++||+++|||+
T Consensus 234 ~v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ 313 (393)
T PRK08235 234 PVFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDL 313 (393)
T ss_pred CcccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhhhcchHHHHHHHHHHHhCCCHHHCCe
Confidence 99999999999999999999999999999999999999998999887766666667777889999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEE
Q 013344 341 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420 (445)
Q Consensus 341 ~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~ 420 (445)
+|+||+|+.+.+.++|.||++++++|++||++++|||+|+||++++.++++||+++++ ++|+.++|+|+|++.+++|+
T Consensus 314 ~e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~~~--~~g~~~~c~~gG~g~a~~~e 391 (393)
T PRK08235 314 FEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRGG--GIGIAAICSGGGQGDAVLIE 391 (393)
T ss_pred ehhcchhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEcccccceEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999888 89999999999999999998
Q ss_pred E
Q 013344 421 R 421 (445)
Q Consensus 421 ~ 421 (445)
+
T Consensus 392 ~ 392 (393)
T PRK08235 392 V 392 (393)
T ss_pred e
Confidence 7
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-66 Score=526.90 Aligned_cols=370 Identities=46% Similarity=0.741 Sum_probs=334.6
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|||+|++||||++++.+.+++.++.+|+.+|++++|+++||+|++||.|++|++.+++.+++++++.+.+.+|++.+
T Consensus 1 M~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~ 80 (392)
T PRK07108 1 MTEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVT 80 (392)
T ss_pred CCcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCC
Confidence 46899999999999987677889999999999999999999999999999999999998876455789999999999867
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccc-h----h--hh-h-hhccccchhHhHHHHHHHhC
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKV-K----A--FE-Q-AQNCLLPMGVTSENVAHRFG 191 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~-~----~--~~-~-~~~~~~~mg~~ae~~a~~~g 191 (445)
+|+++|+++|+||+.||..|+++|++|++|++ .++ +.. . . +. + ..+....|+.++|+++.+|+
T Consensus 81 ~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~~~ 160 (392)
T PRK07108 81 VPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVAKRYG 160 (392)
T ss_pred CceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999 222 111 0 0 00 0 01112468999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceec--ccCCCCC--CCCCeeeccCCCCCCCCCHHHHhcCCCcccCCC
Q 013344 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATK--IVDPKTG--DEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 267 (445)
Q Consensus 192 isre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~--~~~~~~g--~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G 267 (445)
++|+++|+|+..+|++|..+.++|+|++||+||... .+||+++ .++..+++.|+++|+++|+|+|.+++|+| +.|
T Consensus 161 i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~-~~g 239 (392)
T PRK07108 161 ISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL-PGG 239 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCC-CCC
Confidence 999999999999999999999999999999999764 3567655 44457899999999999999999999999 679
Q ss_pred ccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 013344 268 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAF 347 (445)
Q Consensus 268 ~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~ 347 (445)
++|.+|||+++|||+|+||++++.|++++.++++++++++....+|..++.++..+++++|+++||+++|||++|+||+|
T Consensus 240 ~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~eaf 319 (392)
T PRK07108 240 VITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAF 319 (392)
T ss_pred CCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCcccchhHHHHHHHHHHHcCCCHHHcCchHhhhHH
Confidence 99999999999999999999999999999999999999998888888888899999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 348 ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 348 ~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
+.+.+.++|.||++++|+|++||++++|||+|+||++.+..++++|+++++ ++|++++|+|+|++.+++|++
T Consensus 320 a~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~~~--~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 320 AVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRRGA--KYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred HHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhhCC--CEEEEEEccccChhhEEEEEe
Confidence 999999999999999999999999999999999999999999999998877 999999999999999999987
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-65 Score=525.80 Aligned_cols=366 Identities=41% Similarity=0.665 Sum_probs=326.4
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|||||++||||+| +.|.+++.++.||+.+|+++||+++||+++|||.|++|++.+... ++++++.++..+|++.+
T Consensus 1 m~~v~Ivg~~rTpfgk-~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~-~~~~a~~va~~~Gl~~~ 78 (404)
T PRK06205 1 MRDAVICEPVRTPVGR-FGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGE-APAIGRVAALDAGLPVT 78 (404)
T ss_pred CCceEEEEeecCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCC
Confidence 4689999999999997 568899999999999999999999999999999999999988775 56778888889999767
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCc--------cch----h--hhhh------h------ccc
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNP--------KVK----A--FEQA------Q------NCL 176 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~--------~~~----~--~~~~------~------~~~ 176 (445)
+|+++|+++|+||+.++..|+++|++|.++++ .++. ++. . ..+. . ...
T Consensus 79 ~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (404)
T PRK06205 79 VPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVP 158 (404)
T ss_pred CceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCC
Confidence 99999999999999999999999999999998 1110 000 0 0000 0 112
Q ss_pred cchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHH
Q 013344 177 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 256 (445)
Q Consensus 177 ~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l 256 (445)
..|+.++++|+++||+|||++|.++++||+||.++++.|+|++||+||++..+ +| +.+++++|+++|+++|+|++
T Consensus 159 ~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~---~~--~~~~~~~da~~r~~~t~e~~ 233 (404)
T PRK06205 159 GGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQR---KG--DPTVVDRDEHPRADTTLESL 233 (404)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCC---CC--CceEeccCCCCCCCCCHHHH
Confidence 34777899999999999999999999999999999999999999999987542 11 22568899999999999999
Q ss_pred hcCCCcc---cCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCC
Q 013344 257 AKLKPVF---KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGL 333 (445)
Q Consensus 257 ~~~~p~~---~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl 333 (445)
.+++|+| +|+|++|.+|||+++|||+|+||++++.|++++.++.+++.+++.....|..++.++..+++++|+++||
T Consensus 234 ~~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl 313 (404)
T PRK06205 234 AKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRMGIGPVPATEKALARAGL 313 (404)
T ss_pred hcCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCccccccHHHHHHHHHHHcCC
Confidence 9999999 5779999999999999999999999999999999998899999988777877888999999999999999
Q ss_pred CCCCccEEEecCCChHHHHHHHHHcCCCC---CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeec
Q 013344 334 QLDDIDLFEINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIG 410 (445)
Q Consensus 334 ~~~DID~~e~h~~~~~~~~~~~e~LGl~~---~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G 410 (445)
+++|||++|+||+|+.+.+.++|.|||++ +++|++||++++|||+|+||++++.++++||+++++ ++|++++|+|
T Consensus 314 ~~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~--~~gl~~~c~~ 391 (404)
T PRK06205 314 TLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRRQA--RYGLETMCIG 391 (404)
T ss_pred CHHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhcCC--CeEEEEEecc
Confidence 99999999999999999999999999998 589999999999999999999999999999999877 9999999999
Q ss_pred ccceeEEEEEEcc
Q 013344 411 TGMGAAAVFERGD 423 (445)
Q Consensus 411 ~G~~~a~~l~~~~ 423 (445)
+|++.+++|++..
T Consensus 392 gg~g~a~~~e~~~ 404 (404)
T PRK06205 392 GGQGLAAVFERVN 404 (404)
T ss_pred CChhhEEEEEecC
Confidence 9999999999863
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-66 Score=523.59 Aligned_cols=362 Identities=37% Similarity=0.645 Sum_probs=328.2
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~ 129 (445)
+|||||++.||||+| ++|.+++.++.+|+.++++++|+++||+|++||.+++|++.+... ++++++.+++.+|++.++
T Consensus 3 ~~~~iv~~~Rtp~~~-~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~-g~~~~r~~~~~~Gl~~~~ 80 (392)
T PRK06633 3 KPVYITHAKRTAFGS-FMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGS-GQNPARQTLIHAGIPKEV 80 (392)
T ss_pred CCEEEEeeccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCcccc-ccHHHHHHHHHCCCCCCc
Confidence 589999999999997 578999999999999999999999999999999999999987664 778899898999998779
Q ss_pred ceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--cc--c-h-----hh---h-----hhh-cc--ccchhHh
Q 013344 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PK--V-K-----AF---E-----QAQ-NC--LLPMGVT 182 (445)
Q Consensus 130 ~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~--~-~-----~~---~-----~~~-~~--~~~mg~~ 182 (445)
|+++|+++|+||+.|+..|+++|++|++|++ .++ +. . . .. . +.. +. ...|+++
T Consensus 81 p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (392)
T PRK06633 81 PGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGIT 160 (392)
T ss_pred cchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcchHHHH
Confidence 9999999999999999999999999999999 222 10 0 0 00 0 000 11 1258999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCc
Q 013344 183 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 262 (445)
Q Consensus 183 ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 262 (445)
+++|+++||+|||++|.++++||+||.+||++++|++||+|++++.++ |. .+++.|+.+|+..++|.|.+++|+
T Consensus 161 a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~---~~---~~~~~d~~~rp~~~~e~l~~l~p~ 234 (392)
T PRK06633 161 AENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKK---TT---SLFDHDETVRPDTSLEILSKLRPA 234 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCC---Cc---eeeccCCCCCCCCCHHHHccCCCc
Confidence 999999999999999999999999999999999999999999875321 21 568999999999999999999999
Q ss_pred ccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 013344 263 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 342 (445)
Q Consensus 263 ~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e 342 (445)
|+|+|++|.+|||+++|||+++||++++.+++++.++++++.+++....+|..++.++..+++++|+++||+++|||++|
T Consensus 235 ~~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~Al~~AGl~p~DID~~e 314 (392)
T PRK06633 235 FDKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALSKAGWSVNDLEVIE 314 (392)
T ss_pred cCCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcchhchHHHHHHHHHHHHcCCCHHHcCeee
Confidence 99899999999999999999999999999999999999999999998888888888889999999999999999999999
Q ss_pred ecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 343 INEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 343 ~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
+||+|+.+.+.+.+.||++..++|++||++++|||+|+||++++.++++||+++++ ++|++++|+|+|++.+++|++
T Consensus 315 i~dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~~~--~~g~~~~c~~gG~g~a~~~e~ 391 (392)
T PRK06633 315 VNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRAKA--KKGLVTLCIGGGMGMAMCVEA 391 (392)
T ss_pred hhhHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEecccChhheEEEEe
Confidence 99999999999999999999999999999999999999999999999999999887 999999999999999999987
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-65 Score=519.40 Aligned_cols=364 Identities=37% Similarity=0.604 Sum_probs=323.9
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|||||++||||+| +.|.+++.++.||+.+|++++|++++|+|++||.+++|++.+...++.++++.+.+..||+.+
T Consensus 1 m~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~ 79 (390)
T PRK06504 1 MAEAYIVAAARTAGGR-KGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPES 79 (390)
T ss_pred CCceEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 4689999999999997 568999999999999999999999999999999999999886544346789988888899888
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--cc-chh----------hh--hhhcc----ccchhHhH
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PK-VKA----------FE--QAQNC----LLPMGVTS 183 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~-~~~----------~~--~~~~~----~~~mg~~a 183 (445)
+|+++|+++|+||+.|+..|+++|++|.+|++ .++ +. ... .. ...+. ..+|+.++
T Consensus 80 vP~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa 159 (390)
T PRK06504 80 VPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGA 159 (390)
T ss_pred CceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHH
Confidence 99999999999999999999999999999999 222 11 000 00 00111 24799999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcc
Q 013344 184 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVF 263 (445)
Q Consensus 184 e~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~ 263 (445)
|+++++||+|||++|.|+++||+||.+|+++|+|++||+||++..+ +| ....+..||++|+++|+|+|.+++|++
T Consensus 160 e~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~---~~--~~~~~~~De~~r~~~t~e~l~~~~~~~ 234 (390)
T PRK06504 160 EMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRA---DG--SGEMHTVDEGIRFDATLEGIAGVKLIA 234 (390)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCC---CC--CceEEccCCCCCCCCCHHHHhcCCCCC
Confidence 9999999999999999999999999999999999999999987542 12 125688999999999999999999986
Q ss_pred cCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEe
Q 013344 264 KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343 (445)
Q Consensus 264 ~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~ 343 (445)
++|++|.+|||+++|||+|+||++++.|+++++++..++.++.....+|..+..++..+++++|+++||+++|||++|+
T Consensus 235 -~~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~Did~~Ei 313 (390)
T PRK06504 235 -EGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLYEV 313 (390)
T ss_pred -CCCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchhhhccHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 4589999999999999999999999999999988888888888777777778889999999999999999999999999
Q ss_pred cCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 344 h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
||+|+.+.+.++|.|||+++|+|++||++++|||+|+||++++.+++++|++.++ ++|+.++|.|+|++++++|++
T Consensus 314 ~d~Fa~~~l~~~e~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~~~--~~gl~~~~~ggg~g~a~ile~ 389 (390)
T PRK06504 314 NEAFASVPLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQRGK--RYGLQTMCEGGGMANVTIVER 389 (390)
T ss_pred cccchHHHHHHHHHhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhhCC--CeEEEEEeecccceeEEEEEe
Confidence 9999999999999999999999999999999999999999999999999998877 999999999889999988876
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-66 Score=524.70 Aligned_cols=355 Identities=35% Similarity=0.566 Sum_probs=319.8
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++||+|+|||.+++|++.+... ++++++.++..+|++.+
T Consensus 1 M~~v~Ivg~~rTp~gr-~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~-~~~~a~~~~~~~Gl~~~ 78 (388)
T PRK06366 1 MKDVYIVSAKRTAIGK-FGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV-GQNPAGQAAYHAGLPFG 78 (388)
T ss_pred CCcEEEEEcccCCccc-CCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCc-cCcHHHHHHHHCCCCCC
Confidence 4689999999999997 457888999999999999999999999999999999999876553 55778888899999867
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--c-----cch-h-------h---hhhh--c----c--c
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--P-----KVK-A-------F---EQAQ--N----C--L 176 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~-----~~~-~-------~---~~~~--~----~--~ 176 (445)
+|.++++++|+||+.++..|+++|++|++|++ + ++ + ... . . .+.. . . .
T Consensus 79 ~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 158 (388)
T PRK06366 79 VTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYF 158 (388)
T ss_pred CcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccC
Confidence 89999999999999999999999999999999 1 22 0 000 0 0 0000 0 0 1
Q ss_pred cchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHH
Q 013344 177 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 256 (445)
Q Consensus 177 ~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l 256 (445)
.+|++++++|+++||+|||++|.+++++|+||.+||++|+|++||+|+. .++.|+++| ++|+|++
T Consensus 159 ~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~--------------~~~~d~~~r-~~t~e~~ 223 (388)
T PRK06366 159 EHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFN--------------DLDRDEGIR-KTTMEDL 223 (388)
T ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCccccccccc--------------ccccccCcc-cCCHHHH
Confidence 2479999999999999999999999999999999999999999999984 156899999 7999999
Q ss_pred hcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCC
Q 013344 257 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLD 336 (445)
Q Consensus 257 ~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~ 336 (445)
++++|+|+|+|++|.+|||+++|||+|+||++++.|++++.+|.+++++++....+|..+..++..+++++|+++||+++
T Consensus 224 ~~s~~v~~p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~ 303 (388)
T PRK06366 224 AKLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPATRKLLEKQNKSID 303 (388)
T ss_pred hhCCCccCCCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhcccHHHHHHHHHHHcCCCHH
Confidence 99999999999999999999999999999999999999999998899999988888888888889999999999999999
Q ss_pred CccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeE
Q 013344 337 DIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA 416 (445)
Q Consensus 337 DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a 416 (445)
|||++|+||+|+.+.+.++|.|||+.+|+|++||+|++|||+|+||++++.++++||+++++ ++|++++|+|+|++.+
T Consensus 304 DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~~--~~g~~~~c~~gg~g~a 381 (388)
T PRK06366 304 YYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRHM--KTGLATLCHGGGGAHT 381 (388)
T ss_pred HcceeeccchhHHHHHHHHHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcCC--CeEEEEEecccChhhE
Confidence 99999999999999999999999999999999999999999999999999999999999877 9999999999999999
Q ss_pred EEEEEc
Q 013344 417 AVFERG 422 (445)
Q Consensus 417 ~~l~~~ 422 (445)
++|++.
T Consensus 382 ~~~e~~ 387 (388)
T PRK06366 382 LTLEMV 387 (388)
T ss_pred EEEEec
Confidence 999974
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-65 Score=521.47 Aligned_cols=365 Identities=42% Similarity=0.642 Sum_probs=327.2
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~-Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
|++|||+|++||||+| +.|.+++.++.+|+.+|++++|++ +||+|++||.|++|++.+.+.++.++++.+++.+|++.
T Consensus 1 M~~V~Ivg~~rTpfgk-~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~ 79 (401)
T PRK09050 1 MTEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPV 79 (401)
T ss_pred CCcEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCC
Confidence 4689999999999997 467899999999999999999995 79999999999999987654334689999999999987
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--cc--------chhh---hh---------h--hc--c
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PK--------VKAF---EQ---------A--QN--C 175 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~--------~~~~---~~---------~--~~--~ 175 (445)
++|+++|+++|+||+.|+..|+++|++|++|++ .++ +. +... .+ . .+ .
T Consensus 80 ~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (401)
T PRK09050 80 SVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYG 159 (401)
T ss_pred CCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccccccc
Confidence 899999999999999999999999999999999 221 11 0000 00 0 01 1
Q ss_pred ccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHH
Q 013344 176 LLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSE 255 (445)
Q Consensus 176 ~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~ 255 (445)
..+||+++|+|+++||+|||+||.++..||+|+.++...|+|++||+||+++.+ +| +.+++++|+++|+++|+|+
T Consensus 160 ~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~---~~--~~~~~~~da~~r~~~t~e~ 234 (401)
T PRK09050 160 VDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQK---KG--DPVVVDRDEHPRPETTLEA 234 (401)
T ss_pred cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccC---CC--CceeeCCCCCCCCCCCHHH
Confidence 246899999999999999999999999999999999999999999999987642 22 2256889999999999999
Q ss_pred HhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCC
Q 013344 256 LAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQL 335 (445)
Q Consensus 256 l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~ 335 (445)
|.+++|+|+++|++|.+|||+++|||+++||++++.+++++.++.+++++++....+|..++.++..+++++|+++||++
T Consensus 235 l~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~ 314 (401)
T PRK09050 235 LAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMGIGPAPATRKLLARLGLTI 314 (401)
T ss_pred HhcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCH
Confidence 99999999988999999999999999999999999999999999999999998877888888888999999999999999
Q ss_pred CCccEEEecCCChHHHHHHHHHcCCCC--CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccc
Q 013344 336 DDIDLFEINEAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGM 413 (445)
Q Consensus 336 ~DID~~e~h~~~~~~~~~~~e~LGl~~--~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~ 413 (445)
+|||++|+||+|+.+.+.++|.||+++ .++|++||.+++|||+|+||++++.++++||+++++ ++|++++|+|+|+
T Consensus 315 ~DId~~ei~D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~~~--~~g~~~~c~~gG~ 392 (401)
T PRK09050 315 DQFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERTGG--RYALCTMCIGVGQ 392 (401)
T ss_pred HHCCccccCcHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhcCC--CeEEEEEcccccc
Confidence 999999999999999999999999976 699999999999999999999999999999999887 9999999999999
Q ss_pred eeEEEEEE
Q 013344 414 GAAAVFER 421 (445)
Q Consensus 414 ~~a~~l~~ 421 (445)
+.+++|++
T Consensus 393 g~a~~~e~ 400 (401)
T PRK09050 393 GIALAIER 400 (401)
T ss_pred eeEEEEEe
Confidence 99999987
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-65 Score=518.05 Aligned_cols=364 Identities=43% Similarity=0.706 Sum_probs=326.5
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|||||++||||+| +.|.++++++.+|+.+|+++||+++||+|++||.|++|++.+... ++++++.++..+|++.+
T Consensus 1 m~~v~Ivg~~rTpfgk-~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~-~~~~a~~va~~lGl~~~ 78 (393)
T PRK05656 1 MQDVVIVAATRTAIGS-FQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA-GQNPARQAAIKAGLPHS 78 (393)
T ss_pred CCcEEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCC-CCcHHHHHHHHcCCCCC
Confidence 4689999999999997 467899999999999999999999999999999999999876543 56788888899999755
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--ccc-h---------h---hh----h-hhc--cccchh
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PKV-K---------A---FE----Q-AQN--CLLPMG 180 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~~-~---------~---~~----~-~~~--~~~~mg 180 (445)
+|+++|+++|+||++++..|+++|++|.+|++ + ++ +.. . . +. + ..+ ....|+
T Consensus 79 ~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 158 (393)
T PRK05656 79 VPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMG 158 (393)
T ss_pred cceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHH
Confidence 89999999999999999999999999999998 1 11 110 0 0 00 0 011 124699
Q ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCC
Q 013344 181 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 260 (445)
Q Consensus 181 ~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~ 260 (445)
+++|+|+++||+|||++|.++++||+||.+|+..++|++||+||++..+. .+.++++.|+++|+++|+|.|.+++
T Consensus 159 ~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~-----~~~~~~~~D~~~r~~~~~e~l~~l~ 233 (393)
T PRK05656 159 ITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRK-----GEPLAFATDEQPRAGTTAESLAKLK 233 (393)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCC-----CCceEeccCCCCCCCCCHHHHhcCC
Confidence 99999999999999999999999999999998889999999999774321 1225678999999999999999999
Q ss_pred CcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 013344 261 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 340 (445)
Q Consensus 261 p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~ 340 (445)
|+|.++|.+|.+|+|+++|||+++||++++.|++++.++++++++++.....|..++.++..+++++|+++||+++|||+
T Consensus 234 p~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 313 (393)
T PRK05656 234 PAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDL 313 (393)
T ss_pred CCcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCCcccchhHHHHHHHHHHHcCCCHHHCCE
Confidence 99988899999999999999999999999999999999999999999888888888889999999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEE
Q 013344 341 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420 (445)
Q Consensus 341 ~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~ 420 (445)
+|+||+|+.+.+.+.|.||++++++|++||++++|||+|+||++++.+++++|+++++ ++|++++|+|+|++.+++||
T Consensus 314 ~e~~d~f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~~~--~~gl~~~c~~gG~g~a~~~e 391 (393)
T PRK05656 314 IEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRRDA--KKGLATLCIGGGQGVALAIE 391 (393)
T ss_pred EEecCccHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHHcCC--CEEEEEEcccCcceEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999998877 99999999999999999998
Q ss_pred E
Q 013344 421 R 421 (445)
Q Consensus 421 ~ 421 (445)
+
T Consensus 392 ~ 392 (393)
T PRK05656 392 R 392 (393)
T ss_pred c
Confidence 7
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-65 Score=515.84 Aligned_cols=364 Identities=45% Similarity=0.667 Sum_probs=323.5
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~-Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~ 129 (445)
+|||||++||||+|.+.|++++.++.+|+.+|++++|++ +||+|++||.+++|++.+...++.++++.+.+..|+|.++
T Consensus 1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~ 80 (385)
T TIGR02445 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS 80 (385)
T ss_pred CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence 499999999999986678899999999999999999996 5999999999999998754444567899888899999889
Q ss_pred ceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccch--h----hhhh-hccccchhHhHHHHHHHhCCCH
Q 013344 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKVK--A----FEQA-QNCLLPMGVTSENVAHRFGVTR 194 (445)
Q Consensus 130 ~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~~--~----~~~~-~~~~~~mg~~ae~~a~~~gisr 194 (445)
|+++|+++|+||+.|+..|+++|++|++|++ .++ +... . +.+. .+....|++++++|+++||+||
T Consensus 81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitr 160 (385)
T TIGR02445 81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMHGISR 160 (385)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHHHhCCCH
Confidence 9999999999999999999999999999999 121 1110 0 0000 1112469999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC-CCccccCC
Q 013344 195 KEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTTAGN 273 (445)
Q Consensus 195 e~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~-~G~~t~~~ 273 (445)
|++|.++++||+||.+|+++|+|++||+||+++.++ ++ .+++++|+++|+++|+|++.+++|+|+| +|++|.+|
T Consensus 161 e~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~---~~--~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~ 235 (385)
T TIGR02445 161 EQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDAD---GF--LKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGT 235 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCC---CC--ceeeCCCCCCCCCCCHHHHhcCCceecCCCCceeccc
Confidence 999999999999999999999999999999886431 21 2568899999999999999999999998 89999999
Q ss_pred CCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHH
Q 013344 274 SSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVY 353 (445)
Q Consensus 274 ~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~ 353 (445)
||+++|||+++||++++.+++++.++.+++.+++..+.+|..++.++..+++++|+++||+++|||++|+||+|+.+.+.
T Consensus 236 ~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~~~l~ 315 (385)
T TIGR02445 236 SSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQALP 315 (385)
T ss_pred CCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEEccccHHHHHH
Confidence 99999999999999999999999999899999998877787777788899999999999999999999999999999999
Q ss_pred HHHHcCCCC---CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 354 CRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 354 ~~e~LGl~~---~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
++|.|||++ .++|++||++++|||+|+||++++.+++++|.++++ ++|++++|+|+|++.+++|++
T Consensus 316 ~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~~~~--~~Gl~~~~~g~g~g~a~~~e~ 384 (385)
T TIGR02445 316 CLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQKDA--TFGLATMCIGLGQGIATVFER 384 (385)
T ss_pred HHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCC--CeEEEEEecccChhheEEEEe
Confidence 999999976 699999999999999999999999999977766655 899999999999999999987
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-64 Score=517.18 Aligned_cols=366 Identities=42% Similarity=0.694 Sum_probs=325.2
Q ss_pred CCcEEEEEeeeeccccCC-----CCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHc
Q 013344 49 GDDVVIVAAYRTALCKSK-----RGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYA 123 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~-----~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~l 123 (445)
|++|+|||++||||+|+. .|++++.++.+|+.+|+++||+++||+|+|||.+++|++.+++.+..++++.+.+..
T Consensus 1 m~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a 80 (394)
T PRK06445 1 LEDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLA 80 (394)
T ss_pred CCcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHc
Confidence 468999999999999853 589999999999999999999999999999999999998876432346677777777
Q ss_pred CCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--cc-----c-hh---h--hhh--hc--cccchh
Q 013344 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PK-----V-KA---F--EQA--QN--CLLPMG 180 (445)
Q Consensus 124 Gl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~-----~-~~---~--~~~--~~--~~~~mg 180 (445)
+++.++|+++|+++|+||+.++..|+++|++|.+|++ + ++ +. . .. . +.. .+ ...+|+
T Consensus 81 ~~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 160 (394)
T PRK06445 81 RLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMG 160 (394)
T ss_pred CCCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHH
Confidence 7776799999999999999999999999999999999 1 22 10 0 00 0 000 11 123599
Q ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCC
Q 013344 181 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 260 (445)
Q Consensus 181 ~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~ 260 (445)
+++++|+++||+|||++|.+++++|+||.+|+..|+|++||+|+++. ++|+. +++++|+++|+++|+|+|.+++
T Consensus 161 ~~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~----~~~~~--~~~npda~~r~~~t~e~~~~~~ 234 (394)
T PRK06445 161 LTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVE----VEGKK--KVVDVDQSVRPDTSLEKLAKLP 234 (394)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEec----CCCCc--eeeCCCCCCCCCCCHHHHhcCC
Confidence 99999999999999999999999999999999999999999999872 22322 5678999999999999999999
Q ss_pred CcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 013344 261 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 340 (445)
Q Consensus 261 p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~ 340 (445)
|+|+|+|++|.+|||+++|||+++||++++.+++++.++++++.+++....+|..++.++..+++++|+++|++++|||+
T Consensus 235 ~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~ 314 (394)
T PRK06445 235 PAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPVPASKKALEKAGLSVKDIDL 314 (394)
T ss_pred CccCCCCcEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCchhcchHHHHHHHHHHHcCCCHHHcCE
Confidence 99998899999999999999999999999999999999989999999888788778888999999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEE
Q 013344 341 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420 (445)
Q Consensus 341 ~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~ 420 (445)
+|+||+|+.+.+.++|.|||+++++|++||++++|||+|+||++++.++++||+.+++ ++|++++|+|+|++.+++|+
T Consensus 315 ~e~~d~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~--~~gl~~~~~~gg~g~a~~~e 392 (394)
T PRK06445 315 WEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQIKGK--DYGVATLCVGGGQGGAVVLE 392 (394)
T ss_pred EEecccchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHhcCC--CEEEEEEcccCChhhEEEEE
Confidence 9999999999999999999999999999999999999999999999999999997766 89999999999999999998
Q ss_pred Ec
Q 013344 421 RG 422 (445)
Q Consensus 421 ~~ 422 (445)
+.
T Consensus 393 ~~ 394 (394)
T PRK06445 393 RV 394 (394)
T ss_pred cC
Confidence 73
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-65 Score=515.97 Aligned_cols=363 Identities=42% Similarity=0.657 Sum_probs=323.8
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~-Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~ 129 (445)
+|||+|++||||+| +.|.+++.++.+|+.+|++++|++ ++|+|++||.+++|++.+...++.++++.+++.+|++.++
T Consensus 2 ~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~ 80 (400)
T TIGR02430 2 EAYICDAIRTPIGR-YGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV 80 (400)
T ss_pred cEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 69999999999997 457899999999999999999995 7999999999999998765433468999999999998779
Q ss_pred ceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--cc--------chhh---hh-----------hhc--ccc
Q 013344 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PK--------VKAF---EQ-----------AQN--CLL 177 (445)
Q Consensus 130 ~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~--------~~~~---~~-----------~~~--~~~ 177 (445)
|+++|+++|+||+.|+..|+++|++|++|++ .++ +. +... .+ ..+ ...
T Consensus 81 p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
T TIGR02430 81 PGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVD 160 (400)
T ss_pred ceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccccccccC
Confidence 9999999999999999999999999999999 221 10 0000 00 001 123
Q ss_pred chhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHh
Q 013344 178 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 257 (445)
Q Consensus 178 ~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~ 257 (445)
.||.++|+|+++||+|||+||.++++||+||.+++.+|+|++||+||.++.+. ++ ..++++|+++|+++|+|++.
T Consensus 161 ~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~---~~--~~~~n~da~~r~~~t~e~l~ 235 (400)
T TIGR02430 161 SMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKK---GE--PTVVDQDEHPRPETTLEGLA 235 (400)
T ss_pred cHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCC---CC--ceeeCCCCccCCCCCHHHHh
Confidence 68999999999999999999999999999999999999999999999875321 10 13578999999999999999
Q ss_pred cCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCC
Q 013344 258 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDD 337 (445)
Q Consensus 258 ~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~D 337 (445)
+++|+|+|+|++|.+|||+++|||+++||++++.|++++.++.+++.+++.....|..++.++..+++++|+++||+++|
T Consensus 236 ~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~D 315 (400)
T TIGR02430 236 KLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLLARAGLSIDQ 315 (400)
T ss_pred cCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccchHHHHHHHHHHHhCCCHHH
Confidence 99999998899999999999999999999999999999988889999998877777778888899999999999999999
Q ss_pred ccEEEecCCChHHHHHHHHHcCCCC--CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeeccccee
Q 013344 338 IDLFEINEAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA 415 (445)
Q Consensus 338 ID~~e~h~~~~~~~~~~~e~LGl~~--~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~ 415 (445)
||++|+||+|+.+.+.++|.||+++ .++|++||++++|||+|+||++++.++++||+++++ ++|++++|+|+|++.
T Consensus 316 ID~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~~~--~~g~~~~c~~gG~g~ 393 (400)
T TIGR02430 316 FDVIELNEAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERSGG--RYALCTMCIGVGQGI 393 (400)
T ss_pred CCCcccCcHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccccChhh
Confidence 9999999999999999999999976 699999999999999999999999999999999887 999999999999999
Q ss_pred EEEEEE
Q 013344 416 AAVFER 421 (445)
Q Consensus 416 a~~l~~ 421 (445)
+++|++
T Consensus 394 a~~~e~ 399 (400)
T TIGR02430 394 ALAIER 399 (400)
T ss_pred EEEEEe
Confidence 999987
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-64 Score=514.15 Aligned_cols=366 Identities=42% Similarity=0.660 Sum_probs=325.2
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|||+|+.||||+| +.|.+++.++.+|+.+|+++||+++||+|++||.+++|++.++..++.++++.++..+|+|.+
T Consensus 1 ~~~v~Iv~~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~ 79 (401)
T PRK08131 1 MLDAYIYDGLRSPFGR-HAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVT 79 (401)
T ss_pred CCcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCC
Confidence 5689999999999997 467899999999999999999999999999999999999977665456788888899999878
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccch---------h---hhhh-------h-----ccc
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKVK---------A---FEQA-------Q-----NCL 176 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~~---------~---~~~~-------~-----~~~ 176 (445)
+|+++|+++|+||+.|+..|+++|++|++|++ .++ +.+. . +... . ...
T Consensus 80 ~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (401)
T PRK08131 80 VPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGN 159 (401)
T ss_pred CceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCccccccccc
Confidence 99999999999999999999999999999999 121 1000 0 0000 0 112
Q ss_pred cchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHH
Q 013344 177 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 256 (445)
Q Consensus 177 ~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l 256 (445)
.+||+++|+|+++||+|||++|.++++||+++.++...++|++||+|+++... .++ ...++..|+++|+++|+|.|
T Consensus 160 ~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~--~~~--~~~~v~~De~~r~~~~~e~L 235 (401)
T PRK08131 160 DSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQG--RKL--PPKLVAEDEHPRPSSTVEAL 235 (401)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccc--cCC--CceEEecCCCCCCCCCHHHH
Confidence 35889999999999999999999999999999999999999999999976321 011 11458899999999999999
Q ss_pred hcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCC
Q 013344 257 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLD 336 (445)
Q Consensus 257 ~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~ 336 (445)
.+++|+| ++|++|.+|||+++|||+|+||++++.+++++.++.+++++++....+|..++.++..+++++|+++||+++
T Consensus 236 ~~l~p~f-~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~ 314 (401)
T PRK08131 236 TKLKPLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLD 314 (401)
T ss_pred hcCCCCC-CCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHH
Confidence 9999999 569999999999999999999999999999999999999999988888888888999999999999999999
Q ss_pred CccEEEecCCChHHHHHHHHHcCCC--CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccce
Q 013344 337 DIDLFEINEAFASQFVYCRNKLGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 414 (445)
Q Consensus 337 DID~~e~h~~~~~~~~~~~e~LGl~--~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~ 414 (445)
|||++|+||+|+.+.+.++|.|||+ ..|+|++||+|++|||+|+||.+++.++++||+++++ ++++..+|.|+|++
T Consensus 315 did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~~~--~~~~~~~~~ggg~g 392 (401)
T PRK08131 315 DMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRRGK--RYAVVSLCIGVGQG 392 (401)
T ss_pred HCCeehhccHHHHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhcCC--CceEEEEEecCChh
Confidence 9999999999999999999999996 4589999999999999999999999999999999877 88999999999999
Q ss_pred eEEEEEEc
Q 013344 415 AAAVFERG 422 (445)
Q Consensus 415 ~a~~l~~~ 422 (445)
++++|++.
T Consensus 393 ~a~i~e~~ 400 (401)
T PRK08131 393 LAMVIERV 400 (401)
T ss_pred hEEEEEec
Confidence 99999984
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-64 Score=511.12 Aligned_cols=366 Identities=44% Similarity=0.674 Sum_probs=325.0
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~-Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
|++|+|+|++||||+|++.|.+++..+.+|+.++++++|++ +||+|++||.+++|++.+...++.++++.+.+.+|++.
T Consensus 1 M~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~ 80 (387)
T PRK08947 1 MEDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPH 80 (387)
T ss_pred CCcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCC
Confidence 56899999999999986568999999999999999999996 79999999999999987544435678898889999986
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCc--cch--h-hhh--h--hccccchhHhHHHHHHHhCC
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNP--KVK--A-FEQ--A--QNCLLPMGVTSENVAHRFGV 192 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~--~~~--~-~~~--~--~~~~~~mg~~ae~~a~~~gi 192 (445)
++|+++|+++|+||+.|+..|+++|++|++|++ .++. ... . ... + .+....|++++++|+++||+
T Consensus 81 ~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygi 160 (387)
T PRK08947 81 SVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGI 160 (387)
T ss_pred CCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHHHhCC
Confidence 799999999999999999999999999999999 2221 100 0 000 0 11224699999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC-CCcccc
Q 013344 193 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTTA 271 (445)
Q Consensus 193 sre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~-~G~~t~ 271 (445)
|||++|.++++||+||.+|+.+|+|++||+||+++.+ ++. .+++++|+++|+++|+|+|++++|+|+| +|++|.
T Consensus 161 sre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~---~~~--~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~ 235 (387)
T PRK08947 161 SREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDA---DGV--LKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTA 235 (387)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCC---CCC--ceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEc
Confidence 9999999999999999999999999999999987642 121 2568899999999999999999999987 788999
Q ss_pred CCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH
Q 013344 272 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF 351 (445)
Q Consensus 272 ~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~ 351 (445)
+|||+++|||+|+||++++.+++++.++.+++.+++..+.+|..++.++..+++++|+++|++++|||++|+||+|+.+.
T Consensus 236 ~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~~~ 315 (387)
T PRK08947 236 GTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQS 315 (387)
T ss_pred cccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcccccccHHHHHHHHHHHcCCCHHHCCEEEecccchHHH
Confidence 99999999999999999999999998898899999988777777777888999999999999999999999999999999
Q ss_pred HHHHHHcCCCC---CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 352 VYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 352 ~~~~e~LGl~~---~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
+.++|.|||++ +++|++||++++|||+|+||++++.++++||++++. ++|++++|.|+|++.+++|++
T Consensus 316 l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~~~~--~~gl~~~~~g~G~g~a~~~e~ 386 (387)
T PRK08947 316 LPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMERKDA--QFGLATMCIGLGQGIATVFER 386 (387)
T ss_pred HHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCC--CEEEEEEeecccceeEEEEEe
Confidence 99999999976 599999999999999999999999999999998766 999999999999988888886
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-64 Score=510.59 Aligned_cols=362 Identities=36% Similarity=0.538 Sum_probs=322.5
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
.++|+|||++||||+| +.|.+++.++.||+.+|+++||+++||+|++||.|++|++.+++. +.++.+..++.+|+|.+
T Consensus 6 ~~~V~Ivg~~rTpf~k-~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~-~~~~~~~~~l~ag~~~~ 83 (397)
T PRK06954 6 QDPIVIASAARTPMAA-FQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQ-GQAPARQAALGAGLPLS 83 (397)
T ss_pred CCCEEEEecccCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCcc-chHHHHHHHHcCCCCCC
Confidence 3689999999999997 467889999999999999999999999999999999999887664 56777777788899877
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccchh-------------hh----hh-hc---cccch
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKVKA-------------FE----QA-QN---CLLPM 179 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~~~-------------~~----~~-~~---~~~~m 179 (445)
+|+++|+++|+||+.|+..|+++|++|.+|++ .++ +.+.. .. +. .+ ....|
T Consensus 84 ~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (397)
T PRK06954 84 VGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLM 163 (397)
T ss_pred ccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCH
Confidence 99999999999999999999999999999998 222 11000 00 00 01 13469
Q ss_pred hHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcC
Q 013344 180 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 259 (445)
Q Consensus 180 g~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~ 259 (445)
++++++|+++||+|||++|.++++||+|+.+++..+.|++||+|+++..+. + ..+++.|+++| .++.|++.++
T Consensus 164 ~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~---~---~~~v~~D~~pr-~~~~~~l~~l 236 (397)
T PRK06954 164 GTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKK---G---DTVIDRDEQPF-KANPEKIPTL 236 (397)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCC---C---CeEeccCCCcC-CCCHHHHhCC
Confidence 999999999999999999999999999999977788999999999764321 1 14688999999 4999999999
Q ss_pred CCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 013344 260 KPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 260 ~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID 339 (445)
+|+|+|+|++|.+|||+++|||+++||++++.+++++.+++.++++++.....|..+..++..+++++|+++||+++|||
T Consensus 237 ~~~f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did 316 (397)
T PRK06954 237 KPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLFEKNGWRAAEVD 316 (397)
T ss_pred CCccCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcccccchHHHHHHHHHHHcCCCHHHCC
Confidence 99999999999999999999999999999999999999999889888876667777888889999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEE
Q 013344 340 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 419 (445)
Q Consensus 340 ~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l 419 (445)
+||+||+|+.+.+.++|.|||+++++|++||++++|||+|+||++++.++++||+++++ +++++++|+|+|++.+++|
T Consensus 317 ~~ei~d~fa~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g--~~~v~~~c~~gg~g~a~~~ 394 (397)
T PRK06954 317 LFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRARGG--KRGVASLCIGGGEATAMGI 394 (397)
T ss_pred EEehhhHHHHHHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhcCC--CeEEEEEccccchhhEEEE
Confidence 99999999999999999999999999999999999999999999999999999999988 9999999999999999999
Q ss_pred EE
Q 013344 420 ER 421 (445)
Q Consensus 420 ~~ 421 (445)
++
T Consensus 395 e~ 396 (397)
T PRK06954 395 EL 396 (397)
T ss_pred Ee
Confidence 87
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-63 Score=513.55 Aligned_cols=362 Identities=37% Similarity=0.578 Sum_probs=320.1
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
.++|||+|++||||++ +.|.+++.++.+|+.+|++++|+++||+|++||.+++|++.+... +.++++.+++.+|++..
T Consensus 4 ~~~v~Ivg~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~-~~~~ar~~a~~aGl~~~ 81 (428)
T PRK08963 4 GDRIAIVSGLRTPFAK-QATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPE-APNIAREIVLGTGMNVH 81 (428)
T ss_pred CCeEEEEecccCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCC-ccHHHHHHHHHCCCCCC
Confidence 3689999999999997 468899999999999999999999999999999999999876543 56788888899999867
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccch-h-----h---------h------------h-h
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKVK-A-----F---------E------------Q-A 172 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~~-~-----~---------~------------~-~ 172 (445)
+|+++|+++|+||+.|+..|+++|++|.+|++ .++ +.+. . + . + .
T Consensus 82 ~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (428)
T PRK08963 82 TDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLL 161 (428)
T ss_pred CcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhcc
Confidence 99999999999999999999999999999999 121 1000 0 0 0 0 0
Q ss_pred --hc------cccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccC
Q 013344 173 --QN------CLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 244 (445)
Q Consensus 173 --~~------~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d 244 (445)
.. +...|++++++|+++||+|||++|.++++||+||.+|+.+|+|++||+||++. |+. .+++.|
T Consensus 162 ~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~---p~a-----~~~~~D 233 (428)
T PRK08963 162 PVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVP---PYK-----QPLEED 233 (428)
T ss_pred ccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEec---CCc-----eeeCCC
Confidence 00 01358999999999999999999999999999999999999999999999763 221 258899
Q ss_pred CCCCCCCCHHHHhcCCCcccC-CCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCC-CCCccHHH
Q 013344 245 DGIRPNTSVSELAKLKPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-IMGVGPAV 322 (445)
Q Consensus 245 ~~~r~~~t~e~l~~~~p~~~~-~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~-~~~~~~~~ 322 (445)
+++|+++|+|++.+++|+|+| +|++|.+|||+++|||+|+||++++.|++++.++.+++.+++....+|. .+..++..
T Consensus 234 ~~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~~ 313 (428)
T PRK08963 234 NNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAY 313 (428)
T ss_pred CCCCCCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhhhhhHHHH
Confidence 999999999999999999985 6899999999999999999999999999999999999999887765553 35667788
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcC-----------------CCCCCcCCCCChhcccChhhhHHHHH
Q 013344 323 AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG-----------------LDPEKINVNGGALAIGHPLGTTGARC 385 (445)
Q Consensus 323 ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LG-----------------l~~~~vn~~gG~la~Gh~~GatG~~~ 385 (445)
+++++|+++||+++|||++|+||+|+.+.+.++|.|| ++.+|+|++||++++|||+|+||+++
T Consensus 314 a~~~al~~AGl~~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~ 393 (428)
T PRK08963 314 ATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARM 393 (428)
T ss_pred HHHHHHHHcCCCHHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHH
Confidence 9999999999999999999999999999999999994 66679999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEEc
Q 013344 386 VATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 422 (445)
Q Consensus 386 i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~~ 422 (445)
+.++++||+++++ ++|++++|+|+|++.+++|+++
T Consensus 394 ~~e~~~qLrg~~g--~~gl~~~c~ggG~g~a~~ie~~ 428 (428)
T PRK08963 394 ITQTLHELRRRGG--GLGLTTACAAGGLGAAMVLEVE 428 (428)
T ss_pred HHHHHHHHhhcCC--CEEEEEEccccChhhEEEEEeC
Confidence 9999999999888 8999999999999999999985
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-62 Score=504.99 Aligned_cols=363 Identities=35% Similarity=0.551 Sum_probs=322.1
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
++++|||||++||||+| +.|.+++.++.+|+.++++++|++++|+|++||.+++|++.+... +.++++.+++.+|++.
T Consensus 5 ~~~~V~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~-~~~~ar~~~l~aGl~~ 82 (430)
T TIGR02446 5 QGERIAIVAGLRTPFAR-QATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPE-APNIAREIVLGTGMNV 82 (430)
T ss_pred cCCCEEEEecccCcccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCc-cchHHHHHHHhCCCCC
Confidence 44789999999999997 468899999999999999999999999999999999999876554 4678999999999987
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--c-cchh-------------hhhh-------------
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--P-KVKA-------------FEQA------------- 172 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~-~~~~-------------~~~~------------- 172 (445)
.+|+++|+++|+||+.|+.+|+++|++|.+|++ .++ + .+.. ....
T Consensus 83 ~~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (430)
T TIGR02446 83 HTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDL 162 (430)
T ss_pred CCchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhh
Confidence 899999999999999999999999999999999 232 1 0000 0000
Q ss_pred h--c-------cccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeecc
Q 013344 173 Q--N-------CLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISV 243 (445)
Q Consensus 173 ~--~-------~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~ 243 (445)
. + +..+|++++|+|+++||+|||++|.++++||+||.+|+..|.|++||+|+.. ||++ ..++.
T Consensus 163 ~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~---np~a-----~~~~~ 234 (430)
T TIGR02446 163 MPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFP---PPYK-----QWIAE 234 (430)
T ss_pred cccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeee---cCCc-----eEecc
Confidence 0 0 0236999999999999999999999999999999999999999999999864 3432 35889
Q ss_pred CCCCCCCCCHHHHhcCCCcccC-CCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCC-CCCCccHH
Q 013344 244 DDGIRPNTSVSELAKLKPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP-AIMGVGPA 321 (445)
Q Consensus 244 d~~~r~~~t~e~l~~~~p~~~~-~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p-~~~~~~~~ 321 (445)
|+++|+++|+|+|.+++|+|+| .|++|.+|||+++|||+|+||++++.+++++.++.+++.+++....+| ..+...+.
T Consensus 235 D~~~r~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~ 314 (430)
T TIGR02446 235 DNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGPS 314 (430)
T ss_pred cCCCCCCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccHH
Confidence 9999999999999999999987 589999999999999999999999999999989988999888776666 35677888
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcC-----------------CCCCCcCCCCChhcccChhhhHHHH
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG-----------------LDPEKINVNGGALAIGHPLGTTGAR 384 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LG-----------------l~~~~vn~~gG~la~Gh~~GatG~~ 384 (445)
.+++++|+++||+++|||+||+||+|+.+.+.++|.|| ++.+|+|++||+|++|||+|+||++
T Consensus 315 ~a~~~al~~Agl~~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~ 394 (430)
T TIGR02446 315 YATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGAR 394 (430)
T ss_pred HHHHHHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHH
Confidence 99999999999999999999999999999999999997 6667999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEEc
Q 013344 385 CVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 422 (445)
Q Consensus 385 ~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~~ 422 (445)
++.++++||+++++ ++|+.++|.|+|++.+++++++
T Consensus 395 ~v~e~~~qL~g~ag--~~g~~~~~~~GG~g~a~iie~~ 430 (430)
T TIGR02446 395 MITQTLRELKRRGG--GLGLNTACAAGGLGAAMILEVE 430 (430)
T ss_pred HHHHHHHHHhhcCC--CccEEEEEecCcceEEEEEEeC
Confidence 99999999999888 8899999999999999999874
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-62 Score=505.34 Aligned_cols=359 Identities=40% Similarity=0.655 Sum_probs=314.4
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
+++|||||++||||+| +.|.+++.++.+|+.+|+++||+++||+++|||.|++|++.+... ..++++.++..+|++.+
T Consensus 2 ~~~v~Ivg~~rTp~g~-~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~~~ 79 (426)
T PRK08170 2 ARPVYIVDGARTPFLK-ARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPD-EANIARVVALRLGCGEK 79 (426)
T ss_pred CCcEEEEecCCCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cChHHHHHHHHhCcCCC
Confidence 3689999999999997 456777889999999999999999999999999999998875443 34778888899999766
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc--cch-h--------h-----------------hh---
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP--KVK-A--------F-----------------EQ--- 171 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~--~~~-~--------~-----------------~~--- 171 (445)
+|.++++++|+|++.++..|+++|++|.++++ + ++. .+. . + ..
T Consensus 80 ~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (426)
T PRK08170 80 VPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLA 159 (426)
T ss_pred ceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccccccc
Confidence 89999999999999999999999999999998 2 111 000 0 0 00
Q ss_pred -------h-hcc--ccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeee
Q 013344 172 -------A-QNC--LLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTI 241 (445)
Q Consensus 172 -------~-~~~--~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v 241 (445)
. .+. ...|++++++|+++||+|||++|.++++||+||.++.+.|+|+ ||+||+. + ++ ..+
T Consensus 160 ~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~-~i~pv~~--~---~~----np~ 229 (426)
T PRK08170 160 PVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLFD--R---DG----KFY 229 (426)
T ss_pred cccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc-eEeeeec--C---CC----Cee
Confidence 0 011 1369999999999999999999999999999999999889998 9999972 1 11 246
Q ss_pred ccCCCCCCCCCHHHHhcCCCccc-CCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccH
Q 013344 242 SVDDGIRPNTSVSELAKLKPVFK-KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGP 320 (445)
Q Consensus 242 ~~d~~~r~~~t~e~l~~~~p~~~-~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~ 320 (445)
..|+++|+++|+|+|.+++|+|+ |.|++|.+|||+++|||+|+||++++.|++++.++.++++++.....+|..++.++
T Consensus 230 a~de~~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~~~~~~~ 309 (426)
T PRK08170 230 DHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQMGLGP 309 (426)
T ss_pred ccCCCCCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCchhhcccH
Confidence 78999999999999999999998 67899999999999999999999999999999999889999988888888888889
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHH---HcCC--------------CCCCcCCCCChhcccChhhhHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRN---KLGL--------------DPEKINVNGGALAIGHPLGTTGA 383 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e---~LGl--------------~~~~vn~~gG~la~Gh~~GatG~ 383 (445)
..+++++|+++||+++|||++|+||+|+.+.+.+++ .||| +.+|+|++||+|++|||+|+||+
T Consensus 310 ~~a~~~al~~aGl~~~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~ 389 (426)
T PRK08170 310 VHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGA 389 (426)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccH
Confidence 999999999999999999999999999999997665 4554 44599999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 384 RCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 384 ~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
+++.+++++|++.++ ++|++++|+|+|++.+++|+|
T Consensus 390 ~~~~~l~~~l~~~~~--~~g~~~~c~~gg~g~a~~~e~ 425 (426)
T PRK08170 390 RIVLHLLHALKRRGT--KRGIAAICIGGGQGGAMLLER 425 (426)
T ss_pred HHHHHHHHHHHhhCC--CeEEEEEecCCChhheEEEEe
Confidence 999999999999887 999999999999999999997
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-62 Score=500.79 Aligned_cols=356 Identities=34% Similarity=0.550 Sum_probs=310.7
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
+|++|||||++||||++ +.|.+++.++.||+.+|++++|+++||++++||.+++|++.+... +.++++.+++..|++.
T Consensus 5 ~m~~V~Ivg~~rTpfg~-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~-~~~~~r~~~l~~gl~~ 82 (427)
T PRK09268 5 TVRRVAILGGNRIPFAR-SNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSR-DFNLTRECVLGSALSP 82 (427)
T ss_pred CCCCEEEEecCcCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCc-cccHHHHHHHHcCCCC
Confidence 67899999999999997 467899999999999999999999999999999999999876443 4578999888888876
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccc-h-h-----------------------h-hhh-
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKV-K-A-----------------------F-EQA- 172 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~-~-~-----------------------~-~~~- 172 (445)
.+|.++|+++|+||+.++..|+++|++|.+|++ .++ +.. . . . .+.
T Consensus 83 ~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (427)
T PRK09268 83 YTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHL 162 (427)
T ss_pred CCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccccccc
Confidence 799999999999999999999999999999998 121 110 0 0 0 000
Q ss_pred -----h--c--cccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeecc
Q 013344 173 -----Q--N--CLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISV 243 (445)
Q Consensus 173 -----~--~--~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~ 243 (445)
. + ...+|+.++++|+++||+|||++|.++++||+||.+++.+|+|++||.|+. .++.
T Consensus 163 ~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~--------------~~~~ 228 (427)
T PRK09268 163 APEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL--------------GLTR 228 (427)
T ss_pred cccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCcc--------------Cccc
Confidence 0 0 123599999999999999999999999999999999999999999999972 1678
Q ss_pred CCCCCCCCCHHHHhcCCCcccC--CCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCC----CCCC
Q 013344 244 DDGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP----AIMG 317 (445)
Q Consensus 244 d~~~r~~~t~e~l~~~~p~~~~--~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p----~~~~ 317 (445)
|+++|+++|+|+|.+++|+|+| +|++|.+|||+++|||+|+||++++.|++++.+|..++..+.....+| ..+.
T Consensus 229 D~~~r~~~t~e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~ 308 (427)
T PRK09268 229 DNNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLL 308 (427)
T ss_pred CCCCCCCCCHHHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchhh
Confidence 9999999999999999999988 799999999999999999999999999999998876665444444443 3466
Q ss_pred ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHH---HHcCCC--------------CCCcCCCCChhcccChhhh
Q 013344 318 VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCR---NKLGLD--------------PEKINVNGGALAIGHPLGT 380 (445)
Q Consensus 318 ~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~---e~LGl~--------------~~~vn~~gG~la~Gh~~Ga 380 (445)
.++..+++++|+++||+++|||++|+||+|+.+.+..+ |.|||+ ..|+|++||+|++|||+|+
T Consensus 309 ~~~~~a~~~a~~~AGl~~~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gA 388 (427)
T PRK09268 309 MAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAA 388 (427)
T ss_pred ccHHHHHHHHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCccc
Confidence 78889999999999999999999999999999966666 877776 3589999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 381 TGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 381 tG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
||.+++.++++||+++++ ++|++++|+|+|++.+++|++
T Consensus 389 TG~~~v~e~~~QL~~~~~--~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 389 TGGRIVATLAKLLAEKGS--GRGLISICAAGGQGVTAILER 427 (427)
T ss_pred chHHHHHHHHHHHHhcCC--CEEEEEEcccCchheEEEEeC
Confidence 999999999999999888 999999999999999999985
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-61 Score=494.32 Aligned_cols=365 Identities=49% Similarity=0.763 Sum_probs=323.2
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|+|+|+++|||+| +.|.+++.++.+|+.+|+++||+++||+++|||.+++|++++... +.++++.+.+.+|++.+
T Consensus 1 M~~v~IvG~~~tp~~r-~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~gl~~~ 78 (393)
T PRK05790 1 MKDVVIVSAARTPIGK-FGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA-GQNPARQAALKAGLPVE 78 (393)
T ss_pred CCceEEEeeecCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCC-CCcHHHHHHHHcCCCCC
Confidence 4689999999999997 457888999999999999999999999999999999999877543 55777778788899756
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--ccc-h--h---------hhh------hhc--cccchh
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PKV-K--A---------FEQ------AQN--CLLPMG 180 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~~-~--~---------~~~------~~~--~~~~mg 180 (445)
+|.++++++|+|++.+|..|+++|++|.++++ + ++ +.. . . ..+ ..+ ....|+
T Consensus 79 ~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 158 (393)
T PRK05790 79 VPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMG 158 (393)
T ss_pred CceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHH
Confidence 89999999999999999999999999999998 1 11 000 0 0 000 001 123589
Q ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCC
Q 013344 181 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 260 (445)
Q Consensus 181 ~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~ 260 (445)
+.+++|+++||+|||++|.+++++|+||.+|+++|+|++||+|+....+ . .+.++++.|+.+|.+++.|.|.+++
T Consensus 159 ~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~---~--~~~~~~~~d~~~~~~~~~e~l~~~~ 233 (393)
T PRK05790 159 ITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQR---K--GDPVVVDTDEHPRPDTTAESLAKLR 233 (393)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCC---C--CCceEecCCCCCCCCCCHHHHhCCC
Confidence 9999999999999999999999999999999999999999999976431 1 1225678999999999999999999
Q ss_pred CcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 013344 261 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 340 (445)
Q Consensus 261 p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~ 340 (445)
|+|+++|++|.+|||+++|||+++||++++.+++++.++++++.+++.....|..++.++..+++++|+++|++++|||+
T Consensus 234 ~v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~ 313 (393)
T PRK05790 234 PAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADLDL 313 (393)
T ss_pred CccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCCccchhHHHHHHHHHHHcCCCHHHCCE
Confidence 99998899999999999999999999999999999999988999998887777777777889999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEE
Q 013344 341 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420 (445)
Q Consensus 341 ~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~ 420 (445)
+|+||+|+.+.+.++|.||+++.++|++||++++|||+|+||++++.++++||+++++ ++|++++|+|+|++.+++||
T Consensus 314 ~e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~~~--~~gl~~~~~~~g~g~~~~~e 391 (393)
T PRK05790 314 IEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRRGA--KKGLATLCIGGGQGVALIVE 391 (393)
T ss_pred EEeCcHHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhcCC--CeEEEEEeccCCceeEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999877 99999999999999999998
Q ss_pred Ec
Q 013344 421 RG 422 (445)
Q Consensus 421 ~~ 422 (445)
+.
T Consensus 392 ~~ 393 (393)
T PRK05790 392 RP 393 (393)
T ss_pred cC
Confidence 73
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-61 Score=481.10 Aligned_cols=348 Identities=37% Similarity=0.589 Sum_probs=312.1
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+|||+|+.||||++ +.|.+++.++.+|+..|++++++ ||+ ++||.|++|++.+.. .++++.+++.+|++.++|
T Consensus 2 ~v~Ivg~~rTpfg~-~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~~---~~~~r~~~~~~Gl~~~~p 74 (361)
T PRK06690 2 RAVIVEAKRTPIGK-KNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGPG---GNVARLSALEAGLGLHIP 74 (361)
T ss_pred cEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCCc---chHHHHHHHHcCCCCCCC
Confidence 69999999999997 56899999999999999999855 896 899999999986553 477888889999987899
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCc--cchh--hhhhhccccchhHhHHHHHHHhCCCHHHHHHH
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNP--KVKA--FEQAQNCLLPMGVTSENVAHRFGVTRKEQDQA 200 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~--~~~~--~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~ 200 (445)
+++|+++|+||+.|+..|+++|++|++|++ .++. .... .........+|++++++|+++||+|||++|.+
T Consensus 75 ~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~ 154 (361)
T PRK06690 75 GVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEY 154 (361)
T ss_pred ceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHH
Confidence 999999999999999999999999999998 2221 1100 00001111249999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHH-hcCCCcccCCCccccCCCCCCCC
Q 013344 201 AVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL-AKLKPVFKKDGTTTAGNSSQVSD 279 (445)
Q Consensus 201 a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l-~~~~p~~~~~G~~t~~~~~~~~D 279 (445)
+..||+|+.+++..++|+.||+|++- ++ |+++|+.+|+|++ .+++|+|+|+|++|.+|||+++|
T Consensus 155 A~~s~k~a~~a~~n~~~~~ei~~v~~--------------~~-d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~D 219 (361)
T PRK06690 155 ACLSYKRTLQALEKGYIHEEILSFNG--------------LL-DESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVND 219 (361)
T ss_pred HHHHHHHHHHHHHCCCCCCceecccC--------------cc-ccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCC
Confidence 99999999999999999999999841 34 8889999999999 77799999889999999999999
Q ss_pred CCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcC
Q 013344 280 GAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG 359 (445)
Q Consensus 280 GAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LG 359 (445)
||+|+||++++.+++++.+++.++++++....+|..++.++..+++++|+++|++++|||+||+||+|+.+.+.+.|.||
T Consensus 220 GAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~~~~~~e~lg 299 (361)
T PRK06690 220 GACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVVACAKELQ 299 (361)
T ss_pred CeEEEEEecHHHHHHcCCCceEEEEEEEEeccCcccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHHHHHHHHhcC
Confidence 99999999999999999999889999888777787788888999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEEc
Q 013344 360 LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 422 (445)
Q Consensus 360 l~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~~ 422 (445)
++++++|++||++++|||+|+||+++++++++||+++++ ++|++++|+|+|++.+++|++.
T Consensus 300 l~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~~--~~g~~~~c~~gG~g~a~~~e~~ 360 (361)
T PRK06690 300 IPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKREDM--KYGIATLGIGGGIGLALLFEKV 360 (361)
T ss_pred CCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhCC--CEEEEEEcccCcceeEEEEEec
Confidence 999999999999999999999999999999999998877 9999999999999999999974
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-59 Score=477.85 Aligned_cols=362 Identities=41% Similarity=0.662 Sum_probs=321.3
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~A-gi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
|++|+|||+++|||+++..|.+++.++.+|+.+|+++||+++ ||+|+|||.+++|+..+...++.++++.++..+|++
T Consensus 1 m~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~- 79 (406)
T PRK07851 1 MPEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD- 79 (406)
T ss_pred CCcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-
Confidence 458999999999999865678899999999999999999997 999999999999987655443556788888999995
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCcc---------------ch---------------hhhh
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNPK---------------VK---------------AFEQ 171 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~~---------------~~---------------~~~~ 171 (445)
.+|.++|+++|+||+.++..|+++|++|.+|++ + ++.. +. .+..
T Consensus 80 ~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (406)
T PRK07851 80 FLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHD 159 (406)
T ss_pred CCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccccccc
Confidence 589999999999999999999999999999999 2 1110 00 0000
Q ss_pred h------hccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCC
Q 013344 172 A------QNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDD 245 (445)
Q Consensus 172 ~------~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~ 245 (445)
. ....++||.++++|+++||++||+++++++++|++|..+.+.+.|..+|+|+.++. + +++.+|+
T Consensus 160 ~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~-----~----~~~~~d~ 230 (406)
T PRK07851 160 PREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPD-----G----TVVSTDD 230 (406)
T ss_pred cccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCC-----C----ceeCCCC
Confidence 0 01134568999999999999999999999999999999999999999999986532 1 3577888
Q ss_pred CCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHH
Q 013344 246 GIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIP 325 (445)
Q Consensus 246 ~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~ 325 (445)
++|+++|+|++.+++|+++|+|.+|.+|||+++|||+|+||++++.|++++.++++++.+++.....|..+..++..+++
T Consensus 231 ~~r~~~t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~ 310 (406)
T PRK07851 231 GPRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASK 310 (406)
T ss_pred CccCCcCHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCCCccchhHHHHHH
Confidence 99999999999999999999899999999999999999999999999999999989999998876677777777889999
Q ss_pred HHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeE
Q 013344 326 AAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 405 (445)
Q Consensus 326 ~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~ 405 (445)
++|+++|++++|||++|+||+|+.+.+..+|.|||+++|+|++||++++|||+|+||++++.++++||+++++ ++|++
T Consensus 311 ~al~~Agi~~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~--~~g~~ 388 (406)
T PRK07851 311 QALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTHDK--TFGLE 388 (406)
T ss_pred HHHHHhCCCHHHCCeehhhhHHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhcCC--CeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998877 99999
Q ss_pred EEeecccceeEEEEEEc
Q 013344 406 SMCIGTGMGAAAVFERG 422 (445)
Q Consensus 406 ~~~~G~G~~~a~~l~~~ 422 (445)
++|+|+|++.+++||+.
T Consensus 389 ~~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 389 TMCVGGGQGMAMVLERL 405 (406)
T ss_pred EEccccChhhEEEEEec
Confidence 99999999999999974
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-58 Score=470.23 Aligned_cols=364 Identities=37% Similarity=0.597 Sum_probs=316.5
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+|+|||++||||+|+ .|.+++.++.+|+.+|+++||+++||++++||.+++|++.+... +.++++.++..+|++.+.|
T Consensus 2 ~v~IvG~~~Tp~g~~-~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~-~~~~~~~~~~~~Gl~~~~p 79 (394)
T PLN02644 2 DVCIVGVARTPIGGF-LGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANL-GQAPARQAALGAGLPPSTI 79 (394)
T ss_pred cEEEEeeccCCccCC-CCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCc-CCcHHHHHHHhcCCCCCCc
Confidence 699999999999974 56788899999999999999999999999999999998765443 4567777888999986799
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccchh---------h--h-hh---h---c--cccchhHh
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKVKA---------F--E-QA---Q---N--CLLPMGVT 182 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~~~---------~--~-~~---~---~--~~~~mg~~ 182 (445)
+++|+++|+||+.++..|+++|++|++|++ .++ +.... + . +. . + ....|++.
T Consensus 80 ~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (394)
T PLN02644 80 CTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVC 159 (394)
T ss_pred eEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHH
Confidence 999999999999999999999999999999 121 10000 0 0 00 0 1 12358889
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCc
Q 013344 183 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 262 (445)
Q Consensus 183 ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 262 (445)
+++|+++||+|||++|.+++++|+|+.+|++.+.|+.||+|+++..+. +. +..++..|+.++ ..+.+.|.+++|+
T Consensus 160 A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~---~~-~~~~~~~de~~~-~~~~~~l~~l~p~ 234 (394)
T PLN02644 160 AELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGR---GR-PSVIVDKDEGLG-KFDPAKLRKLRPS 234 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCC---CC-CceEeecCCCcC-CCCHHHHhCCCCc
Confidence 999999999999999999999999999999999999999999864211 11 124477888886 6889999999999
Q ss_pred ccC-CCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 013344 263 FKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 341 (445)
Q Consensus 263 ~~~-~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~ 341 (445)
|++ +|.+|.+|||+++||++++||++++.+++++.++++++.+++.....|..+...+..+++++|+++|++++|||++
T Consensus 235 f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~Did~~ 314 (394)
T PLN02644 235 FKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDYY 314 (394)
T ss_pred ccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHCCEE
Confidence 987 6999999999999999999999999999999999889999987665555566778889999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 342 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 342 e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
|+||+|+.+.+.++|.||++++++|++||++++|||+|+||++++.++++||+++++ ++|+.++|+|+|++.+++|++
T Consensus 315 Ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~~~--~~g~~~~~~~gg~g~a~~~e~ 392 (394)
T PLN02644 315 EINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSKNG--KYGVAGICNGGGGASAIVVEL 392 (394)
T ss_pred EeCcHHHHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhcCC--CeEEEEEeccCCceeEEEEEe
Confidence 999999999999999999999999999999999999999999999999999998877 899999999999999999998
Q ss_pred cc
Q 013344 422 GD 423 (445)
Q Consensus 422 ~~ 423 (445)
.+
T Consensus 393 ~~ 394 (394)
T PLN02644 393 MQ 394 (394)
T ss_pred cC
Confidence 64
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-58 Score=467.55 Aligned_cols=354 Identities=40% Similarity=0.639 Sum_probs=305.7
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|+|||+++|||+|+ .|.+++.++.+|+.+|+++||+++||+++|||.+++|++.....+..++++.+.+.+|++..
T Consensus 1 M~~v~Ivg~~~Tpf~~~-~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~ 79 (382)
T PRK07801 1 MAEAYIVDAVRTPVGKR-KGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEE 79 (382)
T ss_pred CCceEEEecccCCccCC-CCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCC
Confidence 56899999999999974 56788899999999999999999999999999999998633222224577877778898767
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--cc-----ch---h----hh-----hhhcc--ccchhH
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PK-----VK---A----FE-----QAQNC--LLPMGV 181 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~-----~~---~----~~-----~~~~~--~~~mg~ 181 (445)
+|.++++++|+||+.++..|+++|++|++|++ + ++ +. .. . .. ..+.. ..+|+.
T Consensus 80 ~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 159 (382)
T PRK07801 80 VPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFR 159 (382)
T ss_pred CceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHH
Confidence 89999999999999999999999999999999 1 21 10 00 0 00 01111 234556
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
.+++|+++||++||++|.+++++|+||.+||.+|+|..+++|+.- +..|+++| .+|+|++.+++|
T Consensus 160 ~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~--------------~~~d~~~~-~~t~e~~~~~~~ 224 (382)
T PRK07801 160 GAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGG--------------VTVDEGPR-ETSLEKMAGLKP 224 (382)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccC--------------ccccCCcC-cCCHHHHhcCCC
Confidence 799999999999999999999999999999999999999988741 46788888 699999999999
Q ss_pred cccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 013344 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 341 (445)
Q Consensus 262 ~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~ 341 (445)
+++ .|++|.+|||+++|||+|+||++++.+++++.++.+++.++......|..+..++..+++++|+++||+++|||++
T Consensus 225 i~~-~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agi~~~did~~ 303 (382)
T PRK07801 225 LVE-GGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDVV 303 (382)
T ss_pred CCC-CCCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHhhccChHHHHHHHHHHcCCCHHHcCEe
Confidence 984 3789999999999999999999999999999888889998876655555566777899999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 342 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 342 e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
|+||+|+.+.+.++|.|||+++|+|++||++++|||+|+||++++.++++||++++. ++|++++|.|+|.+++++|++
T Consensus 304 e~~d~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~~~--~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 304 EINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERTGG--RYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred eecccchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEcccccceeEEEEEe
Confidence 999999999999999999999999999999999999999999999999999998876 999999998888888888876
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-58 Score=468.72 Aligned_cols=359 Identities=55% Similarity=0.852 Sum_probs=317.9
Q ss_pred EEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceE
Q 013344 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR 132 (445)
Q Consensus 53 ~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~ 132 (445)
+|+|++||||+|+ .|.+++.++.+|+.+|+++||+++||+++|||.++++++.++.. ++.++..++..+|++.++|++
T Consensus 1 ~Ivg~~~Tpf~r~-~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~-~~~~a~~v~~~lGl~~~~~~~ 78 (386)
T cd00751 1 VIVSAVRTPIGRF-GGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGE-GQNPARQAALLAGLPESVPAT 78 (386)
T ss_pred CEEEeecCCccCC-CCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCCchh
Confidence 5999999999974 46788899999999999999999999999999999998877665 566777788899996458999
Q ss_pred EecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCcc----c--------hh-----h--hhhh-c--cccchhHhHHH
Q 013344 133 TVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPK----V--------KA-----F--EQAQ-N--CLLPMGVTSEN 185 (445)
Q Consensus 133 ~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~----~--------~~-----~--~~~~-~--~~~~mg~~ae~ 185 (445)
+|+.+|+|++.+|..|+++|++|.++++ +..+. . .. + +... + ....|++.+++
T Consensus 79 ~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~ 158 (386)
T cd00751 79 TVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAEN 158 (386)
T ss_pred hhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHH
Confidence 9999999999999999999999999998 11110 0 00 0 0000 1 12347899999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC
Q 013344 186 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 265 (445)
Q Consensus 186 ~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~ 265 (445)
|+++||+|||++|.+++++|+||.+|++.+.+..+|+|+..+.+ .++.++.+|+++|+++|+|++++++|+++|
T Consensus 159 ~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~------~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p 232 (386)
T cd00751 159 VAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGR------KGPVVVDRDEGPRPDTTLEKLAKLKPAFKK 232 (386)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccC------CCCeEeCCCCCCCCCCCHHHHhCCCCCcCC
Confidence 99999999999999999999999999999999999999975431 123578889999999999999999999999
Q ss_pred CCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecC
Q 013344 266 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 345 (445)
Q Consensus 266 ~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~ 345 (445)
+|++|.+|||+++|||+++||++++.+++++.++++++.+++.....|..+..++..+++++|+++||+++|||++|+||
T Consensus 233 ~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d 312 (386)
T cd00751 233 DGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRAGLTLDDIDLIEINE 312 (386)
T ss_pred CCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEeec
Confidence 89999999999999999999999999999999998999999887767766777888999999999999999999999999
Q ss_pred CChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 346 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 346 ~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
+|+...+.++|.||+++.++|++||++++|||+|++|+.+++++++||+++++ ++|++++|.|+|++.+++|++
T Consensus 313 ~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~~~--~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 313 AFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGG--RYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred hhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhcCC--CEEEEEEcccccceEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999877 999999999999999999985
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-57 Score=460.32 Aligned_cols=357 Identities=52% Similarity=0.814 Sum_probs=313.7
Q ss_pred EEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEE
Q 013344 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT 133 (445)
Q Consensus 54 Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~ 133 (445)
|+|+++|||+| +.|++++++..+|+.+|+++||+++||+++|||.+++++++++.. .+.+++.++..+|++.++|+++
T Consensus 1 IvG~~~tp~~~-~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~-~~~~a~~va~~lGl~~~~~~~~ 78 (386)
T TIGR01930 1 IVAAARTPIGK-FGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGE-QQNIARQAALLAGLPESVPAYT 78 (386)
T ss_pred CcceecCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCceeee
Confidence 68999999997 456788999999999999999999999999999999998877664 3567777888999975589999
Q ss_pred ecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCcc----chh-------h--h-----hhh----cc--ccchhHhHH
Q 013344 134 VNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPK----VKA-------F--E-----QAQ----NC--LLPMGVTSE 184 (445)
Q Consensus 134 v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~----~~~-------~--~-----~~~----~~--~~~mg~~ae 184 (445)
++++|+|++.+|..|+++|++|.++++ +..+. ... . . ... +. ...|++.++
T Consensus 79 v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~ 158 (386)
T TIGR01930 79 VNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAE 158 (386)
T ss_pred ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHH
Confidence 999999999999999999999999988 11110 000 0 0 000 00 235889999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCccc
Q 013344 185 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 264 (445)
Q Consensus 185 ~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~ 264 (445)
+|+++||+|||+++.+++++|+||.+|+++|.|++||+|+....+ + +.+++..|+.+|+++|+|++++++|+++
T Consensus 159 ~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~---~---~~~~~~~da~~r~~~t~e~v~~s~~i~~ 232 (386)
T TIGR01930 159 NLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGR---K---GPVTVSTDEGIRPNTTLEKLAKLKPAFD 232 (386)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccC---C---CCeEeCCCCCCCCCCCHHHHhCCCCCcC
Confidence 999999999999999999999999999999999999999855321 1 2367888999999999999999999999
Q ss_pred CCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 013344 265 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 344 (445)
Q Consensus 265 ~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h 344 (445)
|.|.+|.+|||+++|||+++||++++.|++++.+|.+++.+++.....|..+..++..+++++|+++|++++|||++++|
T Consensus 233 P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~ 312 (386)
T TIGR01930 233 PNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLFEIN 312 (386)
T ss_pred CCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccccHHHHHHHHHHHcCCCHHHCCeeehc
Confidence 88889999999999999999999999999999999899999988776676667777899999999999999999999999
Q ss_pred CCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEE
Q 013344 345 EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420 (445)
Q Consensus 345 ~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~ 420 (445)
|+|+...+..+|.||+...++|++||++++|||+|++|+.++.++++||++++. ++|+++.|.++|++.+++||
T Consensus 313 d~fa~~~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~--~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 313 EAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRRGG--RYGLATICIGGGQGIAVILE 386 (386)
T ss_pred chhHHHHHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEeccCCceEEEEeC
Confidence 999999999999999988899999999999999999999999999999998866 99999999988999888875
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-52 Score=426.07 Aligned_cols=359 Identities=41% Similarity=0.598 Sum_probs=316.3
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHc--CCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT--NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~A--gi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~ 126 (445)
|++|+|+|++||||+++..|++++..+++|.....+..+++. +|++.+||.+++|++.+.+.++.++++.+++.+|++
T Consensus 1 ~~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~ 80 (392)
T COG0183 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLP 80 (392)
T ss_pred CceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCC
Confidence 478999999999999864578889999999888888888654 688889999999999888655779999999999998
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCccch------------h-hhhh----hccccchhHhH
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNPKVK------------A-FEQA----QNCLLPMGVTS 183 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~~~~------------~-~~~~----~~~~~~mg~~a 183 (445)
.++|.++|+++|+||+.|+..|++.|++|.+|++ .++.... + +... ......||+++
T Consensus 81 ~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~~A 160 (392)
T COG0183 81 GSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTA 160 (392)
T ss_pred CCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCccccchhhhhhhhhhccccccccccchhHHHHHH
Confidence 7799999999999999999999999999999999 2221110 0 0000 11124699999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCC--CCHHHHhcCCC
Q 013344 184 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPN--TSVSELAKLKP 261 (445)
Q Consensus 184 e~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~--~t~e~l~~~~p 261 (445)
++|+++||+|||+||.|+++||+||.+||++++| +||+|+++.. ..+..|+.+|.+ .+.|.+..++|
T Consensus 161 ~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~-~eI~~~~v~~----------~~~~~dp~~r~d~~~~~dg~a~l~~ 229 (392)
T COG0183 161 ERYAKRYGISREDQDEVAVKSHKNAAANPKAGFF-DEITPEDVLN----------SPVVADPLRRLDCSPTSDGAAALVP 229 (392)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCC-CceeeEEecC----------CceecCCcccCCCCCChhhhcCcee
Confidence 9999999999999999999999999999999999 9999997743 146678888888 89999999999
Q ss_pred cccCC-CccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCC-CCCcc
Q 013344 262 VFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQ-LDDID 339 (445)
Q Consensus 262 ~~~~~-G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~-~~DID 339 (445)
+|.+. |.+|.+|+++++||++++++++.+.++++++.+++++.++...+++|..| ..+..+++++|+.++|. .+|||
T Consensus 230 a~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~-~~~v~av~~~~~~~~l~~~edlg 308 (392)
T COG0183 230 AFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDLG 308 (392)
T ss_pred ccccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccc-cCCHHHHHHHHHHcCCchhhhcC
Confidence 99875 78999999999999999999999999999999999999999999999988 88999999999999999 99999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCC--CceeeEEEeeccc-ceeE
Q 013344 340 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRD--CRFGVISMCIGTG-MGAA 416 (445)
Q Consensus 340 ~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~--~~~G~~~~~~G~G-~~~a 416 (445)
++|.+++|..+...+.+.+|+ +|+|++||++++|||+|+||++++.++++||++++.. .++|+.++|.|+| ++.+
T Consensus 309 l~e~nEafa~~~~~~~~~~G~--~~VN~~GGaiA~GHPiGAtG~~~~~~l~~ql~~~~~~~~~~~g~~t~~~Ggg~~g~a 386 (392)
T COG0183 309 LAEKGEAFAAVALGVTKILGD--LPVNPSGGAIALGHPIGATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQGVA 386 (392)
T ss_pred ceecChHHHHHHHhhHHhcCC--ceeCCCcchhhcCCCccchHHHHHHHHHHHHhhccccccccceeeEEEecCcceeEE
Confidence 999999999999999999999 8999999999999999999999999999999984331 2578899999998 8888
Q ss_pred EEEEE
Q 013344 417 AVFER 421 (445)
Q Consensus 417 ~~l~~ 421 (445)
++|++
T Consensus 387 ~vl~~ 391 (392)
T COG0183 387 AVLER 391 (392)
T ss_pred EEEec
Confidence 88876
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-50 Score=408.78 Aligned_cols=332 Identities=20% Similarity=0.221 Sum_probs=272.9
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|+|||+++|||+|+ +.+..+|+.+|+++||+++||++++||.|+++++.++....+..+..++..+|++ .
T Consensus 3 ~~~v~Ivg~~~t~~~r~------~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~ 75 (399)
T PRK06059 3 PEPVYILGAGMHPWGKW------GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-G 75 (399)
T ss_pred CCcEEEEEecccccCCC------CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-C
Confidence 46799999999999963 3567999999999999999999999999999887765432334567788899995 5
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCccc-hh-------hhhhh----cc---ccchhHhHHHHH
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNPKV-KA-------FEQAQ----NC---LLPMGVTSENVA 187 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~~~-~~-------~~~~~----~~---~~~mg~~ae~~a 187 (445)
++.++++.+|+|++.+|..|+++|++|.++++ + ++... .. ..+.. .. ...|++.+++|+
T Consensus 76 ~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~ 155 (399)
T PRK06059 76 APVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRM 155 (399)
T ss_pred CceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHH
Confidence 78999999999999999999999999999998 1 11100 00 00000 11 124889999999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCC
Q 013344 188 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 267 (445)
Q Consensus 188 ~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G 267 (445)
++||++||++..+++++|++|..||++ .+|+++|+|++++++|+++|
T Consensus 156 ~~yg~s~e~~a~v~~~~~~~a~~Np~A-------------------------------~~r~~~t~e~v~~s~~i~~P-- 202 (399)
T PRK06059 156 DLYGATVEDFAQVKVKNARHGLLNPNA-------------------------------RYRKEVTVEDVLASPVVSDP-- 202 (399)
T ss_pred HHhCCCHHHHHHHHHHHHHHHccCcHh-------------------------------hcCCCCCHHHHhcCCcccCC--
Confidence 999999999999999999999888766 24557999999999999876
Q ss_pred ccccCCCCCCCCCCeeEEeeCHHHHHhc--CCCeeEEEEEeEEee-cCC----CCCCcc--------------HHHHHHH
Q 013344 268 TTTAGNSSQVSDGAGAVLLMKRSVAMRK--GLPILGVFRTFAAVG-VDP----AIMGVG--------------PAVAIPA 326 (445)
Q Consensus 268 ~~t~~~~~~~~DGAaAvvL~s~~~a~~~--g~~~~~~i~~~~~~~-~~p----~~~~~~--------------~~~ai~~ 326 (445)
++..|||+++|||+|+||++++.|+++ +.++..++.+++... ..+ ...... ...++++
T Consensus 203 -l~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~ 281 (399)
T PRK06059 203 -LRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDA 281 (399)
T ss_pred -CchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHH
Confidence 889999999999999999999999998 666667888777643 111 111111 1367999
Q ss_pred HHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHH
Q 013344 327 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVAT 388 (445)
Q Consensus 327 aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~ 388 (445)
+|+++||+++|||++|+||+|+.+.+.++|.|||+++ |+|++||++++|||+|+||++++.+
T Consensus 282 a~~~agl~~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e 361 (399)
T PRK06059 282 AYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCE 361 (399)
T ss_pred HHHHcCCCHHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHH
Confidence 9999999999999999999999999999999999975 9999999999999999999999999
Q ss_pred HHHHHHhcCC-----CCceeeEEEeecccceeEEEEEE
Q 013344 389 LLHEMKRRGR-----DCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 389 ~l~~L~~~~~-----~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
+++||+++.+ .+++|++++|.++|.+.+++|+|
T Consensus 362 ~~~qLrg~ag~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 362 LTWQLRGQAGGRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred HHHHhccCcCCccCCCccEEEEeccCCcccceEEEecC
Confidence 9999998743 24788888887778888888875
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-49 Score=404.29 Aligned_cols=308 Identities=19% Similarity=0.282 Sum_probs=258.2
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~ 129 (445)
++|+|||.+.|||+|+ ++.++.+|+.+|+++||+++||+++|||.+++|+..+... ..++++.++..+|++ ..
T Consensus 1 ~~v~IvG~g~t~~~~~-----~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~-~~ 73 (385)
T PRK12578 1 RRVAVIGVGNSKFGRR-----DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGI-ELYPAPIVAEYSGLT-GK 73 (385)
T ss_pred CceEEEeecccceeec-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccc-cCChHHHHHHHhCCC-CC
Confidence 4699999999999975 4788999999999999999999999999999999876442 346788888899997 46
Q ss_pred ceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCccc--h---h---------hhhhhc-c--ccchhHhHHHHH
Q 013344 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPKV--K---A---------FEQAQN-C--LLPMGVTSENVA 187 (445)
Q Consensus 130 ~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~~--~---~---------~~~~~~-~--~~~mg~~ae~~a 187 (445)
+.++++++|+|++.+|..|+++|++|.++++ +..+.. . . +...+. . ...+++.+++|+
T Consensus 74 ~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m 153 (385)
T PRK12578 74 VPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHM 153 (385)
T ss_pred CeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHH
Confidence 7799999999999999999999999999998 111111 0 0 000000 0 112456789999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCC
Q 013344 188 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 267 (445)
Q Consensus 188 ~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G 267 (445)
++||+|||+++.+++++|++|.+||++ +|+ ++++.|++++++++++|
T Consensus 154 ~~~g~t~e~~a~va~~~~~~A~~np~a-~~~------------------------------~~i~~e~v~~s~~i~~P-- 200 (385)
T PRK12578 154 AVYGTTEEQMALVSVKAHKYGAMNPKA-HFQ------------------------------KPVTVEEVLKSRAISWP-- 200 (385)
T ss_pred HHhCcCHHHHHHHHHHHHHHHhcCChh-hcC------------------------------CCCCHHHHhcCCccCCC--
Confidence 999999999999999999999999965 443 34678888888887755
Q ss_pred ccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEee------cCCCCCCc-cHHHHHHHHHHHcCCCCCCccE
Q 013344 268 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG------VDPAIMGV-GPAVAIPAAVKSAGLQLDDIDL 340 (445)
Q Consensus 268 ~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~------~~p~~~~~-~~~~ai~~aL~~aGl~~~DID~ 340 (445)
+|.+|||+++|||+|+||++++.|++++.++..++.+++... .+|+.+.. ++..+++++|+++|++++|||+
T Consensus 201 -l~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~ 279 (385)
T PRK12578 201 -IKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEV 279 (385)
T ss_pred -ccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCE
Confidence 899999999999999999999999999876667888887642 22344443 4568999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCC
Q 013344 341 FEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR 398 (445)
Q Consensus 341 ~e~h~~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~ 398 (445)
+|+||+|+.+++..+|.|||+++ |+|++||+|++|||+|+||++++.++++||+++.+
T Consensus 280 ~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~ag 355 (385)
T PRK12578 280 ATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEAG 355 (385)
T ss_pred EEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCcc
Confidence 99999999999999999999984 89999999999999999999999999999998755
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-49 Score=404.93 Aligned_cols=305 Identities=24% Similarity=0.345 Sum_probs=258.5
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+|+|+|+++|||+|+ + ++.+..+|+.+|+++||+++||++++||.+++|+..++.. ........+|+. .+|
T Consensus 2 ~v~IvG~~~t~~~~~--~--~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~----~~~~~~~~lGl~-~~~ 72 (391)
T PRK08256 2 KVFVAGVGMTPFEKP--G--ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST----SGQRALYEVGMT-GIP 72 (391)
T ss_pred cEEEEeccccccccC--C--CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc----hhHHHHHHcCCC-CCC
Confidence 599999999999953 2 4678899999999999999999999999999998876543 122345688995 578
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCcc-c----------h-hhh--h----hhc-c---ccchhHh
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNPK-V----------K-AFE--Q----AQN-C---LLPMGVT 182 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~~-~----------~-~~~--~----~~~-~---~~~mg~~ 182 (445)
.++++++|+||+.+|..|+++|++|++|++ .++.. + . .+. . ..+ . ...|++.
T Consensus 73 ~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 152 (391)
T PRK08256 73 IVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGA 152 (391)
T ss_pred CcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHH
Confidence 899999999999999999999999999998 12110 0 0 000 0 001 1 1248889
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCc
Q 013344 183 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 262 (445)
Q Consensus 183 ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 262 (445)
+++|+++||++||+++.+++++|+||.+||++ +| |.++|+|++++++|+
T Consensus 153 a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A-~~------------------------------~~~~t~e~~~~s~~i 201 (391)
T PRK08256 153 GREHMEKYGTTAETFAKIGVKARRHAANNPYA-QF------------------------------RDEYTLEDVLASPMI 201 (391)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhhhcCChh-hc------------------------------CCCCCHHHHhcCCcc
Confidence 99999999999999999999999999999976 22 336899999999999
Q ss_pred ccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCc----------cHHHHHHHHHHHcC
Q 013344 263 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV----------GPAVAIPAAVKSAG 332 (445)
Q Consensus 263 ~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~----------~~~~ai~~aL~~aG 332 (445)
++| +|.+|||+++|||+|+||++++.++++++++.+++.+++....+|..+.. .+..+++++|+++|
T Consensus 202 ~~P---l~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag 278 (391)
T PRK08256 202 WGP---LTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAG 278 (391)
T ss_pred cCC---CcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcC
Confidence 976 99999999999999999999999999987777889988876655544332 24679999999999
Q ss_pred CCCCCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 333 LQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 333 l~~~DID~~e~h~~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
++++|||++|+||+|+.+.+.++|.|||+++ |+|++||.|++|||+|+||++++.++++||+
T Consensus 279 ~~~~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~ 358 (391)
T PRK08256 279 IGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLR 358 (391)
T ss_pred CCHHHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred hcCC
Q 013344 395 RRGR 398 (445)
Q Consensus 395 ~~~~ 398 (445)
++++
T Consensus 359 g~ag 362 (391)
T PRK08256 359 GTAG 362 (391)
T ss_pred CCcC
Confidence 8865
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-49 Score=403.21 Aligned_cols=353 Identities=33% Similarity=0.468 Sum_probs=282.5
Q ss_pred EEeeeeccccCCC--CCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHH-HHcCCCCCCce
Q 013344 55 VAAYRTALCKSKR--GGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA-FYAGFPETVPV 131 (445)
Q Consensus 55 vg~~rT~~~~~~~--G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~-~~lGl~~~~~~ 131 (445)
+|++||||+|+.. |.+....+.+|+.+|+++||++++|+|++||.|++|++.+++. +.++++... ..+|+ .++|+
T Consensus 1 ~g~~~Tpfg~~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~-g~~~~~~~~~~~lg~-~~~p~ 78 (393)
T cd00826 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGE-GQNCAQQAAMHAGGL-QEAPA 78 (393)
T ss_pred CccccCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcc-cCcHHHHHHHHcCCC-CCCcE
Confidence 4789999998432 6778889999999999999999999999999999999988764 556777544 45666 47899
Q ss_pred EEecCcCcHHHHHHHHHHHHHHcCCCCeEec-C-ccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 013344 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIGSV-N-PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAA 209 (445)
Q Consensus 132 ~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~-~-~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~ 209 (445)
++|+++|+||+.++..|+++|++|.++++.. . ..+...+. .....+. ...++.+|+ +|+++|.++..++.++.
T Consensus 79 ~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~--~~~~~~~--~~~~~~~~~-~r~~~~~~a~~s~~~~~ 153 (393)
T cd00826 79 IGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAE--NNAKEKH--IDVLINKYG-MRACPDAFALAGQAGAE 153 (393)
T ss_pred EEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcc--cccccch--hHHHHHHhC-ChhhccHHHHHHHHHHH
Confidence 9999999999999999999999999999811 0 00000000 0000111 123566789 99999999999999999
Q ss_pred HHHHcCCcccccccceecccCCCCCCCCCeeeccCC--CCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEee
Q 013344 210 AATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDD--GIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLM 287 (445)
Q Consensus 210 ~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~--~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~ 287 (445)
...+.|.++++|.||.++..+ |. .....|+ ..++++|+|++.+++|+|.+++++|.+|||+++|||+|+||+
T Consensus 154 ~~~~~G~~~e~~a~v~~~~~~---~~---~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~ 227 (393)
T cd00826 154 AAEKDGRFKDEFAKFGVKGRK---GD---IHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILM 227 (393)
T ss_pred HHHHcCCCHHHEEEEEEecCC---CC---EEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEe
Confidence 999999999999999765310 10 1122233 344679999999999999666789999999999999999999
Q ss_pred CHHHHHhcCC-------CeeEEEEEeEEeecCCC----CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHH
Q 013344 288 KRSVAMRKGL-------PILGVFRTFAAVGVDPA----IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRN 356 (445)
Q Consensus 288 s~~~a~~~g~-------~~~~~i~~~~~~~~~p~----~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e 356 (445)
+++.++++++ .+.+++.++......|. .+..++..+++++|+++||+++|||+||+||+|+.+.+.++|
T Consensus 228 S~~~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~~~l~~~e 307 (393)
T cd00826 228 SEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAANACATNE 307 (393)
T ss_pred cHHHHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHHHHHHHHH
Confidence 9999999886 23444444444444555 567788899999999999999999999999999999999999
Q ss_pred HcCCCC------------------CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCC---CceeeEEEeeccccee
Q 013344 357 KLGLDP------------------EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRD---CRFGVISMCIGTGMGA 415 (445)
Q Consensus 357 ~LGl~~------------------~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~---~~~G~~~~~~G~G~~~ 415 (445)
.|||++ .|+|++||+|++|||+|+||++++.++++||+++.+. .+.++.++|.++|.+.
T Consensus 308 ~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g~ag~~q~~~~~~~~~~~~Gg~g~ 387 (393)
T cd00826 308 ALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEAGKRQGAGAGLALLCIGGGGGA 387 (393)
T ss_pred HhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhhhhccccCCCcCEEEEEcCCCcee
Confidence 999998 6999999999999999999999999999999987542 1457788887778788
Q ss_pred EEEEE
Q 013344 416 AAVFE 420 (445)
Q Consensus 416 a~~l~ 420 (445)
+++++
T Consensus 388 a~~~~ 392 (393)
T cd00826 388 AMCIE 392 (393)
T ss_pred EEEEe
Confidence 88776
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-49 Score=403.28 Aligned_cols=317 Identities=19% Similarity=0.298 Sum_probs=259.8
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~ 129 (445)
++|+|||+++|||+|+ ++.++.+|+.+++++||+++||+++|||.+++|++..+..++ ..+..++..+|++ ..
T Consensus 7 ~~v~IvG~g~tp~~~~-----~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~-~~~~~~a~~lGl~-~~ 79 (398)
T PRK06157 7 DKVAILGMGCTKFGER-----WDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSG-KSGTPLSRALRLP-NI 79 (398)
T ss_pred CCeEEEEecccccccc-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccc-chhHHHHHHcCCC-CC
Confidence 5799999999999974 467889999999999999999999999999999876432211 2234466689997 48
Q ss_pred ceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCc--c--chh---h--hhhh-c---cccchhHhHHHHHHHh
Q 013344 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNP--K--VKA---F--EQAQ-N---CLLPMGVTSENVAHRF 190 (445)
Q Consensus 130 ~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~--~--~~~---~--~~~~-~---~~~~mg~~ae~~a~~~ 190 (445)
|.++|+++|+||+.+|.+|++.|++|.+|++ .++. . ... . .+.. . ....+++.+++|+++|
T Consensus 80 ~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~y 159 (398)
T PRK06157 80 PVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKY 159 (398)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 1211 0 000 0 0000 0 1124788999999999
Q ss_pred CCCHHHH----HHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCC
Q 013344 191 GVTRKEQ----DQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 266 (445)
Q Consensus 191 gisre~~----d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~ 266 (445)
|+|||++ +.+++++|++|.+||.+. +|+++|+|++++++|+++|
T Consensus 160 G~t~e~~~~~~a~vav~~~~~A~~np~A~-------------------------------~r~~~t~e~v~~s~~v~~P- 207 (398)
T PRK06157 160 GVSREDLKRAMAHVSVKSHANGARNPKAH-------------------------------LRKAVTEEQVLKAPMIAGP- 207 (398)
T ss_pred CCCHHHHcccccHHHHHHHHHHhcCChhh-------------------------------cCCCCCHHHHhcCCcccCC-
Confidence 9999999 699999999999988762 3456899999999999876
Q ss_pred CccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeec----------CCCCCCccHHHHHHHHHHHcCCC--
Q 013344 267 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV----------DPAIMGVGPAVAIPAAVKSAGLQ-- 334 (445)
Q Consensus 267 G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~----------~p~~~~~~~~~ai~~aL~~aGl~-- 334 (445)
++..|||+++|||+|+||++++.|++++.++..++.+++.... +|..++ .+..+++++|+++||+
T Consensus 208 --l~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~-~~~~aa~~a~~~AGl~~~ 284 (398)
T PRK06157 208 --LGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFP-TTRIAARKAYREAGITDP 284 (398)
T ss_pred --CchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccH-HHHHHHHHHHHHcCCCCc
Confidence 7888999999999999999999999998755568888765421 222232 2567999999999998
Q ss_pred CCCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 335 LDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 335 ~~DID~~e~h~~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
++|||++|+||+|+.+.+.++|.|||+++ |+|++||+|++|||+|+||++++.++++||+++
T Consensus 285 ~~Did~~Ei~D~Fs~~~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 364 (398)
T PRK06157 285 REELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGR 364 (398)
T ss_pred hhcCCEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhccc
Confidence 79999999999999999999999999984 899999999999999999999999999999987
Q ss_pred CCC-----CceeeEEEe
Q 013344 397 GRD-----CRFGVISMC 408 (445)
Q Consensus 397 ~~~-----~~~G~~~~~ 408 (445)
.+. ++.|+++..
T Consensus 365 ag~rQv~~a~~~l~~~~ 381 (398)
T PRK06157 365 AGERQLKNPRLALTHNL 381 (398)
T ss_pred ccCccCCCccEEEEecc
Confidence 553 355666543
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=402.11 Aligned_cols=331 Identities=20% Similarity=0.198 Sum_probs=261.2
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHH-HHHHcCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRM-AAFYAGFPE 127 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~-~~~~lGl~~ 127 (445)
|++|+|||+++|||+|+ .++.+..+|+.+|+++||+++||+++|||.+++++...... +.++++. ++..+|++.
T Consensus 15 m~~VaIvG~g~Tpfgr~----~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~-g~~~~~~~~~~~lGl~~ 89 (430)
T PRK06365 15 SRDVYMVAAGVTKFDKA----SPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQ-RQLLAGIMVQDYLGLVP 89 (430)
T ss_pred ccCEEEEEeeecCcccc----CCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeccccccc-ccchhhHHHHHhcCCCC
Confidence 46899999999999974 24577899999999999999999999999998877554332 4455554 467999974
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCcc--chh-----h-hh----hh-c--cccchhHhHHHH
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNPK--VKA-----F-EQ----AQ-N--CLLPMGVTSENV 186 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~~--~~~-----~-~~----~~-~--~~~~mg~~ae~~ 186 (445)
.|+++++++|+|+..+|..|++.|++|.+++| .++.. ... . .+ .. . ....|++.+++|
T Consensus 90 -~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ry 168 (430)
T PRK06365 90 -KPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAVRH 168 (430)
T ss_pred -CceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999 12110 000 0 00 00 0 011378899999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCC
Q 013344 187 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 266 (445)
Q Consensus 187 a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~ 266 (445)
+++||+|||+++.+++++|+||.+||.+.+ +.++|+|++.+++++++|
T Consensus 169 ~~~yG~t~e~la~vav~~~~~A~~NP~A~~-------------------------------~~~~t~e~v~~s~~i~~P- 216 (430)
T PRK06365 169 MYEFGTTVEQLAKVSVKNHGNAIHNPFAQS-------------------------------PMKITVEDVRKSPMVSYP- 216 (430)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHhhCcHhhc-------------------------------CCCCCHHHHhcCCccccC-
Confidence 999999999999999999999999998732 335899999999887754
Q ss_pred CccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeE-EEEEeEEeecCCCCCCc--------------------------c
Q 013344 267 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILG-VFRTFAAVGVDPAIMGV--------------------------G 319 (445)
Q Consensus 267 G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~-~i~~~~~~~~~p~~~~~--------------------------~ 319 (445)
+|.+|||+++|||+|+||++++.|++++.+++. +..++.....++..+.. .
T Consensus 217 --lt~~d~~~~sDGAaAvvl~See~A~~l~~~pv~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (430)
T PRK06365 217 --LTRLDVCAMSDGAACAILASEDKAFEITDKPVLIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRA 294 (430)
T ss_pred --cchhhcCCcCCceEEEEEecHHHHHhcCCCCeEEEEEEEeccccccccccccccccccccccccccccccccccccHH
Confidence 999999999999999999999999999887753 13344333333222111 1
Q ss_pred HHHHHHHHHHHcCCC--CCCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhh
Q 013344 320 PAVAIPAAVKSAGLQ--LDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLG 379 (445)
Q Consensus 320 ~~~ai~~aL~~aGl~--~~DID~~e~h~~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~G 379 (445)
...+++++|+++||+ ++|||++|+||+|+.+.+.++|.|||+++ |+|++||+|++|||+|
T Consensus 295 ~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~G 374 (430)
T PRK06365 295 GRMAAKEAYEMAGITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVG 374 (430)
T ss_pred HHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCccc
Confidence 237999999999998 89999999999999999999999999983 9999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCC-----------CCceeeEEEeecccceeEEEE
Q 013344 380 TTGARCVATLLHEMKRRGR-----------DCRFGVISMCIGTGMGAAAVF 419 (445)
Q Consensus 380 atG~~~i~~~l~~L~~~~~-----------~~~~G~~~~~~G~G~~~a~~l 419 (445)
+||.+++.++++||+++.+ .++.|+++...|.|....+++
T Consensus 375 atG~~~~~e~~~QLrG~a~~~~~~~~rQv~~a~~~l~~~~gg~~~~~~~~v 425 (430)
T PRK06365 375 ATGIMQAVFMFWQLQGRIKKHFHDDYLQVKNAKRGLIHSHAGTGTYVTVTI 425 (430)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCcccccCCCccEEEEecCCcccceEEEEE
Confidence 9999999999999997653 135666665434443333333
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-49 Score=402.19 Aligned_cols=337 Identities=20% Similarity=0.267 Sum_probs=260.8
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCccc--chHHHHHHHHcCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR--ASECRMAAFYAGFPE 127 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~--~~~a~~~~~~lGl~~ 127 (445)
++|+|||+++|||+|+ +..++.++.+|+.+|+++||+++||+|+|||.+++|+.+++...+ ..+........++.
T Consensus 3 ~~v~Ivg~~~t~~~r~--~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (403)
T PRK06289 3 DDVWVLGGYQSDFARN--WTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALW- 79 (403)
T ss_pred CcEEEEeCCcCccccc--cCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcCC-
Confidence 4799999999999974 355688999999999999999999999999999999876653311 11122222344552
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCcc--c--h----h--hhhhh-----cc-ccchhHhHHH
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNPK--V--K----A--FEQAQ-----NC-LLPMGVTSEN 185 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~~--~--~----~--~~~~~-----~~-~~~mg~~ae~ 185 (445)
..|+++++++|+||+.+|..|+.+|++|+++++ + ++.. . . . +.+.. .. ...|++.+++
T Consensus 80 g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~ 159 (403)
T PRK06289 80 GVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADE 159 (403)
T ss_pred CCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHH
Confidence 468999999999999999999999999999998 1 2111 0 0 0 11000 00 1127899999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC
Q 013344 186 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 265 (445)
Q Consensus 186 ~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~ 265 (445)
|+++||++||+++.+++++|++|.+||+|. |+.++. .++++.+++..++++.
T Consensus 160 y~~~yG~t~e~la~va~~~~~~A~~NP~A~-~~~~~~-------------------------~~~~~~~d~~~s~~i~-- 211 (403)
T PRK06289 160 YDRRYGLDEEHLRAIAEINFANARRNPNAQ-TRGWAF-------------------------PDEATNDDDATNPVVE-- 211 (403)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHccCcHhh-cCcccc-------------------------ccccchhhhhcCCccc--
Confidence 999999999999999999999999999983 333221 0136666776665543
Q ss_pred CCccccCCCCCCCCCCeeEEeeCHHHHHhcCC-CeeEEEEEeEEeecC-------------CCCCCccHHHHHHHHHHHc
Q 013344 266 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL-PILGVFRTFAAVGVD-------------PAIMGVGPAVAIPAAVKSA 331 (445)
Q Consensus 266 ~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~-~~~~~i~~~~~~~~~-------------p~~~~~~~~~ai~~aL~~a 331 (445)
+++|.+|||+++|||+|+||++++.+++++. ++..++++++..... |..+.. +..+++++|+++
T Consensus 212 -~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~aa~~a~~~A 289 (403)
T PRK06289 212 -GRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPH-VRQAVLDAYRRA 289 (403)
T ss_pred -CCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEeccccccccccccccccccccHH-HHHHHHHHHHHc
Confidence 5699999999999999999999999999876 566788888765221 122222 467999999999
Q ss_pred CCCCCCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHHHHHHH
Q 013344 332 GLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEM 393 (445)
Q Consensus 332 Gl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L 393 (445)
||+++|||++|+||+|+.+.+.++|.||||++ |+|++||+|++|||+|+||.+++.++++||
T Consensus 290 gi~~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QL 369 (403)
T PRK06289 290 GVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQV 369 (403)
T ss_pred CCCHHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999984 899999999999999999999999999999
Q ss_pred HhcCCCC----ceeeEEEeecccceeEEEE
Q 013344 394 KRRGRDC----RFGVISMCIGTGMGAAAVF 419 (445)
Q Consensus 394 ~~~~~~~----~~G~~~~~~G~G~~~a~~l 419 (445)
+++++.. ..+..+.|.|++++.+.++
T Consensus 370 rg~ag~~Qv~~~~~~l~~~~gg~~~~~~~~ 399 (403)
T PRK06289 370 TGTAGDYQVEGAKTFGTLNIGGSTTTTVSF 399 (403)
T ss_pred hccccCccCCchheEEEEecCcccceEEEE
Confidence 9876421 2234445566665554443
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-48 Score=399.00 Aligned_cols=339 Identities=22% Similarity=0.288 Sum_probs=263.2
Q ss_pred CCcEEEEEeeeecc-ccC---C-------CCCCCCCCHHHHHHHHHHHHHHHcCCCCCC--CCcEEEEeccCCCc-ccch
Q 013344 49 GDDVVIVAAYRTAL-CKS---K-------RGGFKDTYPDDLLAPVLKAVIEKTNVDPSE--VGDIVVGTVLAPGS-QRAS 114 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~-~~~---~-------~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~d--Id~vi~g~~~~~~~-~~~~ 114 (445)
|++|||||+.|||| +|+ + +|.+++.++.||+.+|+++||+++||+++| ||.+++|++.+... .+.+
T Consensus 11 ~~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~ 90 (438)
T PTZ00455 11 AKRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGH 90 (438)
T ss_pred cCceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccc
Confidence 46899999999999 873 2 577788999999999999999999999999 99999999865542 1357
Q ss_pred HHHHHHHHcCCC------CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCccc-h---h-------hh-
Q 013344 115 ECRMAAFYAGFP------ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNPKV-K---A-------FE- 170 (445)
Q Consensus 115 ~a~~~~~~lGl~------~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~~~-~---~-------~~- 170 (445)
+++.+++.+|++ ..+|+++|+++|+||+.|+..|+++|++|.+|++ .++... . . +.
T Consensus 91 ~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~ 170 (438)
T PTZ00455 91 LGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRR 170 (438)
T ss_pred hHHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccc
Confidence 788888777776 5799999999999999999999999999999999 121100 0 0 00
Q ss_pred h-h-hccccc--hhHhHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCC
Q 013344 171 Q-A-QNCLLP--MGVTSENVAHRFG-VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDD 245 (445)
Q Consensus 171 ~-~-~~~~~~--mg~~ae~~a~~~g-isre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~ 245 (445)
. . .+..++ ++..+ +|+++|+ +|||++|.+++++|.++..||.+.+++..+ + +....|+
T Consensus 171 ~~~~~~~~~~~~~a~~~-~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~---t-------------~~~~~d~ 233 (438)
T PTZ00455 171 QRKLDDFTFPCLFAKRM-KYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKL---S-------------LEFCTGA 233 (438)
T ss_pred cccccCcchHHHHHHHH-HHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCC---C-------------ceeeccc
Confidence 0 0 011111 23333 7888886 999999999999999999999884322211 0 1122344
Q ss_pred CCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCe----eEEEEEeEEeec----CC---C
Q 013344 246 GIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPI----LGVFRTFAAVGV----DP---A 314 (445)
Q Consensus 246 ~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~----~~~i~~~~~~~~----~p---~ 314 (445)
.+| +.|.| +++.+.. +++.+|||+++|||+|+||++++.+++++++| ..++++++..+. +| .
T Consensus 234 ~~~---~~e~l-~s~~i~~---pl~~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~ 306 (438)
T PTZ00455 234 SDK---NPKFL-GNETYKP---FLRMTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDAT 306 (438)
T ss_pred ccc---chhhh-cCCcccC---cCchhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccc
Confidence 444 44444 2233332 37899999999999999999999999999887 578888887654 33 3
Q ss_pred CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCC------------------CCcCCCCChhcccC
Q 013344 315 IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP------------------EKINVNGGALAIGH 376 (445)
Q Consensus 315 ~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~------------------~~vn~~gG~la~Gh 376 (445)
.++.. ..+++++|+++|++++|||++|+||+|+.+.+.++|.|||++ .|+|++||++++||
T Consensus 307 ~~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GH 385 (438)
T PTZ00455 307 RMFTS-RAAAQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGH 385 (438)
T ss_pred cchHH-HHHHHHHHHHcCCCHHHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCC
Confidence 34443 689999999999999999999999999999999999999998 59999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCC------CceeeEEEeeccc
Q 013344 377 PLGTTGARCVATLLHEMKRRGRD------CRFGVISMCIGTG 412 (445)
Q Consensus 377 ~~GatG~~~i~~~l~~L~~~~~~------~~~G~~~~~~G~G 412 (445)
|+|+||++++.++++||+++++. ++.|+++...|.|
T Consensus 386 P~gAtG~~~v~e~~~QLrg~ag~~Qv~~~~~~gl~~~~Gg~~ 427 (438)
T PTZ00455 386 PVGATGVKQIMEVYRQMKGQCGEYQMKNIPALGATLNMGGDD 427 (438)
T ss_pred CcchHHHHHHHHHHHHHhhccccCCCCCcccEEEEeccCCCc
Confidence 99999999999999999987642 2556665543333
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-48 Score=396.81 Aligned_cols=319 Identities=22% Similarity=0.287 Sum_probs=266.2
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcc-cchHHHHHHHHcCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ-RASECRMAAFYAGFPE 127 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~-~~~~a~~~~~~lGl~~ 127 (445)
|++|+|||+++|||.++ ++.++.+|+.+|+++||+++||++++||.+++|+..++... ..+++..++..+|++
T Consensus 1 m~~v~IvG~~~tp~~~~-----~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~- 74 (389)
T PRK06064 1 MRDVAIIGVGQTKFGEL-----WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA- 74 (389)
T ss_pred CCcEEEEEcccccceec-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-
Confidence 46899999999999864 46889999999999999999999999999999988665531 245677788899996
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCccc-----hh------hh--hhhcc---ccchhHhHHHH
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPKV-----KA------FE--QAQNC---LLPMGVTSENV 186 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~~-----~~------~~--~~~~~---~~~mg~~ae~~ 186 (445)
..|.++++++|+|++.+|..|+++|++|.++++ +..+.. .. +. +.+.. ...|++.+++|
T Consensus 75 ~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~ 154 (389)
T PRK06064 75 PIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRY 154 (389)
T ss_pred CCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHH
Confidence 689999999999999999999999999999998 111110 00 00 00100 11478889999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCC
Q 013344 187 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 266 (445)
Q Consensus 187 a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~ 266 (445)
+++||+|||+++.+++++|++|.+||++ +| ++++|.|++++++++++|
T Consensus 155 ~~~yG~s~e~~a~~a~~~~~~A~~np~a-~~------------------------------~~~~t~~~~~~s~~i~~P- 202 (389)
T PRK06064 155 MHKYGTTEEDLALVAVKNHYNGSKNPYA-QF------------------------------QKEITVEQVLNSPPVADP- 202 (389)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHhhCcHh-hh------------------------------CCCCCHHHHhcCCcccCC-
Confidence 9999999999999999999999999986 22 335899999999999876
Q ss_pred CccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCC------CC-CCccHHHHHHHHHHHcCCCCCCcc
Q 013344 267 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP------AI-MGVGPAVAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 267 G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p------~~-~~~~~~~ai~~aL~~aGl~~~DID 339 (445)
+|.+|+|+++|||+++||++++.|++++.++. ++.+++.....+ +. ...++..+++++|+++||+++|||
T Consensus 203 --l~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v-~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did 279 (389)
T PRK06064 203 --LKLLDCSPITDGAAAVILASEEKAKEYTDTPV-WIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDID 279 (389)
T ss_pred --CchhhcCCCCCcceEEEEecHHHHHHhcCCCe-EEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCC
Confidence 99999999999999999999999999886664 888887654332 22 234456899999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC--CC
Q 013344 340 LFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--RD 399 (445)
Q Consensus 340 ~~e~h~~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~--~~ 399 (445)
++|+|++|+.+.+..+|.|||+++ |+|++||.|++|||+|+||+++++++++||+++. +.
T Consensus 280 ~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~ 359 (389)
T PRK06064 280 VAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGR 359 (389)
T ss_pred EEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999874 8999999999999999999999999999999886 42
Q ss_pred -----CceeeEEEe
Q 013344 400 -----CRFGVISMC 408 (445)
Q Consensus 400 -----~~~G~~~~~ 408 (445)
++.++.+..
T Consensus 360 rqv~~a~~~l~~~~ 373 (389)
T PRK06064 360 QQVIGAGYGLTHNV 373 (389)
T ss_pred ccCCCccEEEEecC
Confidence 356666653
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-48 Score=397.15 Aligned_cols=321 Identities=22% Similarity=0.265 Sum_probs=253.9
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcc-cchHHHHHHHHcCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ-RASECRMAAFYAGFPE 127 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~-~~~~a~~~~~~lGl~~ 127 (445)
|++|+|+|+++|||+|+ ++.++.+|+.+|+++||+++||++++||.|++|++.++... ....+..+...+|+.
T Consensus 1 ~~~v~Ivg~g~tpfgr~-----~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~- 74 (389)
T PRK07516 1 MMTASIVGWAHTPFGKL-----DAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR- 74 (389)
T ss_pred CCcEEEEeCCcceeeec-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-
Confidence 56899999999999973 47889999999999999999999999999999987544321 112233344466774
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--cc-c-h------hh-hhhhc----cccchhHhHHHH
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PK-V-K------AF-EQAQN----CLLPMGVTSENV 186 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~-~-~------~~-~~~~~----~~~~mg~~ae~~ 186 (445)
..|.++|+++|+||+.||..|+++|++|.++++ + ++ +. . . .+ ....+ ....|++.+++|
T Consensus 75 ~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y 154 (389)
T PRK07516 75 FKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAY 154 (389)
T ss_pred CCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHH
Confidence 689999999999999999999999999999998 1 11 10 0 0 00 00000 111489999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHH----HhcCCCc
Q 013344 187 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSE----LAKLKPV 262 (445)
Q Consensus 187 a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~----l~~~~p~ 262 (445)
+++||++||+++.+++++|++|.+||.+. |+ +++|.|+ +.+++++
T Consensus 155 ~~~yg~~~e~~a~vav~~~~~A~~nP~A~-~~------------------------------~~~t~~~~~~~~~~~~~i 203 (389)
T PRK07516 155 FQRYGDQSDALAMIAAKNHANGVANPYAQ-MR------------------------------KDLGFEFCRTVSEKNPLV 203 (389)
T ss_pred HHHHCCCHHHHHHHHHHHHHhhhcCChhh-cC------------------------------CcccHHhhhhhhhcCCcc
Confidence 99999999999999999999999999872 22 1244443 4445554
Q ss_pred ccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeec-------CCCCCCccHHHHHHHHHHHcCCCC
Q 013344 263 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-------DPAIMGVGPAVAIPAAVKSAGLQL 335 (445)
Q Consensus 263 ~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~-------~p~~~~~~~~~ai~~aL~~aGl~~ 335 (445)
.+ ++|.+|||+++|||+|+||++++.+++++. ..++.+++.... +|. ...++..+++++|+++||++
T Consensus 204 ~~---pl~~~d~~~~~DGAaa~il~s~~~a~~~~~--~v~i~g~~~~~~~~~~~~~~~~-~~~~~~~a~~~a~~~agl~~ 277 (389)
T PRK07516 204 AG---PLRRTDCSLVSDGAAALVLADAETARALQR--AVRFRARAHVNDFLPLSRRDPL-AFEGPRRAWQRALAQAGVTL 277 (389)
T ss_pred cC---CCchhhcCCcCcceEEEEEecHHHHHhcCC--CEEEEEEEeccCcccccCCCcc-ccHHHHHHHHHHHHHcCCCH
Confidence 43 489999999999999999999999998853 357777766421 221 23556789999999999999
Q ss_pred CCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 336 DDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 336 ~DID~~e~h~~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
+|||++|+||+|+.+.+..+|.|||+++ |+|++||++++|||+|+||.+++.++++||+++.
T Consensus 278 ~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~a 357 (389)
T PRK07516 278 DDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEA 357 (389)
T ss_pred HHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999986 9999999999999999999999999999999875
Q ss_pred CC-----CceeeEEEeeccc
Q 013344 398 RD-----CRFGVISMCIGTG 412 (445)
Q Consensus 398 ~~-----~~~G~~~~~~G~G 412 (445)
+. ++.|+++...|.|
T Consensus 358 g~rQv~~a~~~l~~~~gg~~ 377 (389)
T PRK07516 358 GGMQIPGAKLAGVFNMGGAA 377 (389)
T ss_pred cCCcCCchheeeeeccCccc
Confidence 42 4567666644444
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-47 Score=388.97 Aligned_cols=312 Identities=25% Similarity=0.344 Sum_probs=264.9
Q ss_pred EEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEe
Q 013344 55 VAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV 134 (445)
Q Consensus 55 vg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v 134 (445)
+|.+.|||+|+ .+.++.+|+.+|+++||+++||++++||.+++|++.++.. ...+++.++..+|++ .++.+++
T Consensus 1 vG~g~t~~~~~-----~~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lGl~-~~~~~~v 73 (375)
T cd00829 1 VGVGMTPFGRR-----SDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRF-QSFPGALIAEYLGLL-GKPATRV 73 (375)
T ss_pred CeeeecCcccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccc-ccchHHHHHHHcCCC-CcceeeE
Confidence 47899999974 2788999999999999999999999999999999877653 346888899999997 7899999
Q ss_pred cCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCcc--c---hh------hhh--hhc---cccchhHhHHHHHHHhCC
Q 013344 135 NRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNPK--V---KA------FEQ--AQN---CLLPMGVTSENVAHRFGV 192 (445)
Q Consensus 135 ~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~~--~---~~------~~~--~~~---~~~~mg~~ae~~a~~~gi 192 (445)
+++|+|++.++..|+++|++|.++++ + ++.. . .. +.. ... ....|++.+++|+++||+
T Consensus 74 ~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~ 153 (375)
T cd00829 74 EAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGT 153 (375)
T ss_pred eCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999998 1 1111 0 00 000 001 122588999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccC
Q 013344 193 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAG 272 (445)
Q Consensus 193 sre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~ 272 (445)
|||++|.+++++|++|.+||.+ +|+ .++|+|++.+++|+++| +|.+
T Consensus 154 t~e~~~~va~~~~~~A~~np~A-~~~------------------------------~~~t~d~~~~~~~i~~p---l~~~ 199 (375)
T cd00829 154 TREDLAKVAVKNHRNAARNPYA-QFR------------------------------KPITVEDVLNSRMIADP---LRLL 199 (375)
T ss_pred CHHHHHHHHHHHHHHHhcCChh-hcC------------------------------CCCCHHHHhcCCcccCC---Cchh
Confidence 9999999999999999999987 443 25899999999999965 9999
Q ss_pred CCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCC-------CCccHHHHHHHHHHHcCCCCCCccEEEecC
Q 013344 273 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI-------MGVGPAVAIPAAVKSAGLQLDDIDLFEINE 345 (445)
Q Consensus 273 ~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~-------~~~~~~~ai~~aL~~aGl~~~DID~~e~h~ 345 (445)
|||+++|||+++||++++.|+++ .++.+++.+++.....+.. +..++..+++++|+++||+++|||++|+||
T Consensus 200 ~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d 278 (375)
T cd00829 200 DCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYD 278 (375)
T ss_pred hcCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence 99999999999999999999998 5667789998876655432 556778999999999999999999999999
Q ss_pred CChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCC-----Cce
Q 013344 346 AFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRD-----CRF 402 (445)
Q Consensus 346 ~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~-----~~~ 402 (445)
+|+.+.+.++|.|||+++ |+|++||+|++|||+|+||++++.++++||+++.+. ++.
T Consensus 279 ~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ag~~qv~~~~~ 358 (375)
T cd00829 279 CFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGEAGARQVPGARV 358 (375)
T ss_pred cChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCCcccccCCCccE
Confidence 999999999999999983 899999999999999999999999999999987532 255
Q ss_pred eeEEEe
Q 013344 403 GVISMC 408 (445)
Q Consensus 403 G~~~~~ 408 (445)
++++..
T Consensus 359 ~l~~~~ 364 (375)
T cd00829 359 GLAHNI 364 (375)
T ss_pred EEEecC
Confidence 555543
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-47 Score=385.00 Aligned_cols=317 Identities=18% Similarity=0.180 Sum_probs=262.2
Q ss_pred CCcEEEEEeeeecc-ccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCccc-chHHHHHHHHcCCC
Q 013344 49 GDDVVIVAAYRTAL-CKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR-ASECRMAAFYAGFP 126 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~-~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~-~~~a~~~~~~lGl~ 126 (445)
|++|+|||++.|+| .++ .+.++.+|+.+|+++||+++||+++|||.+++++ .++.+.+ ..++..++..+|+.
T Consensus 2 ~~~v~IvG~g~t~~~~~~-----~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~ 75 (386)
T PRK08313 2 KRLAAVLGTGQTKYVAKR-----QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGAT 75 (386)
T ss_pred CCcEEEEEeecCCcCccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCC
Confidence 46899999999999 543 4678899999999999999999999999999987 3443211 24556677799995
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCcc--chhhh------h--hhccccchhHhHHHHHHHh
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNPK--VKAFE------Q--AQNCLLPMGVTSENVAHRF 190 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~~--~~~~~------~--~~~~~~~mg~~ae~~a~~~ 190 (445)
..++++++.+|++|..++..|+++|++|.++++ + +... ..... . .......+++.+++|+++|
T Consensus 76 -~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~ 154 (386)
T PRK08313 76 -GKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRS 154 (386)
T ss_pred -CCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999998 1 1111 00000 0 0001123678899999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCC-CCCHHHHhcCCCcccCCCcc
Q 013344 191 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRP-NTSVSELAKLKPVFKKDGTT 269 (445)
Q Consensus 191 gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~-~~t~e~l~~~~p~~~~~G~~ 269 (445)
|.++|++..+++++|++|.+||+|- | |+ ++|+|++++++++.+| +
T Consensus 155 G~~~e~la~vav~~~~~A~~NP~A~-~------------------------------r~~~~t~e~v~~s~~ia~P---l 200 (386)
T PRK08313 155 GAPEHIGAMVAVKDRLNGAKNPYAH-L------------------------------HQPDITLEKVMASQMLWDP---I 200 (386)
T ss_pred CcCHHHHHHHHHHHHHHHccCcHHh-c------------------------------CCCCCCHHHHhcCCcccCC---C
Confidence 9999999999999999999999882 2 33 3899999999999876 9
Q ss_pred ccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCC-------CCCccHHHHHHHHHHHcCCC--CCCccE
Q 013344 270 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-------IMGVGPAVAIPAAVKSAGLQ--LDDIDL 340 (445)
Q Consensus 270 t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~-------~~~~~~~~ai~~aL~~aGl~--~~DID~ 340 (445)
|..|||+++|||+|+||++++.+++++.++..++.+++... ++. ....++..+++++|+++|++ ++|||+
T Consensus 201 ~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~-~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~ 279 (386)
T PRK08313 201 RFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRT-EPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDV 279 (386)
T ss_pred chhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEe-cCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCE
Confidence 99999999999999999999999998878888888887653 222 22345668999999999998 799999
Q ss_pred EEecCCChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCC---
Q 013344 341 FEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRD--- 399 (445)
Q Consensus 341 ~e~h~~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~--- 399 (445)
+|+||+|+.+.+..+|.|||+++ |+|++||+|+ |||.|+||+.++.++++||+++.+.
T Consensus 280 ~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l~-g~p~gatG~~~~~e~~~qlrG~ag~rQv 358 (386)
T PRK08313 280 AEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNPSGGVLS-SNPIGASGMIRFAEAALQVMGKAGEHQV 358 (386)
T ss_pred EEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCcccc-cCCCcHHHHHHHHHHHHHhcccccCCcC
Confidence 99999999999999999999987 9999999999 9999999999999999999987542
Q ss_pred --CceeeEEEe
Q 013344 400 --CRFGVISMC 408 (445)
Q Consensus 400 --~~~G~~~~~ 408 (445)
++.|+++..
T Consensus 359 ~~a~~~l~~~~ 369 (386)
T PRK08313 359 DGARKALGHAY 369 (386)
T ss_pred CCccEEEEecc
Confidence 356666654
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-47 Score=386.50 Aligned_cols=316 Identities=21% Similarity=0.249 Sum_probs=258.8
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~ 129 (445)
++|+|||++.|||+|+ .+.++.+|+.+|+++||+++||+++|||.+++++.... .++..++..+|++ ..
T Consensus 8 ~~vaIvG~g~t~~~~~-----~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~~-----~~~~~la~~lGl~-~~ 76 (384)
T PRK06158 8 GRTAIVGAATAGLGEA-----PGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDDA-----LWGLSVAEYLGIR-PR 76 (384)
T ss_pred CCEEEEEeeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCC-----CcHHHHHHHcCCC-Ce
Confidence 6899999999999864 46889999999999999999999999999999874321 3445577789996 47
Q ss_pred ceEEecCcCcHHHHHHHHHHHHHHcCCCCeEec------Ccc---chh---hh--hhhcc----ccchhHhHHHHHHHhC
Q 013344 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSV------NPK---VKA---FE--QAQNC----LLPMGVTSENVAHRFG 191 (445)
Q Consensus 130 ~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~------~~~---~~~---~~--~~~~~----~~~mg~~ae~~a~~~g 191 (445)
+.++++.+|+|+..+|..|+++|++|.++++.+ .+. ... +. ..+.. ...+++.+++|+++||
T Consensus 77 ~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG 156 (384)
T PRK06158 77 FVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYG 156 (384)
T ss_pred eeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHC
Confidence 788899999999999999999999999999921 110 111 00 01101 1136788999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCcccc
Q 013344 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTA 271 (445)
Q Consensus 192 isre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~ 271 (445)
+|+|+++.+++++|++|..||+|. .|+++|+|++++++++.+| +|.
T Consensus 157 ~t~e~~a~vav~~~~~a~~NP~A~-------------------------------~~~~~t~e~vl~s~~ia~P---l~~ 202 (384)
T PRK06158 157 TTREQLAEVAVAARQWAQLNPEAF-------------------------------MRDPLTIDDVLAARMVSDP---LSV 202 (384)
T ss_pred cCHHHHHHHHHHHHHHHhcCchhh-------------------------------hCCCCCHHHHhcCCccCCC---Cch
Confidence 999999999999999999999872 2346899999999999865 999
Q ss_pred CCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeec------CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecC
Q 013344 272 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV------DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 345 (445)
Q Consensus 272 ~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~------~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~ 345 (445)
.+||+++|||+|+||++++.|++++.++ .++.+++.... .|.........+++++|+++|++++|||++|+||
T Consensus 203 ~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD 281 (384)
T PRK06158 203 RDCCLVTDGAGAVVMVRADRARDLPRPP-VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYD 281 (384)
T ss_pred hhcCCccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecC
Confidence 9999999999999999999999987766 46776664321 1222334456799999999999999999999999
Q ss_pred CChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCC-----Cce
Q 013344 346 AFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRD-----CRF 402 (445)
Q Consensus 346 ~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~-----~~~ 402 (445)
+|+.+.+..+|.|||+++ |+|++||+|++||| |+||+.++.++++||+++.+. ++.
T Consensus 282 ~Fs~~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~ag~rQv~~a~~ 360 (384)
T PRK06158 282 AFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEAGERQVAGAEV 360 (384)
T ss_pred CchHHHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCCCCCcCCCCCE
Confidence 999999999999999987 89999999999999 999999999999999987542 366
Q ss_pred eeEEEeeccc
Q 013344 403 GVISMCIGTG 412 (445)
Q Consensus 403 G~~~~~~G~G 412 (445)
|+++...|.+
T Consensus 361 gl~~~~Gg~~ 370 (384)
T PRK06158 361 ALAHGNGGVL 370 (384)
T ss_pred EEEECCCCcc
Confidence 7776643333
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-46 Score=380.42 Aligned_cols=320 Identities=17% Similarity=0.186 Sum_probs=259.4
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCccc-chHHHHHHHHcCCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR-ASECRMAAFYAGFPET 128 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~-~~~a~~~~~~lGl~~~ 128 (445)
++|+|+|++.|||+|+ .+.+..+|+.+|+++||+++||+++|||.+++++. ++...+ ...+..++..+|+. .
T Consensus 9 ~~vaIvG~g~t~~~~~-----~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~-~~~~~~~~~~a~~l~~~lG~~-~ 81 (392)
T PRK06065 9 KRVAVIGAGLTLFRRR-----LLETPQELAWEAASKALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLSHGSGGI-R 81 (392)
T ss_pred CceEEEEecccCCcCC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-CCcccccccHHHHHHHHcCCC-C
Confidence 4799999999999975 36788999999999999999999999999999863 332211 22455677788885 4
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCcc---ch---hhh-h----hhcccc---chhHhHHHHHH
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNPK---VK---AFE-Q----AQNCLL---PMGVTSENVAH 188 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~~---~~---~~~-~----~~~~~~---~mg~~ae~~a~ 188 (445)
.|+++|+.+|+||..++..|+++|++|.+|++ + +... .. ... + .+.... .+++.+++|++
T Consensus 82 ~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~ 161 (392)
T PRK06065 82 KPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMA 161 (392)
T ss_pred CCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999998 1 2111 00 000 0 011111 26788999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCc
Q 013344 189 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 268 (445)
Q Consensus 189 ~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~ 268 (445)
+||+++|++..+++++|++|.+||+|. .|+++|+|++++++++.+|
T Consensus 162 ~yG~~~e~lA~vav~~~~~A~~NP~A~-------------------------------~r~~lt~e~vl~s~~ia~P--- 207 (392)
T PRK06065 162 TYGIKKEEIALVSVKNKRNALNNPYAQ-------------------------------LGSKITVEDVLKSEVLVWP--- 207 (392)
T ss_pred HHCcCHHHHHHHHHHHHHhhccCchhh-------------------------------hcCCCCHHHHhcCCcccCC---
Confidence 999999999999999999999999883 2446899999999999876
Q ss_pred cccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCC-------CCCCccHHHHHHHHHHHcCCCC--CCcc
Q 013344 269 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP-------AIMGVGPAVAIPAAVKSAGLQL--DDID 339 (445)
Q Consensus 269 ~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p-------~~~~~~~~~ai~~aL~~aGl~~--~DID 339 (445)
+|..+||+++|||+|+||++++.|++++.++. ++.+++.. .++ .....++..+++++|+++|+++ +|||
T Consensus 208 l~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v-~I~g~~~~-~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD 285 (392)
T PRK06065 208 VQLLDVSPVSDGAAAIVLASEDLARRYTDTPV-WVEGVGWT-LDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEID 285 (392)
T ss_pred CchhhcCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEe-cCccccccccccccHHHHHHHHHHHHHcCCCCchhhCc
Confidence 99999999999999999999999999987774 67777653 222 1122335689999999999985 9999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCC--
Q 013344 340 LFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRD-- 399 (445)
Q Consensus 340 ~~e~h~~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~-- 399 (445)
++|+||+|+.+.+.++|.|||+++ |+|++||+|++|||+|+||..++.++++||+++.+.
T Consensus 286 ~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ag~rQ 365 (392)
T PRK06065 286 VAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTAGKMQ 365 (392)
T ss_pred EEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhccccCCc
Confidence 999999999999999999999985 999999999999999999999999999999988653
Q ss_pred ---C-ceeeEEEeeccc
Q 013344 400 ---C-RFGVISMCIGTG 412 (445)
Q Consensus 400 ---~-~~G~~~~~~G~G 412 (445)
+ +.|+++...|.+
T Consensus 366 v~~a~~~~l~~~~Gg~~ 382 (392)
T PRK06065 366 VKKPVHTGVAQAWGDLM 382 (392)
T ss_pred CCCccceeEEecccccc
Confidence 2 355555533333
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-46 Score=378.05 Aligned_cols=315 Identities=18% Similarity=0.217 Sum_probs=253.2
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcC-CCC-CCCCcEEEEeccCCCccc-chHHHHHHHHcC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTN-VDP-SEVGDIVVGTVLAPGSQR-ASECRMAAFYAG 124 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Ag-i~~-~dId~vi~g~~~~~~~~~-~~~a~~~~~~lG 124 (445)
+|++|+|+|++.|||+|++ ++.+..+|+.+|+++||+|+| |++ +|||.+++++. +.+.+ ......+...+|
T Consensus 2 ~~~~vaIvG~g~t~~~~~~----~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~--~~~~~~~~~~~~~~~~lg 75 (385)
T PRK06066 2 FLNRVAIVGIGWYGFRPTT----PEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE--DFWEGIAIADEFAPDQIG 75 (385)
T ss_pred CCCcEEEEEeeecCCcCCC----CCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC--cccCcccccchhHHHHcc
Confidence 6899999999999999642 467889999999999999999 997 79999988642 21111 112233446788
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCc--c---chhhhh-----hhcc-cc---chhHhHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNP--K---VKAFEQ-----AQNC-LL---PMGVTSE 184 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~--~---~~~~~~-----~~~~-~~---~mg~~ae 184 (445)
+. ..|.+.+ |+|+..++..|++.|++|.+|++ .+.. . +..... .+.. .. .+++.++
T Consensus 76 ~~-~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~ 151 (385)
T PRK06066 76 GA-MRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAV 151 (385)
T ss_pred cC-CCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHH
Confidence 84 3577776 89999999999999999999999 1111 0 000000 1101 11 2478899
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCccc
Q 013344 185 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 264 (445)
Q Consensus 185 ~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~ 264 (445)
+|+++||+++|++..+++++|++|.+||+|. .|+++|+|++++++++.+
T Consensus 152 rym~~yG~t~E~lA~Vavk~r~nA~~NP~A~-------------------------------~r~~~t~edvl~S~~ia~ 200 (385)
T PRK06066 152 KFMSRKGITREDLALVVEKNKKAGLSNPRAS-------------------------------YASNISLEDVLSSEYVVY 200 (385)
T ss_pred HHHHHHCcCHHHHHHHHHHHHHHHhcCChhh-------------------------------cCCCCCHHHHhcCCcccC
Confidence 9999999999999999999999999999983 234689999999999987
Q ss_pred CCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEee----cCCCCCCccHH--HHHHHHHHHcCCC--CC
Q 013344 265 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG----VDPAIMGVGPA--VAIPAAVKSAGLQ--LD 336 (445)
Q Consensus 265 ~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~----~~p~~~~~~~~--~ai~~aL~~aGl~--~~ 336 (445)
| +|.+|||+++|||+|+||++++.+++++.+|+ ++.+++... ..+..+...+. .+++++|+++||+ ++
T Consensus 201 P---l~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~ 276 (385)
T PRK06066 201 P---LTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRK 276 (385)
T ss_pred C---chhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHH
Confidence 6 99999999999999999999999999988887 888776532 23344444453 7999999999998 79
Q ss_pred CccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCC
Q 013344 337 DIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR 398 (445)
Q Consensus 337 DID~~e~h~~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~ 398 (445)
|||++|+||+|+.+.+.++|.|||+++ |+|++||+|++|||+|+||++++.++++||+++.+
T Consensus 277 DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~Ag 356 (385)
T PRK06066 277 EVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEAG 356 (385)
T ss_pred HCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHccccc
Confidence 999999999999999999999999983 69999999999999999999999999999998653
Q ss_pred C----CceeeEEE
Q 013344 399 D----CRFGVISM 407 (445)
Q Consensus 399 ~----~~~G~~~~ 407 (445)
. ++.++.+.
T Consensus 357 ~rQ~~a~~~l~~~ 369 (385)
T PRK06066 357 ARQGKAERAVVAS 369 (385)
T ss_pred ccCCCCcEEEEcC
Confidence 2 35566554
|
|
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-48 Score=359.90 Aligned_cols=362 Identities=36% Similarity=0.543 Sum_probs=313.4
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
+|.++++|.+.||||--. ...++++-+.||+.++.+..|++..++.+.||.||+|++.++-- ..+.+|.+++..|++.
T Consensus 40 n~~nivlvdgvrtpfl~s-gt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevk-tsniareaal~agfsd 117 (465)
T KOG1392|consen 40 NMPNIVLVDGVRTPFLVS-GTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVK-TSNIAREAALLAGFSD 117 (465)
T ss_pred CCCceEEEecccCceeec-ccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHh-cchHHHHHHHhcCCCC
Confidence 347999999999999754 23688999999999999999999999999999999999988765 6789999999999999
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCc-------c-----chhh--------------hhhhc--
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNP-------K-----VKAF--------------EQAQN-- 174 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~-------~-----~~~~--------------~~~~~-- 174 (445)
..|+.+|..+|-|.-+|+.....+|++|.+|+. ++.+ + +.+. ....+
T Consensus 118 ktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~nfl 197 (465)
T KOG1392|consen 118 KTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKNFL 197 (465)
T ss_pred CCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhhcc
Confidence 999999999999999999999999999999987 1111 0 0000 00111
Q ss_pred -----------cccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeecc
Q 013344 175 -----------CLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISV 243 (445)
Q Consensus 175 -----------~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~ 243 (445)
..-.||-.+++++..|++||.|+|+++++||..|.++++.|+|.+ ++|+++..+||+ ..+
T Consensus 198 apelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftd-vvpfkv~gkd~~--------t~k 268 (465)
T KOG1392|consen 198 APELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTD-VVPFKVDGKDPK--------TIK 268 (465)
T ss_pred CcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccc-eeeEecCCCCcc--------eec
Confidence 112488889999999999999999999999999999999999986 789998877764 337
Q ss_pred CCCCCCCCCHHHHhcCCCccc-CCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCC-CCCccHH
Q 013344 244 DDGIRPNTSVSELAKLKPVFK-KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-IMGVGPA 321 (445)
Q Consensus 244 d~~~r~~~t~e~l~~~~p~~~-~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~-~~~~~~~ 321 (445)
|.++|. .++|+|.+++|.|- |.|++|+.|++-+.|||.|++++.+|.|..+|.+|-+.+..+-....+|. ..-.+|+
T Consensus 269 dngirv-ssle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgpa 347 (465)
T KOG1392|consen 269 DNGIRV-SSLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGPA 347 (465)
T ss_pred CCCccc-CCHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheecccc
Confidence 899986 68999999999996 57999999999999999999999999999999999888888777777774 4567899
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHH----------cCC------C-CCCcCCCCChhcccChhhhHHHH
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNK----------LGL------D-PEKINVNGGALAIGHPLGTTGAR 384 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~----------LGl------~-~~~vn~~gG~la~Gh~~GatG~~ 384 (445)
.+|+++|+++||+..|||.||+|++|+.+.+.-.++ +|. + .+++|.+||.+++|||+|+||.+
T Consensus 348 y~ipkll~kagltlkdid~feiheafagqilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvr 427 (465)
T KOG1392|consen 348 YVIPKLLDKAGLTLKDIDVFEIHEAFAGQILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVR 427 (465)
T ss_pred cccHHHHHHcCCcccccchhhhHHHHhHHHHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchh
Confidence 999999999999999999999999999987644333 333 2 26999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEEcc
Q 013344 385 CVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGD 423 (445)
Q Consensus 385 ~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~~~ 423 (445)
......++|+++++ ++|++..|..+|+|.+++++++.
T Consensus 428 l~mh~anrl~~e~g--qygvvaacaaggqgvamlieayp 464 (465)
T KOG1392|consen 428 LAMHSANRLKEEKG--QYGVVAACAAGGQGVAMLIEAYP 464 (465)
T ss_pred hHHHHHhHHHhhcC--ceeEeehhhcCCcceEEEeeccC
Confidence 99999999999999 99999999999999999999864
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-46 Score=359.88 Aligned_cols=235 Identities=48% Similarity=0.712 Sum_probs=191.8
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++||||++.||||++ +.|.|++.++.+|+.++++++|++++|+|++||.|++|++.+... ++++++.+++.+|+|.+
T Consensus 1 M~~v~Iv~a~RTPfg~-~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~-g~~~ar~~~l~aGl~~~ 78 (264)
T PF00108_consen 1 MRDVVIVGAVRTPFGK-FGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGE-GQNIARQAALAAGLPES 78 (264)
T ss_dssp -TTEEEEEEEEE--EC-TTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTT-TCHHHHHHHHHTTS-TT
T ss_pred CCCEEEEEeeeCcccc-CCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCccccccccc-chhhhhhhhhhcccccc
Confidence 7899999999999995 678999999999999999999999999999999999999999877 88999999999999988
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCc--cch---------------hh-----hhhhccccchh
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNP--KVK---------------AF-----EQAQNCLLPMG 180 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~--~~~---------------~~-----~~~~~~~~~mg 180 (445)
+|+++|+++|+||++||.+|+..|++|.+|++ .++. ... +. ..+..+..+||
T Consensus 79 vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~Mg 158 (264)
T PF00108_consen 79 VPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSRRWGAPLGDAKLEDSLLRDGLYDPYAGQPMG 158 (264)
T ss_dssp SEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCTTSTSSSSGEEEEEHHHHHTTCCTTTTSHHH
T ss_pred cceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccccccccccccccccCccccccccccccccccccccccc
Confidence 99999999999999999999999999999998 1211 000 00 11223456899
Q ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCC
Q 013344 181 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 260 (445)
Q Consensus 181 ~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~ 260 (445)
.++|+++++||||||++|.|+++||+||.+|+.+|+|++||+||+++.++ | +..+++.|+++|+++|+|+|.+++
T Consensus 159 ~tAE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~---g--~~~~~~~De~~r~~~~~e~l~~L~ 233 (264)
T PF00108_consen 159 ITAENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKK---G--EEVTVDRDEGIRPDTTLEKLAKLK 233 (264)
T ss_dssp HHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETT---S--EEEEE-S-STCGTT--HHHHHTS-
T ss_pred cccccccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeeccc---c--ceeeeeccchhhcchhHHHHhccc
Confidence 99999999999999999999999999999999999999999999886532 2 126899999999999999999999
Q ss_pred CcccCC-CccccCCCCCCCCCCeeEEeeCHH
Q 013344 261 PVFKKD-GTTTAGNSSQVSDGAGAVLLMKRS 290 (445)
Q Consensus 261 p~~~~~-G~~t~~~~~~~~DGAaAvvL~s~~ 290 (445)
|+|.++ |++|.+|+|+++|||+++||++++
T Consensus 234 p~f~~~~G~vTagnss~~~DGAaa~~l~see 264 (264)
T PF00108_consen 234 PAFRKDGGTVTAGNSSPLNDGAAAVLLMSEE 264 (264)
T ss_dssp BSSSTTTSS-BTTTB--BEEEEEEEEEEEHH
T ss_pred ccccccccccccccCCCccchhheEEEeecC
Confidence 999987 999999999999999999999975
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-44 Score=361.32 Aligned_cols=313 Identities=20% Similarity=0.243 Sum_probs=253.9
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~ 129 (445)
++|+|||++.|+|+|+ .+.++.+|+.+|+++||+|+||+++|||.+++.+.. .. ..+ ..++..+|+. ..
T Consensus 5 ~~vaIvG~g~t~~~~~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~-~~---~~~-~~~~~~lGl~-~~ 73 (388)
T PRK08142 5 GKAYIVGAYEHPTRKA-----PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDA-PG---LGP-ASMVDYLGLK-LR 73 (388)
T ss_pred CCEEEEEEeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC-CC---ccH-HHHHHhCCCC-Ce
Confidence 5799999999999975 467789999999999999999999999997752211 11 112 2366789995 46
Q ss_pred ceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCcc---ch---hhh---hhhccc--------cchhHhHHHH
Q 013344 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNPK---VK---AFE---QAQNCL--------LPMGVTSENV 186 (445)
Q Consensus 130 ~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~~---~~---~~~---~~~~~~--------~~mg~~ae~~ 186 (445)
+...++.+|+|+..++..|+..|++|.+|+| + +.+. .. .+. ....+. ..+++.+++|
T Consensus 74 ~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~y 153 (388)
T PRK08142 74 HVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRH 153 (388)
T ss_pred eeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHH
Confidence 7888999999999999999999999999999 1 1110 00 000 000111 1256779999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCC
Q 013344 187 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 266 (445)
Q Consensus 187 a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~ 266 (445)
+++||.++|++..+++++|++|.+||+|. .|+++|+|++++++++.+|
T Consensus 154 m~~yG~t~e~la~vav~~~~~A~~NP~A~-------------------------------~r~~~t~e~vl~s~~Ia~P- 201 (388)
T PRK08142 154 MHEYGTTSEQLAWIKVAASHHAQHNPHAM-------------------------------LRDVVTVEDVLNSPMIADP- 201 (388)
T ss_pred HHHHCcCHHHHHHHHHHHHHHhccCChhh-------------------------------cCCCCCHHHHhcCCcccCC-
Confidence 99999999999999999999999999882 2346899999999999876
Q ss_pred CccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 013344 267 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 341 (445)
Q Consensus 267 G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~ 341 (445)
+|..+||+++|||+|+||++++.|++++.++ .++.+++... ..|+.....+..+++++|+++|++++|||++
T Consensus 202 --l~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~ 278 (388)
T PRK08142 202 --LHRLDCCVVTDGGGALVVVRPEIARSLKRPL-VKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYA 278 (388)
T ss_pred --chhhccCcccCceEEEEEecHHHHhhcCCCC-EEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 9999999999999999999999999987544 6888877642 1233334455689999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCC-------------------CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCC----
Q 013344 342 EINEAFASQFVYCRNKLGLDPE-------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR---- 398 (445)
Q Consensus 342 e~h~~~~~~~~~~~e~LGl~~~-------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~---- 398 (445)
|+||+|+.+.+..+|.|||+++ |+|++||.++.|||.|+||..++.|+++||+++.+
T Consensus 279 elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag~~rQ 358 (388)
T PRK08142 279 SIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAHPAVQ 358 (388)
T ss_pred EEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999999764 88999999999999999999999999999997742
Q ss_pred --CCceeeEEEe
Q 013344 399 --DCRFGVISMC 408 (445)
Q Consensus 399 --~~~~G~~~~~ 408 (445)
.++.|+++..
T Consensus 359 V~~a~~gl~~~~ 370 (388)
T PRK08142 359 VPNCDLALAHGT 370 (388)
T ss_pred CCCCcEEEEeCC
Confidence 2366776653
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-43 Score=352.59 Aligned_cols=312 Identities=18% Similarity=0.170 Sum_probs=245.4
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCH-HHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccch-HHHHHHHHcCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYP-DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRAS-ECRMAAFYAGFP 126 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~-~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~-~a~~~~~~lGl~ 126 (445)
|++|+|+|.+.|||+|+. .+.+. .+|+.+|+++||+|+||+++|||.++.++. +...+.. ........+|+.
T Consensus 1 M~~vaIvG~g~t~~~~~~----~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~~~~~~~~~~~~~G~~ 74 (352)
T PRK07937 1 MRDVAVVGFAQAPHVRRT----DGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS--DYLAGRAFSFISAIDSIGAV 74 (352)
T ss_pred CCcEEEEEeeccccccCC----CCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc--ccccccccchhhHHhhccCC
Confidence 578999999999999752 13444 899999999999999999999998865432 3321221 222233467773
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCc-cc---h-hhhhh----h---ccccchhHhHHHHHH
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNP-KV---K-AFEQA----Q---NCLLPMGVTSENVAH 188 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~-~~---~-~~~~~----~---~~~~~mg~~ae~~a~ 188 (445)
...|...++ ++|..++..|++.|++|.+|+| ++.. .. . ...+. + .....+++.+++|++
T Consensus 75 ~~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~ 151 (352)
T PRK07937 75 PPINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLD 151 (352)
T ss_pred CCCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHH
Confidence 334555555 4688899999999999999999 1111 00 0 00000 0 011236788999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCc
Q 013344 189 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 268 (445)
Q Consensus 189 ~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~ 268 (445)
+||.++|++..+++++|++|.+||+|. .| +|+|++++++++.+|
T Consensus 152 ~yG~t~e~lA~vavk~r~nA~~NP~A~-------------------------------~r--it~edvl~s~~ia~P--- 195 (352)
T PRK07937 152 AGKWTEEQMAEVAARSRADARRNPSAE-------------------------------PS--ISVDELLARPYFADP--- 195 (352)
T ss_pred HhCCCHHHHHHHHHHHHHHHhhCchhh-------------------------------cc--CCHHHHhcCCcccCC---
Confidence 999999999999999999999999882 23 799999999998876
Q ss_pred cccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCC---ccHHHHHHHHHHHc-CCCCCCccEEEec
Q 013344 269 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG---VGPAVAIPAAVKSA-GLQLDDIDLFEIN 344 (445)
Q Consensus 269 ~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~---~~~~~ai~~aL~~a-Gl~~~DID~~e~h 344 (445)
+|..+||+++|||+|+||++++.|++++.++ .++.+++... ++..+. ..+..+++++++++ |++++|||++|+|
T Consensus 196 L~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~-~~~~~~~~d~~~~~~~~~a~~~aAgi~~~diD~~Ei~ 273 (352)
T PRK07937 196 LRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRI-ESPSLGARDLTRSPSTALAAEAATGGDAGGVDVAELH 273 (352)
T ss_pred chhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEee-CCccccccccccHHHHHHHHHHhcCCCHHHCCEEEEe
Confidence 9999999999999999999999999998877 6888887753 322222 33456677788885 9999999999999
Q ss_pred CCChHHHHHHHHHcCCCC-CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeec
Q 013344 345 EAFASQFVYCRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIG 410 (445)
Q Consensus 345 ~~~~~~~~~~~e~LGl~~-~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G 410 (445)
|+|+.+.+.++|.|||+. .|+|++||+|+ |||+|+||++++.++++||++++. ++++++...|
T Consensus 274 D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~-ghp~gatG~~~~~e~~~QL~g~~a--~~~l~~~~Gg 337 (352)
T PRK07937 274 APFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAGLERIGEAARHIWDGSA--RRALAHATSG 337 (352)
T ss_pred CCChHHHHHHHHHcCCCCCCCcCCCccchh-cCchhHHHHHHHHHHHHHHhccCC--CEEEEecccc
Confidence 999999999999999976 59999999999 999999999999999999998865 8888876443
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=345.41 Aligned_cols=319 Identities=17% Similarity=0.154 Sum_probs=251.7
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~ 129 (445)
++|+|||++.|+|+|+ .+.+..+|+.+|+++||+|+||+++|||.+++++. .. .+...++..+|++...
T Consensus 4 ~~v~IvG~g~t~~~r~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~--~~----~~~~~l~~~lGl~~~~ 72 (386)
T PRK07855 4 GKAAIVGIGATEFSKN-----SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM--DT----NPEIAVARALGIGELK 72 (386)
T ss_pred CCEEEEEeeecccccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC--cc----ccHHHHHHHCCCCCCc
Confidence 5799999999999874 36788999999999999999999999999987443 12 1224466789995324
Q ss_pred ceEEecCcCcHHHHHHHHHHHHHHcCCCCeE----ecCc----cchh----------h----h--hhhccc-c---chhH
Q 013344 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIG----SVNP----KVKA----------F----E--QAQNCL-L---PMGV 181 (445)
Q Consensus 130 ~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v----~~~~----~~~~----------~----~--~~~~~~-~---~mg~ 181 (445)
+...++.+|+|+..++..|++.|++|.+|++ .+.. .... . . ..+... . .+++
T Consensus 73 ~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al 152 (386)
T PRK07855 73 FFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPAAWVAM 152 (386)
T ss_pred ceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChHHHHHH
Confidence 5668999999999999999999999999999 1110 0000 0 0 001111 1 2677
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
.+++|+++||.++|++..+++++|++|.+||+|.++ ++++|+|+++++++
T Consensus 153 ~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~------------------------------~~~~t~e~vl~s~~ 202 (386)
T PRK07855 153 LARRYMHEYGATSEDFGRVAVADRKHAATNPKAWFY------------------------------GRPITLEDHQNSRW 202 (386)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhhhc------------------------------CCCCCHHHHhcCCc
Confidence 799999999999999999999999999999988321 23589999999999
Q ss_pred cccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCC----------CC-cc-HHHHHHHHHH
Q 013344 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI----------MG-VG-PAVAIPAAVK 329 (445)
Q Consensus 262 ~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~----------~~-~~-~~~ai~~aL~ 329 (445)
+.+| +|..+||+++|||+|+||++++.|++++.++. ++.+++... ++.. +. .. ...+++++|+
T Consensus 203 Ia~P---l~~~d~~~~sDGAaAvvl~see~A~~l~~~pv-~I~g~~~~~-~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~ 277 (386)
T PRK07855 203 IAEP---LRLLDCCQESDGAVALVVTSAERARDLKQRPA-VIKAAAQGS-GADQYMMTSYYRDDITGLPEMGLVARQLWA 277 (386)
T ss_pred ccCC---chhhhcCCcCCceEEEEEecHHHHhhCCCCCE-EEEEEEEec-CCccccccccccccccccchHHHHHHHHHH
Confidence 8865 99999999999999999999999999987775 788877632 2211 11 11 2369999999
Q ss_pred HcCCCCCCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHHHHH
Q 013344 330 SAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLH 391 (445)
Q Consensus 330 ~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~ 391 (445)
++||+++|||++|+||+|+.+.+.++|.|||+++ |+|++||.++.|||. |+.++.|+++
T Consensus 278 ~AGi~~~DiDv~El~D~Ft~~~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~ 354 (386)
T PRK07855 278 QSGLGPADIDTAILYDHFTPFVLMQLEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVR 354 (386)
T ss_pred HcCCCHHHCcEEEeccCCcHHHHHHHHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHHH
Confidence 9999999999999999999999999999999974 899999999999987 8889999999
Q ss_pred HHHhcCCC----CceeeEEEeecccceeEEE
Q 013344 392 EMKRRGRD----CRFGVISMCIGTGMGAAAV 418 (445)
Q Consensus 392 ~L~~~~~~----~~~G~~~~~~G~G~~~a~~ 418 (445)
||+++++. ++.|+++. .|+.++.+++
T Consensus 355 QLrG~a~~QV~~a~~gl~~~-~Gg~~~~~~~ 384 (386)
T PRK07855 355 QLRGTSVNQVPGVENVLVTA-GTGVPTSGLI 384 (386)
T ss_pred HHhCCCcccCCCCcEEEEEC-CCCccceeEE
Confidence 99976531 35666664 3333444444
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=331.40 Aligned_cols=332 Identities=20% Similarity=0.184 Sum_probs=252.7
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCC--CCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVD--PSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~--~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
+.++|||+++|+|++...+ ...++.+|+.+|+++||+|+|++ +++||.+++++..... ..++...++..+|+..
T Consensus 4 ~~~~IVGvG~t~~~~~~~~--~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~--~~~~~~~la~~lGl~p 79 (498)
T PRK08257 4 RTPVIVGVGQVTERPDDPA--YGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWR--YRDPPGLLAERLGADP 79 (498)
T ss_pred CcEEEEEeeecccccCCcc--cCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEecccccc--ccCHHHHHHHHcCCCC
Confidence 6799999999999864210 11378999999999999999999 9999999988764322 2245677788999953
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCcc--ch------hhhh---------------------h
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNPK--VK------AFEQ---------------------A 172 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~~--~~------~~~~---------------------~ 172 (445)
.+......+|+++..++..|+..|++|.+|++ + +... +. .|.. .
T Consensus 80 -~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (498)
T PRK08257 80 -ARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAEL 158 (498)
T ss_pred -cceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhh
Confidence 45555667888999999999999999999999 1 1110 00 0100 0
Q ss_pred hcc-c---cchhHhHHHHHHHhCCCHHHH-HHHH---HHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccC
Q 013344 173 QNC-L---LPMGVTSENVAHRFGVTRKEQ-DQAA---VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 244 (445)
Q Consensus 173 ~~~-~---~~mg~~ae~~a~~~gisre~~-d~~a---~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d 244 (445)
... . ..+++.+.+|+++||.|+|++ +.++ ++++++|.+||+| +|
T Consensus 159 ~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A-~~--------------------------- 210 (498)
T PRK08257 159 RHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHA-WI--------------------------- 210 (498)
T ss_pred hcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHH-hh---------------------------
Confidence 000 1 125677899999999999983 3343 4799999999988 22
Q ss_pred CCCCCCCCHHHHh----cCCCcccCCCccccCCCCC-CCCCCeeEEeeCHHHHHhcCCCe--eEEEEEeEEeecCC----
Q 013344 245 DGIRPNTSVSELA----KLKPVFKKDGTTTAGNSSQ-VSDGAGAVLLMKRSVAMRKGLPI--LGVFRTFAAVGVDP---- 313 (445)
Q Consensus 245 ~~~r~~~t~e~l~----~~~p~~~~~G~~t~~~~~~-~~DGAaAvvL~s~~~a~~~g~~~--~~~i~~~~~~~~~p---- 313 (445)
|+++|+|+++ +.+++.+| +|..+||+ .+|||+|+||++++.|++++.+. ..++.+++....+.
T Consensus 211 ---r~~~t~eevl~~~~~~rmIa~P---l~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~ 284 (498)
T PRK08257 211 ---PRERSAEEIVTPTPDNRMIAWP---YTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILE 284 (498)
T ss_pred ---CCCCCHHHHhcccCCCCeeeCC---ccHhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCcccccc
Confidence 3357889888 56777655 89999996 89999999999999999998431 23556666543211
Q ss_pred -CCCCccH--HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCC---CcCCCCChhcccChhhhHHHHHHH
Q 013344 314 -AIMGVGP--AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE---KINVNGGALAIGHPLGTTGARCVA 387 (445)
Q Consensus 314 -~~~~~~~--~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~---~vn~~gG~la~Gh~~GatG~~~i~ 387 (445)
..+...+ ..+++++|+++|++++|||++|+||+|+...+..+|.|||+++ ++|++||++++|||.|++|+.++.
T Consensus 285 r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~ 364 (498)
T PRK08257 285 RPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIA 364 (498)
T ss_pred ccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHH
Confidence 1122233 3699999999999999999999999999999999999999988 999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceeeEEEeecccce-eEEEEEEc
Q 013344 388 TLLHEMKRRGRDCRFGVISMCIGTGMG-AAAVFERG 422 (445)
Q Consensus 388 ~~l~~L~~~~~~~~~G~~~~~~G~G~~-~a~~l~~~ 422 (445)
++++||++++. +.|+++...|.+.. ...++.++
T Consensus 365 E~v~QLRg~~~--~~gLv~~~GG~~~~~~~~vl~~~ 398 (498)
T PRK08257 365 EMVERLRANPG--RRGLVTANGGYLTKHSVGVYSTE 398 (498)
T ss_pred HHHHHHhhcCC--CEEEEECCCChhhceEEEEEeCC
Confidence 99999998876 88888764333322 33444444
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=308.56 Aligned_cols=308 Identities=22% Similarity=0.325 Sum_probs=253.6
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~ 129 (445)
-+|||||+++|.|.+. |...+....||+.+|...||+|++|..++|+.-++|.+.++.. .+..+...+|+. .+
T Consensus 6 ~rvyvvgvgmtkf~kp--g~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdst----cgqraiyevgmt-gi 78 (408)
T KOG1406|consen 6 PRVYVVGVGMTKFEKP--GRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDST----CGQRAIYEVGMT-GI 78 (408)
T ss_pred ceEEEEecceeeecCC--CcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCc----cchHHHHhcccc-Cc
Confidence 4899999999999985 5777888899999999999999999999999999999987764 454555689994 79
Q ss_pred ceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC-----ccchhh--hhh---------------hccccchhH
Q 013344 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN-----PKVKAF--EQA---------------QNCLLPMGV 181 (445)
Q Consensus 130 ~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~-----~~~~~~--~~~---------------~~~~~~mg~ 181 (445)
|.+.||+.|++|..+|.+|.+.|++|..|+| .+. ..+.+. +.+ +-....+|.
T Consensus 79 pi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmfgn 158 (408)
T KOG1406|consen 79 PIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMFGN 158 (408)
T ss_pred ceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHhhh
Confidence 9999999999999999999999999999999 111 111110 000 001123567
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
.....|++||-.+|++..++.++|.+...||+. +++..+++|++.+++-
T Consensus 159 agkehmekygtk~ehfakiawknhkhsvnnpys-------------------------------qf~deysldqvm~s~~ 207 (408)
T KOG1406|consen 159 AGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYS-------------------------------QFRDEYSLDQVMKSPQ 207 (408)
T ss_pred hHHHHHHHhCCCHHHHhHhhhhccccccCChhH-------------------------------hhhhhccHHHHhcchH
Confidence 788899999999999999999998887777765 2344689999999988
Q ss_pred cccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeE-EEEEeEEeecCCCCC---------Ccc-HHHHHHHHHHH
Q 013344 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILG-VFRTFAAVGVDPAIM---------GVG-PAVAIPAAVKS 330 (445)
Q Consensus 262 ~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~-~i~~~~~~~~~p~~~---------~~~-~~~ai~~aL~~ 330 (445)
+|+ ++|...||+.+||++|.||.++.+.++++++-.+ +|++.-....+|..+ |.. ...+.++++++
T Consensus 208 v~d---flt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~ak 284 (408)
T KOG1406|consen 208 VVD---FLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAK 284 (408)
T ss_pred HHH---HHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHH
Confidence 885 6899999999999999999999999999876432 344554444444322 222 24789999999
Q ss_pred cCCCCCCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCChhcccChhhhHHHHHHHHHHHH
Q 013344 331 AGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHE 392 (445)
Q Consensus 331 aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~------------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~ 392 (445)
+|++|.||+++|+||+|+..++...|+||||++ .+||+||+|+.|||+|+||.+|..++.+|
T Consensus 285 sgltpndvqvielhdcfs~nelityealglcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwq 364 (408)
T KOG1406|consen 285 SGLTPNDVQVIELHDCFSANELITYEALGLCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQ 364 (408)
T ss_pred cCCCcccceEEEeecccchhhhhhHHHhcCCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHH
Confidence 999999999999999999999999999999986 68999999999999999999999999999
Q ss_pred HHhcCC
Q 013344 393 MKRRGR 398 (445)
Q Consensus 393 L~~~~~ 398 (445)
||+..+
T Consensus 365 lrg~ag 370 (408)
T KOG1406|consen 365 LRGLAG 370 (408)
T ss_pred Hhhhhc
Confidence 998765
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=264.81 Aligned_cols=260 Identities=24% Similarity=0.298 Sum_probs=200.0
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
.++.||. .||++.+|+. +..+++..+|+.+|+++||+++|++|+|||.||+.+.+|++. -+..+..++..||+. +
T Consensus 29 tsdewI~--~rtGir~R~~-a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~-~Ps~A~~vq~~LG~~-~ 103 (323)
T COG0332 29 TSDEWIE--TRTGIRERRI-AADDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHL-FPSTACLVQARLGLG-G 103 (323)
T ss_pred CCcceee--eecCCceeee-cCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccC-CChHHHHHHHHhCCC-C
Confidence 3789999 7999998775 445899999999999999999999999999999999999987 444556666799996 5
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHH
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVD 203 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~ 203 (445)
+++|+++.+|+|+++||..|..+|++|.++++ +..+++.+|.++..
T Consensus 104 ~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ld~~dR~t----------------------------- 154 (323)
T COG0332 104 APAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILDWTDRDT----------------------------- 154 (323)
T ss_pred cceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccCCHhhccc-----------------------------
Confidence 99999999999999999999999999999877 22223333222222
Q ss_pred HHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCee
Q 013344 204 SHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283 (445)
Q Consensus 204 s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaA 283 (445)
+..++|||+|
T Consensus 155 ----------------------------------------------------------------------~vlFgDGAgA 164 (323)
T COG0332 155 ----------------------------------------------------------------------CVLFGDGAGA 164 (323)
T ss_pred ----------------------------------------------------------------------eEEEcCCceE
Confidence 2236777777
Q ss_pred EEeeCHHHHHhcCCCeeEEEEEeEEe--------e---cCC---C----CC-C-----c---cHHHHHHHHHHHcCCCCC
Q 013344 284 VLLMKRSVAMRKGLPILGVFRTFAAV--------G---VDP---A----IM-G-----V---GPAVAIPAAVKSAGLQLD 336 (445)
Q Consensus 284 vvL~s~~~a~~~g~~~~~~i~~~~~~--------~---~~p---~----~~-~-----~---~~~~ai~~aL~~aGl~~~ 336 (445)
+||...+ .+.++.- .....-+.. + ..+ . .| | . ....+++++|+++|++++
T Consensus 165 vvl~~~~--~~~~i~~-~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~ 241 (323)
T COG0332 165 VVLEATE--DDNGILD-TDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPE 241 (323)
T ss_pred EEEecCC--CCcCeee-eeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 7776654 1111100 000000000 0 000 0 01 1 0 123799999999999999
Q ss_pred CccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEE-Ee-ecccce
Q 013344 337 DIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS-MC-IGTGMG 414 (445)
Q Consensus 337 DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~-~~-~G~G~~ 414 (445)
|||+|.+||++..+...+.++||++++|+..+. +.||||++++++.+|.++.+++.+ |.|+.+ ++ +|+|++
T Consensus 242 dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~~------~~yGNtsaAsiplaL~~~~~~g~i-k~Gd~ill~~fG~Glt 314 (323)
T COG0332 242 DIDWFVPHQANLRIIEAIAKKLGIPEEKVVVTV------DKYGNTSAASIPLALDEALREGRI-KPGDLVLLEAFGGGLT 314 (323)
T ss_pred HCCEEccccccHHHHHHHHHHcCCCHHHHhhHH------HHhcccccchHHHHHHHHhhhCCC-CCCCEEEEEeecCcce
Confidence 999999999999999999999999999999998 999999999999999999988887 888543 33 999999
Q ss_pred eEEEEEEc
Q 013344 415 AAAVFERG 422 (445)
Q Consensus 415 ~a~~l~~~ 422 (445)
|+++++|+
T Consensus 315 wg~~~~r~ 322 (323)
T COG0332 315 WGAALVRW 322 (323)
T ss_pred eeeEEEEe
Confidence 99999986
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-29 Score=210.10 Aligned_cols=123 Identities=53% Similarity=0.895 Sum_probs=109.8
Q ss_pred CCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccC
Q 013344 297 LPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 376 (445)
Q Consensus 297 ~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh 376 (445)
++|++++++++..+++|..|+.+|..|++++|+++|++++|||+||+||+|+.+.+.+++.||++++++|++||+|++||
T Consensus 1 l~pla~i~~~~~~~~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la~GH 80 (123)
T PF02803_consen 1 LKPLARIVGYASAGVDPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALALGH 80 (123)
T ss_dssp --ESEEEEEEEEEE--GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHHH-B
T ss_pred CCeEEEEEEEEEEecCHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHHhhccccccccccCcccccccccc
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 377 PLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 377 ~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
|+|+||++++.+++++|+++++ ++|+.++|.|+|++.+++|+|
T Consensus 81 P~gasG~r~~~~l~~~L~~~~~--~~gla~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 81 PLGASGARLVVELAHQLRRRGG--RYGLAAICAGGGQGSAVLLER 123 (123)
T ss_dssp HTTTHHHHHHHHHHHHHHHHTT--SEEEEEEEETTTEEEEEEEEE
T ss_pred cccccccchhhhhHHHHHHhch--hhhhHHhcccceeeEEEEEEC
Confidence 9999999999999999999988 999999999999999999987
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-26 Score=218.85 Aligned_cols=235 Identities=26% Similarity=0.325 Sum_probs=192.2
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I 152 (445)
.+..+|+.+|++++|+++|++++|||.|++++++++.. .+..+..++..+|++ +.+.++++.+|+|++.||..|.++|
T Consensus 5 ~~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~-~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i 82 (254)
T cd00327 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGE-FSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQV 82 (254)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCcc-ccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHH
Confidence 34889999999999999999999999999999988764 456677888899997 7999999999999999999999999
Q ss_pred HcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCC
Q 013344 153 KAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPK 232 (445)
Q Consensus 153 ~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~ 232 (445)
++|+++.+
T Consensus 83 ~~g~~~~~------------------------------------------------------------------------ 90 (254)
T cd00327 83 QNGKADIV------------------------------------------------------------------------ 90 (254)
T ss_pred HCCCCCEE------------------------------------------------------------------------
Confidence 99987654
Q ss_pred CCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecC
Q 013344 233 TGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD 312 (445)
Q Consensus 233 ~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~ 312 (445)
+++..|. +.++|||+|+||.+++.+++.+.++++++.++.....+
T Consensus 91 ------lv~~~e~-----------------------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~ 135 (254)
T cd00327 91 ------LAGGSEE-----------------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDG 135 (254)
T ss_pred ------EEEecce-----------------------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCC
Confidence 1122211 23789999999999999988888888888887765433
Q ss_pred CC----CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCc---CCCCChhcccChhhhHHHHH
Q 013344 313 PA----IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKI---NVNGGALAIGHPLGTTGARC 385 (445)
Q Consensus 313 p~----~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~v---n~~gG~la~Gh~~GatG~~~ 385 (445)
+. .....+.++++++|+++|++++|||+|++|+++..+...+.+.+++++++. |+.++...+||+.++++...
T Consensus 136 ~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~ 215 (254)
T cd00327 136 ASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAI 215 (254)
T ss_pred CCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHH
Confidence 32 234456789999999999999999999999999999999999999887655 67888899999999999999
Q ss_pred HHHHHHHHHhc-------CCCCceeeEEEeecccceeEEEE
Q 013344 386 VATLLHEMKRR-------GRDCRFGVISMCIGTGMGAAAVF 419 (445)
Q Consensus 386 i~~~l~~L~~~-------~~~~~~G~~~~~~G~G~~~a~~l 419 (445)
+..++.+++.+ .+ +..+... +|.|.+++.++
T Consensus 216 l~~~~~~~~~~~~~~~~~~~--~~~l~~~-~g~Gg~~~~~~ 253 (254)
T cd00327 216 LDELLLMLEHEFIPPTPREP--RTVLLLG-FGLGGTNAAVV 253 (254)
T ss_pred HHHHHHHHhCCCcCCCCCCc--CEEEEee-EcCCCcceEEE
Confidence 99999998875 22 4444444 56665554443
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-26 Score=227.80 Aligned_cols=261 Identities=20% Similarity=0.227 Sum_probs=189.9
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+.+|. .+|++.+|+ ...++++..+|+.+|+++||+++|++|++||.|++++++++.. ..++..++..+|+. +.+
T Consensus 30 ~~~i~--~~~gi~~r~-~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~--~~~~~~v~~~Lg~~-~~~ 103 (326)
T CHL00203 30 DHWIS--TRTGIKKRH-LAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDL--FGSASQLQAEIGAT-RAV 103 (326)
T ss_pred hhhEe--eccCeEEEE-eCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC--CchHHHHHHHhCCC-CCc
Confidence 45666 799999865 4778899999999999999999999999999999999887654 22455566789996 588
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~ 210 (445)
+++++++|+|++.+|..|.++|++|.++++.+
T Consensus 104 ~~~v~~~Casg~~al~~A~~~i~sg~~~~~Lv------------------------------------------------ 135 (326)
T CHL00203 104 AFDITAACSGFILALVTATQFIQNGSYKNILV------------------------------------------------ 135 (326)
T ss_pred eeeecccchhHHHHHHHHHHHHHcCCCCEEEE------------------------------------------------
Confidence 99999999999999999999999999877611
Q ss_pred HHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHH
Q 013344 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRS 290 (445)
Q Consensus 211 a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~ 290 (445)
+..|. .. ..++++. ..+...++|||+|+||.+.+
T Consensus 136 ------------------------------v~~e~-~s------------~~~~~~~---~~~~~~fgDga~A~ll~~~~ 169 (326)
T CHL00203 136 ------------------------------VGADT-LS------------KWIDWSD---RKTCILFGDGAGAAIIGASY 169 (326)
T ss_pred ------------------------------EEehh-hh------------CcCCccc---CCceEEEcceeeEEEEEEcC
Confidence 00000 00 0000000 00122379999999998643
Q ss_pred HHHhcCCCeeEEEE---E-----eEEee------------cCCCCC------C-----c---cHHHHHHHHHHHcCCCCC
Q 013344 291 VAMRKGLPILGVFR---T-----FAAVG------------VDPAIM------G-----V---GPAVAIPAAVKSAGLQLD 336 (445)
Q Consensus 291 ~a~~~g~~~~~~i~---~-----~~~~~------------~~p~~~------~-----~---~~~~ai~~aL~~aGl~~~ 336 (445)
. .+ +.+... + +.... .++... + . ....+++++|+++|++++
T Consensus 170 ~---~~--~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~~ 244 (326)
T CHL00203 170 E---NS--ILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALNISID 244 (326)
T ss_pred C---CC--eEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 2 01 111000 0 00000 000000 0 0 012578999999999999
Q ss_pred CccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccce
Q 013344 337 DIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMG 414 (445)
Q Consensus 337 DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~ 414 (445)
|||+|.+||.+..+...+.+.||++++++..+. +.+||||+++++.+|+++.+++.. +.|+.+++ +|+|++
T Consensus 245 did~~~~hq~~~~~~~~~~~~lgl~~~k~~~~l------~~~Gn~~sasi~~~L~~~~~~g~~-~~Gd~vll~~~G~G~s 317 (326)
T CHL00203 245 EVDWFILHQANKRILEAIANRLSVPNSKMITNL------EKYGNTSAASIPLALDEAIQNNKI-QPGQIIVLSGFGAGLT 317 (326)
T ss_pred HCCEEEECCCCHHHHHHHHHHhCCCHHHhhhHH------HhhCcHHHHHHHHHHHHHHHhCCC-CCCCEEEEEEEchhhh
Confidence 999999999999999999999999999987655 899999999999999999877665 67765544 889999
Q ss_pred eEEEEEEcc
Q 013344 415 AAAVFERGD 423 (445)
Q Consensus 415 ~a~~l~~~~ 423 (445)
+++++++++
T Consensus 318 ~~~~v~~~~ 326 (326)
T CHL00203 318 WGAIVLKWK 326 (326)
T ss_pred heEEEEEeC
Confidence 999988874
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-26 Score=227.06 Aligned_cols=255 Identities=14% Similarity=0.122 Sum_probs=185.2
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcC
Q 013344 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (445)
Q Consensus 59 rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~C 138 (445)
.|++.+|+. ...++++.+|+.+|+++||+++|++++|||.||++++++++. .+..+..++..||++.++++++++.+|
T Consensus 45 ~~Gi~~R~~-~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~-~P~~a~~v~~~Lg~~~~~~~~di~~~C 122 (353)
T PRK12880 45 VIGLNTRYI-CDENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFF-MPSTACYLHQLLNLSSKTIAFDLGQAC 122 (353)
T ss_pred ccCceEEEe-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCCCCceEEehhhhh
Confidence 478877654 446789999999999999999999999999999999999886 555666777799997678999999999
Q ss_pred cHHHHHHHHHHHHHHcCCCCeE-ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 139 SSGLQAVADVAAAIKAGFYDIG-SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 139 sSgl~Al~~A~~~I~sG~~~~v-~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
++++++|..|..+|++|..+ + -+.. |....
T Consensus 123 ~g~~~aL~~A~~~i~~~~~~-~LVv~~---------------------------------e~~S~--------------- 153 (353)
T PRK12880 123 AGYLYGLFVAHSLIQSGLGK-ILLICG---------------------------------DTLSK--------------- 153 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCC-EEEEEe---------------------------------hhhhc---------------
Confidence 99999999999999999876 4 1100 00000
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
.+..++ + .. ...++|||+|+||...+... +
T Consensus 154 ----------------------~~~~~d--~---------~~--------------~~lFGDGAaA~vl~~~~~~~--~- 183 (353)
T PRK12880 154 ----------------------FIHPKN--M---------NL--------------APIFGDGVSATLIEKTDFNE--A- 183 (353)
T ss_pred ----------------------cCCccc--C---------Cc--------------eeeecccceEEEEEecCCCC--c-
Confidence 000000 0 01 12368999999997533210 0
Q ss_pred CeeEEEEEeEE----eecC------CC---------------------CC-Ccc--------HHHHHHHHHHHcCCCCCC
Q 013344 298 PILGVFRTFAA----VGVD------PA---------------------IM-GVG--------PAVAIPAAVKSAGLQLDD 337 (445)
Q Consensus 298 ~~~~~i~~~~~----~~~~------p~---------------------~~-~~~--------~~~ai~~aL~~aGl~~~D 337 (445)
.. .+...+. ...+ |. .| +.. ...+++++|+++|++++|
T Consensus 184 -~~-~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~d 261 (353)
T PRK12880 184 -FF-ELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDEKD 261 (353)
T ss_pred -eE-EEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 00 1110000 0000 00 00 111 126889999999999999
Q ss_pred ccEEEecCCChHHHHHHHHHcCCCCCCcCC-CCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeE
Q 013344 338 IDLFEINEAFASQFVYCRNKLGLDPEKINV-NGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA 416 (445)
Q Consensus 338 ID~~e~h~~~~~~~~~~~e~LGl~~~~vn~-~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a 416 (445)
||+|.+||++..+...+.++||++++++.. .. ..+||||+++++.+|+++.++++. + +....+|+|++|+
T Consensus 262 id~~v~HQ~~~~i~~~i~~~Lgl~~ek~~~~~l------~~~GNtssasip~~L~~~~~~~~~-~--~ll~~~G~G~s~g 332 (353)
T PRK12880 262 IAFHLFHQSNAYLVDCIKEELKLNDDKVPNFIM------EKYANLSACSLPALLCELDTPKEF-K--ASLSAFGAGLSWG 332 (353)
T ss_pred CCEEEECCCCHHHHHHHHHHhCCCHHHhhhhhH------HhhCCHHHHHHHHHHHHHHHcCCc-E--EEEEEEchhhhhe
Confidence 999999999999999999999999999852 23 789999999999999999876653 3 3333389999999
Q ss_pred EEEEEcccc
Q 013344 417 AVFERGDCA 425 (445)
Q Consensus 417 ~~l~~~~~~ 425 (445)
.++++++.+
T Consensus 333 ~~ll~~~~~ 341 (353)
T PRK12880 333 SAVLNFKDL 341 (353)
T ss_pred EeEEEECCc
Confidence 999999665
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=6e-25 Score=220.52 Aligned_cols=267 Identities=18% Similarity=0.184 Sum_probs=188.3
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
..|++.+|+. ...++++.+|+.+|+++||+++|+++++||.|+++++++++. .+..+..++..+|++.++++++|+.+
T Consensus 45 ~~~Gi~~R~~-~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~-~p~~a~~v~~~lgl~~~~~~~~v~~~ 122 (338)
T PRK09258 45 ALTGIRERRW-WPEGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYL-EPATACRVHHNLGLPKSCANFDVSNA 122 (338)
T ss_pred hhcCceeEec-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHcCCCCCCceeehhhh
Confidence 3577876653 335788999999999999999999999999999999887775 45667778889999766899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEec-----CccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSV-----NPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 212 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~-----~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~ 212 (445)
|+|++.||..|.++|++|.++++.+ .+.+.+ +++ +
T Consensus 123 C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~~---------------------~~~-----~-------------- 162 (338)
T PRK09258 123 CLGFLNGMLDAANMIELGQIDYALVVSGESAREIVE---------------------ATI-----D-------------- 162 (338)
T ss_pred hHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhcc---------------------chh-----h--------------
Confidence 9999999999999999999887711 110000 000 0
Q ss_pred HcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHH
Q 013344 213 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVA 292 (445)
Q Consensus 213 ~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a 292 (445)
.+..+. .+.+ + | ........++|||+|+||.+.+..
T Consensus 163 ---------------------------~~~~~~-----~~~~------~-~-----~~~~~~~~~GDGA~A~ll~~~~~~ 198 (338)
T PRK09258 163 ---------------------------RLLAPE-----TTRE------D-F-----AQSFATLTLGSGAAAAVLTRGSLH 198 (338)
T ss_pred ---------------------------hhccCc-----cchh------h-h-----hhccceEEecccceEEEEecCCCC
Confidence 000000 0000 0 0 001112237999999999875421
Q ss_pred HhcCCCeeEEEEEeEEee---------cCCCCCC-c----------cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHH
Q 013344 293 MRKGLPILGVFRTFAAVG---------VDPAIMG-V----------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 352 (445)
Q Consensus 293 ~~~g~~~~~~i~~~~~~~---------~~p~~~~-~----------~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~ 352 (445)
..+. ++.+..... .....+. . ....+++++|+++|++++|||+|.+|+.+..+..
T Consensus 199 -~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~~~~~~ 273 (338)
T PRK09258 199 -PRGH----RLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVGAAHTR 273 (338)
T ss_pred -CCcc----eeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCCHHHHH
Confidence 1111 122211100 0000000 0 1125888999999999999999999999999999
Q ss_pred HHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 353 YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 353 ~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
.+.+.||++++++..+. ..+||+|+++++.+|+++.+++.. +.|..+++ +|+|++++++++++
T Consensus 274 ~~~~~lgl~~~k~~~~~------~~~GN~~sas~~~~L~~~~~~g~~-~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 274 AILKALGIDPEKVFTTF------PTLGNMGPASLPITLAMAAEEGFL-KPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred HHHHHhCCCHHHceehH------hhhCCcHHhHHHHHHHHHHHhCCC-CCCCEEEEEEechhHhhHhHeeeC
Confidence 99999999999987765 789999999999999999877654 66664443 88898888877764
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-25 Score=223.43 Aligned_cols=257 Identities=23% Similarity=0.285 Sum_probs=185.2
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|+|.+|+. ..+++++.+|+.+|+++||+++|++++|||.|++++++++.. ...+..++..||++ ++++++++.+
T Consensus 80 ~~tGi~~R~~-~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~--~~~a~~v~~~LG~~-~~~~~dv~~~ 155 (379)
T PLN02326 80 TRTGIRNRRV-LSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDL--FGSAPQVQAALGCT-NALAFDLTAA 155 (379)
T ss_pred cccCcceEee-cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcc--CcHHHHHHHHhCCC-CCceeecccc
Confidence 5788887643 567889999999999999999999999999999999877654 23456677799996 6899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|.++|++|.++++.+
T Consensus 156 Ca~~~~aL~~A~~~l~~g~~~~vLV------------------------------------------------------- 180 (379)
T PLN02326 156 CSGFVLGLVTAARFIRGGGYKNVLV------------------------------------------------------- 180 (379)
T ss_pred chHHHHHHHHHHHHHHcCCCCEEEE-------------------------------------------------------
Confidence 9999999999999999998876611
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
+..|. ... .++++ ...+...++|||+|+||.+.+..+. +
T Consensus 181 -----------------------v~~e~-~s~------------~~~~~---d~~~~~lfGDGAaAvlL~~~~~~~~-~- 219 (379)
T PLN02326 181 -----------------------IGADA-LSR------------YVDWT---DRGTCILFGDGAGAVVLQACDDDED-G- 219 (379)
T ss_pred -----------------------EEech-hcC------------CCCcc---ccCceEEEcceeEEEEEEEcCCCCC-c-
Confidence 00000 000 00000 0011223789999999987542110 1
Q ss_pred CeeEE-EEEeE-----E----eec---------------CC---CC--C---Ccc--------HHHHHHHHHHHcCCCCC
Q 013344 298 PILGV-FRTFA-----A----VGV---------------DP---AI--M---GVG--------PAVAIPAAVKSAGLQLD 336 (445)
Q Consensus 298 ~~~~~-i~~~~-----~----~~~---------------~p---~~--~---~~~--------~~~ai~~aL~~aGl~~~ 336 (445)
+... +...+ . .+. ++ .. + +.. ...+++++|+++|++++
T Consensus 220 -i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~ 298 (379)
T PLN02326 220 -LLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTAE 298 (379)
T ss_pred -eEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 1110 00000 0 000 00 00 0 000 12578899999999999
Q ss_pred CccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccce
Q 013344 337 DIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMG 414 (445)
Q Consensus 337 DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~ 414 (445)
|||+|.+|+.+..+...+.+.||++++++..+. ..+||||+++++.+|+++.+++.. +.|+.+++ +|+|++
T Consensus 299 dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~l------~~~GNt~sAsi~~~L~~~~~~g~~-~~Gd~vll~~~G~G~t 371 (379)
T PLN02326 299 SIDWLLLHQANQRIIDAVAQRLGIPPEKVISNL------ANYGNTSAASIPLALDEAVRSGKV-KKGDVIATAGFGAGLT 371 (379)
T ss_pred HCCEEEECCCCHHHHHHHHHHcCCCHHHeeecH------hhcCcHHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEChhhe
Confidence 999999999999999999999999999987664 789999999999999999887665 67765443 899999
Q ss_pred eEEEEEEc
Q 013344 415 AAAVFERG 422 (445)
Q Consensus 415 ~a~~l~~~ 422 (445)
++.+++++
T Consensus 372 ~~~~ll~~ 379 (379)
T PLN02326 372 WGSAIVRW 379 (379)
T ss_pred eeEEEEEC
Confidence 98888764
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-24 Score=213.37 Aligned_cols=256 Identities=19% Similarity=0.195 Sum_probs=185.8
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC-CCceEEecC
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE-TVPVRTVNR 136 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~-~~~~~~v~~ 136 (445)
.+|++.+|+. ..++++.+|+.+|+++||+++|++|+|||.+++++.+++.. .+..+..++..+|++. .+++++++.
T Consensus 37 ~~~Gi~~R~~--~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~-~p~~a~~v~~~lgl~~~~~~~~~v~~ 113 (329)
T PRK07204 37 KKSGVKTRHF--VDGETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQA-IPCTASLIQEQLGLQHSGIPCFDINS 113 (329)
T ss_pred hccCceEEee--cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CccHHHHHHHHhCCCCCCceEEEccc
Confidence 4788877653 23788999999999999999999999999999999887664 3455677777899964 379999999
Q ss_pred cCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 013344 137 QCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 216 (445)
Q Consensus 137 ~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~ 216 (445)
+|+|++.||..|.++|++|.++.+.
T Consensus 114 ~C~~~~~al~~a~~~l~~g~~~~~L------------------------------------------------------- 138 (329)
T PRK07204 114 TCLSFITALDTISYAIECGRYKRVL------------------------------------------------------- 138 (329)
T ss_pred hhHHHHHHHHHHHHHHHCCCCCEEE-------------------------------------------------------
Confidence 9999999999999999999887651
Q ss_pred cccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcC
Q 013344 217 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 296 (445)
Q Consensus 217 ~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g 296 (445)
++..|- ....+ ++ . ...+...++|||+|+||.+.+. .
T Consensus 139 -----------------------vv~~e~-~s~~~--------~~--~-----~~~~~~lfGDGAaA~ll~~~~~----~ 175 (329)
T PRK07204 139 -----------------------IISSEI-SSVGL--------NW--G-----QNESCILFGDGAAAVVITKGDH----S 175 (329)
T ss_pred -----------------------EEEecc-ccCCC--------Cc--c-----cCcceEEEecccEEEEEEEcCC----C
Confidence 111110 00000 00 0 0011233799999999987542 1
Q ss_pred CCeeEEEE-------------EeEEeecCCCC------------C-Ccc--------HHHHHHHHHHHcCCCCCCccEEE
Q 013344 297 LPILGVFR-------------TFAAVGVDPAI------------M-GVG--------PAVAIPAAVKSAGLQLDDIDLFE 342 (445)
Q Consensus 297 ~~~~~~i~-------------~~~~~~~~p~~------------~-~~~--------~~~ai~~aL~~aGl~~~DID~~e 342 (445)
.++++... +.+. ..++.. + +.. ...+++++|+++|++++|||+|.
T Consensus 176 ~~il~~~~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~ 254 (329)
T PRK07204 176 SRILASHMETYSSGAHLSEIRGGGT-MIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADIDLIV 254 (329)
T ss_pred CcEEEEEEEEecCCCCceEEecCCc-CCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 12221111 0000 001100 0 000 23789999999999999999999
Q ss_pred ecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEE
Q 013344 343 INEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFE 420 (445)
Q Consensus 343 ~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~ 420 (445)
+|+.+..+...+.+.||++++++..+. ..+||+++++++..|.++.+++.. +.|..+++ +|+|++++.+++
T Consensus 255 ~H~~~~~~~~~i~~~l~l~~e~~~~~~------~~~Gn~~sas~~~~L~~~~~~g~~-~~Gd~vll~~~G~G~s~~~~ll 327 (329)
T PRK07204 255 PHQASGPAMRLIRKKLGVDEERFVTIF------EDHGNMIAASIPVALFEAIKQKKV-QRGNKILLLGTSAGLSIGGILL 327 (329)
T ss_pred eCCCCHHHHHHHHHHcCCCHHHhhhhH------hhhCcHHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEchhhhheeeEE
Confidence 999999999999999999999987666 889999999999999999877655 66764443 899999988877
Q ss_pred Ec
Q 013344 421 RG 422 (445)
Q Consensus 421 ~~ 422 (445)
++
T Consensus 328 ~~ 329 (329)
T PRK07204 328 EY 329 (329)
T ss_pred eC
Confidence 63
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.7e-24 Score=212.40 Aligned_cols=257 Identities=19% Similarity=0.173 Sum_probs=182.9
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..+++++.+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..||++ ++++++++.+
T Consensus 36 ~~~Gi~~r~~-~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~-~p~~a~~v~~~Lg~~-~~~~~di~~~ 112 (326)
T PRK05963 36 RRTGIRCRRW-AAPDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHL-LPPSAPLLAHRLGLQ-NSGAIDLAGA 112 (326)
T ss_pred hccCCeEEEE-cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCcHHHHHHHHhCCC-CCceeeccch
Confidence 5788876553 446789999999999999999999999999999999998765 344556677799996 5889999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|+++||..|..+|++|. +.+.
T Consensus 113 C~g~~~aL~~A~~~l~~~~-~~aL-------------------------------------------------------- 135 (326)
T PRK05963 113 CAGFLYALVLADGFVRAQG-KPVL-------------------------------------------------------- 135 (326)
T ss_pred hhHHHHHHHHHHHHHHcCC-CeEE--------------------------------------------------------
Confidence 9999999999999999874 4331
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
++..|- .... ++++. ......++|||+|+||...+... .
T Consensus 136 ----------------------Vv~~d~-~s~~------------~~~~~---~~~~~lfGDgA~A~ll~~~~~~~---~ 174 (326)
T PRK05963 136 ----------------------VVAANI-LSRR------------INMAE---RASAVLFADAAGAVVLAPSAKAN---S 174 (326)
T ss_pred ----------------------EEEech-hhcc------------CCccc---cCceEEEeecceEEEEEecCCCC---C
Confidence 111110 0000 00000 00122379999999998643210 0
Q ss_pred CeeEE-EEEeE----Eeec------CC--------C-CC----Cc--------cHHHHHHHHHHHcCCCCCCccEEEecC
Q 013344 298 PILGV-FRTFA----AVGV------DP--------A-IM----GV--------GPAVAIPAAVKSAGLQLDDIDLFEINE 345 (445)
Q Consensus 298 ~~~~~-i~~~~----~~~~------~p--------~-~~----~~--------~~~~ai~~aL~~aGl~~~DID~~e~h~ 345 (445)
.++.. +...+ .... .| . .+ +. ....+++++|+++|++++|||+|.+|+
T Consensus 175 ~~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~ 254 (326)
T PRK05963 175 GVLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTPQDIDRFFPHQ 254 (326)
T ss_pred ceEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC
Confidence 11111 11100 0000 01 0 01 10 013678899999999999999999999
Q ss_pred CChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 346 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 346 ~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
.+..+...+.+.||++++++..+. +.+||+|+++++.+|+++.+++.. +.|+.+++ +|+|++++.+++++
T Consensus 255 ~~~~~~~~~~~~l~l~~~k~~~~l------~~~Gn~~sas~~~~L~~~~~~~~~-~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 255 ANARIVDKVCETIGIPRAKAASTL------ETYGNSSAATIPLSLSLANLEQPL-REGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred CCHHHHHHHHHHcCCCHHHhhhhH------HhhCcHHHHHHHHHHHHHHHhCCC-CCCCEEEEEEEehhhhheeeEEeC
Confidence 999999999999999999987665 889999999999999998877654 66765444 88899988887764
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=209.15 Aligned_cols=258 Identities=21% Similarity=0.234 Sum_probs=185.7
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..+++++.+|+.+|+++||+++|+++++||.+++++++++.. .+..+..++..+|++ .+++++++.+
T Consensus 37 ~~~Gi~~r~~-~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~a~~l~~~lg~~-~~~~~~v~~~ 113 (325)
T PRK12879 37 QRTGIKERRI-AHVEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYL-FPSTASQVQARLGIP-NAAAFDINAA 113 (325)
T ss_pred hccCceEEEE-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEEEECcc
Confidence 3677766553 446788999999999999999999999999999999887765 455677777899996 4889999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|.++|++|.++.+.+
T Consensus 114 C~~~~~al~~A~~~l~~g~~~~~Lv------------------------------------------------------- 138 (325)
T PRK12879 114 CAGFLYGLETANGLITSGLYKKVLV------------------------------------------------------- 138 (325)
T ss_pred chHHHHHHHHHHHHHHcCCCCEEEE-------------------------------------------------------
Confidence 9999999999999999998876611
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
+..|. ... .++++. ......++|||+|+||.+.+.. .
T Consensus 139 -----------------------v~~e~-~s~------------~~~~~~---~~~~~~~GDgAaA~ll~~~~~~----~ 175 (325)
T PRK12879 139 -----------------------IGAER-LSK------------VTDYTD---RTTCILFGDGAGAVVLEATENE----P 175 (325)
T ss_pred -----------------------EEehh-hcC------------cCCccc---cCceEEEeecceEEEEEecCCC----C
Confidence 00000 000 000000 0011237899999999875431 1
Q ss_pred CeeEEEEEe------EE------eecCCC---------CCCc--------cHHHHHHHHHHHcCCCCCCccEEEecCCCh
Q 013344 298 PILGVFRTF------AA------VGVDPA---------IMGV--------GPAVAIPAAVKSAGLQLDDIDLFEINEAFA 348 (445)
Q Consensus 298 ~~~~~i~~~------~~------~~~~p~---------~~~~--------~~~~ai~~aL~~aGl~~~DID~~e~h~~~~ 348 (445)
.+....... .. ...++. ..+. ....+++++|+++|++++|||+|.+|+.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~~h~~~~ 255 (325)
T PRK12879 176 GFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWVIPHQANL 255 (325)
T ss_pred CeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH
Confidence 111111100 00 000000 0010 113678999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEcc
Q 013344 349 SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERGD 423 (445)
Q Consensus 349 ~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~~ 423 (445)
.+...+.+.||++++++..+. +.+||+++++++..|+++.+++.. +.|..+++ +|+|++++.+|++++
T Consensus 256 ~~~~~~~~~lg~~~~~~~~~~------~~~Gn~~sas~~~~L~~~~~~g~~-~~Gd~vll~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 256 RIIESLCEKLGIPMEKTLVSV------EYYGNTSAATIPLALDLALEQGKI-KPGDTLLLYGFGAGLTWAALLVKWG 325 (325)
T ss_pred HHHHHHHHHcCCCHHHhhhhH------hhhCchHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEchhhhhEEEEEEeC
Confidence 999999999999999887654 789999999999999999877654 66664443 888999988888874
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.2e-24 Score=212.34 Aligned_cols=255 Identities=15% Similarity=0.227 Sum_probs=180.1
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..+++++.+|+.+|+++||+++|++|++||.+++++.+++.. .+..+..++..+|++.+.++++++.+
T Consensus 34 ~~~Gi~~r~v-~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~-~p~~a~~v~~~LGl~~~~~~~dv~~a 111 (345)
T TIGR00748 34 NGLPVEEKAV-PGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYA-VKPTATIVAEAIGATPDLTAADLEFA 111 (345)
T ss_pred eccceeeeec-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-ccchHHHHHHHcCCCCCceEEEHHHh
Confidence 4788877653 346789999999999999999999999999999998877764 33445567778999656889999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|..+|++|.++++.+
T Consensus 112 C~g~~~al~~A~~~i~sg~~~~vLV------------------------------------------------------- 136 (345)
T TIGR00748 112 CKAGTAGIQACMGLVASGMIKYGLA------------------------------------------------------- 136 (345)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEE-------------------------------------------------------
Confidence 9999999999999999998876511
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
+..|-... . ++... ...++|||+|+||...+....
T Consensus 137 -----------------------v~~d~~~~-----------~----~~~~~----~~~~GDGAaA~vl~~~~~~~~--- 171 (345)
T TIGR00748 137 -----------------------IGADTAQG-----------A----PGDAL----EYTAGAGGAAYIIGEKNTVAY--- 171 (345)
T ss_pred -----------------------EEEeeccc-----------C----CCccC----cccCCCceEEEEEccCCcceE---
Confidence 11110000 0 00000 012589999999975431100
Q ss_pred CeeEEEEEeEE------e--ecC-CC----CCC-----ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcC
Q 013344 298 PILGVFRTFAA------V--GVD-PA----IMG-----VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG 359 (445)
Q Consensus 298 ~~~~~i~~~~~------~--~~~-p~----~~~-----~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LG 359 (445)
..... .+.. . +.. |. ..+ .....+++++|+++|++++|||+|.+||++..+...+.+.||
T Consensus 172 -~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~~~~~~~~~~lg 249 (345)
T TIGR00748 172 -FEGTY-SYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNGKFYLVAARMLG 249 (345)
T ss_pred -eeccc-ceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCChHHHHHHHHHcC
Confidence 00000 0000 0 000 10 001 011278889999999999999999999999999999999999
Q ss_pred CCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEcc
Q 013344 360 LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERGD 423 (445)
Q Consensus 360 l~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~~ 423 (445)
++++++..+. .+..+||||+++++..|.++.++ . +.|..+++ +|+|++|+.++.++.
T Consensus 250 l~~ek~~~~~----~~~~~GNt~sAsipl~L~~~~~~-~--~~Gd~vll~~~G~G~s~~~~~~~~~ 308 (345)
T TIGR00748 250 FPKEQVKPGL----LTPRIGNTYSGATPVGLSAVLDI-A--EPGDRILAVSYGSGAGSDAFSIVVQ 308 (345)
T ss_pred CCHHHeeccc----cccccCchhhhHHHHHHHHHHHh-c--CCCCEEEEEEecCCcceeEEEEEEc
Confidence 9999887642 12789999999999999988753 2 55654443 889999877777763
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=208.34 Aligned_cols=257 Identities=22% Similarity=0.269 Sum_probs=185.3
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.++++.+++ ...+++++.+|+.+|+++||+++|++|++||.+++++.+++.. .+..+..++..+|++ .+++++++.+
T Consensus 35 ~~~gi~~r~-~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~-~~~~a~~l~~~lGl~-~~~~~~v~~~ 111 (318)
T TIGR00747 35 TRTGIKERR-IAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHA-FPSAACMVQAYLGIK-GIPAFDLSAA 111 (318)
T ss_pred cccCceEEE-ECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CChHHHHHHHHhCCC-CCcEeehhhh
Confidence 368887654 3667889999999999999999999999999999999887764 445667788899996 5799999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|+++|++|.++++.+
T Consensus 112 C~s~~~al~~A~~~i~~g~~~~~Lv------------------------------------------------------- 136 (318)
T TIGR00747 112 CAGFIYALSVAKQYIESGKYKTVLV------------------------------------------------------- 136 (318)
T ss_pred hHHHHHHHHHHHHHHHcCCCCEEEE-------------------------------------------------------
Confidence 9999999999999999998877611
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
+..|.. .+. +++. ...+...++|||+|+||.+.+...
T Consensus 137 -----------------------v~~e~~-~~~--------~~~~-------~~~~~~~~GDGAaA~lL~~~~~~~---- 173 (318)
T TIGR00747 137 -----------------------VGAEKL-SST--------LDWT-------DRGTCVLFGDGAGAVVLGESEDPG---- 173 (318)
T ss_pred -----------------------EEehhh-cCc--------CCcC-------CCCeEEEEecceeEEEEeecCCCC----
Confidence 011000 000 0000 001122379999999998754311
Q ss_pred CeeEEEEEe-EE----eecC----C--CCC------C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHH
Q 013344 298 PILGVFRTF-AA----VGVD----P--AIM------G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 352 (445)
Q Consensus 298 ~~~~~i~~~-~~----~~~~----p--~~~------~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~ 352 (445)
.+....... .. ...+ + ... + .....+++++|+++|++++|||+|.+|+.+..+..
T Consensus 174 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~~~~~~~ 253 (318)
T TIGR00747 174 GIISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPEDIDWFVPHQANLRIIE 253 (318)
T ss_pred cEEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHH
Confidence 111111110 00 0000 0 000 0 01236788999999999999999999999999999
Q ss_pred HHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 353 YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 353 ~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
.+.+.||++++++..+. +.+||+|+++++..|+++.+++.. +.|..+++ +|+|++++.+++++
T Consensus 254 ~~~~~lgi~~~k~~~~~------~~~Gn~~sas~~~~L~~~~~~~~~-~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 254 ALAKRLELDMSQVVKTV------HKYGNTSAASIPLALDELLRTGRI-KPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred HHHHHcCCCHHHeeehH------hhhCCHHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEehhheeeEEEEEC
Confidence 99999999999988654 679999999999999999887654 55654433 78899988888764
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.1e-23 Score=204.85 Aligned_cols=261 Identities=25% Similarity=0.250 Sum_probs=188.1
Q ss_pred EEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCce
Q 013344 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (445)
Q Consensus 52 v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~ 131 (445)
.+|. .+|+|.+++ ...++.+..+|+.+|++++|+++|+++++||.+++++.+++.. .+..+..++..+|+. .++.
T Consensus 32 ~~i~--~~~gi~~r~-~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~-~~~~~~~i~~~lG~~-~~~~ 106 (319)
T PRK09352 32 EWIV--TRTGIKERR-IAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYA-FPSTACLVQARLGAK-NAAA 106 (319)
T ss_pred HHhh--hhcCeEEEE-eCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CchHHHHHHHHhCCC-CCcE
Confidence 3454 478997654 4677899999999999999999999999999999999887654 344566777899994 6899
Q ss_pred EEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Q 013344 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 211 (445)
Q Consensus 132 ~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a 211 (445)
++++++|+|++.||..|.++|++|.++++.+
T Consensus 107 ~~v~~~Casg~~al~~A~~~i~~g~~~~vLv------------------------------------------------- 137 (319)
T PRK09352 107 FDLSAACSGFVYALSTADQFIRSGAYKNVLV------------------------------------------------- 137 (319)
T ss_pred eeccccchhHHHHHHHHHHHHHcCCCCEEEE-------------------------------------------------
Confidence 9999999999999999999999999887611
Q ss_pred HHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHH
Q 013344 212 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 291 (445)
Q Consensus 212 ~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~ 291 (445)
+..|...+ .+ .+ .+ ......++|||+|+||.+.+.
T Consensus 138 -----------------------------v~~e~~s~-~~--------~~-~~------~~~~~~~gDGaaA~ll~~~~~ 172 (319)
T PRK09352 138 -----------------------------IGAEKLSR-IV--------DW-TD------RSTCVLFGDGAGAVVLGASEE 172 (319)
T ss_pred -----------------------------EEehhhcc-cc--------Cc-cc------CCceEEEeccceEEEEEEcCC
Confidence 00000000 00 00 00 001223799999999988643
Q ss_pred HHhcCCCeeE-EEEEeEEe----ecCCC---------C---CCc--------cHHHHHHHHHHHcCCCCCCccEEEecCC
Q 013344 292 AMRKGLPILG-VFRTFAAV----GVDPA---------I---MGV--------GPAVAIPAAVKSAGLQLDDIDLFEINEA 346 (445)
Q Consensus 292 a~~~g~~~~~-~i~~~~~~----~~~p~---------~---~~~--------~~~~ai~~aL~~aGl~~~DID~~e~h~~ 346 (445)
. .... .+...+.. ..+.. . .+. ....+++++|+++|++++|||+|.+|+.
T Consensus 173 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~ 247 (319)
T PRK09352 173 P-----GILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPEDIDWLVPHQA 247 (319)
T ss_pred C-----CeEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC
Confidence 1 1111 11111000 01100 0 011 1235889999999999999999999999
Q ss_pred ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEcc
Q 013344 347 FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERGD 423 (445)
Q Consensus 347 ~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~~ 423 (445)
+..+...+.+.||++++++..+. +.+||++++.++..|+++.+++.. +.|..+++ +|.|+.+++++++++
T Consensus 248 ~~~~~~~~~~~lg~~~~~~~~~~------~~~Gn~~~a~~~~~L~~~~~~g~~-~~Gd~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 248 NLRIIDATAKKLGLPMEKVVVTV------DKYGNTSAASIPLALDEAVRDGRI-KRGDLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred CHHHHHHHHHHhCCCHHHhhhhH------HhhCCHHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEchhheeEEEEEEeC
Confidence 99999999999999999886554 679999999999999999877654 55654433 888999988888764
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.5e-23 Score=205.09 Aligned_cols=254 Identities=23% Similarity=0.266 Sum_probs=182.4
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.++++.+|+. ..+++++.+|+.+|+++||+++|+++++||.+++++++++.. .+..+..++..+|++ .+++++++.+
T Consensus 34 ~~~Gi~~r~~-~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~l~~~lg~~-~~~~~~v~~~ 110 (320)
T cd00830 34 TRTGIRERRI-ADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYL-FPATACLVQARLGAK-NAAAFDINAA 110 (320)
T ss_pred hccCceEEee-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEeecccc
Confidence 4677766553 445689999999999999999999999999999999887764 345677788899997 7899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|.++|++|.++++.+
T Consensus 111 C~s~~~al~~A~~~i~~g~~~~vLv------------------------------------------------------- 135 (320)
T cd00830 111 CSGFLYGLSTAAGLIRSGGAKNVLV------------------------------------------------------- 135 (320)
T ss_pred chHHHHHHHHHHHHHHcCCCCEEEE-------------------------------------------------------
Confidence 9999999999999999998877611
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
+..|. ....+ + |.. ......++|||+|+||.+.+. +.
T Consensus 136 -----------------------v~~e~-~s~~~--------~--~~~-----~~~~~~~GDgAaA~ll~~~~~----~~ 172 (320)
T cd00830 136 -----------------------VGAET-LSRIL--------D--WTD-----RSTAVLFGDGAGAVVLEATEE----DP 172 (320)
T ss_pred -----------------------EEehh-hcccc--------C--ccc-----CCceEEEeccceEEEEEecCC----CC
Confidence 00000 00000 0 000 011223799999999987542 12
Q ss_pred CeeEEEEEe-E----EeecCCC--------------C--C-C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 013344 298 PILGVFRTF-A----AVGVDPA--------------I--M-G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAF 347 (445)
Q Consensus 298 ~~~~~i~~~-~----~~~~~p~--------------~--~-~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~ 347 (445)
.++...... . ....+.. . + + .....+++++|+++|++++|||+|.+|+.+
T Consensus 173 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~ 252 (320)
T cd00830 173 GILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDDIDWFVPHQAN 252 (320)
T ss_pred cEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHHHCCEEEECCCC
Confidence 222211110 0 0001100 0 0 1 012378899999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEE
Q 013344 348 ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVF 419 (445)
Q Consensus 348 ~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l 419 (445)
..+...+.+.||++++++..+. ..+||+|+++++..|.++.+++.. +.|..+++ +|.|+++++++
T Consensus 253 ~~~~~~~~~~lgl~~~~~~~~~------~~~Gn~~sas~~~~L~~~~~~~~~-~~G~~vll~~~G~G~~~~~~l 319 (320)
T cd00830 253 LRIIEAVAKRLGLPEEKVVVNL------DRYGNTSAASIPLALDEAIEEGKL-KKGDLVLLLGFGAGLTWGAAL 319 (320)
T ss_pred HHHHHHHHHHhCCCHHHhhhhH------HhhCcHHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEchHHhhHHhh
Confidence 9999999999999999986554 679999999999999999887654 56664443 77787775543
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.9e-23 Score=206.84 Aligned_cols=252 Identities=16% Similarity=0.193 Sum_probs=178.7
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ...++++.+|+.+|+++||+++|++|+|||.++++++++++. .+..+..++..+|++..+++++++.+
T Consensus 35 ~~~Gi~~R~~-~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~-~p~~a~~v~~~Lgl~~~~~~~dv~~~ 112 (347)
T PRK04262 35 RGLGVEEKSV-PGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYA-VKPTATIVAEALGATPDLTAADLEFA 112 (347)
T ss_pred hccCeeeeec-CCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-cccHHHHHHHHcCCCCCceEEEHHHh
Confidence 3566665543 446789999999999999999999999999999999877754 33445567778999756889999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|++++.+|..|..+|++|.++++.+
T Consensus 113 C~~~~~aL~~A~~~i~sg~~~~aLV------------------------------------------------------- 137 (347)
T PRK04262 113 CKAGTAALQAAMGLVKSGMIKYALA------------------------------------------------------- 137 (347)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEE-------------------------------------------------------
Confidence 9999999999999999998876511
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
+..|. .+ ..| .... . ..++|||+|+||...+.
T Consensus 138 -----------------------v~~e~-~~----------~~~----~~~~---~-~~~GDGA~A~ll~~~~~------ 169 (347)
T PRK04262 138 -----------------------IGADT-AQ----------GAP----GDAL---E-YTAAAGGAAFIIGKEEV------ 169 (347)
T ss_pred -----------------------EEEee-ec----------cCC----CCCC---C-CcCCCCcEEEEEecCcc------
Confidence 11110 00 000 0000 0 01489999999886431
Q ss_pred CeeEEEEEeEEee-----------c-CCC----CCC-----ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHH
Q 013344 298 PILGVFRTFAAVG-----------V-DPA----IMG-----VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRN 356 (445)
Q Consensus 298 ~~~~~i~~~~~~~-----------~-~p~----~~~-----~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e 356 (445)
..++.+..... . .|. ... .....+++++|+++|++++|||+|.+||++..+...+.+
T Consensus 170 --~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~ 247 (347)
T PRK04262 170 --IAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNGKFPLRVAK 247 (347)
T ss_pred --cceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCCchHHHHHHHH
Confidence 11122110000 0 010 000 112378999999999999999999999999999999999
Q ss_pred HcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEcc
Q 013344 357 KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERGD 423 (445)
Q Consensus 357 ~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~~ 423 (445)
.||++++++..+. . -..+||||+++++.+|+++.++ . +.|..+++ +|+|+++.+++.+..
T Consensus 248 ~Lgl~~ek~~~~~-~---~~~~GNt~sAsi~~~L~~~~~~-~--~~Gd~vll~~~G~G~~~~~~~~~~~ 309 (347)
T PRK04262 248 MLGFTKEQVKPGL-L---TPYIGNTYSGSALLGLAAVLDV-A--KPGDRILVVSFGSGAGSDAFSITVT 309 (347)
T ss_pred HcCCCHHHhhccc-h---hhhhCChHHHHHHHHHHHHHHh-C--CCCCEEEEEecCCCcceeeEEEEec
Confidence 9999999886432 1 1789999999999999998763 2 55654443 888888866666654
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=8e-23 Score=208.08 Aligned_cols=274 Identities=18% Similarity=0.184 Sum_probs=178.4
Q ss_pred eeeccccCCCCC----CCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHH--HHHHHcCCCCCCce
Q 013344 58 YRTALCKSKRGG----FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECR--MAAFYAGFPETVPV 131 (445)
Q Consensus 58 ~rT~~~~~~~G~----~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~--~~~~~lGl~~~~~~ 131 (445)
.+|++.+|+.-. ..+.++.+|+.+|+++||+++|++|+|||.+|++++++++. .|++ .++..+|++ .+++
T Consensus 42 ~~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~---~p~~a~~v~~~Lgl~-~~~~ 117 (378)
T PRK06816 42 RNNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQL---MPGHASMVHGELGAP-PIEV 117 (378)
T ss_pred HhCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcC---ChHHHHHHHhhCCCC-CCce
Confidence 356666554310 11357899999999999999999999999999999887654 4554 445578986 4789
Q ss_pred EEecCcCcHHHHHHHHHHHHHHcCCCCeEe-----cCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHH
Q 013344 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIGS-----VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHR 206 (445)
Q Consensus 132 ~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~-----~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~ 206 (445)
++++.+|+|++.||..|.++|++|.++++. ..+...++.. |. +....
T Consensus 118 ~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~------------------~~------~~~~~---- 169 (378)
T PRK06816 118 VSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASR------------------FE------AEEEK---- 169 (378)
T ss_pred eeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhh------------------hh------hHHHH----
Confidence 999999999999999999999999998871 1111110000 00 00000
Q ss_pred HHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEe
Q 013344 207 KAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLL 286 (445)
Q Consensus 207 ~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL 286 (445)
+..+. +. ....|+. ......++|||+|+||
T Consensus 170 ----------------------------------~~~~~--~~---------~~~~~~~-----~~~~~~fGDGA~A~vl 199 (378)
T PRK06816 170 ----------------------------------LAELE--EN---------PEIAFEK-----DFLRWMLSDGAGAVLL 199 (378)
T ss_pred ----------------------------------hhcCc--cc---------CCCCCCC-----CCCCEeeecccEEEEE
Confidence 00000 00 0011111 0111237999999999
Q ss_pred eCHHHHHhcCCCeeEEEE---EeEE-------ee--cCC------------C--------C--C-Cc--------cHHHH
Q 013344 287 MKRSVAMRKGLPILGVFR---TFAA-------VG--VDP------------A--------I--M-GV--------GPAVA 323 (445)
Q Consensus 287 ~s~~~a~~~g~~~~~~i~---~~~~-------~~--~~p------------~--------~--~-~~--------~~~~a 323 (445)
...+.. .+........ .++. .+ ..| . . + +. .....
T Consensus 200 ~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (378)
T PRK06816 200 ENKPRP--DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKP 277 (378)
T ss_pred EecCCC--CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHH
Confidence 865421 1211000000 0000 00 000 0 0 0 00 01467
Q ss_pred HHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHc-----CCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCC
Q 013344 324 IPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKL-----GLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR 398 (445)
Q Consensus 324 i~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~L-----Gl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~ 398 (445)
++++|+++|++++|||+|.+||++..+...+.++| |++++++..+. ..+|||++++++.+|+++.+++.
T Consensus 278 i~~~L~~~gl~~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~~~~~------~~~GNt~sAsipi~L~~a~~~g~ 351 (378)
T PRK06816 278 LLELVDKRNLDPDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWFTNL------ATVGNTGSASIYIMLDELLNSGR 351 (378)
T ss_pred HHHHHHHcCCChhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhheEEec------cccccccchHHHHHHHHHHHcCC
Confidence 88899999999999999999999999999999987 89999987777 89999999999999999988777
Q ss_pred CCceeeEEEee--cc-cceeEEEEEEc
Q 013344 399 DCRFGVISMCI--GT-GMGAAAVFERG 422 (445)
Q Consensus 399 ~~~~G~~~~~~--G~-G~~~a~~l~~~ 422 (445)
. +.|+.+++. ++ +++++.+++.+
T Consensus 352 ~-~~Gd~vl~~~~~s~~~~~~~~~~~~ 377 (378)
T PRK06816 352 L-KPGQKILCFVPESGRFSTAFMLLTV 377 (378)
T ss_pred C-CCCCEEEEEEecccchhheeEEEEE
Confidence 6 888777663 22 35556665543
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.4e-22 Score=199.88 Aligned_cols=258 Identities=18% Similarity=0.086 Sum_probs=178.9
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEec-cCCCcccchHHHHHHHHcCCCCCCceEEecC
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTV-LAPGSQRASECRMAAFYAGFPETVPVRTVNR 136 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~-~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~ 136 (445)
.+|++.+|+. ...+++..+|+.+|+++||+++|++|++||.++++++ .+++. .+..+..++..+|++ .+++++++.
T Consensus 37 ~~~Gi~~r~~-~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~-~p~~a~~l~~~lGl~-~~~~~~v~~ 113 (339)
T PRK06840 37 EKFGIYEKPV-PGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYP-VWSSAPKIQHEIGAK-NAWAFDIMA 113 (339)
T ss_pred hhcCcceEee-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCC-CCchHHHHHHHhCCC-Ccccccccc
Confidence 4678876554 4456889999999999999999999999999987543 44443 334566777899996 688999999
Q ss_pred cCcHHHHHHHHHHHHHHc-CCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 013344 137 QCSSGLQAVADVAAAIKA-GFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 215 (445)
Q Consensus 137 ~CsSgl~Al~~A~~~I~s-G~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag 215 (445)
+|++++.||..|.++|++ |.++.+.+
T Consensus 114 ~C~~~~~al~~A~~~l~~~g~~~~~Lv----------------------------------------------------- 140 (339)
T PRK06840 114 VCASFPIALKVAKDLLYSDPSIENVLL----------------------------------------------------- 140 (339)
T ss_pred cchHHHHHHHHHHHHHhcCCCccEEEE-----------------------------------------------------
Confidence 999999999999999999 87765411
Q ss_pred CcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCC-CccccCCCCCCCCCCeeEEeeCHHHHHh
Q 013344 216 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMR 294 (445)
Q Consensus 216 ~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~-G~~t~~~~~~~~DGAaAvvL~s~~~a~~ 294 (445)
+..|- ..+.++ + .++. ..+ ..++|||+|+||.+.+.
T Consensus 141 -------------------------v~~~~-~s~~~~--------~-~~~~~~~~-----~~~GDgAaA~ll~~~~~--- 177 (339)
T PRK06840 141 -------------------------VGGYR-NSDLVD--------Y-DNPRTRFM-----FNFAAGGSAALLKKDAG--- 177 (339)
T ss_pred -------------------------Eeecc-cccccC--------c-CCCCeeee-----ccCCCceeEEEEEecCC---
Confidence 00000 000000 0 0000 000 01699999999986432
Q ss_pred cCCCeeEEEE-EeE----Eee-------c--C---------------CCCCCc--------cHHHHHHHHHHHcCCCCCC
Q 013344 295 KGLPILGVFR-TFA----AVG-------V--D---------------PAIMGV--------GPAVAIPAAVKSAGLQLDD 337 (445)
Q Consensus 295 ~g~~~~~~i~-~~~----~~~-------~--~---------------p~~~~~--------~~~~ai~~aL~~aGl~~~D 337 (445)
+..++.... ... ... . . +..+.. ....+++++|+++|++++|
T Consensus 178 -~~~il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~d 256 (339)
T PRK06840 178 -KNRILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREALRKSGYTPKD 256 (339)
T ss_pred -CCceEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHHcCCCHHH
Confidence 111221100 000 000 0 0 000000 1236889999999999999
Q ss_pred ccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--eccccee
Q 013344 338 IDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGA 415 (445)
Q Consensus 338 ID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~ 415 (445)
||+|.+|+.+..+...+.+.||++++++. +. ..+||+|++.++..|+++.+++.. +.|..+++ +|+|+++
T Consensus 257 id~~~~h~~~~~~~~~~~~~Lgl~~~~~~-~~------~~~Gn~~sas~~~~L~~~~~~~~~-~~Gd~ill~~~G~G~s~ 328 (339)
T PRK06840 257 IDYLAILHMKRSAHIALLEGLGLTEEQAI-YL------DEYGHLGQLDQILSLHLALEQGKL-KDGDLVVLVSAGTGYTW 328 (339)
T ss_pred CCEEEECCcCHHHHHHHHHHcCCCHHHeE-eH------HhccchhhhhHHHHHHHHHHcCCC-CCCCEEEEEEEehhhhe
Confidence 99999999999999999999999998874 33 678999999999999999876654 56664443 8999999
Q ss_pred EEEEEEcc
Q 013344 416 AAVFERGD 423 (445)
Q Consensus 416 a~~l~~~~ 423 (445)
++++++++
T Consensus 329 ~~~~l~~~ 336 (339)
T PRK06840 329 AATVIRWG 336 (339)
T ss_pred eEEEEEec
Confidence 99999874
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-23 Score=212.78 Aligned_cols=256 Identities=15% Similarity=0.126 Sum_probs=171.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC-ceEEecCcCcHHHHHHHHHHH
Q 013344 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAA 150 (445)
Q Consensus 72 ~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~-~~~~v~~~CsSgl~Al~~A~~ 150 (445)
+++..+|+.+|+++||+++|++|+|||.||+++++ ++. .+..+..++..||++..+ .+++++.+|++++++|.+|..
T Consensus 103 ~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~-~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~ 180 (391)
T PLN03169 103 NEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EAR-LPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKD 180 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCC-CCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHH
Confidence 45678999999999999999999999999999874 543 344455677799997655 479999999999999999999
Q ss_pred HHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccC
Q 013344 151 AIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVD 230 (445)
Q Consensus 151 ~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~ 230 (445)
+|++|..+.+.+
T Consensus 181 ~~~~~~~~~vLv-------------------------------------------------------------------- 192 (391)
T PLN03169 181 IAENNPGSRVLL-------------------------------------------------------------------- 192 (391)
T ss_pred HHHhCCCCeEEE--------------------------------------------------------------------
Confidence 999988765511
Q ss_pred CCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEee
Q 013344 231 PKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG 310 (445)
Q Consensus 231 ~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~ 310 (445)
|..|-..+ .+. .+.... .-....++.++|||+|+||...+.... .++.-.+.......
T Consensus 193 ----------v~~e~~s~-~~~-------~~~~~~--~~d~~~~~lFGDGAaA~vl~~~~~~~~--~~~~~~l~~~~~~~ 250 (391)
T PLN03169 193 ----------TTSETTIL-GFR-------PPSPDR--PYDLVGAALFGDGAAAVIIGADPIPVS--ESPFFELHTAIQQF 250 (391)
T ss_pred ----------EEEEcChh-hcc-------CCCccc--hhhhhhhhhccCceEEEEEecCCCccc--CCcceEEEeeeeeE
Confidence 00000000 000 000000 000112334799999999986442100 01111111111111
Q ss_pred cCCC---------------CCCc--------cHHHHHHHHHHHcCCCCCCcc--EEEecCCChHHHHHHHHHcCCCCCCc
Q 013344 311 VDPA---------------IMGV--------GPAVAIPAAVKSAGLQLDDID--LFEINEAFASQFVYCRNKLGLDPEKI 365 (445)
Q Consensus 311 ~~p~---------------~~~~--------~~~~ai~~aL~~aGl~~~DID--~~e~h~~~~~~~~~~~e~LGl~~~~v 365 (445)
.+.. .++. .....++++|+++|++++||| +|.+||++..+...+.++||++++++
T Consensus 251 ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~ 330 (391)
T PLN03169 251 LPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKL 330 (391)
T ss_pred cCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHH
Confidence 1100 0011 123577899999999999999 99999999999999999999999998
Q ss_pred CCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCC--ceeeE-EEe-ecccceeEEEEEEc
Q 013344 366 NVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDC--RFGVI-SMC-IGTGMGAAAVFERG 422 (445)
Q Consensus 366 n~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~--~~G~~-~~~-~G~G~~~a~~l~~~ 422 (445)
..+.-.+ +.+|||++++++.+|+++++++... +.|.. +++ +|+|++++++++++
T Consensus 331 ~~s~~~l---~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s~~~~ll~~ 388 (391)
T PLN03169 331 ECSRRAL---MDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGITFEGILARN 388 (391)
T ss_pred HHHHHHH---HHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHhHHHHHHhh
Confidence 6421111 7899999999999999998665421 13443 333 99999998887765
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-21 Score=201.83 Aligned_cols=250 Identities=22% Similarity=0.273 Sum_probs=174.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCC----------------------cc---cchHHHHHHHHcC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPG----------------------SQ---RASECRMAAFYAG 124 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~----------------------~~---~~~~a~~~~~~lG 124 (445)
...+|+.+++++||+++|++++++| ++++|+..... .. ....+..++..+|
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (411)
T PRK07314 71 RFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYG 150 (411)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhC
Confidence 3568999999999999999999998 57777643211 00 0123445677889
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
+ ..|.++++.+|+|++.||..|+++|++|++|++..... +. . .+...+..+..
T Consensus 151 l--~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~-----~~---~---------------~~~~~~~~~~~-- 203 (411)
T PRK07314 151 A--KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGA-----EA---A---------------ITPLGIAGFAA-- 203 (411)
T ss_pred C--CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeee-----cc---c---------------CCHHHHHHHHH--
Confidence 8 58999999999999999999999999999999822100 00 0 00000001100
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeE
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAV 284 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAv 284 (445)
.++.... ..+| +.. .+| |+. ..++..++|||+++
T Consensus 204 ----~~~ls~~------------~~~p------------~~~------------~~p-fd~-----~~dG~~~geGAaav 237 (411)
T PRK07314 204 ----ARALSTR------------NDDP------------ERA------------SRP-FDK-----DRDGFVMGEGAGIL 237 (411)
T ss_pred ----hccccCC------------CCCC------------CcC------------cCC-CcC-----CCCCEeEEceEEEE
Confidence 0000000 0000 111 223 332 23455589999999
Q ss_pred EeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH-H----HHH
Q 013344 285 LLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ-F----VYC 354 (445)
Q Consensus 285 vL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~-~----~~~ 354 (445)
||++++.|++++.++++++.+++... ..|..++.++..+++++|+++|++++|||+++.|..++.. . ..+
T Consensus 238 vL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al 317 (411)
T PRK07314 238 VLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAI 317 (411)
T ss_pred EEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHH
Confidence 99999999999999999999988754 2345556667899999999999999999999999988733 2 233
Q ss_pred HHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 355 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 355 ~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.++....+++.+..+..+||+.|++|+.+++.++.+|+++
T Consensus 318 ~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~ 359 (411)
T PRK07314 318 KRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQ 359 (411)
T ss_pred HHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCC
Confidence 344555556677777777789999999999999999999874
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-22 Score=198.66 Aligned_cols=251 Identities=20% Similarity=0.122 Sum_probs=177.5
Q ss_pred EEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCC----CCCCCcEEEEeccCCCcc----------------
Q 013344 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVD----PSEVGDIVVGTVLAPGSQ---------------- 111 (445)
Q Consensus 52 v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~----~~dId~vi~g~~~~~~~~---------------- 111 (445)
++|+|.+.+ ..+|+.+|+++||+++|++ +++||.|++|+..+....
T Consensus 2 ~~i~g~g~~--------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (332)
T cd00825 2 AVITGLGSY--------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVV 67 (332)
T ss_pred ceEEcccHH--------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchh
Confidence 567776665 7899999999999999999 999999999998665410
Q ss_pred ----cchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecC-ccchhhhhhhccccchhHhHHHH
Q 013344 112 ----RASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVN-PKVKAFEQAQNCLLPMGVTSENV 186 (445)
Q Consensus 112 ----~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~-~~~~~~~~~~~~~~~mg~~ae~~ 186 (445)
.+..+..++..+|+ ++|+++++.+|+|++.||..|.++|++|.++++.+. .......
T Consensus 68 ~~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~---------------- 129 (332)
T cd00825 68 TKAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAP---------------- 129 (332)
T ss_pred hcccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCH----------------
Confidence 12335667778999 589999999999999999999999999999988211 0000000
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCC
Q 013344 187 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 266 (445)
Q Consensus 187 a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~ 266 (445)
+. ..+-. . . ....++.. .+| |+.
T Consensus 130 ---~~------~~~~~---------~-~------------------------~~~~~~~~------------~~~-~~~- 152 (332)
T cd00825 130 ---MD------CEFDA---------M-G------------------------ALSTPEKA------------SRT-FDA- 152 (332)
T ss_pred ---HH------HHHHh---------h-c------------------------cccCCCCC------------CCC-CCC-
Confidence 00 00000 0 0 00001110 111 211
Q ss_pred CccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCC------CCccHHHHHHHHHHHcCCCCCCccE
Q 013344 267 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI------MGVGPAVAIPAAVKSAGLQLDDIDL 340 (445)
Q Consensus 267 G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~------~~~~~~~ai~~aL~~aGl~~~DID~ 340 (445)
..++..++||++|+||++++.+++.+.++++++.++.... ++.. .......+++++|+++|++++|||+
T Consensus 153 ----~~~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~ 227 (332)
T cd00825 153 ----AADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATI-DGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDY 227 (332)
T ss_pred ----CCCCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEcc-CCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCE
Confidence 2345568999999999999999988888888888776543 2221 1234568999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCC---cCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 341 FEINEAFASQFVYCRNKLGLDPEK---INVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 341 ~e~h~~~~~~~~~~~e~LGl~~~~---vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+++|+.+........+.++++..+ ++....+-.+||..++++...+..++..++..
T Consensus 228 ~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~ 286 (332)
T cd00825 228 LVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHG 286 (332)
T ss_pred EEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcC
Confidence 999999987665555555544332 34444455689999999999999999988876
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=200.67 Aligned_cols=248 Identities=20% Similarity=0.281 Sum_probs=169.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeccCCCc-------------------------ccchHHHHHHHHcCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS-------------------------QRASECRMAAFYAGF 125 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~----vi~g~~~~~~~-------------------------~~~~~a~~~~~~lGl 125 (445)
..+|+.+++++||+++|+++++||. +++|+...... ....++..++..+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4689999999999999999999986 66665432110 001233456678898
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
..|.++++++|+|++.||..|+++|++|++|++..... +. ...++ ....+
T Consensus 151 --~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~-----e~--~~~~~---------------------~~~~~ 200 (407)
T TIGR03150 151 --KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGA-----EA--AITPL---------------------GIAGF 200 (407)
T ss_pred --CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecc-----cC--cCCHH---------------------HHHHH
Confidence 58999999999999999999999999999999822100 00 00000 00000
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEE
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvv 285 (445)
.. .+.+.. .+ .+++. ..+| |+. ..++..++|||+++|
T Consensus 201 ~~------~~~ls~---------~~----------~~~~~------------~~~p-fd~-----~~~g~~~gEGAaalv 237 (407)
T TIGR03150 201 AA------MKALST---------RN----------DDPEK------------ASRP-FDK-----DRDGFVMGEGAGVLV 237 (407)
T ss_pred HH------hCcccC---------CC----------CCCCc------------CCCC-CcC-----CCCcEEEeceEEEEE
Confidence 00 000000 00 00000 1233 322 123334799999999
Q ss_pred eeCHHHHHhcCCCeeEEEEEeEEeec-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCh----HHHH-HHH
Q 013344 286 LMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFA----SQFV-YCR 355 (445)
Q Consensus 286 L~s~~~a~~~g~~~~~~i~~~~~~~~-----~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~----~~~~-~~~ 355 (445)
|++++.|++.+.++++++.+++.... .|...+.++..+++++|+++|++++|||++|+|++++ ..+. .+.
T Consensus 238 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~ 317 (407)
T TIGR03150 238 LEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIK 317 (407)
T ss_pred EeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHH
Confidence 99999999999999999998876542 2333455678999999999999999999999999998 3443 344
Q ss_pred HHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 356 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 356 e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
+.++-...+++.+..+-.+||+.|++|+.+++.++.+|++
T Consensus 318 ~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~ 357 (407)
T TIGR03150 318 RVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRD 357 (407)
T ss_pred HHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhc
Confidence 5556554455555555556999999999999999999987
|
FabB sequences should fall well below the noise cutoff of this model. |
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=206.18 Aligned_cols=249 Identities=18% Similarity=0.192 Sum_probs=172.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEec-CcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~-~~CsSgl~Al~~A~~~ 151 (445)
+.+.+|+.+|+++||+++|++|++||.||++++++ +. .+..+..++..+|++.++++++++ .+|+|++.||..|.++
T Consensus 83 ~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~-~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~ 160 (361)
T cd00831 83 EEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NP-TPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDL 160 (361)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CC-CCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHH
Confidence 35899999999999999999999999999998875 33 345566777899997668999998 8999999999999999
Q ss_pred HHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCC
Q 013344 152 IKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDP 231 (445)
Q Consensus 152 I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~ 231 (445)
|++|..+.+.+
T Consensus 161 ~~~~~~~~aLv--------------------------------------------------------------------- 171 (361)
T cd00831 161 LEANPGARVLV--------------------------------------------------------------------- 171 (361)
T ss_pred HHHCCCCEEEE---------------------------------------------------------------------
Confidence 99998766511
Q ss_pred CCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCC-ccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEee
Q 013344 232 KTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG-TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG 310 (445)
Q Consensus 232 ~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G-~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~ 310 (445)
|..|-.. ..++++. .-+......++|||+|+||.+.+..... .....++.+.....
T Consensus 172 ---------v~~e~~s-------------~~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~-~~~~~~~~~~~~~~ 228 (361)
T cd00831 172 ---------VSTELCS-------------LWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRR-ERPLFELVRAASTL 228 (361)
T ss_pred ---------EEeeccc-------------ceeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccc-cccceeeeccccee
Confidence 0000000 0000000 0000012337999999999876532100 00001111110000
Q ss_pred -----------cCCC----CCC--------ccHHHHHHHHHHHc--CCCCCCccEEEecCCChHHHHHHHHHcCCCCCCc
Q 013344 311 -----------VDPA----IMG--------VGPAVAIPAAVKSA--GLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKI 365 (445)
Q Consensus 311 -----------~~p~----~~~--------~~~~~ai~~aL~~a--Gl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~v 365 (445)
..+. .++ .....+++++|+++ |++++|||+|.+|+.+..+...+.++||++++++
T Consensus 229 ~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~~~i~~~v~~~lgl~~~~~ 308 (361)
T cd00831 229 LPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPEDL 308 (361)
T ss_pred eecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCccccceEEEECCCChHHHHHHHHHcCCCHHHH
Confidence 0000 001 11236789999999 9999999999999999999999999999999998
Q ss_pred CCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEE
Q 013344 366 NVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVF 419 (445)
Q Consensus 366 n~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l 419 (445)
..+.- ..+.+||+|+++++..|+++.+++.. +.|..+++ +|+|+++++++
T Consensus 309 ~~s~~---~l~~~GN~~sasi~~~L~~~~~~g~~-~~Gd~vll~~~G~G~s~~~~l 360 (361)
T cd00831 309 EASRM---VLRRYGNMSSSSVLYVLAYMEAKGRV-KRGDRGLLIAFGPGFTCESAV 360 (361)
T ss_pred HHHHH---HHHHhCCchhccHHHHHHHHHHhCCC-CCCCEEEEEEEcCCceeeeee
Confidence 63211 11889999999999999999887664 56665444 88898887665
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-22 Score=203.10 Aligned_cols=242 Identities=19% Similarity=0.185 Sum_probs=164.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK 153 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~ 153 (445)
+..+|+.+|+++||+++|+++++||.++++++++++. .+..+..++..+|+. +++++++.+|+|++.||..|.++|+
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~-~p~~a~~v~~~Lgl~--~~~~~v~~aCasg~~al~~A~~~i~ 170 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRA-YPAMAIEIQQALGIE--GFAFDMNVACSSATFGIQTAANAIR 170 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CcHHHHHHHHhcCCC--CcEEEecchhHHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999998876654 223345566688984 7899999999999999999999999
Q ss_pred cCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCC
Q 013344 154 AGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKT 233 (445)
Q Consensus 154 sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~ 233 (445)
+|.++++.+
T Consensus 171 ~g~~~~vLv----------------------------------------------------------------------- 179 (372)
T PRK07515 171 SGSARRVLV----------------------------------------------------------------------- 179 (372)
T ss_pred cCCCCEEEE-----------------------------------------------------------------------
Confidence 999887611
Q ss_pred CCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHh-cCCCeeEEEEEe------
Q 013344 234 GDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR-KGLPILGVFRTF------ 306 (445)
Q Consensus 234 g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~-~g~~~~~~i~~~------ 306 (445)
+..|...+. + .+ -++ .+...++|||+|+||++.+.+.. .+..+++.....
T Consensus 180 -------v~~e~~s~~-~--------~~-~d~------~~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~~ 236 (372)
T PRK07515 180 -------VNPEICSGH-L--------NF-RDR------DSHFIFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNNI 236 (372)
T ss_pred -------Eeeeccccc-c--------cc-cCC------CCCEEecCccEEEEEeeccccccCCCceEEEEEeecccccce
Confidence 000000000 0 00 000 01123799999999997654321 122333332110
Q ss_pred ----EEe-ecCCCC----------CCcc--------HHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHH-cCCC-
Q 013344 307 ----AAV-GVDPAI----------MGVG--------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNK-LGLD- 361 (445)
Q Consensus 307 ----~~~-~~~p~~----------~~~~--------~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~-LGl~- 361 (445)
+.. ...+.. .+.. ...+++++|+++|++++|||+|.+||.+..+...+.+. ||+.
T Consensus 237 ~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~~~d~~~~~llg~~~ 316 (372)
T PRK07515 237 RNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANINMNQLIGKKVLGRDA 316 (372)
T ss_pred ecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhccCCC
Confidence 000 001100 1111 24789999999999999999999999999998888888 5654
Q ss_pred -CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEE-e-ecccceeEEEEEE
Q 013344 362 -PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISM-C-IGTGMGAAAVFER 421 (445)
Q Consensus 362 -~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~-~-~G~G~~~a~~l~~ 421 (445)
+++...+. ..+||||+++++.+|++++++ . +.|..++ + +|+|++++.+|++
T Consensus 317 ~~~~~~~~~------~~~GNt~sasi~~~L~~~~~~--~-~~Gd~vll~~~G~G~~~~~~ll~ 370 (372)
T PRK07515 317 TPEEAPVIL------DEYANTSSAGSIIAFHKHSDD--L-AAGDLGVICSFGAGYSIGSVIVR 370 (372)
T ss_pred ChhhceEeH------HhcCCchhhHHHHHHHHHhcc--C-CCCCEEEEEEecccHHHHHHHhc
Confidence 45544444 889999999999999998643 2 5565433 3 8999988655554
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-21 Score=198.40 Aligned_cols=246 Identities=18% Similarity=0.300 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCC-C----cEEEEeccCCCcc-------------------------cchHHHHHHHHcC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEV-G----DIVVGTVLAPGSQ-------------------------RASECRMAAFYAG 124 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dI-d----~vi~g~~~~~~~~-------------------------~~~~a~~~~~~lG 124 (445)
...|+..++++||+++|++++++ + ++++|+....... ...++..++..+|
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 46789999999999999988877 3 5777775432100 0012445667889
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
+ +.|.++++++|+|++.||..|+++|++|++|++..... +. . ++ .+....
T Consensus 162 l--~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~-----e~---~---------------~~-----~~~~~~ 211 (424)
T PRK06333 162 F--KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGT-----EA---A---------------ID-----RVSLAG 211 (424)
T ss_pred C--CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeee-----cc---c---------------CC-----HHHHHH
Confidence 8 58999999999999999999999999999998821100 00 0 00 000000
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC--CCccccCCCCCCCCCCe
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSDGAG 282 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~--~G~~t~~~~~~~~DGAa 282 (445)
|.. .+.+... ...+++. ..+| |+. +|. .++||++
T Consensus 212 f~~------~~~l~~~------------------~~~~p~~------------~~~P-fd~~~~G~-------~~gEGaa 247 (424)
T PRK06333 212 FAA------ARALSTR------------------FNDAPEQ------------ASRP-FDRDRDGF-------VMGEGAG 247 (424)
T ss_pred HHH------ccccccc------------------CCCCCCc------------CCCC-CCCCCCCe-------EEecceE
Confidence 100 0000000 0000011 1334 332 333 3799999
Q ss_pred eEEeeCHHHHHhcCCCeeEEEEEeEEeec-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChH----HHHH
Q 013344 283 AVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS----QFVY 353 (445)
Q Consensus 283 AvvL~s~~~a~~~g~~~~~~i~~~~~~~~-----~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~----~~~~ 353 (445)
++||++++.|++.+.++++++.+++.... .|...+.+...+++++|+++|++++||||++.|.+++. .+..
T Consensus 248 ~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~ 327 (424)
T PRK06333 248 ILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVA 327 (424)
T ss_pred EEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHH
Confidence 99999999999999999999999887532 23334456679999999999999999999999999887 4433
Q ss_pred H-HHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 354 C-RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 354 ~-~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
. .+.+| ...++++++++..+||++|++|+.+++.++.+|++
T Consensus 328 al~~~fg-~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~ 369 (424)
T PRK06333 328 AIKKVFG-HVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRD 369 (424)
T ss_pred HHHHHhC-CCCCceeECcccchhhhHHHHHHHHHHHHHHHHhc
Confidence 3 34455 34578889999999999999999999999999987
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-21 Score=198.42 Aligned_cols=251 Identities=17% Similarity=0.145 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHHHH
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAIK 153 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~I~ 153 (445)
..+|+.+|+++||+++|++++|||.||++++++.. .+..+..++..||++..+. .++++.+|++++.+|..|..+++
T Consensus 102 a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (393)
T PLN03172 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--CchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999988743 2345566777999976554 46889999999999999999999
Q ss_pred cCCCCeEe-cCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCC
Q 013344 154 AGFYDIGS-VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPK 232 (445)
Q Consensus 154 sG~~~~v~-~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~ 232 (445)
++..+++. +...+ ... .|
T Consensus 180 ~~~~~~vLVV~~E~---------------------------------~S~-------------~~--------------- 198 (393)
T PLN03172 180 NNAGSRVLVVCSEI---------------------------------TAV-------------TF--------------- 198 (393)
T ss_pred cCCCCeEEEEEEeh---------------------------------hhh-------------hh---------------
Confidence 98876651 10000 000 00
Q ss_pred CCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecC
Q 013344 233 TGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD 312 (445)
Q Consensus 233 ~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~ 312 (445)
...++ .+.+.+ -.++.++|||+|+||...+... . .++.-++.++.....+
T Consensus 199 --------~~~~d-----~~~~~~---------------v~~~LFGDGAaAvVl~~~~~~~-~-~~~~~~i~~~~~~~~~ 248 (393)
T PLN03172 199 --------RGPSD-----THLDSL---------------VGQALFGDGAAAVIIGADPDTK-I-ERPLFEIVSAAQTILP 248 (393)
T ss_pred --------ccccc-----ccHHhh---------------hccchhcCceEEEEEecCCCCc-c-cCceeEEeeeccEEec
Confidence 00000 001111 1223479999999998643211 0 1111123322211000
Q ss_pred ---C------CCCC--------------ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCC
Q 013344 313 ---P------AIMG--------------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNG 369 (445)
Q Consensus 313 ---p------~~~~--------------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~g 369 (445)
. ...| ......++++|+++|++..|||+|.+|+.+..+...+.++||++++++..+-
T Consensus 249 ~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~ 328 (393)
T PLN03172 249 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQVEIKLDLKEEKLRATR 328 (393)
T ss_pred CCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCccccceEEecCCcHHHHHHHHHHcCCCHHHHHHHH
Confidence 0 0001 1123677889999999999999999999999999999999999999987652
Q ss_pred ChhcccChhhhHHHHHHHHHHHHHHh----cCCCCcee----eEEEe-ecccceeEEEEEEc
Q 013344 370 GALAIGHPLGTTGARCVATLLHEMKR----RGRDCRFG----VISMC-IGTGMGAAAVFERG 422 (445)
Q Consensus 370 G~la~Gh~~GatG~~~i~~~l~~L~~----~~~~~~~G----~~~~~-~G~G~~~a~~l~~~ 422 (445)
-.+ +.+|||++++++.+|+++++ ++.. +.| ..++| +|+|+++.++|+++
T Consensus 329 ~vl---~~yGNtSSaSv~~vL~~~~~~~~~~g~~-~~G~~~~~~ll~afGpG~t~~~~ll~~ 386 (393)
T PLN03172 329 HVL---SDYGNMSSACVLFILDEMRKKSIEEGKG-STGEGLEWGVLFGFGPGLTVETVVLHS 386 (393)
T ss_pred HHH---HHhCccHHhHHHHHHHHHHhhhhhcCCC-CCCCCcceEEEEEeCCcceeeeeeeEe
Confidence 222 78999999999999999874 2221 222 23444 99999999999887
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=199.49 Aligned_cols=249 Identities=18% Similarity=0.132 Sum_probs=167.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC-ceEEecCcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~-~~~~v~~~CsSgl~Al~~A~~~ 151 (445)
++..+|+.+|+++||+++|++++|||.||++++++++. +..+..++..||++..+ ..+.++.+|++++++|..|.++
T Consensus 106 ~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~--P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~l 183 (399)
T PLN03171 106 DAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHI--PGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDL 183 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC--CchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHH
Confidence 37889999999999999999999999999999998763 45566677799997543 2567777999999999999999
Q ss_pred HHcCCCCeEe-----cCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 152 IKAGFYDIGS-----VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 152 I~sG~~~~v~-----~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
|++|.++.+. ..+...++
T Consensus 184 i~~~~~~~vLVv~~e~~s~~~~~--------------------------------------------------------- 206 (399)
T PLN03171 184 AENNRGARVLVVAAEITLLLFNG--------------------------------------------------------- 206 (399)
T ss_pred HHhCCCCeEEEEEEeccccccCC---------------------------------------------------------
Confidence 9999876651 11100000
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEe
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTF 306 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~ 306 (445)
.|+ .+.+. ....+.++|||+|+||...+...+ +...++...
T Consensus 207 ----------------~d~-----~~~~~---------------~v~~~LFGDGAaA~vl~~~~~~~~---~~~~~l~~~ 247 (399)
T PLN03171 207 ----------------PDE-----GCFQT---------------LLNQGLFGDGAAAVIVGADADAAE---RPLFEIVSA 247 (399)
T ss_pred ----------------CCc-----ccHHh---------------hhccccccCccEEEEEecCCCCCC---CCceEEEEe
Confidence 000 00111 112345899999999987542111 111122222
Q ss_pred EEeecC-----------CC----CCC-cc-H---HHHHHHHHHH---------cCCCCCCccEEEecCCChHHHHHHHHH
Q 013344 307 AAVGVD-----------PA----IMG-VG-P---AVAIPAAVKS---------AGLQLDDIDLFEINEAFASQFVYCRNK 357 (445)
Q Consensus 307 ~~~~~~-----------p~----~~~-~~-~---~~ai~~aL~~---------aGl~~~DID~~e~h~~~~~~~~~~~e~ 357 (445)
.....+ .. ... .. | ...+++++++ +|++++||+++ +||++..+...+.++
T Consensus 248 ~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~Hq~~~~il~~v~~~ 326 (399)
T PLN03171 248 AQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VHPGSSAILDQVDAA 326 (399)
T ss_pred eeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEE-EcCCcHHHHHHHHHH
Confidence 111110 00 001 11 1 1333555554 58899999987 799999999999999
Q ss_pred cCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCC--CCcee---e-EEEe-ecccceeEEEEEEccc
Q 013344 358 LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR--DCRFG---V-ISMC-IGTGMGAAAVFERGDC 424 (445)
Q Consensus 358 LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~--~~~~G---~-~~~~-~G~G~~~a~~l~~~~~ 424 (445)
||++++++..+--.+ +.+|||++++++.+|+++.+++. . +.| . ++++ +|+|++|+.+++++..
T Consensus 327 Lgl~~ek~~~s~~~l---~~yGNtssaSip~~L~~~~~~~~~~~-~~G~~~d~vll~~fG~Glt~~~~ll~~~~ 396 (399)
T PLN03171 327 LGLEPEKLAASRRVL---SDYGNMFGATVIFALDELRRQMEEAA-AAGAWPELGVMMAFGPGLTVDAMLLHASG 396 (399)
T ss_pred cCCCHHHhHHHHHHH---HHhCcchhhhHHHHHHHHHhhHhhcC-CCCCCcceEEEEEEcccHHHHHHHhhccc
Confidence 999999987431111 78999999999999999876542 2 444 3 3343 9999999887777644
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.7e-20 Score=190.37 Aligned_cols=253 Identities=18% Similarity=0.276 Sum_probs=171.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCC-CCCCCc----EEEEeccCCCcc-------------------------cchHHHHHHH
Q 013344 72 DTYPDDLLAPVLKAVIEKTNVD-PSEVGD----IVVGTVLAPGSQ-------------------------RASECRMAAF 121 (445)
Q Consensus 72 ~~~~~eLa~~Aa~~AL~~Agi~-~~dId~----vi~g~~~~~~~~-------------------------~~~~a~~~~~ 121 (445)
.....+|+..++++||+++|++ +++++. +++|+..+.... ...++..++.
T Consensus 74 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~ 153 (421)
T PTZ00050 74 ESRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAI 153 (421)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHH
Confidence 4456899999999999999998 777775 444443221100 0013345666
Q ss_pred HcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHH
Q 013344 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 201 (445)
Q Consensus 122 ~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a 201 (445)
.+|+ +.|.++++++|+|++.||..|+++|++|++|++..... +. ..+ .+.
T Consensus 154 ~~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~-----e~------------------~~~-----p~~ 203 (421)
T PTZ00050 154 KHKL--KGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGT-----EA------------------SIT-----PVS 203 (421)
T ss_pred HhCC--CCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcc-----cc------------------cCC-----HHH
Confidence 7888 58999999999999999999999999999999822100 00 000 000
Q ss_pred HHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCC
Q 013344 202 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 281 (445)
Q Consensus 202 ~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGA 281 (445)
...+.+. +.+... ...+++.. .+| |+++ .+...++|||
T Consensus 204 ~~~f~~~------~~l~~~------------------~~~~p~~~------------~~p-fd~~-----~~G~~~gEGA 241 (421)
T PTZ00050 204 FAGFSRM------RALCTK------------------YNDDPQRA------------SRP-FDKD-----RAGFVMGEGA 241 (421)
T ss_pred HHHHHhh------hccccC------------------cCCCCCcc------------CCC-CcCC-----CCCEeeccce
Confidence 0001000 000000 00000111 233 3331 1222379999
Q ss_pred eeEEeeCHHHHHhcCCCeeEEEEEeEEeec-----CCCCCCccHHHHHHHHHHH-cCCCCCCccEEEecCCChHH----H
Q 013344 282 GAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKS-AGLQLDDIDLFEINEAFASQ----F 351 (445)
Q Consensus 282 aAvvL~s~~~a~~~g~~~~~~i~~~~~~~~-----~p~~~~~~~~~ai~~aL~~-aGl~~~DID~~e~h~~~~~~----~ 351 (445)
+++||++++.|++++.++++++.+++.... .|..++.++..+++++|++ +|++++|||++|+|.+++.. +
T Consensus 242 aalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E 321 (421)
T PTZ00050 242 GILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATSTPIGDKIE 321 (421)
T ss_pred EEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHH
Confidence 999999999999999999999999987643 3555677788999999999 99999999999999998833 2
Q ss_pred -HHHHHHcCCCC-CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 352 -VYCRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 352 -~~~~e~LGl~~-~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
..+.+.+|-.. ++++.+..+-.+||++|++|+.+++..+..|++.
T Consensus 322 ~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~ 368 (421)
T PTZ00050 322 LKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQ 368 (421)
T ss_pred HHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcC
Confidence 23444455432 5566666677899999999999999999998864
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.6e-21 Score=189.85 Aligned_cols=256 Identities=19% Similarity=0.213 Sum_probs=178.4
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcC
Q 013344 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (445)
Q Consensus 59 rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~C 138 (445)
.+++..++. ..+++++.+|+.+|++++|+++|+++++||.|++++.+++.. .+..+..++..+|++ .+++++++.+|
T Consensus 33 ~~gi~~r~~-~~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~i~~~lg~~-~~~~~~v~~~C 109 (324)
T cd00827 33 TTGIGQRHM-AGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDK-GKSAATYLAELLGLT-NAEAFDLKQAC 109 (324)
T ss_pred eeecceeEe-cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CccHHHHHHHHcCCC-CCceeehhhhh
Confidence 455554433 234688999999999999999999999999999999887664 445677788899997 79999999999
Q ss_pred cHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc
Q 013344 139 SSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFK 218 (445)
Q Consensus 139 sSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~ 218 (445)
+|++.||..|.++|++|.++++.+
T Consensus 110 ~s~~~al~~A~~~i~~g~~~~vlv-------------------------------------------------------- 133 (324)
T cd00827 110 YGGTAALQLAANLVESGPWRYALV-------------------------------------------------------- 133 (324)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEE--------------------------------------------------------
Confidence 999999999999999999877611
Q ss_pred cccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCC
Q 013344 219 DEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLP 298 (445)
Q Consensus 219 ~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~ 298 (445)
+..|...+. . . -+..+...++|||+|+||.+.+.. ....
T Consensus 134 ----------------------v~~e~~~~~-~-----------~-----~~~~~~~~~gdgaaA~ll~~~~~~--~~~~ 172 (324)
T cd00827 134 ----------------------VASDIASYL-L-----------D-----EGSALEPTLGDGAAAMLVSRNPGI--LAAG 172 (324)
T ss_pred ----------------------EEEHHhhhc-c-----------c-----CCCCccccccCceEEEEEecCccc--ccCC
Confidence 000000000 0 0 001122347999999999876531 0111
Q ss_pred eeEEEEEeE---------Eeec-C-------------CCC----C----CccHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 013344 299 ILGVFRTFA---------AVGV-D-------------PAI----M----GVGPAVAIPAAVKSAGLQLDDIDLFEINEAF 347 (445)
Q Consensus 299 ~~~~i~~~~---------~~~~-~-------------p~~----~----~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~ 347 (445)
+........ .... . .+. . ......+++++|++.|++ +|||+|.+|+.+
T Consensus 173 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~ 251 (324)
T cd00827 173 IVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPN 251 (324)
T ss_pred ceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccc-cccceeeccCch
Confidence 111111000 0000 0 000 0 011247888999999999 999999999999
Q ss_pred h-HHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEE
Q 013344 348 A-SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAV 418 (445)
Q Consensus 348 ~-~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~ 418 (445)
. .+...+.++|+++++++..+.- ..-+.+||+|++.++..|+++.+++.. +.|..+++ +|.|+.+..+
T Consensus 252 ~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~Gn~~sa~~~~~L~~~~~~~~~-~~Gd~vl~~~~G~G~~~~~~ 322 (324)
T cd00827 252 GKKILEAVAKKLGGPPEKASQTRW--ILLRRVGNMYAASILLGLASLLESGKL-KAGDRVLLFSYGSGFTAEAF 322 (324)
T ss_pred HHHHHHHHHHHccchHhhhccchh--hHHHHhCchHHHHHHHHHHHHHhcCCC-CCCCEEEEEEeccchhheec
Confidence 9 8899999999999888876521 112889999999999999999877654 56665554 6777666544
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-21 Score=197.69 Aligned_cols=251 Identities=16% Similarity=0.119 Sum_probs=169.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC-ceEEecCcCcHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~-~~~~v~~~CsSgl~Al~~A~~~I 152 (445)
...+|+.+|+++||+++|++++|||.||++++++.. .+..+..++..||++..+ .+++++.+|++++++|..|..+|
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i 177 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVN--MPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLA 177 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCC--CccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999998844 345566677799997544 37999999999999999999999
Q ss_pred HcCCCCeEe-cCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCC
Q 013344 153 KAGFYDIGS-VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDP 231 (445)
Q Consensus 153 ~sG~~~~v~-~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~ 231 (445)
++|....+. +.... +...|.
T Consensus 178 ~~~~~~~VLVV~~E~-------------------~S~~~~---------------------------------------- 198 (389)
T PLN03168 178 ENNKGARVLAVASEV-------------------TAVTYR---------------------------------------- 198 (389)
T ss_pred HhCCCCEEEEEEEeh-------------------hhhhcc----------------------------------------
Confidence 999877661 11000 000000
Q ss_pred CCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeec
Q 013344 232 KTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV 311 (445)
Q Consensus 232 ~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~ 311 (445)
..++ -+.+. .-.++.++|||+|+||...+.... .++.-.+........
T Consensus 199 ----------~~~~-----~~~~~---------------~~~~~LFGDGAaAvvl~~~~~~~~--~~~~~~~~~~~~~~~ 246 (389)
T PLN03168 199 ----------APSE-----NHLDG---------------LVGSALFGDGAGVYVVGSDPKPEV--EKALFEVHWAGETIL 246 (389)
T ss_pred ----------Cccc-----ccHHH---------------HhccccccCccEEEEEecCCCCcc--CCcceEEEeeeeEEE
Confidence 0000 00000 012344899999999987432110 011112222111111
Q ss_pred C------C-C--C-------CC-------ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCC
Q 013344 312 D------P-A--I-------MG-------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVN 368 (445)
Q Consensus 312 ~------p-~--~-------~~-------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~ 368 (445)
+ + . . +. ......++++|+..|+...|+++|.+|+.+..+...+.++|||+++++..+
T Consensus 247 p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s 326 (389)
T PLN03168 247 PESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGGPAILDQVEAKLKLTKDKMQGS 326 (389)
T ss_pred cCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCccccceEEecCCcHHHHHHHHHHcCCCHHHHHHH
Confidence 1 0 0 0 11 012356777888889988899999999999999999999999999998764
Q ss_pred CChhcccChhhhHHHHHHHHHHHHHHhcCCCCce-------e--eEEEe-ecccceeEEEEEEc
Q 013344 369 GGALAIGHPLGTTGARCVATLLHEMKRRGRDCRF-------G--VISMC-IGTGMGAAAVFERG 422 (445)
Q Consensus 369 gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~-------G--~~~~~-~G~G~~~a~~l~~~ 422 (445)
...+ +.+|||++++|+.+|++++++.. +. | ..+++ +|+|++++++|+++
T Consensus 327 ~~vl---~~yGNtSSaSv~~vL~~~~~~~~--~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~ 385 (389)
T PLN03168 327 RDIL---SEFGNMSSASVLFVLDQIRQRSV--KMGASTLGEGSEFGFFIGFGPGLTLEVLVLRA 385 (389)
T ss_pred HHHH---HHhCccHhhhHHHHHHHHHHHHh--hcCCCCCCCCccEEEEEEEcchhhhhhhhhee
Confidence 2222 78999999999999999875411 11 1 22333 99999999888887
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-19 Score=181.15 Aligned_cols=248 Identities=15% Similarity=0.238 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHHHHcCC--CCCCCCcEEEEeccCCCc-----------cc--------------chHHHHHHHHcCCCC
Q 013344 75 PDDLLAPVLKAVIEKTNV--DPSEVGDIVVGTVLAPGS-----------QR--------------ASECRMAAFYAGFPE 127 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi--~~~dId~vi~g~~~~~~~-----------~~--------------~~~a~~~~~~lGl~~ 127 (445)
...++..|+++||+++|+ +++++ +|++|+..+... ++ ..++..++..+|+
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l-- 80 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHF-- 80 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCC--
Confidence 467889999999999997 44454 677777644321 00 1234556678888
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHH
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRK 207 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~ 207 (445)
+.|.+++.++|+|++.||..|+++|+.|++|++..... +. . + ..+....|..
T Consensus 81 ~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~-----d~---~---------------~-----~~~~~~~f~~ 132 (342)
T PRK14691 81 KGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGA-----EA---V---------------I-----DTVSLAGFAA 132 (342)
T ss_pred CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecc-----cc---c---------------C-----CHHHHHHHHH
Confidence 58999999999999999999999999999998821100 00 0 0 0000000111
Q ss_pred HHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEee
Q 013344 208 AAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLM 287 (445)
Q Consensus 208 A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~ 287 (445)
.. +.... + ..+++.. .+| |+.+ .+...++|||+++||+
T Consensus 133 ~~-~ls~~-~----------------------~~~p~~~------------~rP-Fd~~-----r~G~v~gEGAa~lvLe 170 (342)
T PRK14691 133 AR-ALSTH-F----------------------NSTPEKA------------SRP-FDTA-----RDGFVMGEGAGLLIIE 170 (342)
T ss_pred hh-hhhcC-C----------------------CCCCCcC------------CCC-CCCC-----CCCccccceEEEEEEe
Confidence 00 00000 0 0001111 344 4431 2223389999999999
Q ss_pred CHHHHHhcCCCeeEEEEEeEEeecC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HH-HHHHH
Q 013344 288 KRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FV-YCRNK 357 (445)
Q Consensus 288 s~~~a~~~g~~~~~~i~~~~~~~~~-----p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~-~~~e~ 357 (445)
+++.|++++.++++++.+++..... |...+.++..+++++|+++||+++||||++.|++++.. +. .+.+.
T Consensus 171 s~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~ 250 (342)
T PRK14691 171 ELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHL 250 (342)
T ss_pred eHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHH
Confidence 9999999999999999999876543 44566778899999999999999999999999998874 22 33344
Q ss_pred cCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 358 LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 358 LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+|-. .+++.+.-+-.+||.+|++|+..++..+..|++.
T Consensus 251 fg~~-~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~ 288 (342)
T PRK14691 251 FGES-NALAITSTKSATGHLLGAAGGLETIFTVLALRDQ 288 (342)
T ss_pred hCCC-CCceEECCcccccCCcchhhHHHHHHHHHHHhCC
Confidence 5532 2344444445689999999999999888888753
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-21 Score=197.08 Aligned_cols=252 Identities=15% Similarity=0.151 Sum_probs=169.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC-ceEEecCcCcHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~-~~~~v~~~CsSgl~Al~~A~~~I 152 (445)
...+|+.+|+++||+++|++++|||.||++++++.. .+..+..++..||++..+ .+++++.+|++++.+|..|..++
T Consensus 105 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~ 182 (401)
T PLN03170 105 EVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLA 182 (401)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC--CChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHH
Confidence 345799999999999999999999999999987643 345667777799997554 37899999999999999999999
Q ss_pred HcCCCCeEec-CccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCC
Q 013344 153 KAGFYDIGSV-NPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDP 231 (445)
Q Consensus 153 ~sG~~~~v~~-~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~ 231 (445)
+++....+.+ ...+ . .. .|+
T Consensus 183 ~~~~~~~vLVV~~E~-------------------~--------------S~-------------~~~------------- 203 (401)
T PLN03170 183 ENNRGARVLVVCSEI-------------------T--------------AV-------------TFR------------- 203 (401)
T ss_pred HcCCCCeEEEEEEeh-------------------h--------------hh-------------ccC-------------
Confidence 9987766511 0000 0 00 000
Q ss_pred CCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeec
Q 013344 232 KTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV 311 (445)
Q Consensus 232 ~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~ 311 (445)
..++ -..++ ...++.++|||+|+||...+... . ..+..++......-.
T Consensus 204 ----------~~~~-----~~~~~---------------~~~~~LFGDGAaAvVl~~~~~~~-~-~~~~~~l~~~~~~~~ 251 (401)
T PLN03170 204 ----------GPSE-----SHLDS---------------MVGQALFGDGAAAVIVGADPDER-V-ERPLFQLVSASQTIL 251 (401)
T ss_pred ----------Cccc-----chhhh---------------hhhhhhhhceeEEEEEecCCccc-c-cCCceEEeeccceEe
Confidence 0000 00000 01223479999999998643210 0 111112222111001
Q ss_pred C------CC---CCC--------------ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCC
Q 013344 312 D------PA---IMG--------------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVN 368 (445)
Q Consensus 312 ~------p~---~~~--------------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~ 368 (445)
+ +. ..| ......++++|+++|++++|||+|.+|+.+..+...+.+.||++++++..+
T Consensus 252 p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~~s 331 (401)
T PLN03170 252 PDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRAT 331 (401)
T ss_pred cCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEecCCcHHHHHHHHHHcCCChHHHHHH
Confidence 0 00 001 112358889999999999999999999999999999999999999998643
Q ss_pred CChhcccChhhhHHHHHHHHHHHHHHh----cCCCCcee----eEEEe-ecccceeEEEEEEc
Q 013344 369 GGALAIGHPLGTTGARCVATLLHEMKR----RGRDCRFG----VISMC-IGTGMGAAAVFERG 422 (445)
Q Consensus 369 gG~la~Gh~~GatG~~~i~~~l~~L~~----~~~~~~~G----~~~~~-~G~G~~~a~~l~~~ 422 (445)
-- ....+|||++++++.+|+++++ ++.. +.| ..+++ +|+|+++.++++++
T Consensus 332 ~~---~l~~~GNtsSasv~~vL~~~~~~~~~~g~~-~~G~~~~~~ll~afGpG~t~~~~ll~~ 390 (401)
T PLN03170 332 RH---VLSEYGNMSSACVLFILDEMRKRSAEDGQA-TTGEGFDWGVLFGFGPGLTVETVVLHS 390 (401)
T ss_pred HH---HHHHhCccHHhHHHHHHHHHHHhHhhcCCC-CCCCCccEEEEEEeCchHhHHhHHhee
Confidence 21 1278999999999999999963 3322 233 23333 99999998887776
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.8e-21 Score=195.62 Aligned_cols=250 Identities=18% Similarity=0.195 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC-ceEEecCcCcHHHHHHHHHHHHHH
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAIK 153 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~-~~~~v~~~CsSgl~Al~~A~~~I~ 153 (445)
..+|+.+|+++||+++|++++|||.||++++++.. .+..+..++..||++..+ ..++++.+|++++.+|..|.++++
T Consensus 102 a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (391)
T PLN03173 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--ccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999987743 234556667799997655 356789999999999999999999
Q ss_pred cCCCCeEe-cCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCC
Q 013344 154 AGFYDIGS-VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPK 232 (445)
Q Consensus 154 sG~~~~v~-~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~ 232 (445)
++..+.+. +.... +...|
T Consensus 180 ~~~~~~vLVV~~E~-------------------~S~~~------------------------------------------ 198 (391)
T PLN03173 180 NNKGARVLVVCSEI-------------------TAVTF------------------------------------------ 198 (391)
T ss_pred hCCCCeEEEEEEeh-------------------hhhhh------------------------------------------
Confidence 98776651 10000 00000
Q ss_pred CCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC-CeeEEEEEeEEee-
Q 013344 233 TGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL-PILGVFRTFAAVG- 310 (445)
Q Consensus 233 ~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~-~~~~~i~~~~~~~- 310 (445)
...++ + +.+.+ -.++.++|||+|+||...+. .+. .+.-++.++....
T Consensus 199 --------~~~~d--~---~~~~~---------------v~~~LFGDGAaAvvl~~~~~---~~~~~~~~~l~~~~~~~~ 247 (391)
T PLN03173 199 --------RGPSD--T---HLDSL---------------VGQALFGDGAAAIIIGSDPV---LGVEKPLFELVSAAQTIL 247 (391)
T ss_pred --------CCccc--c---chhhh---------------hhhhhhcCceEEEEEeCCCC---CCcCCcceEEEeeeeEEe
Confidence 00000 0 00000 11234799999999986432 111 1111222111000
Q ss_pred ----------c-C--------CCCC---CccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCC
Q 013344 311 ----------V-D--------PAIM---GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVN 368 (445)
Q Consensus 311 ----------~-~--------p~~~---~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~ 368 (445)
+ . +..+ .......++++|+++|++.+|||+|.+|+.+..+...+.+.|||+++++..+
T Consensus 248 ~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s 327 (391)
T PLN03173 248 PDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLALKPEKLRAT 327 (391)
T ss_pred cCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEECCCcHHHHHHHHHHcCCChHHHHHH
Confidence 0 0 0000 0112368889999999999999999999999999999999999999998754
Q ss_pred CChhcccChhhhHHHHHHHHHHHHHHhc----CC----C-CceeeEEEeecccceeEEEEEEc
Q 013344 369 GGALAIGHPLGTTGARCVATLLHEMKRR----GR----D-CRFGVISMCIGTGMGAAAVFERG 422 (445)
Q Consensus 369 gG~la~Gh~~GatG~~~i~~~l~~L~~~----~~----~-~~~G~~~~~~G~G~~~a~~l~~~ 422 (445)
--.+ +.+|||++++|+.+|++++++ +. . .++|+ .+.+|+|+++.++|+++
T Consensus 328 ~~vl---~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l-~~afGpG~t~e~~ll~~ 386 (391)
T PLN03173 328 RHVL---SEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGV-LFGFGPGLTVETVVLHS 386 (391)
T ss_pred HHHH---HHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEE-EEEeCchHHHHHHHHhh
Confidence 2111 889999999999999999853 11 0 01222 33399999998777765
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-19 Score=187.14 Aligned_cols=250 Identities=16% Similarity=0.179 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEec-CcCcHHHHHHHHHHHHHH
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 153 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~-~~CsSgl~Al~~A~~~I~ 153 (445)
.+.+...|++++|+++|++|+|||.||+. ++++.. -+..+..++.++|++.++.+++++ .+|++++.+|..|.++|+
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p-~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~ 265 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNP-TPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLK 265 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCC-CCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHH
Confidence 45677788999999999999999999984 566654 345667777799998789999999 899999999999999999
Q ss_pred cCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCC
Q 013344 154 AGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKT 233 (445)
Q Consensus 154 sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~ 233 (445)
++....+-
T Consensus 266 ~~~~~~aL------------------------------------------------------------------------ 273 (521)
T PLN02854 266 ANPNSYAV------------------------------------------------------------------------ 273 (521)
T ss_pred hCCCCeEE------------------------------------------------------------------------
Confidence 98765541
Q ss_pred CCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhc-CCCeeEEEEEeEE----
Q 013344 234 GDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK-GLPILGVFRTFAA---- 308 (445)
Q Consensus 234 g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~-g~~~~~~i~~~~~---- 308 (445)
+|+.+- +| ..+....+ .-+...++.++|||+|+||.+.+..+.. ..+.. .++....
T Consensus 274 ------VVstE~-----~S------~~~y~g~D-rs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~-~~v~t~~~ad~ 334 (521)
T PLN02854 274 ------VVSTEN-----IT------LNWYFGND-RSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLV-HTVRTHKGADD 334 (521)
T ss_pred ------EEEEee-----ee------cCCCCCCc-hhhhcceeeeccceeEEEEecccccccccchhee-eEEEEEEeeCC
Confidence 111100 00 00000000 0011123458999999999874311100 00110 1111110
Q ss_pred -----eecC-------------------------------CCCCCcc-----HHHHHHHHHHHcCCCC------CCccEE
Q 013344 309 -----VGVD-------------------------------PAIMGVG-----PAVAIPAAVKSAGLQL------DDIDLF 341 (445)
Q Consensus 309 -----~~~~-------------------------------p~~~~~~-----~~~ai~~aL~~aGl~~------~DID~~ 341 (445)
...+ |..+... ....+++.|.++|+++ +|||+|
T Consensus 335 ~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf 414 (521)
T PLN02854 335 KNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHF 414 (521)
T ss_pred CccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEE
Confidence 0000 0000000 1346788899999997 699999
Q ss_pred EecCCChHHHHHHHHHcCCCC---CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeE
Q 013344 342 EINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAA 416 (445)
Q Consensus 342 e~h~~~~~~~~~~~e~LGl~~---~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a 416 (445)
.+|+++..+...+.+.||+++ ++...+. |.+|||++++++..|.++.+++.. +.|+.++. +|+|+.++
T Consensus 415 ~iHqggr~IId~v~k~LgL~~~~~e~sr~tL------~rfGNTSSASI~~~L~~~~~kGri-k~GD~Vl~iaFGsGft~~ 487 (521)
T PLN02854 415 CIHAGGRAVLDELQKNLQLSDWHMEPSRMTL------HRFGNTSSSSLWYELAYTEAKGRV-SAGDRVWQIAFGSGFKCN 487 (521)
T ss_pred EECCCCHHHHHHHHHHcCCCcccccchHHHh------hhcCChHhhHHHHHHHHHHHcCCC-CCCCEEEEEEEchhhhhh
Confidence 999999999999999999994 5555555 999999999999999999987765 67775433 89999997
Q ss_pred EEEEEccc
Q 013344 417 AVFERGDC 424 (445)
Q Consensus 417 ~~l~~~~~ 424 (445)
+++.++-+
T Consensus 488 sav~~~~~ 495 (521)
T PLN02854 488 SAVWKALR 495 (521)
T ss_pred heeeEEec
Confidence 77766543
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=186.66 Aligned_cols=251 Identities=18% Similarity=0.172 Sum_probs=165.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEec-CcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~-~~CsSgl~Al~~A~~~ 151 (445)
+...+|+..|+++||+++|++|+|||.||+ ++++... .+..+..++.++|++.++.+++++ .+|++|+.+|..|.++
T Consensus 170 ~ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~-~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~l 247 (502)
T PLN02377 170 EEAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNP-TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDM 247 (502)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCC-CCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHH
Confidence 457899999999999999999999999987 7777754 445667777799998789999999 7999999999999999
Q ss_pred HHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCC
Q 013344 152 IKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDP 231 (445)
Q Consensus 152 I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~ 231 (445)
|+++....+-
T Consensus 248 l~~~~~~~aL---------------------------------------------------------------------- 257 (502)
T PLN02377 248 LQVHRNTYAV---------------------------------------------------------------------- 257 (502)
T ss_pred HHcCCCCEEE----------------------------------------------------------------------
Confidence 9998765541
Q ss_pred CCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCc-cccCCCCCCCCCCeeEEeeCHHHHHh-cCCCeeEEEEEeEEe
Q 013344 232 KTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT-TTAGNSSQVSDGAGAVLLMKRSVAMR-KGLPILGVFRTFAAV 309 (445)
Q Consensus 232 ~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~-~t~~~~~~~~DGAaAvvL~s~~~a~~-~g~~~~~~i~~~~~~ 309 (445)
+|+.+- + ...++++.. ...-..+.++|||+|+||......++ ...+.. .++.....
T Consensus 258 --------VVstE~-~------------S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~-~iv~t~~~ 315 (502)
T PLN02377 258 --------VVSTEN-I------------TQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLV-HVVRTHRG 315 (502)
T ss_pred --------EEEEec-c------------ccccCCCCCccccccceeeccccEEEEEecccccccccccccc-eEEEEEEE
Confidence 111100 0 000000000 00112345899999999987321111 011100 11111110
Q ss_pred ---------ecCC------------CCC---Cc---------cH-----------------HHHHHHHHHHcC-CCCCCc
Q 013344 310 ---------GVDP------------AIM---GV---------GP-----------------AVAIPAAVKSAG-LQLDDI 338 (445)
Q Consensus 310 ---------~~~p------------~~~---~~---------~~-----------------~~ai~~aL~~aG-l~~~DI 338 (445)
..+. +.+ +. ++ .+.+++.++..+ ...+||
T Consensus 316 ~d~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~di 395 (502)
T PLN02377 316 ADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAF 395 (502)
T ss_pred EcCCccceeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhc
Confidence 0000 000 00 00 012233343433 346899
Q ss_pred cEEEecCCChHHHHHHHHHcCCCC---CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEE--eecccc
Q 013344 339 DLFEINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISM--CIGTGM 413 (445)
Q Consensus 339 D~~e~h~~~~~~~~~~~e~LGl~~---~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~--~~G~G~ 413 (445)
|+|.+|+++..+...+.+.||+++ ++...+. |.+|||++++++..|.++.+++.. +.|+.+. .+|+|+
T Consensus 396 dhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL------~r~GNTSSaSI~~aL~~~~~~gri-k~Gd~VlliaFGsGf 468 (502)
T PLN02377 396 DHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTL------HRFGNTSSSSIWYELAYIEAKGRM-RKGNRVWQIAFGSGF 468 (502)
T ss_pred CEEEECCCCHHHHHHHHHHcCCCcccchHHHHHH------HhcCCchhhHHHHHHHHHHHcCCC-CCCCeEEEEEEcccc
Confidence 999999999999999999999997 4444445 999999999999999999887765 6666443 399999
Q ss_pred eeEEEEEEccc
Q 013344 414 GAAAVFERGDC 424 (445)
Q Consensus 414 ~~a~~l~~~~~ 424 (445)
.+++++.+.-+
T Consensus 469 ~~~s~v~~~~~ 479 (502)
T PLN02377 469 KCNSAVWEALR 479 (502)
T ss_pred EeeeEEEEEec
Confidence 99777766533
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-19 Score=185.90 Aligned_cols=244 Identities=22% Similarity=0.277 Sum_probs=165.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCcc------------------cchHHHHHHHHcCCCCCCceE
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ------------------RASECRMAAFYAGFPETVPVR 132 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~~------------------~~~~a~~~~~~lGl~~~~~~~ 132 (445)
...|+.+|+++||+++|+++++|| .|++|+..+++.. ....+..++..+|+ +.|.+
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl--~g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDL--RGPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCC--CCCcc
Confidence 356999999999999999999999 7898876543310 11234556778998 47999
Q ss_pred EecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Q 013344 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 212 (445)
Q Consensus 133 ~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~ 212 (445)
+++.+|+|++.||..|+++|++|.+|++.+... + ...+...+..+..
T Consensus 165 ~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~-----~------------------~~~~~~~~~~~~~---------- 211 (424)
T smart00825 165 TVDTACSSSLVALHLACQSLRSGECDMALAGGV-----N------------------LILSPDTFVGFSR---------- 211 (424)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCeeEEeee-----e------------------ecCCHHHHHHHhh----------
Confidence 999999999999999999999999998821100 0 0000000000000
Q ss_pred HcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHH
Q 013344 213 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVA 292 (445)
Q Consensus 213 ~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a 292 (445)
.+ .+..++. .+| |+. ..+...++|||+++||++.+.+
T Consensus 212 -~~------------------------~l~~~~~------------~~p-f~~-----~~~g~~~geGAaalVLe~~e~A 248 (424)
T smart00825 212 -AG------------------------MLSPDGR------------CKT-FDA-----DADGYVRGEGVGVVVLKRLSDA 248 (424)
T ss_pred -cC------------------------CCCCCCC------------CCC-CCC-----CCCcccccceEEEEEEccHHHH
Confidence 00 0111111 122 321 1234458999999999999999
Q ss_pred HhcCCCeeEEEEEeEEeecCCC-----CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----H-HHHHHHcCCCC
Q 013344 293 MRKGLPILGVFRTFAAVGVDPA-----IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----F-VYCRNKLGLDP 362 (445)
Q Consensus 293 ~~~g~~~~~~i~~~~~~~~~p~-----~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~-~~~~e~LGl~~ 362 (445)
++.+.++++++.+++....... ..+.+...+++++|+++|++++|||+++.|..++.. + ..+.+.+|...
T Consensus 249 ~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~~~ 328 (424)
T smart00825 249 LRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQGR 328 (424)
T ss_pred HHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhccC
Confidence 9999999999998877542211 112334689999999999999999999999877653 2 23334445432
Q ss_pred ---CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 363 ---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 363 ---~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.++..+.-+-.+||++|++|+.+++.++.+|+++
T Consensus 329 ~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~ 365 (424)
T smart00825 329 PRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHG 365 (424)
T ss_pred CCCCceEEeccccccCCcccchhHHHHHHHHHHHhCC
Confidence 2343332233369999999999999999999875
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.5e-19 Score=183.00 Aligned_cols=249 Identities=22% Similarity=0.309 Sum_probs=170.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeccCCCc-------------------------ccchHHHHHHHHcC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~----vi~g~~~~~~~-------------------------~~~~~a~~~~~~lG 124 (445)
...+|+.+++++||+++|++++++|. +++|+..+... ....++..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 46789999999999999999988774 67776543210 01234556777899
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVD 203 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~ 203 (445)
+ +.|.++++.+|+|+++||..|+++|++|++|++.+.. ... . ..+...
T Consensus 150 l--~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~---------~--------------------~p~~~~ 198 (406)
T cd00834 150 L--RGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEAL---------I--------------------TPLTLA 198 (406)
T ss_pred C--CCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccc---------c--------------------CHHHHH
Confidence 8 4799999999999999999999999999999882210 000 0 000000
Q ss_pred HHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCee
Q 013344 204 SHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283 (445)
Q Consensus 204 s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaA 283 (445)
.+.+. +. +..+..- + + ...+| |+. ..+...++|||++
T Consensus 199 ~~~~~------~~------------------------l~~~~~~-p----~--~~~~p-f~~-----~~~g~~~geGA~a 235 (406)
T cd00834 199 GFAAL------RA------------------------LSTRNDD-P----E--KASRP-FDK-----DRDGFVLGEGAGV 235 (406)
T ss_pred HHHhc------CC------------------------cCCCCCC-C----c--cCCCC-CCC-----CCCCEeeeccEEE
Confidence 01000 00 0000000 0 0 00222 221 1233448999999
Q ss_pred EEeeCHHHHHhcCCCeeEEEEEeEEeec-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HH-H
Q 013344 284 VLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FV-Y 353 (445)
Q Consensus 284 vvL~s~~~a~~~g~~~~~~i~~~~~~~~-----~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~-~ 353 (445)
+||++.+.+++.+.++++++.+++.... .|...+.+...+++++|+++|++++|||++++|..++.. +. .
T Consensus 236 ~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~a 315 (406)
T cd00834 236 LVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKA 315 (406)
T ss_pred EEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHH
Confidence 9999999999999889998888876431 233335666789999999999999999999999887753 22 2
Q ss_pred HHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 354 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 354 ~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+.+.++-.+++++.+..+-.+||+.+++|+.+++.++.+|++.
T Consensus 316 l~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~ 358 (406)
T cd00834 316 IKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDG 358 (406)
T ss_pred HHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcC
Confidence 3333444445666666666789999999999999999999875
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-18 Score=173.60 Aligned_cols=281 Identities=18% Similarity=0.120 Sum_probs=180.5
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcC-CCCCCCCcEEEEec-----cCCCcccchHHHHHHHHcC
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTN-VDPSEVGDIVVGTV-----LAPGSQRASECRMAAFYAG 124 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Ag-i~~~dId~vi~g~~-----~~~~~~~~~~a~~~~~~lG 124 (445)
+.||++ +|.+.++. ...+.+..+|+..|++++|++++ +++++||.+++.+. .++.+ .......++..+|
T Consensus 45 ~~~i~~--~~~~~~~~--~~~~~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~-~~~~~~~~~~~lG 119 (348)
T PRK06147 45 GEWLIG--APVPLPPP--WRGPERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDL-EERLLRELEARLG 119 (348)
T ss_pred CCceEe--ecCcCCcc--cCchHHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcch-HHHHHHHHHHHhC
Confidence 567774 66654432 22245788999999999999999 79999998776432 12221 1122445566889
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc--cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP--KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~--~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~ 202 (445)
++...+.++++.+|+|+++||..|+++|++|+++.+.... .+.. ...++.+..
T Consensus 120 ~~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~-------------------------~~~~~~~~~ 174 (348)
T PRK06147 120 LRLEPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLT-------------------------GPTLAHYEA 174 (348)
T ss_pred CCCCCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccC-------------------------HHHHHHHHH
Confidence 8655788999999999999999999999999999882100 0000 000010000
Q ss_pred HHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCe
Q 013344 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAG 282 (445)
Q Consensus 203 ~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAa 282 (445)
. +. +...+ ..+|. .++|||+
T Consensus 175 -----~------~~-----------------------l~~~~-------------------~~~G~-------v~GEGA~ 194 (348)
T PRK06147 175 -----R------DR-----------------------LLTSQ-------------------NSNGF-------IPGEAAA 194 (348)
T ss_pred -----h------hc-----------------------cCCCC-------------------CCCce-------eeeceEE
Confidence 0 00 00000 01232 3799999
Q ss_pred eEEeeCHHHHHhcCCCeeEEEEEeEEeecC------CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HH
Q 013344 283 AVLLMKRSVAMRKGLPILGVFRTFAAVGVD------PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FV 352 (445)
Q Consensus 283 AvvL~s~~~a~~~g~~~~~~i~~~~~~~~~------p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~ 352 (445)
++||++.+.+++.+.++++ .+++..... +...+.+...+++++|+++|++++||||++.|-..... +.
T Consensus 195 a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~ 272 (348)
T PRK06147 195 AVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAA 272 (348)
T ss_pred EEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHH
Confidence 9999999999999998887 444332211 11245567799999999999999999999999876543 12
Q ss_pred -HHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEEcc
Q 013344 353 -YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGD 423 (445)
Q Consensus 353 -~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~~~ 423 (445)
.+.+.++-..++.+.+-=+-.+||..+++|+..+...+..+++.-....+.++....-.|.-.+++|++.+
T Consensus 273 ~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d~g~r~a~~l~~~~ 344 (348)
T PRK06147 273 LAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDDDGARAALVLEYRR 344 (348)
T ss_pred HHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCCCCceEEEEEeccc
Confidence 23334553333333333344589999999999999999998865321122344443455656667776544
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-18 Score=178.92 Aligned_cols=249 Identities=17% Similarity=0.244 Sum_probs=164.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCC-----CCCcEEEEeccCCCcc-------------------------cchHHHHHHHHc
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPS-----EVGDIVVGTVLAPGSQ-------------------------RASECRMAAFYA 123 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~-----dId~vi~g~~~~~~~~-------------------------~~~~a~~~~~~l 123 (445)
....|+..|+++||++||+++. +..+|++|+..+.... ...++..++..+
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 3567999999999999998642 4557888875433210 011344567788
Q ss_pred CCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHH
Q 013344 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVD 203 (445)
Q Consensus 124 Gl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~ 203 (445)
|+ +.|.++|+++|+|++.||..|+++|++|++|++..... +. .++...+..
T Consensus 172 gl--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~-----~~------------------~~~~~~~~~---- 222 (437)
T PLN02836 172 GF--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGT-----ES------------------SIDALSIAG---- 222 (437)
T ss_pred CC--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccc-----cc------------------cCCHHHHHH----
Confidence 88 58999999999999999999999999999998822100 00 000000001
Q ss_pred HHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCee
Q 013344 204 SHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283 (445)
Q Consensus 204 s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaA 283 (445)
+.+. .+.... +. .+++. ..+| |+. ..+...++||+++
T Consensus 223 -~~~~-~~l~~~-~~----------------------~~p~~------------~~~p-fd~-----~~~G~~~gEGaaa 259 (437)
T PLN02836 223 -FSRS-RALSTK-FN----------------------SCPTE------------ASRP-FDC-----DRDGFVIGEGAGV 259 (437)
T ss_pred -HHHh-hhhhcc-cC----------------------CCccc------------ccCC-ccc-----CCCCeeeecCEEE
Confidence 1000 000000 00 00011 1233 322 2234458999999
Q ss_pred EEeeCHHHHHhcCCCeeEEEEEeEEeec-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----H-H
Q 013344 284 VLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----V-Y 353 (445)
Q Consensus 284 vvL~s~~~a~~~g~~~~~~i~~~~~~~~-----~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~-~ 353 (445)
+||++++.|++++.++++++.+++.... .|...+.+...+++++|+++|++++||||++.|++++... . .
T Consensus 260 lVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~a 339 (437)
T PLN02836 260 LVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARA 339 (437)
T ss_pred EEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHH
Confidence 9999999999999999999998887542 2322334456899999999999999999999999988532 2 2
Q ss_pred HHHHcCCC----CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 354 CRNKLGLD----PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 354 ~~e~LGl~----~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+.+.+|-. .-+++...+ .+||+.|++|+.+++.++.+|+++
T Consensus 340 i~~~~~~~~~~~~~~v~s~K~--~~GH~~~AsG~~~li~~~l~l~~~ 384 (437)
T PLN02836 340 IKTVFSEHATSGGLAFSSTKG--ATGHLLGAAGAVEAIFSVLAIHHG 384 (437)
T ss_pred HHHHhcccccCCCCeeECCcc--cccccHHHHHHHHHHHHHHHHhcC
Confidence 33334422 123444444 459999999999999999999865
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.7e-18 Score=172.09 Aligned_cols=238 Identities=23% Similarity=0.329 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHcCCCC--CCCCcEEEEeccCCCc----------c------------------cchHHHHHHHHcCCC
Q 013344 77 DLLAPVLKAVIEKTNVDP--SEVGDIVVGTVLAPGS----------Q------------------RASECRMAAFYAGFP 126 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~--~dId~vi~g~~~~~~~----------~------------------~~~~a~~~~~~lGl~ 126 (445)
.++..++++||+++|+++ +++ .|++|+..+... . ...++..++..+|+
T Consensus 58 ~~~~~a~~~Al~dagl~~~~~~~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~- 135 (381)
T PRK05952 58 DLTKTVVTAALKDAGLTPPLTDC-GVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGT- 135 (381)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCE-EEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCC-
Confidence 366789999999999965 233 577887533210 0 01234556678888
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHH
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHR 206 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~ 206 (445)
+.|.+++.++|+|++.||..|+++|++|++|.+..... + ..+++ +....|.
T Consensus 136 -~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~-----d------------------~~~~~-----~~~~~~~ 186 (381)
T PRK05952 136 -QGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAV-----E------------------APITP-----LTLAGFQ 186 (381)
T ss_pred -CCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccc-----c------------------ccCCH-----HHHHHHH
Confidence 58999999999999999999999999999998822100 0 00111 1111111
Q ss_pred HHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEe
Q 013344 207 KAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLL 286 (445)
Q Consensus 207 ~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL 286 (445)
.. + .+.. +. .+| |+.+ .+...++||++++||
T Consensus 187 ~~------~------------------------~ls~-~~------------~rP-fd~~-----r~G~v~gEGaa~lvL 217 (381)
T PRK05952 187 QM------G------------------------ALAK-TG------------AYP-FDRQ-----REGLVLGEGGAILVL 217 (381)
T ss_pred hc------C------------------------CcCC-CC------------CCC-CCCC-----CCCccccccEEEEEE
Confidence 00 0 0111 11 344 4431 122338999999999
Q ss_pred eCHHHHHhcCCCeeEEEEEeEEeec-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHHHHHH
Q 013344 287 MKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCRNK 357 (445)
Q Consensus 287 ~s~~~a~~~g~~~~~~i~~~~~~~~-----~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~~~~e~ 357 (445)
++++.|++++.++++++.+++.... .|...+..+..+++++|+++|++++|||+++.|...+.. +...+++
T Consensus 218 e~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~ 297 (381)
T PRK05952 218 ESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQA 297 (381)
T ss_pred eeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHH
Confidence 9999999999999999999887532 233445567799999999999999999999999887653 3333333
Q ss_pred cCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 358 LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 358 LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+ ..++++.+..+..+||+.|++|+.+++.++..|++.
T Consensus 298 ~--fg~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~ 334 (381)
T PRK05952 298 L--FPHRVAVSSTKGATGHTLGASGALGVAFSLLALRHQ 334 (381)
T ss_pred H--cCCCCeeecchhhhccChHHHHHHHHHHHHHHHhcC
Confidence 3 124577777788899999999999999999998864
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-18 Score=177.39 Aligned_cols=248 Identities=18% Similarity=0.238 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc--------------c-----------cchHHHHHHHHcCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS--------------Q-----------RASECRMAAFYAGF 125 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~--------------~-----------~~~~a~~~~~~lGl 125 (445)
...++..++++||+++|+++.+.+ +|++|+...... . ...++..++..+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 356889999999999999765544 578887643221 0 01245566778898
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
+.|.++++++|+|++.||..|+++|++|++|++..... + -..+...+..|..
T Consensus 154 --~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~-----d------------------~~~~~~~~~~f~~--- 205 (414)
T PRK08722 154 --RGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGA-----E------------------KASTPLGMAGFGA--- 205 (414)
T ss_pred --CCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecc-----c------------------ccCCHHHHHHHHH---
Confidence 58999999999999999999999999999999821100 0 0000000011111
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccC-CCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeE
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD-DGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAV 284 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d-~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAv 284 (445)
. + .++.+ +.+. ...+| |+. ..+...++||++++
T Consensus 206 --~------~------------------------~ls~~~~~p~--------~~~rp-fd~-----~~~G~~~gEGaaal 239 (414)
T PRK08722 206 --A------K------------------------ALSTRNDEPQ--------KASRP-WDK-----DRDGFVLGDGAGMM 239 (414)
T ss_pred --c------C------------------------CcccCCCCCc--------cccCc-CcC-----CCCceEeeceEEEE
Confidence 0 0 00100 0000 01344 433 12223379999999
Q ss_pred EeeCHHHHHhcCCCeeEEEEEeEEeec-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HH-HH
Q 013344 285 LLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FV-YC 354 (445)
Q Consensus 285 vL~s~~~a~~~g~~~~~~i~~~~~~~~-----~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~-~~ 354 (445)
||++++.|++++.++++++.+++.... .|...+.+...+++++|+++|++++||||++.|.+++.. +. .+
T Consensus 240 vLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al 319 (414)
T PRK08722 240 VLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGI 319 (414)
T ss_pred EEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHH
Confidence 999999999999999999999887542 234344556789999999999999999999999988763 33 33
Q ss_pred HHHcCCC-CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 355 RNKLGLD-PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 355 ~e~LGl~-~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.+|-. .+++..+.-+-.+||.+|++|+.+++..+..|+++
T Consensus 320 ~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~ 362 (414)
T PRK08722 320 KRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQ 362 (414)
T ss_pred HHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcC
Confidence 3445532 33444444444589999999999999999988764
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-19 Score=184.45 Aligned_cols=244 Identities=15% Similarity=0.178 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEec-CcCcHHHHHHHHHHHHHH
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 153 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~-~~CsSgl~Al~~A~~~I~ 153 (445)
..+|+.+|+++||+++|++|+|||.||+.++++.. .+..+..++..+|++.++.+++++ .+|++++.+|..|.++++
T Consensus 148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~--~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~ 225 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNP--TPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQ 225 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC--CCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHH
Confidence 67899999999999999999999999999998863 345566777799997789999999 899999999999999999
Q ss_pred cCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCC
Q 013344 154 AGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKT 233 (445)
Q Consensus 154 sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~ 233 (445)
++....+-
T Consensus 226 ~~~~~~aL------------------------------------------------------------------------ 233 (478)
T PLN02932 226 VHRNTYAL------------------------------------------------------------------------ 233 (478)
T ss_pred cCCCCeEE------------------------------------------------------------------------
Confidence 98765541
Q ss_pred CCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCC-ccccCCCCCCCCCCeeEEeeCHHHH-HhcCCCeeEEEEEeEE---
Q 013344 234 GDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG-TTTAGNSSQVSDGAGAVLLMKRSVA-MRKGLPILGVFRTFAA--- 308 (445)
Q Consensus 234 g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G-~~t~~~~~~~~DGAaAvvL~s~~~a-~~~g~~~~~~i~~~~~--- 308 (445)
+|+.+- + ...++++. .-.....+.++|||+|+||...+.. ++...+.+ ..+....
T Consensus 234 ------VVstE~-~------------S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~-~~v~t~~~ad 293 (478)
T PLN02932 234 ------VVSTEN-I------------TQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELV-HTVRVHTGAD 293 (478)
T ss_pred ------EEEEee-c------------ccccCCCcchhhhccceeecccceEEEEecccccccCcceEEE-eeeeeeeccC
Confidence 111100 0 00000000 0001134558999999999875411 10000111 0011110
Q ss_pred ------eecCCCCC---C-----ccHH-----------------------------HHHHHHHHH--cCCCC---CCccE
Q 013344 309 ------VGVDPAIM---G-----VGPA-----------------------------VAIPAAVKS--AGLQL---DDIDL 340 (445)
Q Consensus 309 ------~~~~p~~~---~-----~~~~-----------------------------~ai~~aL~~--aGl~~---~DID~ 340 (445)
...+.+.. + .-|. ..-++.++. .++.+ +|||+
T Consensus 294 ~~~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~ 373 (478)
T PLN02932 294 DRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEH 373 (478)
T ss_pred CCccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhce
Confidence 00000000 0 0000 011122222 24444 78999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCc---CCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEE-e-eccccee
Q 013344 341 FEINEAFASQFVYCRNKLGLDPEKI---NVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISM-C-IGTGMGA 415 (445)
Q Consensus 341 ~e~h~~~~~~~~~~~e~LGl~~~~v---n~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~-~-~G~G~~~ 415 (445)
|.+|+.+..+...+.+.||++++++ ..+. |.+|||++++++..|..++.++.. +.|+.++ + +|+|+.+
T Consensus 374 f~iHqggr~IIdav~k~LgL~~~~~e~s~~tL------~rfGNTSSaSI~~~L~~~ea~gri-k~Gd~vl~iaFGsGf~~ 446 (478)
T PLN02932 374 FCIHAGGRALIDEMEKNLHLTPLDVEASRMTL------HRFGNTSSSSIWYELAYTEAKGRM-KKGDRIWQIALGSGFKC 446 (478)
T ss_pred EEEccCCHHHHHHHHHHcCCChHHHHHHHHHH------HHhCChhhhHHHHHHHHHHHcCCC-CCCCEEEEEEEeccHHH
Confidence 9999999999999999999999554 4445 999999999999999999877655 6676443 3 8999988
Q ss_pred EEEE
Q 013344 416 AAVF 419 (445)
Q Consensus 416 a~~l 419 (445)
++++
T Consensus 447 ~s~v 450 (478)
T PLN02932 447 NSSV 450 (478)
T ss_pred HHHH
Confidence 6443
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.8e-18 Score=174.21 Aligned_cols=250 Identities=19% Similarity=0.177 Sum_probs=161.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCC--cEEEEeccCC----------------Cc--------ccchHHHHHHHHcCCCC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVG--DIVVGTVLAP----------------GS--------QRASECRMAAFYAGFPE 127 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId--~vi~g~~~~~----------------~~--------~~~~~a~~~~~~lGl~~ 127 (445)
....|+..|+++||+++|+++.+.+ +|++|+.... .. ....++..++..+|+
T Consensus 79 ~~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl-- 156 (410)
T PRK07103 79 LSAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGI-- 156 (410)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCC--
Confidence 3578999999999999998643222 4555543211 00 001234456678898
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHH
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRK 207 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~ 207 (445)
+.|.++++.+|+|++.||..|+++|++|++|++...... -.++.. ....+..
T Consensus 157 ~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~-----------------------~~~~~~-----~~~~~~~ 208 (410)
T PRK07103 157 RGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGAL-----------------------MDLSYW-----ECQALRS 208 (410)
T ss_pred CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccc-----------------------ccCCHH-----HHHHHHH
Confidence 579999999999999999999999999999998211000 000000 0000100
Q ss_pred HHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEee
Q 013344 208 AAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLM 287 (445)
Q Consensus 208 A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~ 287 (445)
. .......+ . .+++. ..+| |+. ..++..++||++++||+
T Consensus 209 ~-~~l~~~~~----------~------------~~p~~------------~~rP-fd~-----~~dG~v~gEGaaalvLe 247 (410)
T PRK07103 209 L-GAMGSDRF----------A------------DEPEA------------ACRP-FDQ-----DRDGFIYGEACGAVVLE 247 (410)
T ss_pred c-cccccCcc----------C------------CCccc------------CcCC-CCC-----CCCCeeEeeeEEEEEEc
Confidence 0 00000000 0 00001 1344 433 23445589999999999
Q ss_pred CHHHHHhcCCCeeEEEEEeEEeecC---CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHHHHHHcCC
Q 013344 288 KRSVAMRKGLPILGVFRTFAAVGVD---PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCRNKLGL 360 (445)
Q Consensus 288 s~~~a~~~g~~~~~~i~~~~~~~~~---p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~~~~e~LGl 360 (445)
+.+.|++.+.++++++.+++..... +.....+...+++++|+++|++++||||++.|.+++.. +...+...+.
T Consensus 248 ~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt~~~D~~E~~al~~~~~ 327 (410)
T PRK07103 248 SAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPLGDETELAALFASGL 327 (410)
T ss_pred cHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCCCCCHHHHHHHhcCCC
Confidence 9999999999999999998875321 11223345689999999999999999999999998864 3333322232
Q ss_pred CCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 361 DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 361 ~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+-+++...+.+ ||+.|++|+.+++.++.+|++.
T Consensus 328 ~~~~v~s~k~~~--Gh~~~AsG~~~l~~~~l~l~~~ 361 (410)
T PRK07103 328 AHAWINATKSLT--GHGLSAAGIVELIATLLQMRAG 361 (410)
T ss_pred CCCeEECCCccc--ccCchhhhHHHHHHHHHHHhCC
Confidence 233455555554 9999999999999999999864
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.4e-18 Score=177.36 Aligned_cols=244 Identities=18% Similarity=0.258 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHHcCCCCC---CCC----cEEEEeccCCCc---c---------------------cchHHHHHHHHcCC
Q 013344 77 DLLAPVLKAVIEKTNVDPS---EVG----DIVVGTVLAPGS---Q---------------------RASECRMAAFYAGF 125 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~~---dId----~vi~g~~~~~~~---~---------------------~~~~a~~~~~~lGl 125 (445)
.++..++++||+++||+++ +++ +|++|+..+... + ....+..++..+|+
T Consensus 201 ~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl 280 (540)
T PLN02787 201 LYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGW 280 (540)
T ss_pred HHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCC
Confidence 5778899999999999764 232 588888643210 0 01123455667888
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
..|.++++++|+|++.||..|+++|++|++|++.... .+ -.++...+..|..
T Consensus 281 --~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG-----~d------------------~~l~p~~~~~f~~--- 332 (540)
T PLN02787 281 --MGPNYSISTACATSNFCILNAANHIIRGEADVMLCGG-----SD------------------AAIIPIGLGGFVA--- 332 (540)
T ss_pred --CCCccccccccccHHHHHHHHHHHHHcCCCCEEEEec-----cc------------------cccCHHHHHHHHH---
Confidence 5899999999999999999999999999999982210 00 0001101111111
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC--CCccccCCCCCCCCCCee
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSDGAGA 283 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~--~G~~t~~~~~~~~DGAaA 283 (445)
. .+.... + -+++. .++| |+. +|.+ ++||+++
T Consensus 333 --~-~aLS~~--------------~----------~~p~~------------~~rP-FD~~rdGfv-------~GEGAa~ 365 (540)
T PLN02787 333 --C-RALSQR--------------N----------DDPTK------------ASRP-WDMNRDGFV-------MGEGAGV 365 (540)
T ss_pred --H-HHhhcc--------------C----------CCccc------------ccCC-cccCCCCcc-------cccceEE
Confidence 0 000000 0 00011 1445 543 3443 8999999
Q ss_pred EEeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HH-H
Q 013344 284 VLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FV-Y 353 (445)
Q Consensus 284 vvL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~-~ 353 (445)
+||++.+.|++.|.++++++.+++... ..|+..+.+...+++++|+++|++++||||++.|...+.. +. .
T Consensus 366 lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~A 445 (540)
T PLN02787 366 LLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQA 445 (540)
T ss_pred EEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHH
Confidence 999999999999999999999988653 2344455567789999999999999999999999887653 33 3
Q ss_pred HHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 354 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 354 ~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+.+.+|-. .++..+.-+-.+||++|++|+.+++.++..|++.
T Consensus 446 i~~~Fg~~-~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g 487 (540)
T PLN02787 446 LMRCFGQN-PELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTG 487 (540)
T ss_pred HHHHhCCC-CCceeeCCCCCcCCCcccchHHHHHHHHHHHhcC
Confidence 33445532 2233333334588999999999999999888853
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.1e-17 Score=170.14 Aligned_cols=240 Identities=20% Similarity=0.240 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHHHHHcCCC---CCCCCcEEEEeccCCCc-----------cc--------------chHHHHHHHHcCCC
Q 013344 75 PDDLLAPVLKAVIEKTNVD---PSEVGDIVVGTVLAPGS-----------QR--------------ASECRMAAFYAGFP 126 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~---~~dId~vi~g~~~~~~~-----------~~--------------~~~a~~~~~~lGl~ 126 (445)
...|+..++++||+++|++ ++.+ .|++|+..+... .+ ..++..+...+|+
T Consensus 83 ~~~~~l~aa~~AledAg~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~- 160 (418)
T PRK07910 83 LQRMSTVLGRRVWENAGSPEVDTNRL-MVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA- 160 (418)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcccE-EEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC-
Confidence 3568899999999999973 3333 467777643221 00 0134445667777
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHH
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHR 206 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~ 206 (445)
..|.++++++|+|++.||..|+++|++|++|.+..... +.. ++. +....|.
T Consensus 161 -~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~--------~~~---------------~~~-----~~~~~f~ 211 (418)
T PRK07910 161 -KAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGV--------ETR---------------IEA-----VPIAGFA 211 (418)
T ss_pred -CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccc--------ccc---------------CCH-----HHHHHHH
Confidence 58899999999999999999999999999999821100 000 000 0000010
Q ss_pred HHHHHHHcCCcccccccceecccCCCCCCCCCeeec-----cCCCCCCCCCHHHHhcCCCcccC--CCccccCCCCCCCC
Q 013344 207 KAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTIS-----VDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSD 279 (445)
Q Consensus 207 ~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~-----~d~~~r~~~t~e~l~~~~p~~~~--~G~~t~~~~~~~~D 279 (445)
+. + .+++ +++. .+| |+. +|.+ ++|
T Consensus 212 ~~------~-----------------------~~ls~~~~~~~~~------------~rP-Fd~~~~G~v-------~gE 242 (418)
T PRK07910 212 QM------R-----------------------IVMSTNNDDPAGA------------CRP-FDKDRDGFV-------FGE 242 (418)
T ss_pred hc------C-----------------------CccccCCCCCCCC------------cCC-CcCCCCCEe-------eec
Confidence 00 0 0011 1111 344 443 3443 799
Q ss_pred CCeeEEeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----
Q 013344 280 GAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ---- 350 (445)
Q Consensus 280 GAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~---- 350 (445)
|++++||++.+.|++++.++++++.+++... ..|...+.++..+++++|+++|++++||||++.|.+++..
T Consensus 243 Gaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~ 322 (418)
T PRK07910 243 GGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVA 322 (418)
T ss_pred eEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHH
Confidence 9999999999999999999999999988754 2344455667799999999999999999999999988743
Q ss_pred HH-HHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 351 FV-YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 351 ~~-~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+. .+.+.+|-. ..+.+.-+-.+||+.|++|+.+++..+..|++.
T Consensus 323 E~~Al~~~fg~~--~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~ 367 (418)
T PRK07910 323 EGKAINNALGGH--RPAVYAPKSALGHSVGAVGAVESILTVLALRDG 367 (418)
T ss_pred HHHHHHHHhCCC--CCceeCccccccccHHHHHHHHHHHHHHHHhcC
Confidence 33 344445632 222333445689999999999999998888763
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.7e-18 Score=170.30 Aligned_cols=248 Identities=22% Similarity=0.296 Sum_probs=177.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCC-CCCCC---cEEEEeccCCCc----c-------c---------------chHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVD-PSEVG---DIVVGTVLAPGS----Q-------R---------------ASECRMAAFY 122 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~-~~dId---~vi~g~~~~~~~----~-------~---------------~~~a~~~~~~ 122 (445)
.....|+..|+.+||+++|++ ..+.+ .+++|+...... + + ...+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 456899999999999999997 33343 355666543322 0 0 0124556678
Q ss_pred cCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHH
Q 013344 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202 (445)
Q Consensus 123 lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~ 202 (445)
+|+ ..|.+++..+|+++.+||..|+++|+.|++|++-..- .+ --++.+.+..|..
T Consensus 149 ~g~--~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG-----~e------------------~~i~~~~i~gF~a 203 (412)
T COG0304 149 FGL--KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGG-----AE------------------AAITPLGIAGFEA 203 (412)
T ss_pred hCC--CCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcc-----cc------------------cccCHHHHHHHHH
Confidence 888 5899999999999999999999999999999982110 00 0122333333333
Q ss_pred HHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC--CCccccCCCCCCCCC
Q 013344 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSDG 280 (445)
Q Consensus 203 ~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~--~G~~t~~~~~~~~DG 280 (445)
.++... ..| .+++ .++| |+. +|++ +++|
T Consensus 204 ------m~Alst---------------------------~nd-~p~~--------asrP-fd~~RdGfv-------~gEG 233 (412)
T COG0304 204 ------MRALST---------------------------RND-DPEK--------ASRP-FDKNRDGFV-------IGEG 233 (412)
T ss_pred ------HHHhcc---------------------------CCC-Cccc--------cCCC-CCCCCCCEE-------Eecc
Confidence 111100 001 1111 1455 443 4655 8999
Q ss_pred CeeEEeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChH----HH
Q 013344 281 AGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS----QF 351 (445)
Q Consensus 281 AaAvvL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~----~~ 351 (445)
++++||++.++|+++|.++++++++++... ..|...+.+...+++.+|+++|++++||||+..|...+. .+
T Consensus 234 ag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E 313 (412)
T COG0304 234 AGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAE 313 (412)
T ss_pred eeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHH
Confidence 999999999999999999999999998653 456777888999999999999999999999999987664 44
Q ss_pred HHHHHH-cCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 352 VYCRNK-LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 352 ~~~~e~-LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
...+++ +|-...++..+..+-.+||++|+.|+.+.+..+..|+.
T Consensus 314 ~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~ 358 (412)
T COG0304 314 SLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRD 358 (412)
T ss_pred HHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhc
Confidence 455554 45444455566666678999999999999999999984
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=99.79 E-value=7e-18 Score=173.56 Aligned_cols=249 Identities=21% Similarity=0.251 Sum_probs=167.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCC-CC----cEEEEeccCCCc------------------c---c--chHHHHHHHHcCC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSE-VG----DIVVGTVLAPGS------------------Q---R--ASECRMAAFYAGF 125 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~d-Id----~vi~g~~~~~~~------------------~---~--~~~a~~~~~~lGl 125 (445)
....|+..++++||+++|+++++ ++ ++++|+...... . . ..++..++..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45789999999999999998877 55 466776532210 0 0 2345567778888
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
. +.|.++++++|+|+++||..|+++|++|++|++..... +. + +.+.+..|..
T Consensus 151 ~-~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~-----d~-----------------~--~~~~~~~f~~--- 202 (407)
T cd00828 151 S-HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGV-----ED-----------------P--LEEGLSGFAN--- 202 (407)
T ss_pred C-CCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccc-----cc-----------------c--ChHHHHHHHH---
Confidence 3 57999999999999999999999999999999821100 00 0 0000011110
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccC-CCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeE
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD-DGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAV 284 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d-~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAv 284 (445)
.+. +..+ +.+.. ..+| |+. ..+...++|||+++
T Consensus 203 --------~~~------------------------ls~~~~~~~~--------~~~p-fd~-----~~~G~~~gEGAaal 236 (407)
T cd00828 203 --------MGA------------------------LSTAEEEPEE--------MSRP-FDE-----TRDGFVEAEGAGVL 236 (407)
T ss_pred --------cCC------------------------CCCCCCCCCc--------ccCC-CcC-----CCCcEEeecceEEE
Confidence 000 0100 00000 1333 221 23444589999999
Q ss_pred EeeCHHHHHhcCCCeeEEEEEeEEeecCCCC----CCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHHHHH
Q 013344 285 LLMKRSVAMRKGLPILGVFRTFAAVGVDPAI----MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCRN 356 (445)
Q Consensus 285 vL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~----~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~~~~e 356 (445)
||++++.|++.+.++++++.+++........ .+.+...+++++|+++|++++||||++.|..++.. +...++
T Consensus 237 vLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~ 316 (407)
T cd00828 237 VLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIA 316 (407)
T ss_pred EEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHH
Confidence 9999999999999999999998875432222 23556799999999999999999999999888753 333333
Q ss_pred H-cCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 357 K-LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 357 ~-LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
. ++-...++..+.-+-.+||..+++|+.+++.++..|++.
T Consensus 317 ~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~ 357 (407)
T cd00828 317 EVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHG 357 (407)
T ss_pred HHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcC
Confidence 3 333223333333344588999999999999999999864
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.9e-19 Score=168.31 Aligned_cols=245 Identities=23% Similarity=0.370 Sum_probs=170.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCC---CCC----cEEEEeccCCCcc-------------------------cchHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPS---EVG----DIVVGTVLAPGSQ-------------------------RASECRMAAF 121 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~---dId----~vi~g~~~~~~~~-------------------------~~~~a~~~~~ 121 (445)
++..|++.|+++||+++++.+. +.| .|.+|+...+... -.+++.+++.
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 3567999999999999998665 333 5777766543310 0123556777
Q ss_pred HcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHH
Q 013344 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 201 (445)
Q Consensus 122 ~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a 201 (445)
.+|+ ..|.+.++++|++|..+|..+.++|+.|++|+..... . ..|..|.++ -|++|
T Consensus 173 ~~gl--~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGg-----s--E~~I~Plsl--------aGF~r------- 228 (440)
T KOG1394|consen 173 KYGL--RGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGG-----S--EACINPLSL--------AGFSR------- 228 (440)
T ss_pred hhcC--cCCchhhHhhhhhccchHHHHHHHHHhCccceeeccC-----c--ceeecchhh--------hhHHH-------
Confidence 8888 5899999999999999999999999999999871100 0 001112111 11111
Q ss_pred HHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC--CCccccCCCCCCCC
Q 013344 202 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSD 279 (445)
Q Consensus 202 ~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~--~G~~t~~~~~~~~D 279 (445)
.||.. ++-.||+ . .+|| |++ ||++ +++
T Consensus 229 ----~RALS---------------t~nd~P~----------------~--------aSRP-fD~~RdGFV-------mGE 257 (440)
T KOG1394|consen 229 ----ARALS---------------TRNDNPQ----------------K--------ASRP-FDKKRDGFV-------MGE 257 (440)
T ss_pred ----HHHhh---------------hcCCCcc----------------c--------cCCC-CccCCCcee-------ecc
Confidence 11110 0000111 0 1556 554 5665 899
Q ss_pred CCeeEEeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH---
Q 013344 280 GAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF--- 351 (445)
Q Consensus 280 GAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~--- 351 (445)
|++.+||++.|+|++++.+++++++||+..+ ..|+..|.+...+++++|+++||+|+||||+..|...+...
T Consensus 258 GagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~a 337 (440)
T KOG1394|consen 258 GAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAA 337 (440)
T ss_pred ceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccCcCchHH
Confidence 9999999999999999999999999998654 56888899999999999999999999999999998877642
Q ss_pred --HHHHHHcCCCCC--CcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 352 --VYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 352 --~~~~e~LGl~~~--~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..+...++--.. +++.+.| ++||-+|+.|+...+..+..++.
T Consensus 338 E~~Ai~~vf~~~~~~~~vsStKg--aiGHLLGAAGavEAi~Tv~ai~~ 383 (440)
T KOG1394|consen 338 EAEAIKRVFGEHNIASKVSSTKG--AIGHLLGAAGAVEAIFTVLAIND 383 (440)
T ss_pred HHHHHHHHhccCCcccccccccc--hhhhhcccccchhhHhhhhhhhc
Confidence 222333332222 4666555 46899999999998877777664
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.6e-18 Score=175.30 Aligned_cols=248 Identities=15% Similarity=0.157 Sum_probs=157.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEec-CcCcHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAI 152 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~-~~CsSgl~Al~~A~~~I 152 (445)
...++...|+++||+++|++|+|||.||+.+ +++.. .+..+..++.++|++.++.+++++ .+|++|+.||..|.+++
T Consensus 175 Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~-S~~~~-~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL 252 (511)
T PLN02192 175 EAETVMFGAIDQLLAKTSVKPKDIGILIVNC-SLFNP-TPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLL 252 (511)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEC-CCCCC-CchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHH
Confidence 3568899999999999999999999998864 45543 345566677799997679999999 79999999999999999
Q ss_pred HcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCC
Q 013344 153 KAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPK 232 (445)
Q Consensus 153 ~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~ 232 (445)
+++....+-
T Consensus 253 ~a~~~~~aL----------------------------------------------------------------------- 261 (511)
T PLN02192 253 QVHPNSYAL----------------------------------------------------------------------- 261 (511)
T ss_pred HcCCCCeEE-----------------------------------------------------------------------
Confidence 998765541
Q ss_pred CCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhc-CCCeeEEEEEeEE---
Q 013344 233 TGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK-GLPILGVFRTFAA--- 308 (445)
Q Consensus 233 ~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~-g~~~~~~i~~~~~--- 308 (445)
+|+.+. +| ..+.+..+ .-+.-..+.++|||+|+||.+....+.. ..... ..+....
T Consensus 262 -------VVstE~-----~S------~n~y~g~d-rs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~-~~vrt~~~~d 321 (511)
T PLN02192 262 -------VISMEN-----IT------LNWYFGND-RSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLV-HTVRTHKGAD 321 (511)
T ss_pred -------EEEEEe-----cc------ccCCCCCC-HHHHhccccccccceEEEEeccccccccccceee-eeEEEEecCC
Confidence 111100 00 00000000 0001111447999999999874211110 00111 0011100
Q ss_pred ------eecCCC---------------CCCccHHHH----------------------HHHHHHHcCCC---C---CCcc
Q 013344 309 ------VGVDPA---------------IMGVGPAVA----------------------IPAAVKSAGLQ---L---DDID 339 (445)
Q Consensus 309 ------~~~~p~---------------~~~~~~~~a----------------------i~~aL~~aGl~---~---~DID 339 (445)
...+.+ ..+...... -++.++ ..+. + .|||
T Consensus 322 d~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk-~~~~~~~p~~~~~Id 400 (511)
T PLN02192 322 DKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFK-MKLKPYIPDFKLAFE 400 (511)
T ss_pred hhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHH-HHhhhccHHHHHhhc
Confidence 000000 000000000 001111 0111 1 5899
Q ss_pred EEEecCCChHHHHHHHHHcCCCCC---CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccce
Q 013344 340 LFEINEAFASQFVYCRNKLGLDPE---KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMG 414 (445)
Q Consensus 340 ~~e~h~~~~~~~~~~~e~LGl~~~---~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~ 414 (445)
+|.+|+++..+...+.+.||++++ +...+. |.+|||++++++..|..+.+++.. +.|+.++. +|+|+.
T Consensus 401 hf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL------~rfGNTSSaSI~~aL~~~eakgri-k~GDrVl~iaFGsGf~ 473 (511)
T PLN02192 401 HFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTL------YRFGNTSSSSLWYELAYSEAKGRI-KKGDRTWQIAFGSGFK 473 (511)
T ss_pred eEeeccCCHHHHHHHHHHcCCCchhhhHHHHHH------hHcCChHHhHHHHHHHHHHHcCCC-CCCCEEEEEEEcchHh
Confidence 999999999999999999999974 444445 999999999999999999887765 77764433 899999
Q ss_pred eEEEEEEc
Q 013344 415 AAAVFERG 422 (445)
Q Consensus 415 ~a~~l~~~ 422 (445)
+++++.++
T Consensus 474 ~~sav~~~ 481 (511)
T PLN02192 474 CNSAVWKA 481 (511)
T ss_pred hhhhheee
Confidence 97777665
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.8e-17 Score=166.38 Aligned_cols=251 Identities=14% Similarity=0.114 Sum_probs=165.4
Q ss_pred EEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCce
Q 013344 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (445)
Q Consensus 52 v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~ 131 (445)
.++.+.+.+.+.. ...+++..+|+.+|++++|+++ +|++||.|++++.+++.. .+.++..+...||++..+++
T Consensus 30 ~~~~g~G~~~~~~----~~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~-~~s~a~~v~~~Lgl~~~~~~ 102 (379)
T TIGR01835 30 KFHIGIGQKKMAV----PPIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQ-SKAAAVYVHGLLGLQPFCRS 102 (379)
T ss_pred HHHhhcCceEEee----CCCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCceE
Confidence 4455555555543 2357788999999999999998 899999999999998865 45677888889999767899
Q ss_pred EEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Q 013344 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 211 (445)
Q Consensus 132 ~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a 211 (445)
++++++|+|++.||..|.++|++|..+.+
T Consensus 103 ~dv~~aC~gg~~aL~~A~~~i~s~~~~~a--------------------------------------------------- 131 (379)
T TIGR01835 103 FELKQACYGATAALQMAKGHVALSPDRKV--------------------------------------------------- 131 (379)
T ss_pred EEeccccHHHHHHHHHHHHHHHcCCCCeE---------------------------------------------------
Confidence 99999999999999999999999876554
Q ss_pred HHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHH
Q 013344 212 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 291 (445)
Q Consensus 212 ~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~ 291 (445)
++|..|- .+. .+ + ......++|||+|+||.....
T Consensus 132 ---------------------------LVv~~D~-a~~----------~~----~----~~~~~~~GdGA~A~Ll~~~~~ 165 (379)
T TIGR01835 132 ---------------------------LVIASDI-AKY----------GL----E----SPGEPTQGAGAVAMLVSADPK 165 (379)
T ss_pred ---------------------------EEEEeeh-hhc----------cc----C----CCCCccccCccEEEEEecCCC
Confidence 1111110 000 00 0 001122689999999986421
Q ss_pred HHhcCCCeeEEEE-E--eEEeec----CCC------CCCc--------cHHHHHHHHHHHcCCCCCCccEEEecCCChHH
Q 013344 292 AMRKGLPILGVFR-T--FAAVGV----DPA------IMGV--------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 350 (445)
Q Consensus 292 a~~~g~~~~~~i~-~--~~~~~~----~p~------~~~~--------~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~ 350 (445)
++ .+. . ..+... .|. ..+. ....++++.|+++|++++|||+|.+|++|..+
T Consensus 166 -------i~-~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~ 237 (379)
T TIGR01835 166 -------LL-AINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKM 237 (379)
T ss_pred -------ee-EEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcH
Confidence 11 111 0 101010 111 0111 12378889999999999999999999999887
Q ss_pred HH----HHHHHcCCCC-CCcCCC-CChhcccChhhhHHHHHHHHHHHHHHhcC-CCCceeeEEEeeccccee
Q 013344 351 FV----YCRNKLGLDP-EKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG-RDCRFGVISMCIGTGMGA 415 (445)
Q Consensus 351 ~~----~~~e~LGl~~-~~vn~~-gG~la~Gh~~GatG~~~i~~~l~~L~~~~-~~~~~G~~~~~~G~G~~~ 415 (445)
.. .+++.++++. +++... .-.+.+...+||+++++++..|..+.+++ .. +.|..+++++-|.|+
T Consensus 238 ~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~-~~Gd~ill~s~GsG~ 308 (379)
T TIGR01835 238 GLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFED-TTGDKIGLFSYGSGA 308 (379)
T ss_pred HHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccC-CCCCEEEEEEecCCc
Confidence 54 3445566653 111110 00111237899999999999999988765 33 667766654444443
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-16 Score=165.09 Aligned_cols=248 Identities=20% Similarity=0.190 Sum_probs=158.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCc------------------EEEEeccC---------------CC---c---ccch
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGD------------------IVVGTVLA---------------PG---S---QRAS 114 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~------------------vi~g~~~~---------------~~---~---~~~~ 114 (445)
....|+..++++||+++|+++.+++. ++.++... .. + .-..
T Consensus 74 ~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (425)
T PRK06501 74 LSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGS 153 (425)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccH
Confidence 35678899999999999996544321 11211110 00 0 0012
Q ss_pred HHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCH
Q 013344 115 ECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTR 194 (445)
Q Consensus 115 ~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisr 194 (445)
.+..++..+|+ +.|+++++.+|+|++.||..|+++|++|++|++.+... + ..++.
T Consensus 154 ~a~~i~~~~gl--~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~--------d---------------~~~~~ 208 (425)
T PRK06501 154 IADRLADRFGT--RGLPISLSTACASGATAIQLGVEAIRRGETDRALCIAT--------D---------------GSVSA 208 (425)
T ss_pred HHHHHHHHhCC--CCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeee--------c---------------ccCCH
Confidence 34556668898 58899999999999999999999999999998821100 0 00111
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCC
Q 013344 195 KEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNS 274 (445)
Q Consensus 195 e~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~ 274 (445)
+.+..+.... + +.. ..-.++. ..+| |+.+ .+.
T Consensus 209 ~~~~~~~~~~------~-----ls~-------------------~~~~~~~------------~~rp-fd~~-----r~G 240 (425)
T PRK06501 209 EALIRFSLLS------A-----LST-------------------QNDPPEK------------ASKP-FSKD-----RDG 240 (425)
T ss_pred HHHHHHHHhh------c-----ccc-------------------CCCCCCc------------ccCC-CCCC-----CCC
Confidence 1111111100 0 000 0000011 1344 4331 122
Q ss_pred CCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 013344 275 SQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS 349 (445)
Q Consensus 275 ~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~-----p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~ 349 (445)
..++||++++||++.+.+++.+.++++.+.+++..... +...+.....+++++|+++|++++||||++.|..++.
T Consensus 241 ~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p~dId~i~~Hgtgt~ 320 (425)
T PRK06501 241 FVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDYINAHGTSTP 320 (425)
T ss_pred eeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCccCc
Confidence 33799999999999999999999999999888764321 2222334568999999999999999999999998876
Q ss_pred HH----H-HHHHHcCCC--CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 350 QF----V-YCRNKLGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 350 ~~----~-~~~e~LGl~--~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.. . .+.+.+|-. .-+++..++.+ ||+.|++|+.+++..+..|++.
T Consensus 321 ~~d~~E~~al~~~~~~~~~~~pv~s~k~~~--Gh~~~AsG~~~~~~~~l~l~~~ 372 (425)
T PRK06501 321 ENDKMEYLGLSAVFGERLASIPVSSNKSMI--GHTLTAAGAVEAVFSLLTIQTG 372 (425)
T ss_pred chHHHHHHHHHHHhcccCCCcEEECCCccc--CCCchhhhHHHHHHHHHHHhcC
Confidence 42 2 222334422 12455555554 9999999999999999998864
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-16 Score=162.84 Aligned_cols=239 Identities=15% Similarity=0.077 Sum_probs=159.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCcc-------------------------------------cc
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ-------------------------------------RA 113 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~~-------------------------------------~~ 113 (445)
...|+..|+++||+++|+++.+.+ .|++|+..+.... ..
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 567999999999999999654332 4677776543100 00
Q ss_pred hHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCC
Q 013344 114 SECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVT 193 (445)
Q Consensus 114 ~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gis 193 (445)
.++..++..+|+ +.|.+++.++|+|++.||..|+++|++|++|++..... + -.++
T Consensus 153 ~~a~~is~~~gl--~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~-----d------------------~~~~ 207 (398)
T PRK06519 153 LLAGNISIVHKV--TGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGA-----Y------------------NAER 207 (398)
T ss_pred HHHHHHHHHhCC--CCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeee-----c------------------cccC
Confidence 234556778898 58999999999999999999999999999999821100 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCC
Q 013344 194 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGN 273 (445)
Q Consensus 194 re~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~ 273 (445)
. +. ...+... +. +.. .. .+|.|+... ...+
T Consensus 208 ~---~~--~~~~~~~------~~------------------------ls~-~~------------~~p~~d~~~--~~r~ 237 (398)
T PRK06519 208 P---DM--LLLYELG------GL------------------------LLK-GG------------WAPVWSRGG--EDGG 237 (398)
T ss_pred H---HH--HHHHHHc------Cc------------------------cCC-CC------------CCchhccCc--cCCC
Confidence 0 00 0000000 00 000 00 122232100 0112
Q ss_pred CCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH---
Q 013344 274 SSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ--- 350 (445)
Q Consensus 274 ~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~--- 350 (445)
...++||++++||++.+.|++.+.++++++.+++.... +. ...+...+++++|+++|+ ++||||++.|...+..
T Consensus 238 G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~-~~-~~~~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~ 314 (398)
T PRK06519 238 GFILGSGGAFLVLESREHAEARGARPYARISGVESDRA-RR-APGDLEASLERLLKPAGG-LAAPTAVISGATGAHPATA 314 (398)
T ss_pred CeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC-CC-ChHHHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccH
Confidence 22379999999999999999999999999999965332 22 234567899999999999 8999999999887643
Q ss_pred -HHHHHH-HcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 351 -FVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 351 -~~~~~e-~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+...++ .+++ +++... -.+||.+|++|+..++..+..|++.
T Consensus 315 ~E~~Ai~~~f~~---pvsS~K--s~~GH~l~AAGa~e~i~~~lal~~g 357 (398)
T PRK06519 315 EEKAALEAALAG---PVRGIG--TLFGHTMEAQFPLGLALAALSVSKG 357 (398)
T ss_pred HHHHHHHHHcCC---Cccccc--hhhccchHHHHHHHHHHHHHHHhcC
Confidence 333333 3452 344433 3578999999999999999999875
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.5e-17 Score=167.40 Aligned_cols=246 Identities=23% Similarity=0.265 Sum_probs=163.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeccCCCc---------------c---cchHHHHHHHHcCCCCCCce
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS---------------Q---RASECRMAAFYAGFPETVPV 131 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~----vi~g~~~~~~~---------------~---~~~~a~~~~~~lGl~~~~~~ 131 (445)
+..+|+.+|+++||+++|++++++|. +++|+..+++. . ...++..++..+|+ ..|.
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl--~g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL--RGPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC--CCCc
Confidence 35789999999999999999988875 77777543221 0 01244567778998 4799
Q ss_pred EEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Q 013344 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 211 (445)
Q Consensus 132 ~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a 211 (445)
++++.+|+|++.||..|+++|++|.+|++..... + ...+. .....+..
T Consensus 164 ~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~-----~------------------~~~~~-----~~~~~~~~---- 211 (421)
T cd00833 164 LTVDTACSSSLVALHLACQSLRSGECDLALVGGV-----N------------------LILSP-----DMFVGFSK---- 211 (421)
T ss_pred eeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeee-----e------------------ccCCH-----HHHHHHhh----
Confidence 9999999999999999999999999998821100 0 00000 00000000
Q ss_pred HHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHH
Q 013344 212 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 291 (445)
Q Consensus 212 ~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~ 291 (445)
.+. +..+.. .+| |+. ..+...++|||+++||++++.
T Consensus 212 --~~~------------------------l~~~~~------------~~p-f~~-----~~~g~~~geGAaalvL~~~~~ 247 (421)
T cd00833 212 --AGM------------------------LSPDGR------------CRP-FDA-----DADGYVRGEGVGVVVLKRLSD 247 (421)
T ss_pred --CCC------------------------CCCCCC------------CCC-CCC-----CCCCeeeeceEEEEEEeeHHH
Confidence 000 011100 222 211 122334799999999999999
Q ss_pred HHhcCCCeeEEEEEeEEeecCC-----CCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----HHH-HHHcCCC
Q 013344 292 AMRKGLPILGVFRTFAAVGVDP-----AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----VYC-RNKLGLD 361 (445)
Q Consensus 292 a~~~g~~~~~~i~~~~~~~~~p-----~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~~~-~e~LGl~ 361 (445)
+++.+.++++++.+++...... ...+.+...+++++|+++|++++|||++++|..++... ... .+.++-.
T Consensus 248 A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~ 327 (421)
T cd00833 248 ALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGS 327 (421)
T ss_pred HHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhcc
Confidence 9999989999998887643211 11234456899999999999999999999999876542 222 2223222
Q ss_pred ---CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 362 ---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 362 ---~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
..+++.+.-+-.+||+.|++|+.+++.++.+|++..
T Consensus 328 ~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ 366 (421)
T cd00833 328 RSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGV 366 (421)
T ss_pred CCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCC
Confidence 123333333445899999999999999999998754
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-16 Score=163.39 Aligned_cols=245 Identities=18% Similarity=0.195 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-----------cc--------------chHHHHHHHHcCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------QR--------------ASECRMAAFYAGF 125 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~-----------~~--------------~~~a~~~~~~lGl 125 (445)
...|+..++++||+++|++++.++ .|++|+..+... .+ ..++..++..+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 467899999999999999877654 577887553321 00 0124456678888
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
+.|.++++++|+|++.||..|+++|++|+ |.+..... +. .+ ..+....+
T Consensus 151 --~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~--------d~---------------~~-----~p~~~~~~ 199 (399)
T cd00832 151 --RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGV--------DS---------------AL-----CPWGWVAQ 199 (399)
T ss_pred --CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEee--------cc---------------cc-----CHHHHHHH
Confidence 58999999999999999999999999999 88721100 00 00 01111111
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEE
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvv 285 (445)
.+ .+. ++.++.+. ...+| |+.+ .+...++||++++|
T Consensus 200 ~~------~~~------------------------ls~~~~p~--------~~~rP-Fd~~-----~~G~~~gEGa~~lv 235 (399)
T cd00832 200 LS------SGR------------------------LSTSDDPA--------RAYLP-FDAA-----AAGYVPGEGGAILV 235 (399)
T ss_pred Hh------ccc------------------------cCCCCCCC--------CCcCC-CcCC-----CCCEeeeceEEEEE
Confidence 00 000 11110000 01444 4431 12233799999999
Q ss_pred eeCHHHHHhcCCCeeEEEEEeEEeecCCC--CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChH----HHHH-HHHHc
Q 013344 286 LMKRSVAMRKGLPILGVFRTFAAVGVDPA--IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS----QFVY-CRNKL 358 (445)
Q Consensus 286 L~s~~~a~~~g~~~~~~i~~~~~~~~~p~--~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~----~~~~-~~e~L 358 (445)
|++.+.|++.|.++++++.+++....... ..+.+...+++++|+++|++++||||++.|.+.+. .+.. +.+.+
T Consensus 236 Le~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~f 315 (399)
T cd00832 236 LEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVF 315 (399)
T ss_pred EeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHh
Confidence 99999999999999999999987542211 12445678999999999999999999999987664 3333 33345
Q ss_pred CCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 359 GLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 359 Gl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
|-. +++.+.-+-.+||+++++|+.+++.++..|+++
T Consensus 316 g~~--~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~ 351 (399)
T cd00832 316 GPR--GVPVTAPKTMTGRLYAGGAPLDVATALLALRDG 351 (399)
T ss_pred CCC--CCceeCCCchhcchHHHHHHHHHHHHHHHHhCC
Confidence 532 333333334579999999999999999988864
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.1e-16 Score=159.64 Aligned_cols=245 Identities=20% Similarity=0.230 Sum_probs=159.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeccCCCc--------------c-----------cchHHHHHHHHcCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS--------------Q-----------RASECRMAAFYAGF 125 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~----vi~g~~~~~~~--------------~-----------~~~~a~~~~~~lGl 125 (445)
...|+..|+++||+++|+++++++. +++|+...... . ...++..++..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 4789999999999999999888874 55554322110 0 01345567778898
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
+.|.+++.++|+|+++||..|+++|++|++|++..... + --++ .+....|
T Consensus 152 --~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~--------d---------------~~l~-----~~~~~~f 201 (406)
T PRK08439 152 --KGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGA--------E---------------SAIC-----PVGIGGF 201 (406)
T ss_pred --CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecc--------h---------------hccC-----HHHHHHH
Confidence 47899999999999999999999999999998721100 0 0000 0111111
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC--CCccccCCCCCCCCCCee
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSDGAGA 283 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~--~G~~t~~~~~~~~DGAaA 283 (445)
.+. +.+. ... .+++. ..+| |+. +|. .++||+++
T Consensus 202 ~~~------~~ls-------~~~------------~~p~~------------~~rp-fd~~~~G~-------v~gEGa~~ 236 (406)
T PRK08439 202 AAM------KALS-------TRN------------DDPKK------------ASRP-FDKDRDGF-------VMGEGAGA 236 (406)
T ss_pred HHh------Cccc-------cCC------------CCCcc------------CcCC-ccCCCCcE-------EeeCceEE
Confidence 100 0000 000 00011 1344 332 333 37999999
Q ss_pred EEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCC---CccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHHH-H
Q 013344 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM---GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYC-R 355 (445)
Q Consensus 284 vvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~---~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~~~-~ 355 (445)
+||++.+.|++.+.++++++.+++......... ..+...+++++|+++|+ +||||++.|...+.. +... .
T Consensus 237 lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~D~~E~~al~ 314 (406)
T PRK08439 237 LVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAALEMAGN--PKIDYINAHGTSTPYNDKNETAALK 314 (406)
T ss_pred EEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHHHHHcCC--CccCEEEccCCcCCCCCHHHHHHHH
Confidence 999999999999999999999887653211111 13556899999999999 899999999876653 3333 3
Q ss_pred HHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 356 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 356 e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+.+|-....+..+.-+-.+||..|++|+.+++..+..|+++
T Consensus 315 ~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~ 355 (406)
T PRK08439 315 ELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDG 355 (406)
T ss_pred HHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCC
Confidence 33443322222222223489999999999999999888864
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.6e-16 Score=157.71 Aligned_cols=245 Identities=17% Similarity=0.219 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHHHcCCCC-CCCC----cEEEEeccCCCc--------------c-----------cchHHHHHHHHcC
Q 013344 75 PDDLLAPVLKAVIEKTNVDP-SEVG----DIVVGTVLAPGS--------------Q-----------RASECRMAAFYAG 124 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~-~dId----~vi~g~~~~~~~--------------~-----------~~~~a~~~~~~lG 124 (445)
...|+..|+++||+++|++. ..++ +|++|+..+... . ...++..++..+|
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 46789999999999999843 2222 677887543210 0 0013455667888
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
+ +.|.+++.++|+|+++||..|+++|++|++|++..... +. ++......|..
T Consensus 153 ~--~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~-----d~-------------------~~~~~~~~f~~-- 204 (405)
T PRK09116 153 L--KGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGA-----EE-------------------LCPTEAAVFDT-- 204 (405)
T ss_pred C--CCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecc-----hh-------------------cChHHHHHHHH--
Confidence 8 58999999999999999999999999999999822100 00 00000000000
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeE
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAV 284 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAv 284 (445)
..+... . ...++. ..+| |+. ..+...++||++++
T Consensus 205 ----l~~~~~---~---------------------~~~~~~------------~~rP-fd~-----~~~G~v~gEGa~~~ 238 (405)
T PRK09116 205 ----LFATST---R---------------------NDAPEL------------TPRP-FDA-----NRDGLVIGEGAGTL 238 (405)
T ss_pred ----hhhhcc---C---------------------CCCCCC------------CCCC-CcC-----CCCCEeeeccEEEE
Confidence 000000 0 000011 1344 432 12223379999999
Q ss_pred EeeCHHHHHhcCCCeeEEEEEeEEeecCCCC---CCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HH-HHHH
Q 013344 285 LLMKRSVAMRKGLPILGVFRTFAAVGVDPAI---MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FV-YCRN 356 (445)
Q Consensus 285 vL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~---~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~-~~~e 356 (445)
||++.+.|+++|.++++++.+++........ ...+...+++++|+++|++++||||++.|...+.. +. .+.+
T Consensus 239 vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~ 318 (405)
T PRK09116 239 VLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAA 318 (405)
T ss_pred EEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHH
Confidence 9999999999999999999998875422111 22345689999999999999999999999877742 32 3344
Q ss_pred HcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 357 KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 357 ~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+|- +++.+.-+-.+||..|++|+.+++..+..|++.
T Consensus 319 ~fg~---~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~ 355 (405)
T PRK09116 319 VFGA---RMPISSLKSYFGHTLGACGALEAWMSIEMMNEG 355 (405)
T ss_pred HhCC---CCeeECcchhhcccHHHHHHHHHHHHHHHHHcC
Confidence 4552 233333344589999999999999999888764
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.4e-15 Score=153.13 Aligned_cols=242 Identities=14% Similarity=0.203 Sum_probs=157.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc---------------c-----------cchHHHHHHHHcC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS---------------Q-----------RASECRMAAFYAG 124 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~---------------~-----------~~~~a~~~~~~lG 124 (445)
...++..|+++||+++|+++++++ ++++|+..+... . ...++..++..+|
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 567899999999999999765544 467776433210 0 0124556777889
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
+ +.|.++++++|+|++.||..|+++|++|++|++..... +. ++. ... ..
T Consensus 151 l--~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~-----d~-------------------~~~---~~~--~~ 199 (406)
T PRK07967 151 I--KGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGG-----EE-------------------LDW---EMS--CL 199 (406)
T ss_pred C--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeee-----cc-------------------cCh---HHH--HH
Confidence 8 58999999999999999999999999999999821100 00 000 000 00
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC--CCccccCCCCCCCCCCe
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSDGAG 282 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~--~G~~t~~~~~~~~DGAa 282 (445)
|.. ..+... .+. .+++.. .+| |+. +|.+ ++||++
T Consensus 200 f~~-~~~ls~-~~~----------------------~~p~~~------------~rP-Fd~~r~G~v-------~gEGaa 235 (406)
T PRK07967 200 FDA-MGALST-KYN----------------------DTPEKA------------SRA-YDANRDGFV-------IAGGGG 235 (406)
T ss_pred HHH-hhhhcc-CCC----------------------CCCCcC------------CcC-CcCCCCcee-------eeceEE
Confidence 000 000000 000 001111 344 433 3443 799999
Q ss_pred eEEeeCHHHHHhcCCCeeEEEEEeEEeecCCC---CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChH----HHHH-H
Q 013344 283 AVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA---IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS----QFVY-C 354 (445)
Q Consensus 283 AvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~---~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~----~~~~-~ 354 (445)
++||++.+.|++.+.++++++.+++....... ..+.+..++++++|+.++ + ||||++.|...+. .+.. +
T Consensus 236 ~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~Al~~~~--~-~Idyi~aHgtGT~~~D~~E~~Ai 312 (406)
T PRK07967 236 VVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMALATVD--T-PIDYINTHGTSTPVGDVKELGAI 312 (406)
T ss_pred EEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHhCCC--C-CccEEEcCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999987542111 134556789999998654 5 9999999987664 3333 3
Q ss_pred HHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 355 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 355 ~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.+|- +.++.+.-+-.+||.+|++|+..++..+..|+++
T Consensus 313 ~~~fg~--~~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~ 352 (406)
T PRK07967 313 REVFGD--KSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHG 352 (406)
T ss_pred HHHhCC--CCCeeECcccccccCccccchHHHHHHHHHHhcC
Confidence 344553 2223333334588999999999999998888764
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.9e-16 Score=160.31 Aligned_cols=253 Identities=18% Similarity=0.212 Sum_probs=156.2
Q ss_pred CCHHHHHHH-HHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecC-cCcHHHHHHHHHHH
Q 013344 73 TYPDDLLAP-VLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNR-QCSSGLQAVADVAA 150 (445)
Q Consensus 73 ~~~~eLa~~-Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~-~CsSgl~Al~~A~~ 150 (445)
....||+.. |++++|+++|++|+|||.||+ ++++... .+..+..+..++|++.++..++++. +|++++.+|..|.+
T Consensus 131 ~~e~em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~-~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ 208 (466)
T PLN00415 131 RHESELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNP-NPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATN 208 (466)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCC-CchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHH
Confidence 345566655 777889999999999998885 5565543 3445566677999987899999996 99999999999999
Q ss_pred HHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccC
Q 013344 151 AIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVD 230 (445)
Q Consensus 151 ~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~ 230 (445)
+++++....+-
T Consensus 209 ll~a~~~~~aL--------------------------------------------------------------------- 219 (466)
T PLN00415 209 LLKANPNTYAV--------------------------------------------------------------------- 219 (466)
T ss_pred HHHhCCCCEEE---------------------------------------------------------------------
Confidence 99987654441
Q ss_pred CCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCe-eEEEEEeEE-
Q 013344 231 PKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPI-LGVFRTFAA- 308 (445)
Q Consensus 231 ~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~-~~~i~~~~~- 308 (445)
+|..+- +. ...++.+..-+.-..+.++|||+|+||.+....+. ..+. +-.++....
T Consensus 220 ---------VVs~E~-~S-----------~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~-~~~~~L~~~vrt~~~ 277 (466)
T PLN00415 220 ---------IVSTEN-MT-----------LSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRV-RSKYELTHIVRTHKG 277 (466)
T ss_pred ---------EEEEec-cc-----------ccccCCCcHhHhccceeecccceEEEEecCccccc-CccceeeeEEEecCC
Confidence 111100 00 00000000000111234799999999987532111 1111 111222111
Q ss_pred ----------eecCCC-CCCcc-----HH---HHHHHH-------------------------HHHcCCCC--CC----c
Q 013344 309 ----------VGVDPA-IMGVG-----PA---VAIPAA-------------------------VKSAGLQL--DD----I 338 (445)
Q Consensus 309 ----------~~~~p~-~~~~~-----~~---~ai~~a-------------------------L~~aGl~~--~D----I 338 (445)
...+.. ..+.. |. ++++.. +-+..+++ .| +
T Consensus 278 ~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~ 357 (466)
T PLN00415 278 SSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCF 357 (466)
T ss_pred CChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccccc
Confidence 001100 00100 10 111110 10112333 23 8
Q ss_pred cEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeE--EEeecccceeE
Q 013344 339 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI--SMCIGTGMGAA 416 (445)
Q Consensus 339 D~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~--~~~~G~G~~~a 416 (445)
++|.+|.....+...+.+.||++++.+-++.-.| |.+|||++.+|+..|..+++++.. +.|.. .+.+|+|+.+.
T Consensus 358 ~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL---~r~GN~SSsSV~yvL~~~~~~~~~-~~Gdrvl~iaFGpGf~~e 433 (466)
T PLN00415 358 KHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTL---HRFGNTSSSSLWYELAYVEAKCRV-KRGDRVWQLAFGSGFKCN 433 (466)
T ss_pred eeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHH---HHhCCchhhhHHHHHHHHHhhccC-CCCCEEEEEEEcCcchhh
Confidence 8999999999999999999999998887776655 889999999999999999865543 44542 23399999986
Q ss_pred EEEEEc
Q 013344 417 AVFERG 422 (445)
Q Consensus 417 ~~l~~~ 422 (445)
+++.+.
T Consensus 434 s~v~~~ 439 (466)
T PLN00415 434 SIVWRA 439 (466)
T ss_pred HhHHHH
Confidence 666544
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.3e-16 Score=146.39 Aligned_cols=254 Identities=17% Similarity=0.172 Sum_probs=175.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEec-CcCcHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAI 152 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~-~~CsSgl~Al~~A~~~I 152 (445)
....|.++|.++||+.+++.|+|||.|++.++++-.. +.+-..+...|||++++..+.+. .+|++|..++..|.++.
T Consensus 75 ~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~--Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ 152 (356)
T COG3424 75 EAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLAT--PSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYC 152 (356)
T ss_pred HHHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccC--CChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHH
Confidence 3567999999999999999999999999999876543 23334455699998888888775 78999999999999999
Q ss_pred HcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCC
Q 013344 153 KAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPK 232 (445)
Q Consensus 153 ~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~ 232 (445)
++....++.+ .--|++.++.+..
T Consensus 153 ra~P~~~vlv------------------------------------------------------V~vELCSLt~~~~--- 175 (356)
T COG3424 153 RAAPDANVLV------------------------------------------------------VCVELCSLTYVFA--- 175 (356)
T ss_pred hhCccceEEE------------------------------------------------------EEeeeeeeeeecC---
Confidence 9875433300 0001111111110
Q ss_pred CCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeE-EEEEeEEeec
Q 013344 233 TGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILG-VFRTFAAVGV 311 (445)
Q Consensus 233 ~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~-~i~~~~~~~~ 311 (445)
|+ +.. ..-..+.++||+||+|++....++. ..+.. .+.+..+.-.
T Consensus 176 -----------d~-t~s--------------------~lVgtaLF~DG~AA~vv~gd~~~~~--~~~~~p~i~~s~StL~ 221 (356)
T COG3424 176 -----------DD-TKS--------------------NLVGTALFGDGAAAVVVSGDRRAEG--KRPLRPDILDSFSTLY 221 (356)
T ss_pred -----------CC-Ccc--------------------cceeeeeecCCeeEEEEeccccccc--cCCCCceecccccccC
Confidence 10 000 0113455899999999987443222 11111 1222211100
Q ss_pred C-----------------------CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCC
Q 013344 312 D-----------------------PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVN 368 (445)
Q Consensus 312 ~-----------------------p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~ 368 (445)
+ |..........+..+|...|++.+||+.|..|....++.....+.|||+++.+..+
T Consensus 222 ~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s 301 (356)
T COG3424 222 PDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVIDAYEESLGLSPEALELS 301 (356)
T ss_pred CccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCCCchHHHHHHHhcCCCHHHHHHH
Confidence 0 11111223578889999999999999999999999999999999999999988776
Q ss_pred CChhcccChhhhHHHHHHHHHHHHHHhcCC-CCceeeEEEeecccceeEEEEEEccc
Q 013344 369 GGALAIGHPLGTTGARCVATLLHEMKRRGR-DCRFGVISMCIGTGMGAAAVFERGDC 424 (445)
Q Consensus 369 gG~la~Gh~~GatG~~~i~~~l~~L~~~~~-~~~~G~~~~~~G~G~~~a~~l~~~~~ 424 (445)
.-.| ..+||.++++++..|..+.++.. ...+|+... +|.|++.-.+|.++.+
T Consensus 302 ~~~L---~~~GNMSSatvLfVL~d~l~~~~~~g~~Gl~~A-~GPGf~sElvL~~w~~ 354 (356)
T COG3424 302 WDVL---REYGNMSSATVLFVLEDTLQKAPKSGSRGLMFA-MGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHH---HHhCCccchhhHHHHHHHHHhcCCCCcceeeee-cCCcceeeeeeEEeec
Confidence 6555 56899999999999988876632 125666555 7999999988888754
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.7e-15 Score=145.27 Aligned_cols=233 Identities=19% Similarity=0.265 Sum_probs=162.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHH
Q 013344 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (445)
Q Consensus 71 ~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~ 150 (445)
.++....|+++|++.+|+++++||++|+.|++|+-+++.. .-..+..++..+|+++.+.++++..+|-+|..||+.|..
T Consensus 47 ~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~-~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~ 125 (377)
T COG3425 47 WDEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDA-VKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIG 125 (377)
T ss_pred CchhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCccc-ccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHH
Confidence 4688899999999999999999999999999999888775 444677888899999889999999999999999999999
Q ss_pred HHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccC
Q 013344 151 AIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVD 230 (445)
Q Consensus 151 ~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~ 230 (445)
+|.+|..+.+
T Consensus 126 ~v~s~~~~~~---------------------------------------------------------------------- 135 (377)
T COG3425 126 WVESGMISYG---------------------------------------------------------------------- 135 (377)
T ss_pred HHHcCCccce----------------------------------------------------------------------
Confidence 9999975422
Q ss_pred CCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEee
Q 013344 231 PKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG 310 (445)
Q Consensus 231 ~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~ 310 (445)
.++..|--...+- +.+..+ .++|++|+|+.... .+.+..-+.....
T Consensus 136 --------LvI~sD~a~~~~~------------------~~~E~t-~GAGavA~lIg~n~-------~~~a~~~~~~syt 181 (377)
T COG3425 136 --------LVIGADTAQYAPG------------------DALEYT-AGAGAVAFLIGKNP-------PIVAEFEGTGSYT 181 (377)
T ss_pred --------EEEeehhhccCCC------------------cccCcc-CCCceEEEEEccCC-------CeEEEecCceEEe
Confidence 1222221100000 001111 47899999998731 1222222222221
Q ss_pred cC------CCCC------C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCC
Q 013344 311 VD------PAIM------G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGG 370 (445)
Q Consensus 311 ~~------p~~~------~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG 370 (445)
.+ |... + .....+.+..+++.|++++|+|++.+|++|..+....++.|++..+++-++.-
T Consensus 182 ~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~ 261 (377)
T COG3425 182 TDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLV 261 (377)
T ss_pred cCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCchHHHHHHHhCccHhhcCccch
Confidence 11 1111 1 01247888999999999999999999999999999999999999888877653
Q ss_pred hhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccc
Q 013344 371 ALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGM 413 (445)
Q Consensus 371 ~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~ 413 (445)
.. .-.||+.+.++...|..+.++.+ ..|..+++ .|.|.
T Consensus 262 ~~---~~vGN~YtgS~~L~Las~L~~a~--~~G~rIl~~SYGSGa 301 (377)
T COG3425 262 YP---QRIGNTYTGSLLLGLASLLDNAK--LPGDRILLFSYGSGA 301 (377)
T ss_pred hh---hhcCcccchhHHHHHHHHHhhcC--CCCCEEEEEeeCCCc
Confidence 22 23566666666666655554433 34554444 45553
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=173.85 Aligned_cols=241 Identities=17% Similarity=0.169 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-----------------------------------------
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS----------------------------------------- 110 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~----------------------------------------- 110 (445)
..|+.+++++||++||+.++ ++ +|++|+...+..
T Consensus 94 qrl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (2582)
T TIGR02813 94 QLLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHW 172 (2582)
T ss_pred HHHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhccccccc
Confidence 35889999999999999543 33 577776432110
Q ss_pred -----c---cchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhH
Q 013344 111 -----Q---RASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGV 181 (445)
Q Consensus 111 -----~---~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~ 181 (445)
. ....+..++..+|| ++|.++|+++|+|++.||.+|++.|++|++|++.... ...
T Consensus 173 ~~~~~~g~~~n~~A~RIS~~f~L--~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~-------------- 236 (2582)
T TIGR02813 173 EENSFPGSLGNVISGRIANRFDL--GGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTD-------------- 236 (2582)
T ss_pred CccccccccccHHHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceee--------------
Confidence 0 01235567778898 5899999999999999999999999999999982210 000
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
.+. +....|.+. -.+++++.+ +|
T Consensus 237 ----------~~p-----~~~~~fs~~------------------------------~~lS~~g~c------------rp 259 (2582)
T TIGR02813 237 ----------NSP-----FMYMSFSKT------------------------------PAFTTNEDI------------QP 259 (2582)
T ss_pred ----------CCH-----HHHHHHHhc------------------------------cCcCCCCCc------------cC
Confidence 000 000001000 012333333 33
Q ss_pred cccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCC--CC---CCccHHHHHHHHHHHcCCCCC
Q 013344 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP--AI---MGVGPAVAIPAAVKSAGLQLD 336 (445)
Q Consensus 262 ~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p--~~---~~~~~~~ai~~aL~~aGl~~~ 336 (445)
|+. ..|...++||++++||.+.+.|++.|.++++.|.|++.....- .. ...+...+++++|+++|++++
T Consensus 260 -FD~-----~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~~Al~~Agi~p~ 333 (2582)
T TIGR02813 260 -FDI-----DSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKRAYDDAGFAPH 333 (2582)
T ss_pred -CCC-----CCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHcCCCHH
Confidence 443 1222337999999999999999999999999999998754221 11 123456899999999999999
Q ss_pred CccEEEecCCChHH----HH-HHHHHcCCCC---CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 337 DIDLFEINEAFASQ----FV-YCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 337 DID~~e~h~~~~~~----~~-~~~e~LGl~~---~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
||||+|.|...+.. +. .+.+.++-.. .++....-+-.+||..+++|+..++.++..|+++
T Consensus 334 ~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~ 401 (2582)
T TIGR02813 334 TCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHK 401 (2582)
T ss_pred HCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcC
Confidence 99999999887653 22 3334455322 2343333344589999999999999999988754
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.63 E-value=4e-15 Score=153.22 Aligned_cols=97 Identities=16% Similarity=0.192 Sum_probs=79.1
Q ss_pred eeccccCCCC-CCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHH---HHcCCCCCCceEEe
Q 013344 59 RTALCKSKRG-GFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA---FYAGFPETVPVRTV 134 (445)
Q Consensus 59 rT~~~~~~~G-~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~---~~lGl~~~~~~~~v 134 (445)
+|+++.+++. ...+++..+|++.|++.+|+++|++|++||.|++++.+++.. .+..+..+. ..+|.+ ++.++++
T Consensus 36 ~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~-~ps~A~~v~~ll~~LG~~-~~~afDi 113 (459)
T PLN02577 36 TIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEESGNT-DIEGVDS 113 (459)
T ss_pred hhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCchHHHHHHHHHHhCCC-CcEEeeh
Confidence 4666655431 235789999999999999999999999999999999999765 334444443 366775 6899999
Q ss_pred cCcCcHHHHHHHHHHHHHHcCCC
Q 013344 135 NRQCSSGLQAVADVAAAIKAGFY 157 (445)
Q Consensus 135 ~~~CsSgl~Al~~A~~~I~sG~~ 157 (445)
+.+|.|++.||..|.++|++|..
T Consensus 114 ~~AC~G~~~AL~~A~~~i~sg~~ 136 (459)
T PLN02577 114 TNACYGGTAALLNCVNWVESSSW 136 (459)
T ss_pred hhhhHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999863
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.9e-14 Score=137.66 Aligned_cols=224 Identities=23% Similarity=0.307 Sum_probs=145.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHH
Q 013344 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAA 151 (445)
Q Consensus 72 ~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~ 151 (445)
+....+|+.+|+++||+++||+++|||.+++|+. ++.. .++..++..+|+ |.++++.+|+|++.||..|+.+
T Consensus 47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~Q~---~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~l 118 (327)
T TIGR02845 47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LNQI---ITANFVARDLGI----PFLGLYGACSTSMETLALGAML 118 (327)
T ss_pred chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CCcc---cHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999974 3322 467777788887 5699999999999999999999
Q ss_pred HHcCCCCeEe-c-CccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceeccc
Q 013344 152 IKAGFYDIGS-V-NPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIV 229 (445)
Q Consensus 152 I~sG~~~~v~-~-~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~ 229 (445)
|++|.++++. . ++++.. +|+ .|
T Consensus 119 I~SG~ad~VLVV~Ssh~S~--------------AEr------------------------------qf------------ 142 (327)
T TIGR02845 119 VDGGFADRVLAATSSHYAT--------------AER------------------------------QF------------ 142 (327)
T ss_pred HhCCCCCEEEEEEecccch--------------hhh------------------------------hc------------
Confidence 9999999881 1 111100 000 00
Q ss_pred CCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCC----eeEEEEE
Q 013344 230 DPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLP----ILGVFRT 305 (445)
Q Consensus 230 ~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~----~~~~i~~ 305 (445)
|.++ ++|..+...+.-++|||+|+||.+.+. +.+ ..|+++.
T Consensus 143 ------------------r~p~-------------eyg~q~~~ta~~tgdGAGA~vl~~~~~----~~~i~~~t~gkv~d 187 (327)
T TIGR02845 143 ------------------RYPT-------------EYGVQKPPTAQWTVTGAGAVLLASTGG----GPRITSATIGKVVD 187 (327)
T ss_pred ------------------cccc-------------ccccCCCCeeeEEEcccEEEEEeecCC----CCceEEEEEEEEEe
Confidence 0000 011111222333789999999987531 222 2356666
Q ss_pred eEEeecCCCCCCcc--H--HHHHHHHHHHcCCCCCCccEEEecCCChH---HHHHHHHHcCCCCCCcCCCCChhcc----
Q 013344 306 FAAVGVDPAIMGVG--P--AVAIPAAVKSAGLQLDDIDLFEINEAFAS---QFVYCRNKLGLDPEKINVNGGALAI---- 374 (445)
Q Consensus 306 ~~~~~~~p~~~~~~--~--~~ai~~aL~~aGl~~~DID~~e~h~~~~~---~~~~~~e~LGl~~~~vn~~gG~la~---- 374 (445)
++. .+|..||.+ | ..-|.+-|++.|.+|+|.|++..-|-... +...++++-|++.++....=|.+-+
T Consensus 188 ~g~--~d~~nmgaamapaa~dti~~h~~d~~~~~~~yd~i~tgdlg~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~ 265 (327)
T TIGR02845 188 YGI--TDPLDMGAAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQ 265 (327)
T ss_pred cCC--CCcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEecchHHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCC
Confidence 654 377788754 3 46788899999999999999998876544 3334444445543211111111110
Q ss_pred -----cChhhhHHHHHHHHHHHHHHhc
Q 013344 375 -----GHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 375 -----Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
|--.|++.....-.++.+|++.
T Consensus 266 ~~~aggsgc~csa~v~~~~~~~~~~~g 292 (327)
T TIGR02845 266 QVFAGGSGCACSAVVTYGHILKEMLRG 292 (327)
T ss_pred cccCCCcccchhHHHHHHHHHHHHhcC
Confidence 2334666666666677777654
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.4e-13 Score=135.63 Aligned_cols=192 Identities=20% Similarity=0.295 Sum_probs=122.2
Q ss_pred HHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCH
Q 013344 115 ECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTR 194 (445)
Q Consensus 115 ~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisr 194 (445)
++..++..+|+ +.|.++++.+|+|++.||..|+++|++|++|++..... + . +++
T Consensus 139 ~a~~ia~~lgl--~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~-----d---~----------------~~~ 192 (392)
T PRK09185 139 LADFLRAYLGL--SGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGV-----D---S----------------LCR 192 (392)
T ss_pred HHHHHHHHhCC--CCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeec-----c---c----------------cCh
Confidence 45566778898 47999999999999999999999999999998822100 0 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCC
Q 013344 195 KEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNS 274 (445)
Q Consensus 195 e~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~ 274 (445)
.....+... + .+. .+. .+| |+.+ .+.
T Consensus 193 -----~~~~~~~~~------~------------------------~l~-~~~------------~~P-fd~~-----~~G 218 (392)
T PRK09185 193 -----LTLNGFNSL------E------------------------SLS-PQP------------CRP-FSAN-----RDG 218 (392)
T ss_pred -----HHHHHHHhc------c------------------------ccC-CCc------------cCC-CcCC-----CCc
Confidence 000000000 0 000 000 223 2221 122
Q ss_pred CCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeec-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 013344 275 SQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS 349 (445)
Q Consensus 275 ~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~-----~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~ 349 (445)
..++||++++||+++. +. ..++.+++.... .|...+.+...+++++|+++|++++|||+++.|..++.
T Consensus 219 ~~~gEGaa~vVLe~~~-----~~--~~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~ 291 (392)
T PRK09185 219 INIGEAAAFFLLERED-----DA--AVALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATP 291 (392)
T ss_pred cceeceEEEEEEEEcC-----CC--cEEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCc
Confidence 3379999999999861 22 235667665421 13333445578999999999999999999999998875
Q ss_pred ----HHHHHH-HHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 350 ----QFVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 350 ----~~~~~~-e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+...+ +.+|- ..+++...+ .+||+.+++|+.+++.++..|++.
T Consensus 292 ~~D~~E~~al~~~f~~-~~pv~s~K~--~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 292 LNDAMESRAVAAVFGD-GVPCSSTKG--LTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred CCCHHHHHHHHHHhCC-CCceeCCCc--ccccChhhcchHHHHHHHHHHhcC
Confidence 333333 33442 223443333 369999999999999999999764
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.3e-13 Score=130.10 Aligned_cols=224 Identities=21% Similarity=0.310 Sum_probs=143.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHH
Q 013344 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAA 151 (445)
Q Consensus 72 ~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~ 151 (445)
+....+|+.+|+++||+++||+++|||.+++|+... . ..++..++..+|+ |+++|+.+|+|+..+|.+|+.+
T Consensus 53 EkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~-Q---~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~l 124 (337)
T PRK08304 53 EKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN-Q---IISANFAARELGI----PFLGLYGACSTMMESLALGSML 124 (337)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC-C---cchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHH
Confidence 567789999999999999999999999999997532 2 1456667778876 7999999999999999999999
Q ss_pred HHcCCCCeEe-c-CccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceeccc
Q 013344 152 IKAGFYDIGS-V-NPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIV 229 (445)
Q Consensus 152 I~sG~~~~v~-~-~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~ 229 (445)
|++|.++++. . ++++.. +| + .|+. |.+
T Consensus 125 I~SG~ad~VLVV~Ssh~s~--------------ae------------------r------------qfr~---P~e---- 153 (337)
T PRK08304 125 IDGGFADRVLAATSSHFAT--------------AE------------------R------------QFRF---PTE---- 153 (337)
T ss_pred HhcCCCCEEEEEEcchhhh--------------hh------------------h------------hccC---chh----
Confidence 9999999882 1 111100 00 0 1110 110
Q ss_pred CCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCC----eeEEEEE
Q 013344 230 DPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLP----ILGVFRT 305 (445)
Q Consensus 230 ~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~----~~~~i~~ 305 (445)
+..-+|.. +.-..|||+|+||.+.. .+.+ ..|+++.
T Consensus 154 --------------------------yg~qrp~t----------aqwtvtGAGA~i~~~~~----~~~~i~~~t~Gkv~D 193 (337)
T PRK08304 154 --------------------------YGGQRPPT----------AQWTVTGAGAVLLSREG----SGPRITHATIGKVVD 193 (337)
T ss_pred --------------------------ccccCCCc----------ceEEeeccEEEEEecCC----CCceEEEEeEEEEEe
Confidence 00111111 11157899999998642 1222 2355555
Q ss_pred eEEeecCCCCCCcc--H--HHHHHHHHHHcCCCCCCccEEEecCCChH---HHHHHHHHcCCCCCCcCCCCChhcc----
Q 013344 306 FAAVGVDPAIMGVG--P--AVAIPAAVKSAGLQLDDIDLFEINEAFAS---QFVYCRNKLGLDPEKINVNGGALAI---- 374 (445)
Q Consensus 306 ~~~~~~~p~~~~~~--~--~~ai~~aL~~aGl~~~DID~~e~h~~~~~---~~~~~~e~LGl~~~~vn~~gG~la~---- 374 (445)
++. .+|..||.+ | ..-|.+-|++.|.+|+|.|++..-|-... +...++++-|++.+.....=|.+-+
T Consensus 194 ~g~--~d~~nmgaaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~ 271 (337)
T PRK08304 194 LGI--KDPNDMGAAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLGRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQ 271 (337)
T ss_pred cCC--CCcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEEcchHHHHHHHHHHHHHHhCCChhhcccccCeEEeccCC
Confidence 554 367778754 3 46788899999999999999998876544 3334444446654211111111111
Q ss_pred ------cChhhhHHHHHHHHHHHHHHhc
Q 013344 375 ------GHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 375 ------Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
|--.|++.....-.++.+|++.
T Consensus 272 q~~~aGgSGc~csa~v~~~~~~~~~~~g 299 (337)
T PRK08304 272 QDVFAGGSGCACSAVVTYGYLLKELQKG 299 (337)
T ss_pred CcccCCCcccchhHHHHHHHHHHHHhcC
Confidence 1334666666666677777654
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.6e-13 Score=153.38 Aligned_cols=240 Identities=21% Similarity=0.226 Sum_probs=167.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCccc------------------chHHHHHHHHcCCCCCCceEE
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQR------------------ASECRMAAFYAGFPETVPVRT 133 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~~~------------------~~~a~~~~~~lGl~~~~~~~~ 133 (445)
..|..+.+.+||++||+.|..+. +|+.|....++... ...+..++..+++ ++|.+.
T Consensus 92 qRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l--~GPs~~ 169 (1061)
T COG3321 92 QRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL--SGPSVT 169 (1061)
T ss_pred HhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC--CCCCcc
Confidence 34999999999999999999888 57888776666411 1245566778999 689999
Q ss_pred ecCcCcHHHHHHHHHHHHHHcCCCCeEecCcc-chhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Q 013344 134 VNRQCSSGLQAVADVAAAIKAGFYDIGSVNPK-VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 212 (445)
Q Consensus 134 v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~-~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~ 212 (445)
|+++|||++.|+++|++.|+.|++|.+..... +...+... +.+++
T Consensus 170 vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~----------------~~~~~------------------ 215 (1061)
T COG3321 170 VDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESS----------------YLFSA------------------ 215 (1061)
T ss_pred ccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcce----------------eeeec------------------
Confidence 99999999999999999999999999821100 00000000 00000
Q ss_pred HcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC--CCccccCCCCCCCCCCeeEEeeCHH
Q 013344 213 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRS 290 (445)
Q Consensus 213 ~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~--~G~~t~~~~~~~~DGAaAvvL~s~~ 290 (445)
.-.+++|..++. |+. ||++ .++|+++++|.+.+
T Consensus 216 -------------------------~g~ls~~g~c~~-------------fd~~adG~v-------~geG~g~vvLKrl~ 250 (1061)
T COG3321 216 -------------------------GGMLSPDGRCKA-------------FDADADGYV-------RGEGAGVVVLKRLS 250 (1061)
T ss_pred -------------------------ccCcCCCCccee-------------cccCCCCEE-------EeeeEEEEEEEEhH
Confidence 012334433321 332 3443 68999999999999
Q ss_pred HHHhcCCCeeEEEEEeEEeecCCC-----CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----H-HHHHHcCC
Q 013344 291 VAMRKGLPILGVFRTFAAVGVDPA-----IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----V-YCRNKLGL 360 (445)
Q Consensus 291 ~a~~~g~~~~~~i~~~~~~~~~p~-----~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~-~~~e~LGl 360 (445)
.|.+.|.++++.|.+.++....-. ..+.+...+++++|+++|+.|++|+|+|.|...+... . .+...++-
T Consensus 251 ~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~ 330 (1061)
T COG3321 251 DAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPLGDPIEANALGAVYGE 330 (1061)
T ss_pred HHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCcCHHHHHHHHHHhcc
Confidence 999999999999999887642211 1224456899999999999999999999998777542 2 22233332
Q ss_pred C-CCCcCCCCCh-hcccChhhhHHHHHHHHHHHHHHhc
Q 013344 361 D-PEKINVNGGA-LAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 361 ~-~~~vn~~gG~-la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
. ++.....|.. -.+||.-.+.|.+.++..+..|+++
T Consensus 331 ~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~ 368 (1061)
T COG3321 331 GAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHG 368 (1061)
T ss_pred CCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcC
Confidence 2 2222233333 3389999999999999999999874
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-12 Score=126.48 Aligned_cols=223 Identities=22% Similarity=0.248 Sum_probs=143.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I 152 (445)
....+|+.+|+++||+++||+++|||.+++|+.+.+. .++..++..+|+ |.+.|+++|+++..||.+|+.+|
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~----ipssfvar~LGI----P~~gV~gACSTg~eAL~lAa~~V 123 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQI----TPTSFAARTLGI----PYLGLFGACSTSMEGLALAALIV 123 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCc----CcHHHHHHHhCC----CccceeecCHHHHHHHHHHHHHH
Confidence 3455899999999999999999999999999987332 466677778886 45999999999999999999999
Q ss_pred HcCCCCeE--ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccC
Q 013344 153 KAGFYDIG--SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVD 230 (445)
Q Consensus 153 ~sG~~~~v--~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~ 230 (445)
++|.++++ ..++++.. ++- .|+
T Consensus 124 aSG~Ad~VLavtsSH~~~----------------------------------------aEr----qfR------------ 147 (334)
T PRK12404 124 NSGGAKYVLTGASSHNAA----------------------------------------VEK----QFR------------ 147 (334)
T ss_pred HcCCCCEEEEEeCcccch----------------------------------------hhh----hcc------------
Confidence 99999998 33333210 000 111
Q ss_pred CCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCC----eeEEEEEe
Q 013344 231 PKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLP----ILGVFRTF 306 (445)
Q Consensus 231 ~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~----~~~~i~~~ 306 (445)
.++ ++..-||....| ...||+|+||.+.. .+.+ -.|+++.+
T Consensus 148 ------------------~P~---eyG~Qrp~taqw----------TvTgaga~~l~~~~----~~~~i~~~T~Gkv~D~ 192 (334)
T PRK12404 148 ------------------YPT---EYGGQKPPTAQW----------TVTGAGAAILSKTG----DGPRVTSATIGRVVDM 192 (334)
T ss_pred ------------------Ccc---cccCcCCCcccE----------EEEceEEEEEecCC----CCceEEEEEEEEEEec
Confidence 111 011112211111 24589999997642 1222 23555555
Q ss_pred EEeecCCCCCCcc--H--HHHHHHHHHHcCCCCCCccEEEecCCChH---HHHHHHHHcCCCC-CCcCCCCChhcc----
Q 013344 307 AAVGVDPAIMGVG--P--AVAIPAAVKSAGLQLDDIDLFEINEAFAS---QFVYCRNKLGLDP-EKINVNGGALAI---- 374 (445)
Q Consensus 307 ~~~~~~p~~~~~~--~--~~ai~~aL~~aGl~~~DID~~e~h~~~~~---~~~~~~e~LGl~~-~~vn~~gG~la~---- 374 (445)
+. .+|..||.+ | ..-|.+-|++.|.+|+|.|++..-|-... +...++++-|++. +.....=|.+-+
T Consensus 193 g~--~d~~nMGaaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~ 270 (334)
T PRK12404 193 GL--TDPFNMGGAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLGHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQ 270 (334)
T ss_pred CC--CCcccchhhhhHHHHHHHHHHHHHhCCChhhccEEEEcchHHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCC
Confidence 54 377788754 3 46788899999999999999998876544 3334444446553 211111111111
Q ss_pred -----cChhhhHHHHHHHHHHHHHHhc
Q 013344 375 -----GHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 375 -----Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
|--.|++.....-.++.+|++.
T Consensus 271 ~~~aGgSGcgcsA~v~~g~~~~~~~~g 297 (334)
T PRK12404 271 PVIAGASGPGCSATVTYGHLLNRMKRG 297 (334)
T ss_pred cccCCCcccchHHHHHHHHHHHHHhcC
Confidence 2334666666666677777654
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.2e-12 Score=132.88 Aligned_cols=96 Identities=20% Similarity=0.212 Sum_probs=78.0
Q ss_pred eeccccCCCC-CCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHH---HcCCCCCCceEEe
Q 013344 59 RTALCKSKRG-GFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAF---YAGFPETVPVRTV 134 (445)
Q Consensus 59 rT~~~~~~~G-~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~---~lGl~~~~~~~~v 134 (445)
+|+++.++.. ...+++..+|+..|++.+|++++++|++||.|++|+.+++.. .+..+..+.. .+|.+ ++.++++
T Consensus 33 ~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~-sps~a~~v~~lL~~lG~~-~~~~fDi 110 (454)
T TIGR01833 33 TIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDK-SKSVKTVLMQLFEESGNT-DVEGIDT 110 (454)
T ss_pred eechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCchHHHHHHHHHhcCCC-CceEEec
Confidence 3566554421 235789999999999999999999999999999999999876 4444555554 34664 7899999
Q ss_pred cCcCcHHHHHHHHHHHHHHcCC
Q 013344 135 NRQCSSGLQAVADVAAAIKAGF 156 (445)
Q Consensus 135 ~~~CsSgl~Al~~A~~~I~sG~ 156 (445)
+.+|.|+..||..|.++|++|.
T Consensus 111 ~~AC~G~t~AL~~A~~~i~s~~ 132 (454)
T TIGR01833 111 TNACYGGTAALFNAINWIESSS 132 (454)
T ss_pred cccchhHHHHHHHHHHHHHcCC
Confidence 9999999999999999999885
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.4e-11 Score=99.44 Aligned_cols=88 Identities=28% Similarity=0.363 Sum_probs=71.3
Q ss_pred HHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEE
Q 013344 328 VKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISM 407 (445)
Q Consensus 328 L~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~ 407 (445)
|+++|++++|||++.+|+.+..+...+.+.+|++++++..+. +.+||+|+++++..|+++.+++.. +.|+.++
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~~------~~~Gn~~sa~~~~~L~~~~~~g~~-~~Gd~vl 73 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKILDSIAKRLGIPPERFPDNL------AEYGNTGSASIPINLADALEEGRI-KPGDRVL 73 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-TH------HHH-B-GGGHHHHHHHHHHHTTSS-CTTEEEE
T ss_pred CccccCCHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHHH------hccCcchhhhHHHHHHHHHHcCCC-CCCCEEE
Confidence 789999999999999999999999999999999999988776 889999999999999999988766 7777655
Q ss_pred e--ecccceeEEEEEEc
Q 013344 408 C--IGTGMGAAAVFERG 422 (445)
Q Consensus 408 ~--~G~G~~~a~~l~~~ 422 (445)
+ +|.|+++++++.++
T Consensus 74 ~~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 74 LVGFGAGFSWGAAVLRW 90 (90)
T ss_dssp EEEEETTTEEEEEEEE-
T ss_pred EEEEEhhheeEEEEEEC
Confidence 4 78889998888774
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.5e-09 Score=114.90 Aligned_cols=239 Identities=23% Similarity=0.268 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCccc--ch-----------HHH-----HHHHHcCCCCCCceEE
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQR--AS-----------ECR-----MAAFYAGFPETVPVRT 133 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~~~--~~-----------~a~-----~~~~~lGl~~~~~~~~ 133 (445)
..|+.++..+|+-|+||.|.++. ++++|.+.++.... .. ..+ .+..-+.+ .+|.+.
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf--qGPS~s 165 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDF--QGPSFS 165 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEec--cCCchh
Confidence 57999999999999999999886 47777665543210 00 112 12223344 689999
Q ss_pred ecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Q 013344 134 VNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 212 (445)
Q Consensus 134 v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~ 212 (445)
++++|+|.+.|+..|.+.|++|+||.+.+.. .+.-- | -.++...+-
T Consensus 166 ~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLk--------P--------------------t~slQFlRL----- 212 (2376)
T KOG1202|consen 166 VDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILK--------P--------------------TTSLQFLRL----- 212 (2376)
T ss_pred hhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEec--------c--------------------chhhHHHHh-----
Confidence 9999999999999999999999997651100 00000 0 000000000
Q ss_pred HcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHH
Q 013344 213 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVA 292 (445)
Q Consensus 213 ~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a 292 (445)
-+++.|..++ .|+ +.+|.-..+||.++++|.+...|
T Consensus 213 --------------------------gmls~dGsCk-------------aFD-----eagnGY~Rseg~~avllqrk~~A 248 (2376)
T KOG1202|consen 213 --------------------------GMLSPDGSCK-------------AFD-----EAGNGYCRSEGVVAVLLQRKSLA 248 (2376)
T ss_pred --------------------------cCcCCCCccc-------------chh-----ccCCceeecCceEEEEEehhHHH
Confidence 0122232222 133 24555557999999999999998
Q ss_pred HhcCCCeeEEEE---EeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHHHHHHcCCCCCCc
Q 013344 293 MRKGLPILGVFR---TFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCRNKLGLDPEKI 365 (445)
Q Consensus 293 ~~~g~~~~~~i~---~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~~~~e~LGl~~~~v 365 (445)
++....++-... |+...++. -..|.-..+.+++.|+++|+.|+++-|+|.|...+.. +...+-.+ +|..+.
T Consensus 249 rRvYAtilnartNTDGfKEqGvT-fP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVGDpQEaN~it~~-fC~~Rt 326 (2376)
T KOG1202|consen 249 RRVYATILNARTNTDGFKEQGVT-FPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVGDPQEANGITRF-FCATRT 326 (2376)
T ss_pred HHHHHHhhccccCCCchhhcCcc-CCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCCChHHhhhHHHH-HhhcCC
Confidence 875443321000 11111111 0123334689999999999999999999999876653 22222221 233322
Q ss_pred CC--CCC-hhcccChhhhHHHHHHHHHHHHHHh
Q 013344 366 NV--NGG-ALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 366 n~--~gG-~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
.+ .|. .-.+||+--++|...+...|..+.+
T Consensus 327 ~pLLIGSvKSNMGHaEPASGv~alaKillsmE~ 359 (2376)
T KOG1202|consen 327 TPLLIGSVKSNMGHAEPASGVCALAKILLSMEE 359 (2376)
T ss_pred CceEeeeccccCCCCCccchHHHHHHHHHHHHh
Confidence 21 222 2348899999999999999888875
|
|
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.3e-08 Score=93.36 Aligned_cols=216 Identities=22% Similarity=0.336 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcC
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAG 155 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG 155 (445)
..|..+|++.||+++++.++|||.++-|--..+. ..+...+..+++ |.+-+-.+||+...+|.+|+.+|..|
T Consensus 52 ~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~----i~s~f~ar~l~i----Pf~GlygACST~~e~l~laa~~vdgg 123 (329)
T PF07451_consen 52 SKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI----ISSSFAARDLGI----PFLGLYGACSTMMESLALAAMLVDGG 123 (329)
T ss_dssp HHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC----CHHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh----HHHHHHHHhcCC----CccchhhHHHHHHHHHHHHHHHHhCC
Confidence 4688999999999999999999999988766654 366777778876 68999999999999999999999999
Q ss_pred CCCeE--ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCC
Q 013344 156 FYDIG--SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKT 233 (445)
Q Consensus 156 ~~~~v--~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~ 233 (445)
.++.+ ..++++.. ||+ .|+ .|.+
T Consensus 124 ~a~~vla~tSSH~~t--------------AER------------------------------QfR---~P~E-------- 148 (329)
T PF07451_consen 124 FADYVLAATSSHFAT--------------AER------------------------------QFR---FPTE-------- 148 (329)
T ss_dssp S-SEEEEEEEE-CCH--------------HHH------------------------------HT------GG--------
T ss_pred CcceEEEEeccccch--------------hhh------------------------------hcc---Cchh--------
Confidence 99988 33333211 110 011 0110
Q ss_pred CCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCC----eeEEEEEeEEe
Q 013344 234 GDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLP----ILGVFRTFAAV 309 (445)
Q Consensus 234 g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~----~~~~i~~~~~~ 309 (445)
+..-||.... . ...||+|+||.+... +.+ ..|+++.++.
T Consensus 149 ----------------------yG~Qrp~tAq---w-------TVTGaGa~il~~~~~----~p~It~~T~GkVvD~G~- 191 (329)
T PF07451_consen 149 ----------------------YGGQRPPTAQ---W-------TVTGAGAAILSKEGS----GPRITHATIGKVVDMGI- 191 (329)
T ss_dssp ----------------------GT----TT-----E-------E--EEEEEEEESS------SEEEEEEE----B-SS--
T ss_pred ----------------------ccCCCCCccc---E-------EEeceEEEEEecCCC----CcEEEEEEEEEEEEcCC-
Confidence 0001111111 1 245899999987542 111 1233333333
Q ss_pred ecCCCCCCcc--H--HHHHHHHHHHcCCCCCCccEEEecCCChH---HHHHHHHHcCCCCC--------------CcCC-
Q 013344 310 GVDPAIMGVG--P--AVAIPAAVKSAGLQLDDIDLFEINEAFAS---QFVYCRNKLGLDPE--------------KINV- 367 (445)
Q Consensus 310 ~~~p~~~~~~--~--~~ai~~aL~~aGl~~~DID~~e~h~~~~~---~~~~~~e~LGl~~~--------------~vn~- 367 (445)
.+|..||.+ | ..-|.+-|++.|.+|+|.|++..=|-... +...++++-|++.. +-++
T Consensus 192 -~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGDLg~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~ 270 (329)
T PF07451_consen 192 -KDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGDLGKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVH 270 (329)
T ss_dssp ---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS-HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--T
T ss_pred -CCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecchHHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccc
Confidence 367778754 3 36788899999999999999999887554 34445555566542 1122
Q ss_pred CCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 368 NGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 368 ~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
.|| --.|++.....-.++.+|++..
T Consensus 271 aGG-----SGcgCSA~V~~g~ll~~l~~g~ 295 (329)
T PF07451_consen 271 AGG-----SGCGCSAVVLCGYLLPKLRKGE 295 (329)
T ss_dssp T-E-----ESHHHHHHHHHHCHHHHHHTTS
T ss_pred cCC-----CCcchHHHHHHHHHHHHHHcCC
Confidence 232 3356666666667778887643
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.7e-07 Score=87.91 Aligned_cols=86 Identities=12% Similarity=0.110 Sum_probs=66.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEec-CcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~-~~CsSgl~Al~~A~~~ 151 (445)
+...+|+.+|+++||+++|++++||+.||+.++++-.. +..-..+...|||+.++..+.|+ .||.+|..+|..|...
T Consensus 98 ~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~--PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~ 175 (226)
T PF00195_consen 98 EEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAA--PGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDI 175 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSEC--S-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCC--CchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHH
Confidence 34678999999999999999999999999999987542 33344566699999888888775 7899999999999999
Q ss_pred HHcCCCCeE
Q 013344 152 IKAGFYDIG 160 (445)
Q Consensus 152 I~sG~~~~v 160 (445)
.++..-..|
T Consensus 176 ~~~~p~a~V 184 (226)
T PF00195_consen 176 ARANPGARV 184 (226)
T ss_dssp HHHSTT-EE
T ss_pred HhCCccceE
Confidence 888655444
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.6e-07 Score=86.97 Aligned_cols=84 Identities=25% Similarity=0.401 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC-----cEEEEeccCCCc------------c-----------cchHHHHHHHHcCCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG-----DIVVGTVLAPGS------------Q-----------RASECRMAAFYAGFP 126 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId-----~vi~g~~~~~~~------------~-----------~~~~a~~~~~~lGl~ 126 (445)
...|+..++.+||+++|+++.+++ .|++|+...+.. . ...++..++..+|+
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl- 165 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL- 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC-
Confidence 468999999999999999885443 477888766320 0 01235567778898
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
+.|.++++.+|+|++.||..|+++|++|++|++
T Consensus 166 -~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~ 198 (254)
T PF00109_consen 166 -RGPSYTVSTACASGLAALEAAYRAIRSGEADVA 198 (254)
T ss_dssp --SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEE
T ss_pred -CCccccccccccccccccchhcccccccccccc
Confidence 589999999999999999999999999999998
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.4e-06 Score=84.09 Aligned_cols=80 Identities=21% Similarity=0.271 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEec-CcCcHHHHHHHHHHHHHH
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 153 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~-~~CsSgl~Al~~A~~~I~ 153 (445)
.+.++..|++++|+++||+|+|||.+|+.+++... .+..+.++..++|+..++..+++. .||++|+.+|+.|.++++
T Consensus 83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~p--tPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNP--TPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCc--CCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 55688999999999999999999999987765433 345667788899998888899875 899999999999999999
Q ss_pred cCC
Q 013344 154 AGF 156 (445)
Q Consensus 154 sG~ 156 (445)
.-.
T Consensus 161 ~~p 163 (290)
T PF08392_consen 161 AHP 163 (290)
T ss_pred hCC
Confidence 754
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=98.23 E-value=9.9e-07 Score=77.99 Aligned_cols=99 Identities=21% Similarity=0.342 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh----
Q 013344 320 PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR---- 395 (445)
Q Consensus 320 ~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~---- 395 (445)
....+.++|++.|++..|+++|.+|.....+...+.+.|||+++++-.+--.+ ..+||+++..|+.+|+++++
T Consensus 42 i~~~~~~~L~~~g~~~~~~~~wavHPGG~~ILd~v~~~L~L~~~~l~~Sr~vL---r~yGNmSSaTVlfVL~~~~~~~~~ 118 (151)
T PF02797_consen 42 IPPFVEDLLARHGLSDWDILFWAVHPGGRKILDAVEEALGLSPEQLRASREVL---REYGNMSSATVLFVLERMRRKSAE 118 (151)
T ss_dssp HHHHHHHHHHGGTCCSGGGSEEEEE-SSHHHHHHHHHHHTS-GGGGHHHHHHH---HHH-B-GGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcccccccceeeecCChHHHHHHHHHHcCCCHHHHHHHHHHH---HhcCCCCCcchHHHHHHHHhhhhh
Confidence 34788899999999988888999999999999999999999999988776555 67999999999999999987
Q ss_pred cCCC-----CceeeEEEeecccceeEEEEEEc
Q 013344 396 RGRD-----CRFGVISMCIGTGMGAAAVFERG 422 (445)
Q Consensus 396 ~~~~-----~~~G~~~~~~G~G~~~a~~l~~~ 422 (445)
++.. ...|+.. .+|.|++.-++|+|.
T Consensus 119 ~g~~~~~~g~~~gv~~-afGPG~t~E~~lLr~ 149 (151)
T PF02797_consen 119 EGAPPPGEGGEWGVML-AFGPGLTIEGMLLRS 149 (151)
T ss_dssp TTTSBTTTTBSEEEEE-EEETTTEEEEEEEEE
T ss_pred hcccCCCCCCCeEEEE-EECCcceEeeEEEee
Confidence 2211 0233333 399999997777763
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A .... |
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.1e-05 Score=68.49 Aligned_cols=96 Identities=22% Similarity=0.266 Sum_probs=61.4
Q ss_pred EEEEEeEEeecC---CCC---CCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----H-HHHHHcCCCC--CCcCC
Q 013344 301 GVFRTFAAVGVD---PAI---MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----V-YCRNKLGLDP--EKINV 367 (445)
Q Consensus 301 ~~i~~~~~~~~~---p~~---~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~-~~~e~LGl~~--~~vn~ 367 (445)
+.+.+++..... ... .+.+...+++++|+++|++++|||+++.|....... . .+.+.++-.. .++..
T Consensus 2 a~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v 81 (119)
T PF02801_consen 2 AVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPV 81 (119)
T ss_dssp EEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEE
T ss_pred EEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccce
Confidence 567777765522 111 233567999999999999999999999998877742 2 2333344332 34555
Q ss_pred CCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 368 NGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 368 ~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+.-+-.+||..+++|..+++.++..|+++
T Consensus 82 ~s~K~~~Gh~~~asG~~~l~~~~l~l~~~ 110 (119)
T PF02801_consen 82 GSVKSNIGHTEAASGLLSLAKALLALEHG 110 (119)
T ss_dssp E-THHHH-B-GGGHHHHHHHHHHHHHHHT
T ss_pred eccccccccccccchHHHHHHHHHHHhcC
Confidence 55556699999999999999999999865
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=97.97 E-value=1e-05 Score=72.53 Aligned_cols=86 Identities=17% Similarity=0.298 Sum_probs=70.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCC--CCCceEEecCcCcHHHHHHHHH
Q 013344 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP--ETVPVRTVNRQCSSGLQAVADV 148 (445)
Q Consensus 71 ~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~--~~~~~~~v~~~CsSgl~Al~~A 148 (445)
.++....|++.|++.+|++.+++|++|+.+++|+-+.-.. .-..+.++...+|++ .++..+++..+|-+|..||..|
T Consensus 49 ~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~-sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a 127 (174)
T PF01154_consen 49 PDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDK-SKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNA 127 (174)
T ss_dssp TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBS-SS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccc-cccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHH
Confidence 4688999999999999999999999999999999776554 444677777889983 4567789999999999999999
Q ss_pred HHHHHcCCC
Q 013344 149 AAAIKAGFY 157 (445)
Q Consensus 149 ~~~I~sG~~ 157 (445)
.++|+++..
T Consensus 128 ~~~v~s~~~ 136 (174)
T PF01154_consen 128 VNWVASSPW 136 (174)
T ss_dssp HHHHCSTTS
T ss_pred HHHHhcCCC
Confidence 999999864
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00043 Score=54.39 Aligned_cols=29 Identities=28% Similarity=0.276 Sum_probs=25.5
Q ss_pred EEecCcCcHHHHHHHHHHHHHHcCCCCeE
Q 013344 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 132 ~~v~~~CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
|+++++|++++.||.+|..+|++|.++.+
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~ 29 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNA 29 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEE
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEE
Confidence 68999999999999999999999988877
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.00032 Score=71.97 Aligned_cols=105 Identities=22% Similarity=0.192 Sum_probs=74.2
Q ss_pred CCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCC------------CC
Q 013344 248 RPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP------------AI 315 (445)
Q Consensus 248 r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p------------~~ 315 (445)
+++++.+++.+.+++.+| ++..+||+..||+++++++.++.+ + .++.+.++.-.+. ..
T Consensus 194 ~~eI~~~~v~~~~~~~dp---~~r~d~~~~~dg~a~l~~a~~~~~---g----~~tagnas~i~dga~a~~~~~~~~~~~ 263 (392)
T COG0183 194 FDEITPEDVLNSPVVADP---LRRLDCSPTSDGAAALVPAFEEVG---G----TVTAGNASGINDGAAALLLMSESKAKE 263 (392)
T ss_pred CCceeeEEecCCceecCC---cccCCCCCChhhhcCceeccccCC---c----eEEEecccccccHHHHHHHhhHHHHHH
Confidence 345666666666555444 788999999999999999987642 1 1222322111111 11
Q ss_pred CCccHHHHHHHHHHHcCCCCC--CccEEEecCCChHHHHHHHHHcCCCCC
Q 013344 316 MGVGPAVAIPAAVKSAGLQLD--DIDLFEINEAFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 316 ~~~~~~~ai~~aL~~aGl~~~--DID~~e~h~~~~~~~~~~~e~LGl~~~ 363 (445)
.+..+ .+..++|+.+|++|. ++|+.++|++|+...+..+|.|||++.
T Consensus 264 ~~l~~-~A~~~a~~~aGv~p~~~~~~v~av~~~~~~~~l~~~edlgl~e~ 312 (392)
T COG0183 264 LGLAP-LAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLLALEDLGLAEK 312 (392)
T ss_pred CCCcH-HHHHHHHHHhCCCcccccCCHHHHHHHHHHcCCchhhhcCceec
Confidence 22222 677789999999998 999999999999999999999999974
|
|
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.42 Score=47.80 Aligned_cols=100 Identities=16% Similarity=0.128 Sum_probs=69.2
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcC--CCCC
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAG--FPET 128 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lG--l~~~ 128 (445)
.-+=+|-++|..+- .-..+...-|+.-+.+.++++-+|+++.|..+-||+-+-..- .-..-......++ -...
T Consensus 40 gKytIGLGq~~Mgf----csdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDK-SKSVKt~LMqLF~~sgNtd 114 (462)
T KOG1393|consen 40 GKYTIGLGQTQMGF----CSDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDK-SKSVKTVLMQLFEESGNTD 114 (462)
T ss_pred cceEeccCcceecc----cCchhhhhhhhHHHHHHHHHHhCCChhhcceEEecceecccc-chHHHHHHHHHhhhcCCCc
Confidence 44556666664431 112345677888999999999999999999999998654332 1111122222333 2245
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcC
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAG 155 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG 155 (445)
+..++..++|=+|..||..|.++|++-
T Consensus 115 IEGiDttnACYGGtaALfnavnWiESs 141 (462)
T KOG1393|consen 115 IEGIDTTNACYGGTAALFNAVNWIESS 141 (462)
T ss_pred cccccccccccccHHHHHHHhhhhhhc
Confidence 778888899999999999999999984
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.056 Score=57.04 Aligned_cols=69 Identities=17% Similarity=0.195 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCC--CCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h----~~~~~~~~~~~e~LGl~~--~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
.|++++|+++|++|+|||++..+ .+.......+.++||+.. ..++.+| .|++|...-+.+...+.+
T Consensus 182 ~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsg--------mGCSggl~aLdlA~~lL~ 253 (511)
T PLN02192 182 GAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGG--------MGCSAGLISIDLAKHLLQ 253 (511)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEccc--------chhhhHHHHHHHHHHHHH
Confidence 79999999999999999999876 234556778999999975 3556665 577777776766666665
Q ss_pred cCC
Q 013344 396 RGR 398 (445)
Q Consensus 396 ~~~ 398 (445)
.+.
T Consensus 254 a~~ 256 (511)
T PLN02192 254 VHP 256 (511)
T ss_pred cCC
Confidence 543
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.072 Score=51.90 Aligned_cols=69 Identities=19% Similarity=0.346 Sum_probs=53.8
Q ss_pred HHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCC--CcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h----~~~~~~~~~~~e~LGl~~~--~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
.+++++|+++|++|+|||++.++ -+..+..-++.+++|+.++ ..|.+| .|+++..--+.+.++|.+
T Consensus 89 ~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsG--------MGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 89 GAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSG--------MGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccC--------CcchhhHHHHHHHHHHHH
Confidence 79999999999999999999886 3345667889999999876 456666 677777777777777665
Q ss_pred cCC
Q 013344 396 RGR 398 (445)
Q Consensus 396 ~~~ 398 (445)
..+
T Consensus 161 ~~p 163 (290)
T PF08392_consen 161 AHP 163 (290)
T ss_pred hCC
Confidence 443
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.09 Score=55.50 Aligned_cols=69 Identities=20% Similarity=0.257 Sum_probs=53.7
Q ss_pred HHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC--CcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~--~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
.|++++|+++|++++|||++.++- +.......+.++||+.++ .++.+| .|++|...-+.+..++.+
T Consensus 178 ~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~g--------mGCsggl~aL~lA~~ll~ 249 (502)
T PLN02377 178 GALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAVDLAKDMLQ 249 (502)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEeccc--------chhhHHHHHHHHHHHHHH
Confidence 799999999999999999998742 345677889999999854 566665 577877777777777766
Q ss_pred cCC
Q 013344 396 RGR 398 (445)
Q Consensus 396 ~~~ 398 (445)
.+.
T Consensus 250 ~~~ 252 (502)
T PLN02377 250 VHR 252 (502)
T ss_pred cCC
Confidence 554
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.091 Score=55.14 Aligned_cols=70 Identities=19% Similarity=0.281 Sum_probs=55.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCC--CcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h----~~~~~~~~~~~e~LGl~~~--~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..|++++|+++|++|+|||++.++ +.+......+.++||+.++ .++.+| .|++|...-+.+..++.
T Consensus 153 ~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~g--------mGCSggl~aL~lA~~ll 224 (478)
T PLN02932 153 IGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGG--------MGCSAGVIAIDAAKSLL 224 (478)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEecc--------chhhhHHHHHHHHHHHH
Confidence 389999999999999999999875 5566778899999999743 566665 67888777777777776
Q ss_pred hcCC
Q 013344 395 RRGR 398 (445)
Q Consensus 395 ~~~~ 398 (445)
+.+.
T Consensus 225 ~~~~ 228 (478)
T PLN02932 225 QVHR 228 (478)
T ss_pred HcCC
Confidence 6543
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.46 Score=45.08 Aligned_cols=92 Identities=22% Similarity=0.218 Sum_probs=56.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCC-CCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~-~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..+++++|+++|++++|||.+.+... .......+.+.+|+.. ..+..+ .++++....+.....+.
T Consensus 12 ~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~~~~i~---------~~C~s~~~al~~A~~~i 82 (254)
T cd00327 12 FEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPAYSVN---------QACATGLTALALAVQQV 82 (254)
T ss_pred HHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCCcceec---------cHhHHHHHHHHHHHHHH
Confidence 47999999999999999999987533 2344567888899952 222222 35555555445555555
Q ss_pred hcCCCCceeeEEEe----ecccceeEEEEEEcc
Q 013344 395 RRGRDCRFGVISMC----IGTGMGAAAVFERGD 423 (445)
Q Consensus 395 ~~~~~~~~G~~~~~----~G~G~~~a~~l~~~~ 423 (445)
+.+.. +..+++.+ +|-| +++++|.+++
T Consensus 83 ~~g~~-~~~lv~~~e~~~~gdG-Aaa~vL~~~~ 113 (254)
T cd00327 83 QNGKA-DIVLAGGSEEFVFGDG-AAAAVVESEE 113 (254)
T ss_pred HCCCC-CEEEEEecceeeecce-EEEEEECcHH
Confidence 55543 55554432 4444 4456666654
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.23 Score=51.01 Aligned_cols=69 Identities=17% Similarity=0.156 Sum_probs=49.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCCC--cCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h----~~~~~~~~~~~e~LGl~~~~--vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..|++++|+++|++++|||++.+. ..+......+.++||+.+.- +...+ .|++|...-+.....+.
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~--------~gC~g~~~aL~~A~~~~ 178 (393)
T PLN03172 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ--------QGCFAGGTVLRLAKDLA 178 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC--------CchHHHHHHHHHHHHHH
Confidence 389999999999999999988642 23566788899999998762 33322 46677666666656555
Q ss_pred hcC
Q 013344 395 RRG 397 (445)
Q Consensus 395 ~~~ 397 (445)
+.+
T Consensus 179 ~~~ 181 (393)
T PLN03172 179 ENN 181 (393)
T ss_pred HcC
Confidence 543
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.14 Score=48.23 Aligned_cols=69 Identities=23% Similarity=0.302 Sum_probs=46.2
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC--CcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~--~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
+|++++|+++|++++||+++..--+ .......+++.|||.++ ++..++ +|+.|....+.....+-+
T Consensus 106 ~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~--------~GC~gg~~~L~~A~~~~~ 177 (226)
T PF00195_consen 106 EAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFG--------MGCAGGAAGLRRAKDIAR 177 (226)
T ss_dssp HHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES---------GGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEec--------cchhhHHHHHHHHHHHHh
Confidence 8999999999999999999987533 23467899999999986 555555 566665555555555554
Q ss_pred cCC
Q 013344 396 RGR 398 (445)
Q Consensus 396 ~~~ 398 (445)
...
T Consensus 178 ~~p 180 (226)
T PF00195_consen 178 ANP 180 (226)
T ss_dssp HST
T ss_pred CCc
Confidence 444
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.23 Score=50.98 Aligned_cols=68 Identities=16% Similarity=0.121 Sum_probs=48.8
Q ss_pred HHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCCC--cCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h----~~~~~~~~~~~e~LGl~~~~--vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
.|++++|+++|++++|||++.+. ..+......+.++||+.+.- +...+ .|++|...-+.....+.+
T Consensus 108 ~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~--------~gC~g~~~aL~~A~~~~~ 179 (391)
T PLN03173 108 EAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQ--------QGCFAGGTVLRLAKDLAE 179 (391)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhc--------CccHHHHHHHHHHHHHHH
Confidence 89999999999999999988653 23566778899999998753 32222 466666666666566555
Q ss_pred cC
Q 013344 396 RG 397 (445)
Q Consensus 396 ~~ 397 (445)
.+
T Consensus 180 ~~ 181 (391)
T PLN03173 180 NN 181 (391)
T ss_pred hC
Confidence 44
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.22 Score=51.16 Aligned_cols=70 Identities=20% Similarity=0.228 Sum_probs=50.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCCC--cCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~~--vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..|++++|+++|++++|||++.+.- ........+.++||+.+.. +...+ .|++|....+.....+.
T Consensus 106 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~--------~gC~g~~~aL~~A~~~i 177 (389)
T PLN03168 106 AEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ--------TGCFGGASVLRVAKDLA 177 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC--------CccHHHHHHHHHHHHHH
Confidence 3899999999999999999998752 2455677899999998753 33332 46777666666666665
Q ss_pred hcCC
Q 013344 395 RRGR 398 (445)
Q Consensus 395 ~~~~ 398 (445)
+.+.
T Consensus 178 ~~~~ 181 (389)
T PLN03168 178 ENNK 181 (389)
T ss_pred HhCC
Confidence 5543
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.25 Score=50.78 Aligned_cols=72 Identities=21% Similarity=0.238 Sum_probs=49.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
..|++++|+++|++++|||++.+.- .+......+.++||+.+......- ...|++|...-+.+...+.+.
T Consensus 111 ~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d------~~~gC~g~~~aL~~A~~~~~~ 184 (391)
T PLN03169 111 VEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVML------YFLGCSGGVAGLRVAKDIAEN 184 (391)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeec------ccChhHHHHHHHHHHHHHHHh
Confidence 3899999999999999999876543 244556788999999875311111 235777777666666666555
Q ss_pred CC
Q 013344 397 GR 398 (445)
Q Consensus 397 ~~ 398 (445)
+.
T Consensus 185 ~~ 186 (391)
T PLN03169 185 NP 186 (391)
T ss_pred CC
Confidence 43
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.26 Score=50.82 Aligned_cols=70 Identities=17% Similarity=0.184 Sum_probs=51.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCCC--cCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h----~~~~~~~~~~~e~LGl~~~~--vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..|++++|+++|++++|||++.+- ..+......+.++||+.+.- .... -.|++|...-+.....+.
T Consensus 111 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~--------~~gC~G~~~aL~~A~~l~ 182 (401)
T PLN03170 111 KAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMY--------QQGCFAGGTVLRVAKDLA 182 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhh--------cChhHHHHHHHHHHHHHH
Confidence 389999999999999999987642 12556778899999998762 2222 257777777666666666
Q ss_pred hcCC
Q 013344 395 RRGR 398 (445)
Q Consensus 395 ~~~~ 398 (445)
+.+.
T Consensus 183 ~~~~ 186 (401)
T PLN03170 183 ENNR 186 (401)
T ss_pred HcCC
Confidence 6544
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.36 Score=49.70 Aligned_cols=70 Identities=19% Similarity=0.162 Sum_probs=51.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCCC--cCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h----~~~~~~~~~~~e~LGl~~~~--vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..|++++|+++|++++|||++.+. +.+......+.++||+.... ..... .|++|...-+.+...+.
T Consensus 113 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~--------~gC~g~~~aL~~A~~li 184 (399)
T PLN03171 113 AEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL--------NGCFAGAAALRLAKDLA 184 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC--------CccHHHHHHHHHHHHHH
Confidence 389999999999999999999872 33556777899999997653 22222 27777777666666666
Q ss_pred hcCC
Q 013344 395 RRGR 398 (445)
Q Consensus 395 ~~~~ 398 (445)
+.+.
T Consensus 185 ~~~~ 188 (399)
T PLN03171 185 ENNR 188 (399)
T ss_pred HhCC
Confidence 5543
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.42 Score=47.63 Aligned_cols=70 Identities=24% Similarity=0.309 Sum_probs=54.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h-----~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..|+++||+++|++++|||++.+- ..|..+.-.+.+.||+..-...- =.-.++|..--+.+..++.+
T Consensus 57 ~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~~~afD--------l~aaCsgf~yaL~~A~~~i~ 128 (323)
T COG0332 57 VEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAPAFD--------LQAACSGFLYALSVADGLIR 128 (323)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCCcceee--------chhhhHHHHHHHHHHHHHHH
Confidence 489999999999999999999873 44678888999999998733221 11367777777777788887
Q ss_pred cCC
Q 013344 396 RGR 398 (445)
Q Consensus 396 ~~~ 398 (445)
.+.
T Consensus 129 sG~ 131 (323)
T COG0332 129 SGG 131 (323)
T ss_pred cCC
Confidence 776
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.34 Score=51.33 Aligned_cols=69 Identities=17% Similarity=0.264 Sum_probs=53.2
Q ss_pred HHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC--CcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~--~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
.+++++|+++|++++|||++.++- ++......+.++||+.++ .++.+| .|++|...-+.+...+.+
T Consensus 194 ~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsg--------mGCSggl~aL~lA~~lL~ 265 (521)
T PLN02854 194 GALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGG--------MGCSAGLISIDLANDLLK 265 (521)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEeccc--------chhhhHHHHHHHHHHHHH
Confidence 789999999999999999998852 344567789999999754 455554 588888777777777766
Q ss_pred cCC
Q 013344 396 RGR 398 (445)
Q Consensus 396 ~~~ 398 (445)
.+.
T Consensus 266 ~~~ 268 (521)
T PLN02854 266 ANP 268 (521)
T ss_pred hCC
Confidence 554
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=92.39 E-value=0.4 Score=50.00 Aligned_cols=69 Identities=17% Similarity=0.296 Sum_probs=49.4
Q ss_pred HHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC--CcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~--~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
.|++++|+++|++++|||++.++. ........+.++||+.++ .++.++ .|++|...-+.+...+.+
T Consensus 140 ~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~g--------mGCsggv~aL~lA~~ll~ 211 (466)
T PLN00415 140 GALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSG--------MGCSAGAISVDLATNLLK 211 (466)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEecc--------ccchHHHHHHHHHHHHHH
Confidence 689999999999999999887652 234566788899999854 344444 566776666666666655
Q ss_pred cCC
Q 013344 396 RGR 398 (445)
Q Consensus 396 ~~~ 398 (445)
.+.
T Consensus 212 a~~ 214 (466)
T PLN00415 212 ANP 214 (466)
T ss_pred hCC
Confidence 443
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=91.36 E-value=1.2 Score=44.96 Aligned_cols=76 Identities=13% Similarity=0.187 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..|++++|+++|++++|||.+..... .......+.+.||+.+...... -..|++|...-+.....+.+
T Consensus 55 ~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~d-------v~~aC~g~~~al~~A~~~i~ 127 (345)
T TIGR00748 55 VEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAAD-------LEFACKAGTAGIQACMGLVA 127 (345)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEE-------HHHhHHHHHHHHHHHHHHHH
Confidence 48999999999999999999976321 1223446778999965322211 12356654444444444444
Q ss_pred cCCCCceee
Q 013344 396 RGRDCRFGV 404 (445)
Q Consensus 396 ~~~~~~~G~ 404 (445)
.+.. ++.+
T Consensus 128 sg~~-~~vL 135 (345)
T TIGR00748 128 SGMI-KYGL 135 (345)
T ss_pred cCCC-CEEE
Confidence 4432 4444
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.97 Score=45.16 Aligned_cols=70 Identities=20% Similarity=0.107 Sum_probs=44.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..|++++|+++|+.++|||++..... .......+.+.||++++...... + .|++|..+.+.....+.+
T Consensus 66 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v------~-~~C~~~~~al~~A~~~i~ 138 (338)
T PRK09258 66 IAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDV------S-NACLGFLNGMLDAANMIE 138 (338)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeeh------h-hhhHHHHHHHHHHHHHHH
Confidence 48999999999999999999976322 23345678899999764222111 1 255555554444455544
Q ss_pred cC
Q 013344 396 RG 397 (445)
Q Consensus 396 ~~ 397 (445)
.+
T Consensus 139 ~g 140 (338)
T PRK09258 139 LG 140 (338)
T ss_pred cC
Confidence 44
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.79 Score=45.65 Aligned_cols=71 Identities=23% Similarity=0.158 Sum_probs=44.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..|++++|+++|++++|||++..... .......+.+.||+.+...... ....+++|....+.....+.+
T Consensus 57 ~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~------~v~~~C~~~~~al~~a~~~l~ 130 (329)
T PRK07204 57 AEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCF------DINSTCLSFITALDTISYAIE 130 (329)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEE------EccchhHHHHHHHHHHHHHHH
Confidence 47999999999999999999876421 2344556788899986421111 122355555554444455554
Q ss_pred cC
Q 013344 396 RG 397 (445)
Q Consensus 396 ~~ 397 (445)
.+
T Consensus 131 ~g 132 (329)
T PRK07204 131 CG 132 (329)
T ss_pred CC
Confidence 44
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=91.11 E-value=0.84 Score=46.18 Aligned_cols=69 Identities=28% Similarity=0.405 Sum_probs=45.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC--cCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~~--vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..|++++|+++|++++|||++...-. .......+.++||+.+.. +..++ .|++|...-+.+...+.
T Consensus 90 ~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~--------~~C~~~~~al~~A~~~~ 161 (361)
T cd00831 90 EEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGG--------MGCSAGAIALDLAKDLL 161 (361)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhcccc--------ccchhHHHHHHHHHHHH
Confidence 38999999999999999999977322 222445788999998642 33332 35555555555555554
Q ss_pred hcC
Q 013344 395 RRG 397 (445)
Q Consensus 395 ~~~ 397 (445)
+.+
T Consensus 162 ~~~ 164 (361)
T cd00831 162 EAN 164 (361)
T ss_pred HHC
Confidence 443
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=90.95 E-value=0.82 Score=46.28 Aligned_cols=69 Identities=13% Similarity=0.193 Sum_probs=49.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CChHHHHHHHHHcCCCCCC--cCCCCChhcccChhhhHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEM 393 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~-----~~~~~~~~~~e~LGl~~~~--vn~~gG~la~Gh~~GatG~~~i~~~l~~L 393 (445)
..|++++|+++|++++|||++.+.- ........+.++||+.+.- +..+ .|++|...-+.....+
T Consensus 65 ~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~---------~~C~g~~~aL~~A~~~ 135 (353)
T PRK12880 65 KHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG---------QACAGYLYGLFVAHSL 135 (353)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh---------hhhHHHHHHHHHHHHH
Confidence 4899999999999999999998753 2445677889999997542 2222 3667666666666666
Q ss_pred HhcCC
Q 013344 394 KRRGR 398 (445)
Q Consensus 394 ~~~~~ 398 (445)
.+.+.
T Consensus 136 i~~~~ 140 (353)
T PRK12880 136 IQSGL 140 (353)
T ss_pred HHcCC
Confidence 65544
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=90.60 E-value=1.1 Score=44.54 Aligned_cols=40 Identities=23% Similarity=0.370 Sum_probs=32.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~ 362 (445)
..|+++||+++||+++|||++...+ .... .+.++.||++-
T Consensus 59 ~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP~ 102 (334)
T PRK12404 59 EEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIPY 102 (334)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCCc
Confidence 4899999999999999999999854 3333 37789999664
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=90.29 E-value=1.8 Score=44.22 Aligned_cols=42 Identities=21% Similarity=0.235 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC----hHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF----ASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~----~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||++...... ......+.+.||+..
T Consensus 101 ~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~~ 146 (379)
T PLN02326 101 VEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCTN 146 (379)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCCC
Confidence 489999999999999999988764221 123556888899874
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=90.12 E-value=1.2 Score=44.20 Aligned_cols=68 Identities=21% Similarity=0.199 Sum_probs=44.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----C-CChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN----E-AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h----~-~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..|++++|+++|++++|||++... | ........+.++||+.+.... . -..++.|...-+.....+.+
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~~~~~-d-------i~~~C~g~~~aL~~A~~~l~ 128 (326)
T PRK05963 57 ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQNSGAI-D-------LAGACAGFLYALVLADGFVR 128 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCCCcee-e-------ccchhhHHHHHHHHHHHHHH
Confidence 489999999999999999999762 2 223445678999999754311 1 11255555554444444443
Q ss_pred c
Q 013344 396 R 396 (445)
Q Consensus 396 ~ 396 (445)
.
T Consensus 129 ~ 129 (326)
T PRK05963 129 A 129 (326)
T ss_pred c
Confidence 3
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=89.39 E-value=1.2 Score=44.16 Aligned_cols=42 Identities=26% Similarity=0.381 Sum_probs=32.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC--hHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF--ASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~--~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||++..-+.. .....+.++.||++.
T Consensus 55 ~eAa~~ALekAGL~~~DID~IIvGdl~~Q~~~As~vA~~LGIP~ 98 (327)
T TIGR02845 55 EDAVNLALKKANLKKDDVDFFLAGDLLNQIITANFVARDLGIPF 98 (327)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeCCCCcccHHHHHHHHhCCCE
Confidence 489999999999999999999875432 123446778899743
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=89.37 E-value=2.5 Score=41.62 Aligned_cols=42 Identities=29% Similarity=0.454 Sum_probs=32.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~-----~~~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||.+..-. ........+.+.||+..
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~~ 101 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKN 101 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC
Confidence 4899999999999999999886521 12334567888999963
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=88.84 E-value=2.5 Score=43.32 Aligned_cols=67 Identities=18% Similarity=0.145 Sum_probs=44.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChH-HHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAFAS-QFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~~~-~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
.+|++++|+++||+++|||.+.+...... ....+.+.||+.+.++. .. +..|+++...+..+...++
T Consensus 33 ~eA~~~Al~dAgl~~~dID~iv~~~~~~~~~~~~la~~lGl~~~~~~-~~------~~g~~s~~~al~~A~~~I~ 100 (384)
T PRK06158 33 AQAAHRALADAGLTMADVDGLFTASPDDALWGLSVAEYLGIRPRFVD-GT------MIGGSSFLAHLLPAALALE 100 (384)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecCCCCCcHHHHHHHcCCCCeeec-cc------cCccHHHHHHHHHHHHHHH
Confidence 48999999999999999998876432111 12357788999765432 11 3346666666666666665
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=88.55 E-value=1.1 Score=43.90 Aligned_cols=66 Identities=24% Similarity=0.321 Sum_probs=49.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC----hHHHHHHHHHcCCCCC--CcCCCCChhcccChhhhHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF----ASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLL 390 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~----~~~~~~~~e~LGl~~~--~vn~~gG~la~Gh~~GatG~~~i~~~l 390 (445)
.++.+++|+.+++.++|||.+.+--+. ......++.+||+++. +++.+| +|-..|+.|.+...+-+
T Consensus 81 v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~g----lGCaaga~glara~~y~ 152 (356)
T COG3424 81 VDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWG----LGCAAGAAGLARARDYC 152 (356)
T ss_pred HHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeec----chhhhhhhHHHHHHHHH
Confidence 379999999999999999999875432 2356788999999985 777777 55666666665554443
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=86.91 E-value=1.8 Score=43.68 Aligned_cols=43 Identities=21% Similarity=0.290 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~-----~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+.... ......+.+.||+.+.
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~ 103 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPD 103 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCC
Confidence 489999999999999999998663211 1233467789999753
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=86.35 E-value=2.9 Score=41.86 Aligned_cols=42 Identities=21% Similarity=0.225 Sum_probs=31.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEe-cCC-----ChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEI-NEA-----FASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~-h~~-----~~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||++.. +.. .......+.+.||+..
T Consensus 58 ~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~~ 105 (339)
T PRK06840 58 IAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKN 105 (339)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCCC
Confidence 48999999999999999999863 321 2223456778999964
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=86.35 E-value=2.5 Score=42.17 Aligned_cols=41 Identities=24% Similarity=0.356 Sum_probs=31.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC--hHHHHHHHHHcCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF--ASQFVYCRNKLGLD 361 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~--~~~~~~~~e~LGl~ 361 (445)
.+|++++|+++|++++|||++...+.. .....+..+.||++
T Consensus 61 ~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGIP 103 (337)
T PRK08304 61 EDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGIP 103 (337)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCCc
Confidence 489999999999999999999875432 12344667888873
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=86.02 E-value=3 Score=42.53 Aligned_cols=44 Identities=27% Similarity=0.418 Sum_probs=32.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CChHHHHHHHHHcCCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGLDPEK 364 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~-----~~~~~~~~~~e~LGl~~~~ 364 (445)
..|++++|+++|++++|||++.... .+......+...||+.+.+
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~ 116 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAPPIE 116 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCCCCc
Confidence 4799999999999999999887632 2233345677889987644
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.79 E-value=4.1 Score=41.78 Aligned_cols=67 Identities=24% Similarity=0.333 Sum_probs=44.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec---CCCh---HHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN---EAFA---SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h---~~~~---~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
.+|++++|+++||+++|||.+.+. +.+. .....+.+.||+.+.+... . +..+++|...+..+...++
T Consensus 29 ~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~~~~~~~-v------~~~casg~~al~~A~~~I~ 101 (386)
T PRK08313 29 REAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGATGKPLIR-V------HTAGSVGGSTAVVAASLVQ 101 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCCCCceEE-E------eccCHHHHHHHHHHHHHHH
Confidence 489999999999999999988764 2221 1124577899997655321 1 2235566666666655554
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=85.79 E-value=2.3 Score=43.64 Aligned_cols=69 Identities=20% Similarity=0.139 Sum_probs=45.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
.+|++++|+++||+++|||.+.+..........+.+.||+.+.+...+. +..|++|...+..+...++.
T Consensus 29 ~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~l~~~lGl~~~~~~~~v------~~gg~sg~~~~~~A~~~I~s 97 (386)
T PRK07855 29 CEAVLAALDDAGLAPSDVDGLVTFTMDTNPEIAVARALGIGELKFFSRI------HYGGGAACATVQQAAMAVAT 97 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecCccccHHHHHHHCCCCCCcceeee------cCCcHHHHHHHHHHHHHHHC
Confidence 4899999999999999999876522111112457788999763221222 33478887777777766653
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=84.99 E-value=3.2 Score=41.13 Aligned_cols=42 Identities=31% Similarity=0.447 Sum_probs=32.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||++..... .......+.+.||+..
T Consensus 58 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~ 104 (325)
T PRK12879 58 IKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPN 104 (325)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCC
Confidence 48999999999999999998875322 2334566788899865
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.96 E-value=5.6 Score=40.81 Aligned_cols=68 Identities=21% Similarity=0.200 Sum_probs=45.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-CCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN-EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h-~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
.+|+.++|+++||+++|||.+... +........+.+.||+.+.++. +. +..|++|...+..+...++.
T Consensus 30 ~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~lGl~~~~~~-~v------~~gg~s~~~a~~~A~~~I~s 98 (388)
T PRK08142 30 AEVAKGALADAGLSLADVDGYFCAGDAPGLGPASMVDYLGLKLRHVD-ST------ETGGSSYLAHVGHAAQAIAA 98 (388)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEcCCCCCccHHHHHHhCCCCCeeec-cc------cCCcHHHHHHHHHHHHHHHc
Confidence 489999999999999999987652 2111111347789999764432 22 44578887777777766653
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=84.90 E-value=3.1 Score=42.66 Aligned_cols=68 Identities=13% Similarity=0.050 Sum_probs=41.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~-----~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..|++++|+++||+++|||.+.+...+ ......+...+|+..+....+- +..+++|...+..+...++
T Consensus 26 ~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v------~~~Casg~~al~~A~~~I~ 98 (386)
T TIGR01930 26 AAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTV------NRQCASGLQAVILAAQLIR 98 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeee------cchhhHHHHHHHHHHHHHH
Confidence 489999999999999999998764221 2223456677898752211121 2235555555555544444
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=84.83 E-value=4.5 Score=39.95 Aligned_cols=42 Identities=31% Similarity=0.442 Sum_probs=32.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~ 362 (445)
..+++++|+++|++++|||.+..... +......+.+.||+..
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~ 102 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKG 102 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCC
Confidence 48999999999999999998876422 2334566888899875
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=84.79 E-value=3.1 Score=42.57 Aligned_cols=42 Identities=21% Similarity=0.252 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~-----~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||.+.+...+ ......+...||+..
T Consensus 27 ~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~ 73 (386)
T cd00751 27 AAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPE 73 (386)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCC
Confidence 379999999999999999998764221 223344678899975
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.77 E-value=3.5 Score=42.58 Aligned_cols=68 Identities=18% Similarity=0.107 Sum_probs=44.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..+++++|+++||+++|||.+.+-.. .......+...+|+++.....+- +...++|+..+..+...++
T Consensus 31 ~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V------~~~CaSg~~Al~~A~~~I~ 103 (404)
T PRK06205 31 ATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQL------DRRCGSGLQAVITAAMQVQ 103 (404)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeeh------hhhhhHHHHHHHHHHHHHH
Confidence 48999999999999999998875322 12223456778898753211222 3456677766766666555
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.55 E-value=4.1 Score=41.77 Aligned_cols=68 Identities=16% Similarity=0.083 Sum_probs=45.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC---CC--hHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE---AF--ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~---~~--~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..+++++|+++||+++|||.+.+-. .+ ......+...+|++......+- +..++||...+..+...++
T Consensus 31 ~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v------~~~caSg~~av~~Aa~~I~ 103 (388)
T PRK06366 31 GAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTV------NVVCASGMLAVESAAREIM 103 (388)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceee------echhhHHHHHHHHHHHHHh
Confidence 4899999999999999999887631 11 1123446788999753222222 3457888777777766665
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=83.55 E-value=3.8 Score=40.75 Aligned_cols=44 Identities=18% Similarity=0.176 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK 364 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~~ 364 (445)
..+++++|+++|++++|||++..... .......+.+.||+...+
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~~~~ 103 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAV 103 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCCCCc
Confidence 48999999999999999999976421 112344677889986543
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.91 E-value=3.4 Score=42.29 Aligned_cols=67 Identities=18% Similarity=0.157 Sum_probs=45.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCh-----HHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAFA-----SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~~-----~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..+++++|+++||+++|||.+.+-.... .....+.+.||+...+. ... +..+++|...+..+...++
T Consensus 26 ~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~~-~~v------~~~casg~~al~~A~~~I~ 97 (385)
T PRK12578 26 WESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKVP-LRV------EAMCATGLAASLTAYTAVA 97 (385)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCCe-eEE------eccCHHHHHHHHHHHHHHH
Confidence 4899999999999999999987643221 12345778899976442 222 3346677766766666665
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.69 E-value=3.8 Score=42.13 Aligned_cols=67 Identities=13% Similarity=0.167 Sum_probs=43.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCh-----HHHHHHHHHcCCCC-CCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAFA-----SQFVYCRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~~-----~~~~~~~e~LGl~~-~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..+++++|+++|++++|||.+.+-..+. .....+...+|++. .+. .+- +...++|+..+..+...++
T Consensus 31 ~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~-~~V------~~~CaSg~~Al~~A~~~I~ 103 (393)
T PRK08235 31 GIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQT-ETV------NKVCASGLRAVTLADQIIR 103 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcce-eeh------hhhhhHHHHHHHHHHHHHH
Confidence 4899999999999999999887743321 22234567889864 332 222 3345566666666655554
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=82.41 E-value=5.6 Score=39.21 Aligned_cols=41 Identities=32% Similarity=0.380 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLD 361 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~ 361 (445)
..+++++|+++|++++|||.+.+-.. .......+.+.||+.
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~ 98 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT 98 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC
Confidence 48999999999999999999976221 223455678899997
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.34 E-value=4.1 Score=42.33 Aligned_cols=68 Identities=15% Similarity=0.087 Sum_probs=43.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~-----~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..+++++|+++||+++|||.+.+.... ......+.+.+|++......+- +..+++|+..+..+...++
T Consensus 32 ~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v------~~~CaSg~~al~~A~~~I~ 104 (426)
T PRK08170 32 VAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTV------QRNCASGMQALDSAAANIA 104 (426)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeec------cchhhHHHHHHHHHHHHHH
Confidence 489999999999999999988764221 1223456788999643211221 2236666666666655554
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.22 E-value=3.6 Score=42.85 Aligned_cols=68 Identities=26% Similarity=0.246 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC---Ch---HHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA---FA---SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~---~~---~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..+++.+|+++||+++|||.+..... +. .....+.+.||+++.+.. +. +..|+||+..+..+...++
T Consensus 42 ~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~~~-~v------~~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 42 KKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKPSK-RI------EGGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCceE-EE------eCCcHHHHHHHHHHHHHHH
Confidence 47899999999999999998766432 11 112335688999874432 22 3357888877888877775
Q ss_pred h
Q 013344 395 R 395 (445)
Q Consensus 395 ~ 395 (445)
.
T Consensus 115 s 115 (430)
T PRK06365 115 S 115 (430)
T ss_pred c
Confidence 3
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=81.24 E-value=6.6 Score=40.39 Aligned_cols=67 Identities=18% Similarity=0.174 Sum_probs=43.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----C-ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE-----A-FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~-----~-~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..+++++|+++||+++|||.+.... . .......+.+.||+...+... . +...++|...+..+...++
T Consensus 28 ~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~~~~-v------~~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 28 VVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAPVSS-S------YAACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCceec-c------cchhHHHHHHHHHHHHHHH
Confidence 4799999999999999999987531 1 112234577889996644322 2 3345566666666666665
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=80.08 E-value=4.3 Score=34.04 Aligned_cols=78 Identities=27% Similarity=0.396 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEE-EeccCCCcccchHHHHHHHHcCCC---CCCceEEec-----CcCcHHHHHHHH
Q 013344 77 DLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP---ETVPVRTVN-----RQCSSGLQAVAD 147 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~~dId~vi~-g~~~~~~~~~~~~a~~~~~~lGl~---~~~~~~~v~-----~~CsSgl~Al~~ 147 (445)
+-..+++++||++++|+|+|||.|.. |+.++.. .......+...++-. ..++...+. ...++|+..|..
T Consensus 25 ~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~--D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~ 102 (119)
T PF02801_consen 25 AALARAIRRALADAGISPEDIDYIEAHGTGTPLG--DAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAK 102 (119)
T ss_dssp HHHHHHHHHHHHHHTS-GGGEEEEE----SSHHH--HHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccccceeeeeeccccccc--hhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHH
Confidence 33367899999999999999998774 3222211 112233333333321 113333322 467899999999
Q ss_pred HHHHHHcCC
Q 013344 148 VAAAIKAGF 156 (445)
Q Consensus 148 A~~~I~sG~ 156 (445)
+..+++.|.
T Consensus 103 ~~l~l~~~~ 111 (119)
T PF02801_consen 103 ALLALEHGT 111 (119)
T ss_dssp HHHHHHHTE
T ss_pred HHHHHhcCC
Confidence 999998875
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 445 | ||||
| 2wu9_A | 442 | Crystal Structure Of Peroxisomal Kat2 From Arabidop | 0.0 | ||
| 2c7y_A | 404 | Plant Enzyme Length = 404 | 0.0 | ||
| 2wua_A | 440 | Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolas | 0.0 | ||
| 2iik_A | 418 | Crystal Structure Of Human Peroxisomal Acetyl-Coa A | 1e-110 | ||
| 1afw_A | 393 | The 1.8 Angstrom Crystal Structure Of The Dimeric P | 5e-79 | ||
| 1pxt_A | 390 | The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoac | 6e-79 | ||
| 1m1t_A | 392 | Biosynthetic Thiolase, Q64a Mutant Length = 392 | 6e-66 | ||
| 2vu2_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Wit | 2e-65 | ||
| 1dlu_A | 389 | Unliganded Biosynthetic Thiolase From Zoogloea Rami | 2e-65 | ||
| 2wku_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h M | 9e-65 | ||
| 2wkv_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-64 | ||
| 2wl5_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-64 | ||
| 1m1o_A | 392 | Crystal Structure Of Biosynthetic Thiolase, C89a Mu | 3e-64 | ||
| 2wl4_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 3e-64 | ||
| 1m4s_A | 392 | Biosynthetic Thiolase, Cys89 Acetylated, Unliganded | 4e-64 | ||
| 1qfl_A | 389 | Biosynthetic Thiolase From Zoogloea Ramigera In Com | 4e-64 | ||
| 2wl6_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h-H | 8e-64 | ||
| 2wl5_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 3e-63 | ||
| 2wl4_D | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 7e-63 | ||
| 2wl4_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 7e-63 | ||
| 1ulq_A | 401 | Crystal Structure Of Tt0182 From Thermus Thermophil | 1e-62 | ||
| 2wl4_B | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-61 | ||
| 4dd5_A | 396 | Biosynthetic Thiolase (Thla1) From Clostridium Diff | 6e-61 | ||
| 2wkt_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 9e-61 | ||
| 3ss6_A | 394 | Crystal Structure Of The Bacillus Anthracis Acetyl- | 5e-60 | ||
| 4e1l_A | 395 | Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla | 6e-60 | ||
| 1wdk_C | 390 | Fatty Acid Beta-Oxidation Multienzyme Complex From | 1e-59 | ||
| 2wkt_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-59 | ||
| 1wl4_A | 397 | Human Cytosolic Acetoacetyl-Coa Thiolase Complexed | 5e-56 | ||
| 3goa_A | 387 | Crystal Structure Of The Salmonella Typhimurium Fad | 6e-53 | ||
| 3svk_A | 407 | Crystal Structure Of Acetyl-Coa Acetyltransferase F | 2e-44 | ||
| 2ib7_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 4e-41 | ||
| 2f2s_A | 406 | Human Mitochondrial Acetoacetyl-Coa Thiolase Length | 2e-40 | ||
| 2ibu_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 6e-40 |
| >pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana Length = 442 | Back alignment and structure |
|
| >pdb|2C7Y|A Chain A, Plant Enzyme Length = 404 | Back alignment and structure |
|
| >pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From Sunflower Length = 440 | Back alignment and structure |
|
| >pdb|2IIK|A Chain A, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl Transferase 1 (Acaa1) Length = 418 | Back alignment and structure |
|
| >pdb|1AFW|A Chain A, The 1.8 Angstrom Crystal Structure Of The Dimeric Peroxisomal Thiolase Of Saccharomyces Cerevisiae Length = 393 | Back alignment and structure |
|
| >pdb|1PXT|A Chain A, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa Thiolase Of Saccharomyces Cerevisiae: A Five Layered A-B-A- B-A Structure, Constructed From Two Core Domains Of Identical Topology Length = 390 | Back alignment and structure |
|
| >pdb|1M1T|A Chain A, Biosynthetic Thiolase, Q64a Mutant Length = 392 | Back alignment and structure |
|
| >pdb|2VU2|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex With S- Pantetheine-11-pivalate. Length = 392 | Back alignment and structure |
|
| >pdb|1DLU|A Chain A, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera Length = 389 | Back alignment and structure |
|
| >pdb|2WKU|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|2WKV|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316d Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|1M1O|A Chain A, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant, Complexed With Acetoacetyl-Coa Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|1M4S|A Chain A, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form Length = 392 | Back alignment and structure |
|
| >pdb|1QFL|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex With A Reaction Intermediate. Length = 389 | Back alignment and structure |
|
| >pdb|2WL6|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8 Length = 401 | Back alignment and structure |
|
| >pdb|2WL4|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile Length = 396 | Back alignment and structure |
|
| >pdb|2WKT|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa Acetyltransferase Length = 394 | Back alignment and structure |
|
| >pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From Clostridium Difficile Length = 395 | Back alignment and structure |
|
| >pdb|1WDK|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 390 | Back alignment and structure |
|
| >pdb|2WKT|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|1WL4|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With Coa Length = 397 | Back alignment and structure |
|
| >pdb|3GOA|A Chain A, Crystal Structure Of The Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase Length = 387 | Back alignment and structure |
|
| >pdb|3SVK|A Chain A, Crystal Structure Of Acetyl-Coa Acetyltransferase From Mycobacterium Avium Length = 407 | Back alignment and structure |
|
| >pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-Coa Thiolase (T2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase Length = 406 | Back alignment and structure |
|
| >pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-coa Thiolase (t2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442 | Back alignment and structure |
|---|
Score = 682 bits (1763), Expect = 0.0
Identities = 366/439 (83%), Positives = 393/439 (89%), Gaps = 17/439 (3%)
Query: 22 SHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAP 81
+H++ + AGDSAAY RTS+YGDDVVIVAA+RT LCKSKRG FKDTYPDDLLAP
Sbjct: 2 AHHHHHHVDDDDKMAGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAP 61
Query: 82 VLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSG 141
VL+A+IEKTN++PSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV VRTVNRQCSSG
Sbjct: 62 VLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSG 121
Query: 142 LQAVADVAAAIKAGFYDIG-----------------SVNPKVKAFEQAQNCLLPMGVTSE 184
LQAVADVAAAIKAGFYDIG SVNP VK F QAQNCLLPMGVTSE
Sbjct: 122 LQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSE 181
Query: 185 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 244
NVA RFGV+R+EQDQAAVDSHRKAAAATAAGKFKDEIIPV TK+VDPKTGDEKP+T+SVD
Sbjct: 182 NVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVD 241
Query: 245 DGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFR 304
DGIRP T+++ L KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM+KGLP+LGVFR
Sbjct: 242 DGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFR 301
Query: 305 TFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK 364
TFAAVGVDPAIMG+GPAVAIPAAVK+AGL+LDDIDLFEINEAFASQFVYCRNKLGLDPEK
Sbjct: 302 TFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEK 361
Query: 365 INVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGDC 424
INVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFGV+SMCIGTGMGAAAVFERGD
Sbjct: 362 INVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDG 421
Query: 425 ADELCNVRKVESNNFLSKD 443
DEL N RKVE+ LSKD
Sbjct: 422 VDELRNARKVEAQGLLSKD 440
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
Score = 616 bits (1591), Expect = 0.0
Identities = 227/428 (53%), Positives = 294/428 (68%), Gaps = 29/428 (6%)
Query: 12 LEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFK 71
+ H +S L + A SA DVV+V RTA+C++ RGGFK
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMAPQASA---------ADVVVVHGRRTAICRAGRGGFK 51
Query: 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131
DT PD+LL+ V+ AV++ N+ P ++GDI VG VL PG A R+A F + PETVP+
Sbjct: 52 DTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPG-AGAIMARIAQFLSDIPETVPL 110
Query: 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVNPKVKAFEQAQN 174
TVNRQCSSGLQAVA +A I+ G YDIG ++ ++ E+A++
Sbjct: 111 STVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARD 170
Query: 175 CLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTG 234
CL+PMG+TSENVA RFG++R++QD A+ S +KAA A + G F+ EI+PV T + D K G
Sbjct: 171 CLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDK-G 229
Query: 235 DEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 294
++ +T++ D+GIRP+T++ LAKLKP FKKDG+TTAGNSSQVSDGA A+LL +RS A
Sbjct: 230 TKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEE 289
Query: 295 KGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYC 354
GLPILGV R++A VGV P IMG+GPA AIP A++ AGL + D+D+FEINEAFASQ YC
Sbjct: 290 LGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYC 349
Query: 355 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 414
KL L PEK+N GGA+A+GHPLG TGAR V TLL+E+KRRG+ +GV+SMCIGTGMG
Sbjct: 350 VEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKR-AYGVVSMCIGTGMG 408
Query: 415 AAAVFERG 422
AAAVFE
Sbjct: 409 AAAVFEYP 416
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393 | Back alignment and structure |
|---|
Score = 580 bits (1499), Expect = 0.0
Identities = 182/397 (45%), Positives = 244/397 (61%), Gaps = 39/397 (9%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK----TNVDPSEVGDIVVGTV 105
+DVVIVAA R+A+ K +G FKD D LL L I + D + + ++ G V
Sbjct: 10 EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNV 69
Query: 106 LAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG----- 160
L G A+E R A +G P + P +NRQCSSGL AV D+A IK G DIG
Sbjct: 70 LNVG-AGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGV 128
Query: 161 ---------------SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205
+ +++ +A+ CL+PMG+T+ENVA F ++RK+QD+ A +S+
Sbjct: 129 ESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSY 188
Query: 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 265
+KA A G F+DEI+P+ D+G RPN + L+ ++P F K
Sbjct: 189 QKAYKAKNEGLFEDEILPIKLP---------DGSICQSDEGPRPNVTAESLSSIRPAFIK 239
Query: 266 D-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAI 324
D GTTTAGN+SQVSDG VLL +RSVA + LP+LG + F VGV P IMGVGPA AI
Sbjct: 240 DRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAI 299
Query: 325 PAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGAR 384
P +++ GLQ+ DID+FEINEAFA+Q +YC +KLG+D K+N GGA+A+GHPLG TGAR
Sbjct: 300 PKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGAR 359
Query: 385 CVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
VAT+L E+K+ + GV+SMCIGTGMGAAA+F +
Sbjct: 360 QVATILRELKKD----QIGVVSMCIGTGMGAAAIFIK 392
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387 | Back alignment and structure |
|---|
Score = 464 bits (1197), Expect = e-163
Identities = 157/393 (39%), Positives = 215/393 (54%), Gaps = 31/393 (7%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
VVIV A RT + +SK G F++ +DL A ++++++ + ++ + + DI G V
Sbjct: 3 QVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTL 62
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---------- 159
Q + R AA A P +VP TVNR C S +QA+ D A I G +
Sbjct: 63 EQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMG 122
Query: 160 -------GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 212
+P + MG+T+E ++ G++R+ QDQ A SH +A AAT
Sbjct: 123 HVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAAT 180
Query: 213 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTTA 271
+G FK EIIP D + D+ IRP T+V L+ L+P F GT TA
Sbjct: 181 QSGAFKTEIIPTGGH-----DADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTA 235
Query: 272 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSA 331
G SS +SDGA A+L+M S A GL R+ A VG DP+IMG GP A A+K A
Sbjct: 236 GTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKA 295
Query: 332 GLQLDDIDLFEINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVAT 388
GL DID+FE+NEAFA+Q + C LGL EKIN+NGGA+A+GHPLG +GAR T
Sbjct: 296 GLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTT 355
Query: 389 LLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
L++ M+R+ +FG+ +MCIG G G A VFER
Sbjct: 356 LINLMERKDA--QFGLATMCIGLGQGIATVFER 386
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390 | Back alignment and structure |
|---|
Score = 464 bits (1197), Expect = e-163
Identities = 158/391 (40%), Positives = 215/391 (54%), Gaps = 27/391 (6%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPG 109
DVVIV RT + +SK G ++T +D+ A ++ V+E+ + VDP EV D++ G V
Sbjct: 6 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTL 65
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---------- 159
Q + RMA+ P T +TV+R C S + A+ A AI G D+
Sbjct: 66 EQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMG 125
Query: 160 -----GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 214
V+P A MG+T+E + G++R++QD AV SH+ A AT
Sbjct: 126 HVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVE 185
Query: 215 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK-KDGTTTAGN 273
GKFKDEIIP+ + D+ IRP+T++ LA LKP F K GT TAG
Sbjct: 186 GKFKDEIIPMQGY-----DENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGT 240
Query: 274 SSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGL 333
SSQ++DGA +++M A GL L V R+ A GVDPAIMG GP A A+K AGL
Sbjct: 241 SSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGL 300
Query: 334 QLDDIDLFEINEAFASQFVYCRNKLGL---DPEKINVNGGALAIGHPLGTTGARCVATLL 390
+ DID E+NEAFA+Q + L + EK+N++GGA+A+GHP G +GAR TLL
Sbjct: 301 NMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLL 360
Query: 391 HEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+ MK+ G FG+ +MCIG G G A VFER
Sbjct: 361 NVMKQNGG--TFGLSTMCIGLGQGIATVFER 389
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 | Back alignment and structure |
|---|
Score = 427 bits (1100), Expect = e-148
Identities = 147/403 (36%), Positives = 222/403 (55%), Gaps = 47/403 (11%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
+VVI AA R+ + + G K+ P +L PVL+ +++ V+P EV ++++G + +
Sbjct: 6 NVVITAAVRSPI-GTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCI-QRT 63
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---GSV----- 162
A+ R AA AGFP+TV T+ RQCSSG+QA+ A I+ G ++ G V
Sbjct: 64 DEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSS 123
Query: 163 ---------------NPKVK---------AFEQAQNCLLPMGVTSENVAHRFGVTRKEQD 198
+ +++ + MG T+EN+ ++ +TR+EQD
Sbjct: 124 SPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHH-----IMMGETAENLVEQYEITREEQD 178
Query: 199 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 258
+ A+ SH A A +G F D+I+P+ K K V S D+ R + + +LA
Sbjct: 179 EVALRSHTLALKAIESGYFDDQIVPITIK------ERRKEVVFSKDEHPRADITAEKLAG 232
Query: 259 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV 318
LKP F+KDG+ TAGN+S ++DG+ ++LM A KGL L ++ GVDP IMG+
Sbjct: 233 LKPAFRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGI 292
Query: 319 GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPL 378
GPA AI ++ L+D DL EINEAFA+Q++ +L LD EK+NVNG + +GHP+
Sbjct: 293 GPAPAIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPI 352
Query: 379 GTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
G TGAR +L+HE+KRRG G+ S+C+G G+G A E
Sbjct: 353 GCTGARITVSLIHELKRRGL--EKGIASLCVGGGIGVALFIEA 393
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401 | Back alignment and structure |
|---|
Score = 427 bits (1100), Expect = e-148
Identities = 159/411 (38%), Positives = 220/411 (53%), Gaps = 54/411 (13%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
+ IV A RT + K G PDDLLA L +++++ V EV D+ G G
Sbjct: 3 EAWIVEAVRTPIGK-HGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI----------- 159
+ RMA AGFP V TVNR C SGL+AVA A AI AG +
Sbjct: 62 DNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 121
Query: 160 --------------------------GSVNPKVK-AFEQAQNCLLPMGVTSENVAHRFGV 192
VNPK++ + MG T+EN+A +G+
Sbjct: 122 APYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGT-----ESMGETAENLAEMYGI 176
Query: 193 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTS 252
R+EQD+ A+ SH+KA A G+F+DE++PV K ++ + + D+G R +TS
Sbjct: 177 RREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVK------RGKEEILVEQDEGPRRDTS 230
Query: 253 VSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD 312
+ +LA L+PVF++ GT TAGNSS ++DGA AVLL+ A GL L R A GV
Sbjct: 231 LEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVP 290
Query: 313 PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGG 370
P IMG+GP A A++ AGL D+ L E+NEAFA+Q + + L + +++N NGG
Sbjct: 291 PRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGG 350
Query: 371 ALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
A+A+GHPLG +GAR + TL+HEM+RR +FG+ +MCIG G G A V E
Sbjct: 351 AIALGHPLGASGARILTTLVHEMRRRKV--QFGLATMCIGVGQGIAVVVEG 399
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407 | Back alignment and structure |
|---|
Score = 421 bits (1086), Expect = e-146
Identities = 133/413 (32%), Positives = 198/413 (47%), Gaps = 56/413 (13%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTN-VDPSEVGDIVVGTVLAPG 109
+ I A RT K K G + P +L+ ++ + + +D + + D+++G V G
Sbjct: 8 EAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVG 67
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---------- 159
Q R A AG PET +NR C+SGL+AV A +++G+ D+
Sbjct: 68 DQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMS 127
Query: 160 ----------GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAA 209
+ +P+ + +P G+ ++ +A G +R++ D A+ S +KAA
Sbjct: 128 RVPMGSDGGAWATDPETNY----RIGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAA 183
Query: 210 AATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 269
AA + G F ++PV V + D+ +RP+T++ LAKLK F G
Sbjct: 184 AAWSGGYFAKSVVPV--------RDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEM 235
Query: 270 ---------------------TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAA 308
T GNSS + DGA VL+ +GL A
Sbjct: 236 GGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATAT 295
Query: 309 VGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVN 368
G DP IM GP A + AGL +DDIDLFE+NEAFAS + + L + EK+NVN
Sbjct: 296 SGSDPVIMLTGPTPATRKVLDRAGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVN 355
Query: 369 GGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
GGA+A+GHPLG TGA T++ E++RR R +I++CIG GMG A + ER
Sbjct: 356 GGAIAMGHPLGATGAMITGTMVDELERRNA--RRALITLCIGGGMGVATIIER 406
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 | Back alignment and structure |
|---|
Score = 421 bits (1084), Expect = e-146
Identities = 150/405 (37%), Positives = 217/405 (53%), Gaps = 50/405 (12%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVL-APG 109
+VVI +A RTA+ G FK +L K I++ N+ P + + ++G VL A
Sbjct: 8 EVVIASAARTAVGSFG-GAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL 66
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSV------- 162
Q + R A AG P P T+N C SGL++V+ + I G DI V
Sbjct: 67 GQNIA--RQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMS 124
Query: 163 ----------------NPKVK----------AFEQAQNCLLPMGVTSENVAHRFGVTRKE 196
+ F MG+T+EN+A ++ +TR+E
Sbjct: 125 MSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNN-----YHMGITAENIAEQWNITREE 179
Query: 197 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 256
QD+ A+ S KA A A GKF +EI+PV K G + + D+ I+P T++ +L
Sbjct: 180 QDELALASQNKAEKAQAEGKFDEEIVPVVIK------GRKGDTVVDKDEYIKPGTTMEKL 233
Query: 257 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM 316
AKL+P FKKDGT TAGN+S ++DGA +++M + A G+ L ++ GVDP IM
Sbjct: 234 AKLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIM 293
Query: 317 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 376
G GP A A+++A + ++DIDL E NEAFA+Q V L +D K+NVNGGA+AIGH
Sbjct: 294 GYGPVPATKKALEAANMTIEDIDLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGH 353
Query: 377 PLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
P+G +GAR + TLL+EMKRR + G+ ++CIG GMG + +R
Sbjct: 354 PIGCSGARILTTLLYEMKRRDA--KTGLATLCIGGGMGTTLIVKR 396
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 | Back alignment and structure |
|---|
Score = 419 bits (1079), Expect = e-145
Identities = 152/404 (37%), Positives = 224/404 (55%), Gaps = 47/404 (11%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DVVIV+A RT + S G FK+T L +K I + ++ SE+ ++++G VL G
Sbjct: 6 DVVIVSAVRTPI-GSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTG- 63
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSV-------- 162
+ R A AG P +VP TVN+ C SGL++V A +I +G D+
Sbjct: 64 LGQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQ 123
Query: 163 ---------------NPKVK----------AFEQAQNCLLPMGVTSENVAHRFGVTRKEQ 197
N + AF Q MG+T+EN+A +F TR+ Q
Sbjct: 124 APYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQ-----YHMGITAENIATKFEFTREMQ 178
Query: 198 DQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 257
D+ A++S KA A +FK+EI+PV I + G TI D+ + + L+
Sbjct: 179 DKLALESQNKAENAIKNNRFKEEIVPVDVLI---RRGK--IETIDKDEYPKLGMTFEGLS 233
Query: 258 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG 317
KLKP FKKDGT TAGN+S ++DGA ++LM + A G+ L +++A+ GV+P +MG
Sbjct: 234 KLKPAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMG 293
Query: 318 VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHP 377
GP A A+K AGL ++DIDL E NEAFA+Q + +N+L +D K+NVNGGA+A+GHP
Sbjct: 294 TGPIPATRKALKKAGLSINDIDLIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHP 353
Query: 378 LGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+G +GAR + TL++EM++R G+ ++CIG G G + V R
Sbjct: 354 IGASGARILVTLIYEMQKRKV--ETGLATLCIGGGQGISMVVSR 395
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 | Back alignment and structure |
|---|
Score = 409 bits (1055), Expect = e-142
Identities = 161/404 (39%), Positives = 220/404 (54%), Gaps = 47/404 (11%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
+VI +A RTA+ S G F +T +L A V+ AV+E+ V EV ++++G VL P
Sbjct: 3 PSIVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVL-PA 60
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSV------- 162
+ + R AA AG P+ +N+ C SGL+AVA I G I
Sbjct: 61 GEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMS 120
Query: 163 ---------------NPKVK----------AFEQAQNCLLPMGVTSENVAHRFGVTRKEQ 197
+ K+ AF MG T+ENVA ++ ++R EQ
Sbjct: 121 MAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYG-----YHMGTTAENVAKQWQLSRDEQ 175
Query: 198 DQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 257
D AV S KA AA G+FKDEI+P K G + +T+ D+ IR ++ +A
Sbjct: 176 DAFAVASQNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMA 229
Query: 258 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG 317
KL+P F K+GT TAGN+S ++DGA A LLM + A R+G+ LG ++A VGVDP +MG
Sbjct: 230 KLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMG 289
Query: 318 VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHP 377
GP A A++ AG ++ D+DL E NEAFA+Q LG DP +NVNGGA+AIGHP
Sbjct: 290 TGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHP 349
Query: 378 LGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+G +GAR + TLL EMKRRG R G+ ++CIG GMG A E
Sbjct: 350 IGASGARILNTLLFEMKRRGA--RKGLATLCIGGGMGVAMCIES 391
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 | Back alignment and structure |
|---|
Score = 395 bits (1018), Expect = e-136
Identities = 153/408 (37%), Positives = 220/408 (53%), Gaps = 53/408 (12%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
D VVIV+A RT + S G DL + V+K V+++ V P +V +++ G VLA G
Sbjct: 6 DPVVIVSAARTII-GSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAG 64
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---------- 159
+ R A+ AG P +VP + C SGL+AV +I G I
Sbjct: 65 -CGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMS 123
Query: 160 --------------GSVNPKVK----------AFEQAQNCLLPMGVTSENVAHRFGVTRK 195
G + AF MG+T+ENVA ++ V+R+
Sbjct: 124 KAPHLAYLRTGVKIG--EMPLTDSILCDGLTDAFHN-----CHMGITAENVAKKWQVSRE 176
Query: 196 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSE 255
+QD+ AV S + A AG F EI+PV V + G + + D+ R +++
Sbjct: 177 DQDKVAVLSQNRTENAQKAGHFDKEIVPVL---VSTRKGL---IEVKTDEFPRHGSNIEA 230
Query: 256 LAKLKPVFKKDGTT--TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP 313
++KLKP F DGT T N+S ++DGA AV+LMK+S A ++GL L +++ VGV+P
Sbjct: 231 MSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEP 290
Query: 314 AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALA 373
+IMG+GP AI AV AG L+D+D+FEINEAFA+ +LGL+PEK+N+ GGA+A
Sbjct: 291 SIMGIGPIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIA 350
Query: 374 IGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+GHPLG +G R + TLLH ++R GR GV ++CIG GMG A +R
Sbjct: 351 LGHPLGASGCRILVTLLHTLERMGR--SRGVAALCIGGGMGIAMCVQR 396
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395 | Back alignment and structure |
|---|
Score = 355 bits (914), Expect = e-120
Identities = 125/404 (30%), Positives = 199/404 (49%), Gaps = 49/404 (12%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
+VVIV+A RT + S G L + ++ IEK + EV + +G VL G
Sbjct: 8 KEVVIVSATRTPI-GSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGG 66
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI----G----S 161
+A R A AG P + P T+N+ C+SG++A+ + ++ G D+ G S
Sbjct: 67 EGQAP-TRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMS 125
Query: 162 VNPKVK-----------------------AFEQAQNCLLPMGVTSENVAHRFGVTRKEQD 198
P V + + + MG +EN A + + R EQD
Sbjct: 126 NVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNK-----IHMGSCAENTAKKLNIARNEQD 180
Query: 199 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 258
A++S+ ++ AA AGKF +E+IPV +P + +D S++ K
Sbjct: 181 AYAINSYTRSKAAWEAGKFGNEVIPVTVT------VKGQPDVVVKEDEEYKRVDFSKVPK 234
Query: 259 LKPVFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG 317
LK VF+K+ GT TA N+S ++DGA A++LM A R + L FA V+P
Sbjct: 235 LKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFP 294
Query: 318 VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHP 377
+ P A +K GL+ +DI ++E+NEAF+ + L +DP+K+N+NGGA+++GHP
Sbjct: 295 IAPVYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHP 354
Query: 378 LGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+G +GAR V L H +K+ G+ S+C G G +A + ++
Sbjct: 355 IGMSGARIVGHLTHALKQGEY----GLASICNGGGGASAMLIQK 394
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 21/159 (13%), Positives = 46/159 (28%), Gaps = 28/159 (17%)
Query: 278 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-------VDPAIMGVGPAVAIPAAVKS 330
+ GAG ++M+ +A++ G+PI G+ A P + A ++VK
Sbjct: 1180 AQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKY 1239
Query: 331 AGLQLD--------DIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTG 382
A L+ +I + ++ + + +
Sbjct: 1240 ASPNLNMKYRKRQLVTREAQIKDWVENELEA-----------LKLEAEEIPSEDQNEFLL 1288
Query: 383 ARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
R + +E + + R + A
Sbjct: 1289 ER-TREIHNEAESQLRAAQQQ-WGNDFYKRDPRIAPLRG 1325
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 15/83 (18%), Positives = 23/83 (27%), Gaps = 19/83 (22%)
Query: 323 AIPAAVKSAGLQLDDIDLF-------EINEAFASQFVYCRNKLGLDPEKINVNGGALAIG 375
A A++ AG ++DI + LGL E+ + G
Sbjct: 243 AKTQALEDAGTAIEDIAHAVIPVSRRGTGHELH-------DLLGLPDERTSWA-----YG 290
Query: 376 HPLGTTGARCVATLLHEMKRRGR 398
G GA L +
Sbjct: 291 RTTGHVGAGDQYAGLAHLVENAL 313
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 445 | |||
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 100.0 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 100.0 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.96 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.96 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 99.96 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.95 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.95 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 99.95 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.95 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.95 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 99.95 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.94 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 99.94 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.94 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.94 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 99.94 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.94 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 99.94 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.93 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.93 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.93 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.93 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.93 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 99.93 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.93 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.93 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.93 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 99.93 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.93 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 99.93 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.93 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 99.93 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 99.93 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 99.93 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 99.92 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 99.92 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 99.92 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.92 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.92 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 99.92 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.91 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.91 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.91 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.9 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.9 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.9 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 99.9 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.89 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.89 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 99.89 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.89 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.89 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.89 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 99.88 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.86 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.85 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.84 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.84 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.83 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 99.83 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.82 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.79 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.79 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.77 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.7 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.69 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.64 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.62 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 93.1 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 88.71 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 88.5 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 87.25 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 86.42 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 86.39 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 85.74 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 85.51 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 85.37 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 85.28 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 84.96 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 84.82 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 84.64 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 84.57 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 84.37 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 83.86 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 83.36 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 83.29 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 83.26 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 83.2 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 82.85 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 82.12 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 82.12 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 81.77 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 81.63 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 80.87 |
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-69 Score=556.12 Aligned_cols=411 Identities=87% Similarity=1.280 Sum_probs=344.5
Q ss_pred cccccCCcccccccCCCCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcc
Q 013344 32 SACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ 111 (445)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~ 111 (445)
.+.+.+++....+....|++|||||++||||+++.+|.++++++.+|+.+|+++||+++|+++++||.|++|++.++...
T Consensus 12 ~~~~~~~~~~~~~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~ 91 (442)
T 2wu9_A 12 DDKMAGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQ 91 (442)
T ss_dssp --------------CCGGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHH
T ss_pred cccccCCcccCCcchhcCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCC
Confidence 34455666667777778889999999999999854478999999999999999999999999999999999998775432
Q ss_pred cchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc-cch------hh----hhhhc
Q 013344 112 RASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP-KVK------AF----EQAQN 174 (445)
Q Consensus 112 ~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~-~~~------~~----~~~~~ 174 (445)
++++++.++..+|++..+|+++|+++|+|+++||..|+++|++|+++++ + ++. .+. ++ .....
T Consensus 92 ~~~~a~~va~~lGl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~ 171 (442)
T 2wu9_A 92 RASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQN 171 (442)
T ss_dssp HHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHH
T ss_pred CChHHHHHHHHcCCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhcccccc
Confidence 4567888989999976799999999999999999999999999999998 2 211 000 00 00112
Q ss_pred cccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHH
Q 013344 175 CLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVS 254 (445)
Q Consensus 175 ~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e 254 (445)
...+|++++|+|+++||+|||++|.+++++|++|.+||.+|+|++||+|++++.++++.+.+...+++.|+++|+++|+|
T Consensus 172 ~~~~mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e 251 (442)
T 2wu9_A 172 CLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLA 251 (442)
T ss_dssp TTSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHH
T ss_pred chhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHH
Confidence 23579999999999999999999999999999999999999999999999886544322222236789999999999999
Q ss_pred HHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCC
Q 013344 255 ELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQ 334 (445)
Q Consensus 255 ~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~ 334 (445)
+|.++||+|+++|++|.+|||+++|||+++||++++.|++++.+|++++.+++..+..|..++.++..+++++|+++||+
T Consensus 252 ~~~~~rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~ 331 (442)
T 2wu9_A 252 SLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLE 331 (442)
T ss_dssp HHHTSCCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCC
T ss_pred HHhcCCCccCCCCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999988888888999999999999999999
Q ss_pred CCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC--CCCceeeEEEeeccc
Q 013344 335 LDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--RDCRFGVISMCIGTG 412 (445)
Q Consensus 335 ~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~--~~~~~G~~~~~~G~G 412 (445)
++|||+||+|++|+.+++.+++.||++++++|++||++++|||+|++|++++++++++|+++. . ++|++++|+|+|
T Consensus 332 ~~DId~iE~h~aft~~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~~~~--~~glas~~~GGG 409 (442)
T 2wu9_A 332 LDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDC--RFGVVSMCIGTG 409 (442)
T ss_dssp GGGCCEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHCTTC--CEEEEEEEETTT
T ss_pred HHHCCEEEEeCCChHHHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccCCCC--CEEEEEeecccc
Confidence 999999999999999999999999999999999999999999999999999999999999987 5 899999999999
Q ss_pred ceeEEEEEEccccccccccccccccccccccC
Q 013344 413 MGAAAVFERGDCADELCNVRKVESNNFLSKDV 444 (445)
Q Consensus 413 ~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (445)
++.+++|++.+.++.+.++++++..-++|||.
T Consensus 410 ~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (442)
T 2wu9_A 410 MGAAAVFERGDGVDELRNARKVEAQGLLSKDA 441 (442)
T ss_dssp EEEEEEEEECSHHHHHHTC-------------
T ss_pred hheEEEEEeccccccCCCccchhhcccccccC
Confidence 99999999999999999999999999999984
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-65 Score=524.40 Aligned_cols=370 Identities=60% Similarity=0.977 Sum_probs=333.9
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|+++||+|+.||||+++++|.++++++.+|+.+|+++||+++|+++++||.|++|++++++. ++++++.++..+|++.+
T Consensus 29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~-~~~~a~~~a~~lGl~~~ 107 (418)
T 2iik_A 29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA-GAIMARIAQFLSDIPET 107 (418)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTTCCTT
T ss_pred CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccc-cccHHHHHHHHcCCCCC
Confidence 57899999999999987667888999999999999999999999999999999999887764 56788888889999767
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCccc------------hhhhhhhccccchhHhHHHHHHHhC
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPKV------------KAFEQAQNCLLPMGVTSENVAHRFG 191 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~~------------~~~~~~~~~~~~mg~~ae~~a~~~g 191 (445)
+|+++|+++|+|+++||..|+++|++|++|++ +..+.. .......+...+|++++++++++||
T Consensus 108 ~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~g 187 (418)
T 2iik_A 108 VPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFG 187 (418)
T ss_dssp SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTT
T ss_pred ceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhC
Confidence 99999999999999999999999999999998 211110 0011112344679999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCcccc
Q 013344 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTA 271 (445)
Q Consensus 192 isre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~ 271 (445)
+|||++|.+++++|++|.+||.+|+|++||+|+++..++++ |+++.++++.|+.+|+.+|+|+|.++||+|+++|++|.
T Consensus 188 itre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~-~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~ 266 (418)
T 2iik_A 188 ISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTA 266 (418)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTT-SCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCS
T ss_pred CCHHHHHHHHHHHHHHHHhChhcCccccceeeeeecccccc-CcccceeeecccCcCCCCCHHHHhhCCCcccCCCceee
Confidence 99999999999999999999999999999999987655543 33334678999999999999999999999999999999
Q ss_pred CCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH
Q 013344 272 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF 351 (445)
Q Consensus 272 ~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~ 351 (445)
+|+++++|||+++||++++.|++++.+|++++.+++..+..|..++.++..+++++|+++||+++|||+||+|++|+.+.
T Consensus 267 ~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~~~~ 346 (418)
T 2iik_A 267 GNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQA 346 (418)
T ss_dssp TTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHH
T ss_pred ccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCeeeeeccchHHH
Confidence 99999999999999999999999999999999999988888888999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCc-eeeEEEeecccceeEEEEEEc
Q 013344 352 VYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCR-FGVISMCIGTGMGAAAVFERG 422 (445)
Q Consensus 352 ~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~-~G~~~~~~G~G~~~a~~l~~~ 422 (445)
+..++.||++++++|++||++++|||+|+||++++++++++|+++++ + +|++++|+|+|++.+++|++.
T Consensus 347 ~~~~~~lg~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~~~--~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 347 AYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGK--RAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp HHHHHHHTCCGGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTS--CEEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHcCCCccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhcCC--CeeeEEEEeeccchhheEEEecc
Confidence 99999999999999999999999999999999999999999999887 7 999999999999999999975
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-65 Score=516.29 Aligned_cols=365 Identities=43% Similarity=0.642 Sum_probs=331.0
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~A-gi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
|++|+|||++||||+++.+|.+++.++.+|+.+|+++||+++ ||+|++||.+++|++++++.+++++++.++..+|++.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 678999999999999865488999999999999999999999 9999999999999998887556788999999999987
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCcc---c--------hhhhhhhccccchhHhHHHHHHHhC
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPK---V--------KAFEQAQNCLLPMGVTSENVAHRFG 191 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~---~--------~~~~~~~~~~~~mg~~ae~~a~~~g 191 (445)
.+|+++|+++|+|+++||.+|+++|++|+++++ +..+. . .+..... ...+||+++++|+++||
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~-~~~~~g~~a~~~~~~~g 159 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAK-AAGMMGLTAEMLSRLHG 159 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC--------CCCHHHHHHHHHHTT
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCccccccccc-ccccHHHHHHHHHHHhC
Confidence 899999999999999999999999999999999 21111 0 0000011 14579999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC-CCccc
Q 013344 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTT 270 (445)
Q Consensus 192 isre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~-~G~~t 270 (445)
++||++|.+++++|++|.+|+.+|+|++||+|++++.+. | +..+++.|+.+|+++|+|+|.+++|+|++ +|++|
T Consensus 160 ~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~---~--~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t 234 (387)
T 3goa_A 160 ISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDAD---G--VLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVT 234 (387)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTT---S--CEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeecccc---C--cccccccccccCCCCCHHHHhcCCCcccCCCCcee
Confidence 999999999999999999999999999999999886432 2 22578999999999999999999999999 99999
Q ss_pred cCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH
Q 013344 271 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 350 (445)
Q Consensus 271 ~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~ 350 (445)
.+|+|+++||++++||++++.|++++.++++++.+++.....|..++.++..+++++|+++||+++|||++|+||+|+.+
T Consensus 235 ~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve~h~~f~~~ 314 (387)
T 3goa_A 235 AGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQ 314 (387)
T ss_dssp GGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHH
T ss_pred cccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchHH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCC---CCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 351 FVYCRNKLGL---DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 351 ~~~~~e~LGl---~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
.+.+.+.||+ ...|+|++||++++|||+|++|++++++++++|+++++ ++|++++|+|+|++.+++|++
T Consensus 315 ~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 315 ILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKDA--QFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp HHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhcCC--CEEEEEeccCcCceEEEEEEe
Confidence 9999999999 55689999999999999999999999999999999877 999999999999999999986
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-64 Score=514.70 Aligned_cols=364 Identities=40% Similarity=0.634 Sum_probs=330.2
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
+|++|||||++||||+++ .|.++++++.+|+.+|+++||+++|++++|||.+++|++++++. ++++++.++..+|++.
T Consensus 5 ~m~~v~Ivg~~rT~~~~~-~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~-~~~~a~~v~~~lGl~~ 82 (396)
T 4dd5_A 5 NMREVVIASAARTAVGSF-GGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL-GQNIARQIALGAGIPV 82 (396)
T ss_dssp -CCCEEEEEEEECCCEET-TSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCT
T ss_pred cCCcEEEEEcccCCeeec-CCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCC-CchHHHHHHHHcCCCC
Confidence 478999999999999985 46889999999999999999999999999999999999988875 6789999999999987
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc--cch---hh--------------hh---hhccccch
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP--KVK---AF--------------EQ---AQNCLLPM 179 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~--~~~---~~--------------~~---~~~~~~~m 179 (445)
++|+++|+++|+|+++||..|+++|++|.++++ + ++. ... .+ .+ .+.....|
T Consensus 83 ~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (396)
T 4dd5_A 83 EKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHM 162 (396)
T ss_dssp TSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEH
T ss_pred CceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchH
Confidence 799999999999999999999999999999998 1 111 100 00 00 01112479
Q ss_pred hHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcC
Q 013344 180 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 259 (445)
Q Consensus 180 g~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~ 259 (445)
++++++|+++||+|||++|.+++++|++|.+|+.+|+|++||+||+++.++ | ..++++|+++|+++|+|+|.++
T Consensus 163 ~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~---~---~~~~~~d~~~r~~~t~e~l~~~ 236 (396)
T 4dd5_A 163 GITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRK---G---DTVVDKDEYIKPGTTMEKLAKL 236 (396)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----------CEEECSCSCCCTTCCHHHHHHC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCC---C---ceeecCcccccCCCCHHHHhhC
Confidence 999999999999999999999999999999999999999999999875432 2 2678999999999999999999
Q ss_pred CCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 013344 260 KPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 260 ~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID 339 (445)
+|+|+|+|++|.+|+|+++||++++||++++.|++++.++++++.+++.....|..++.++..+++++|+++|++++|||
T Consensus 237 ~~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 316 (396)
T 4dd5_A 237 RPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDID 316 (396)
T ss_dssp CBSSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCS
T ss_pred CCccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHcC
Confidence 99999999999999999999999999999999999999999999999988888888899999999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEE
Q 013344 340 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 419 (445)
Q Consensus 340 ~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l 419 (445)
+||+||+|+...+.+.+.||++++++|++||++++|||+|++|++++++++++|+++++ ++|++++|+|+|++.+++|
T Consensus 317 ~ve~~d~f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~ 394 (396)
T 4dd5_A 317 LVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRRDA--KTGLATLCIGGGMGTTLIV 394 (396)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTC--SEEEEEEEETTTEEEEEEE
T ss_pred EEEecChHHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEcccCCceeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999988 9999999999999999999
Q ss_pred EE
Q 013344 420 ER 421 (445)
Q Consensus 420 ~~ 421 (445)
++
T Consensus 395 e~ 396 (396)
T 4dd5_A 395 KR 396 (396)
T ss_dssp EC
T ss_pred eC
Confidence 85
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-64 Score=514.27 Aligned_cols=364 Identities=40% Similarity=0.662 Sum_probs=332.9
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
.|++|+|||++||||+++ .|.++++++.+|+.+|+++||+++|++|++||.+++|++++++. ++++++.++..+|++.
T Consensus 3 ~m~~v~Ivg~~rT~~~~~-~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~-~~~~a~~i~~~lGl~~ 80 (394)
T 3ss6_A 3 AMHNVVITAAVRSPIGTF-GGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTD-EANTARTAALAAGFPD 80 (394)
T ss_dssp CCCCEEEEEEEECCCEET-TSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGG-GCSHHHHHHHHTTCCT
T ss_pred CCceEEEEEcccCCcccc-CCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCc-cchHHHHHHHHcCCCC
Confidence 378999999999999985 47889999999999999999999999999999999999998874 7789999999999987
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc--cch---hh----------------hhhhccccchh
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP--KVK---AF----------------EQAQNCLLPMG 180 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~--~~~---~~----------------~~~~~~~~~mg 180 (445)
++|+++|+++|+|++++|..|+++|++|.++++ + ++. ... .+ ...+....+||
T Consensus 81 ~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 160 (394)
T 3ss6_A 81 TVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMG 160 (394)
T ss_dssp TCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHH
T ss_pred CceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHH
Confidence 799999999999999999999999999999998 1 111 100 00 00112245799
Q ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCC
Q 013344 181 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 260 (445)
Q Consensus 181 ~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~ 260 (445)
+++++|+++||+|||++|.+++++|++|.+||++|+|++||+|++++.++ | ..++++|+++|+++|+|++.+++
T Consensus 161 ~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~---~---~~~~~~d~~~R~~~t~e~~~~~~ 234 (394)
T 3ss6_A 161 ETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERR---K---EVVFSKDEHPRADITAEKLAGLK 234 (394)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSS---C---EEEECSCCCCCTTCCHHHHHTCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCC---C---ceeecccccccCCCCHHHHhhCC
Confidence 99999999999999999999999999999999999999999999886432 2 25789999999999999999999
Q ss_pred CcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 013344 261 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 340 (445)
Q Consensus 261 p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~ 340 (445)
|+|+|+|++|.+|+|+++||++++||++++.|++++.++++++.+++.....|..++.++..+++++|+++|++++|||+
T Consensus 235 pvf~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ 314 (394)
T 3ss6_A 235 PAFRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADL 314 (394)
T ss_dssp BSSSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSE
T ss_pred CccCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999988888889999999999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEE
Q 013344 341 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420 (445)
Q Consensus 341 ~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~ 420 (445)
+|+||+|+.....+.+.||++++++|++||++++|||.|++|++++++++++|++++. ++|++++|+|+|++.+++|+
T Consensus 315 ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~e 392 (394)
T 3ss6_A 315 LEINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRRGL--EKGIASLCVGGGIGVALFIE 392 (394)
T ss_dssp EEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEETTTEEEEEEEE
T ss_pred EEeCCchHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccCcCceeEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999987 99999999999999999998
Q ss_pred E
Q 013344 421 R 421 (445)
Q Consensus 421 ~ 421 (445)
+
T Consensus 393 ~ 393 (394)
T 3ss6_A 393 A 393 (394)
T ss_dssp E
T ss_pred c
Confidence 7
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-63 Score=510.44 Aligned_cols=365 Identities=43% Similarity=0.657 Sum_probs=326.2
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|||||++||||+++ .|.++++++.+|+.+|+++||+++|+++++||.|++|++.+++.++++++..++..+|++.+
T Consensus 1 m~~v~Ivg~~rT~~~~~-~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 79 (401)
T 1ulq_A 1 MPEAWIVEAVRTPIGKH-GGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVE 79 (401)
T ss_dssp --CEEEEEEEECCCEET-TSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTT
T ss_pred CCceEEEEcccCCcccc-CCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCC
Confidence 56899999999999985 57889999999999999999999999999999999999887754356789999999999767
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--ccch------------hhhh---------hh--cc--
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PKVK------------AFEQ---------AQ--NC-- 175 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~~~------------~~~~---------~~--~~-- 175 (445)
+|+++++++|+|+++||..|+++|++|++|++ + ++ +... .+.+ .. +.
T Consensus 80 ~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~ 159 (401)
T 1ulq_A 80 VAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYG 159 (401)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSC
T ss_pred ccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccc
Confidence 99999999999999999999999999999998 2 21 1100 0000 00 11
Q ss_pred ccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHH
Q 013344 176 LLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSE 255 (445)
Q Consensus 176 ~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~ 255 (445)
..+|++++++|+++||+|||++|.++++||++|.+||.+|+|++||+|++++.++ | .+++++|+++|+++|+|+
T Consensus 160 ~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~---~---~~~~~~d~~~r~~~t~e~ 233 (401)
T 1ulq_A 160 TESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGK---E---EILVEQDEGPRRDTSLEK 233 (401)
T ss_dssp CCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETT---E---EEEECSCSCCCTTCCHHH
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCC---C---ceeeccccccCCCCCHHH
Confidence 2458999999999999999999999999999999999999999999999875432 2 257899999999999999
Q ss_pred HhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCC
Q 013344 256 LAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQL 335 (445)
Q Consensus 256 l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~ 335 (445)
|.++||+|+++|++|.+|||+++|||+++||++++.|++++.++++++.+++.....|..++.++..+++++|+++|+++
T Consensus 234 ~~~~rpif~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~ 313 (401)
T 1ulq_A 234 LAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSF 313 (401)
T ss_dssp HHHSCBSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCG
T ss_pred HhhCCCccCCCCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCH
Confidence 99999999999999999999999999999999999999999999999999999888888889999999999999999999
Q ss_pred CCccEEEecCCChHHHHHHHHHcCC--CCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccc
Q 013344 336 DDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGM 413 (445)
Q Consensus 336 ~DID~~e~h~~~~~~~~~~~e~LGl--~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~ 413 (445)
+|||+||+||+|+.+.+.++|.||+ +.+|+|++||++++|||+|++|++++++++++|++++. ++|++++|.|+|+
T Consensus 314 ~dId~ie~heafa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~ 391 (401)
T 1ulq_A 314 SDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKV--QFGLATMCIGVGQ 391 (401)
T ss_dssp GGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTE
T ss_pred HHcCEEEEecchHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhcCC--CEEEEEeecCCcc
Confidence 9999999999999999999999999 55789999999999999999999999999999999877 9999999999999
Q ss_pred eeEEEEEEc
Q 013344 414 GAAAVFERG 422 (445)
Q Consensus 414 ~~a~~l~~~ 422 (445)
+.+++|++.
T Consensus 392 ~~a~v~~~~ 400 (401)
T 1ulq_A 392 GIAVVVEGM 400 (401)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEeC
Confidence 999999873
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-64 Score=515.08 Aligned_cols=363 Identities=37% Similarity=0.598 Sum_probs=311.8
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~-Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
+++|||||++||||+|++.|.++++++.+|+.+|+++||++ +||+|+|||.+++|+++++..+++++++.++..+|+|.
T Consensus 6 ~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~ 85 (407)
T 3svk_A 6 SEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPE 85 (407)
T ss_dssp -CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCT
T ss_pred CCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCC
Confidence 36899999999999976678999999999999999999999 99999999999999998876445678999999999987
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCcc---ch---hh-----hhhhccccchhHhHHHHHHHhC
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPK---VK---AF-----EQAQNCLLPMGVTSENVAHRFG 191 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~---~~---~~-----~~~~~~~~~mg~~ae~~a~~~g 191 (445)
.+|+++|+++|+|++++|..|+++|++|+++++ +..+. .. .+ ........+||+++|+++++|+
T Consensus 86 ~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a~~~~ 165 (407)
T 3svk_A 86 TTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIATLEG 165 (407)
T ss_dssp TCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred CCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHHHHhC
Confidence 899999999999999999999999999999998 21111 00 00 0112233579999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCcc--
Q 013344 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT-- 269 (445)
Q Consensus 192 isre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~-- 269 (445)
++||++|.|++.+|++|..+.++|+|++||+|++.+ + | ..++++|+++|+++|+|+|.+++|+|+|+|.+
T Consensus 166 i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~----~-g---~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~ 237 (407)
T 3svk_A 166 FSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQ----N-G---LVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGG 237 (407)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECT----T-S---CEEECSCTTCCTTCCHHHHHTSCBSCC-------
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecC----C-C---ceeeCCccccCCCCCHHHHhhCCCeecCCCcccc
Confidence 999999999999999999999999999999999732 1 2 25688999999999999999999999987764
Q ss_pred -------------------ccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHH
Q 013344 270 -------------------TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKS 330 (445)
Q Consensus 270 -------------------t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~ 330 (445)
|.+|||+++||++++||++++.|++++.++++++.+++..+.+|..++.++..+++++|++
T Consensus 238 ~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~ 317 (407)
T 3svk_A 238 FDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPTPATRKVLDR 317 (407)
T ss_dssp ------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998888888999999999999999
Q ss_pred cCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeec
Q 013344 331 AGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIG 410 (445)
Q Consensus 331 aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G 410 (445)
+||+++|||+||+||+|+.+.+.+.+.||++++++|++||++++|||+|++|+++++++++||++++. ++|++++|+|
T Consensus 318 Agl~~~dId~~e~hdaf~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~g 395 (407)
T 3svk_A 318 AGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERRNA--RRALITLCIG 395 (407)
T ss_dssp HTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHHTC--CEEEEEEECS
T ss_pred cCCCHHHCCEEEEeChhHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987 9999999999
Q ss_pred ccceeEEEEEE
Q 013344 411 TGMGAAAVFER 421 (445)
Q Consensus 411 ~G~~~a~~l~~ 421 (445)
+|++.+++|++
T Consensus 396 gG~g~a~~~e~ 406 (407)
T 3svk_A 396 GGMGVATIIER 406 (407)
T ss_dssp SSCEEEEEEEE
T ss_pred CcceEEEEEEc
Confidence 99999999987
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-63 Score=509.24 Aligned_cols=359 Identities=51% Similarity=0.818 Sum_probs=322.5
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcC----CCCCCCCcEEEEeccCCCcccchHHHHHHHHcC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTN----VDPSEVGDIVVGTVLAPGSQRASECRMAAFYAG 124 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Ag----i~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lG 124 (445)
|++|||||++||||+++++|.++++++.+|+.+|+++||+++| |++++||.|++|++.+++. ++++++.++..+|
T Consensus 9 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~-~~~~a~~va~~lG 87 (393)
T 1afw_A 9 PEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGA-GATEHRAACLASG 87 (393)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTT
T ss_pred CCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCC-CChHHHHHHHHcC
Confidence 4889999999999998535789999999999999999999999 9999999999999887764 5678899999999
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc-cchh----------h---hhhhccccchhHhHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP-KVKA----------F---EQAQNCLLPMGVTSE 184 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~-~~~~----------~---~~~~~~~~~mg~~ae 184 (445)
++.++|+++|+++|+|+++||..|+++|++|++|++ + ++. .+.. + ...+....+|+++++
T Consensus 88 l~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~ 167 (393)
T 1afw_A 88 IPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNE 167 (393)
T ss_dssp CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHH
T ss_pred CCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHH
Confidence 976799999999999999999999999999999998 1 111 0000 0 001112356999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCccc
Q 013344 185 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 264 (445)
Q Consensus 185 ~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~ 264 (445)
+|+++||+|||++|.+++++|++|.+||++|+|++||+|++++. | + ++++|+.+|+++|+|+|.++||+|+
T Consensus 168 ~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~-----~---~-~~~~d~~~r~~~t~e~~~~~rpvf~ 238 (393)
T 1afw_A 168 NVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD-----G---S-ICQSDEGPRPNVTAESLSSIRPAFI 238 (393)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT-----S---C-EECSCSSCCSCCCHHHHHHCCBSCC
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC-----C---c-eeccccccCCCCCHHHHhcCCCccc
Confidence 99999999999999999999999999999999999999997632 2 1 6899999999999999999999998
Q ss_pred CC-CccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEe
Q 013344 265 KD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343 (445)
Q Consensus 265 ~~-G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~ 343 (445)
++ |++|.+|+|+++|||+++||++++.|++++.++++++.+++..+..|..++.++..+++++|+++||+++|||+||+
T Consensus 239 ~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~ 318 (393)
T 1afw_A 239 KDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEI 318 (393)
T ss_dssp ---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred CCCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 88 99999999999999999999999999999999999999999988888888889999999999999999999999999
Q ss_pred cCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 344 h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
|++|+.+.+.+++.||++++++|++||++++|||+|++|++++++++++|+++++ |++++|+|+|++.+++|++
T Consensus 319 h~~ft~~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~----gl~~~c~ggg~g~a~~~~~ 392 (393)
T 1afw_A 319 NEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQI----GVVSMCIGTGMGAAAIFIK 392 (393)
T ss_dssp CCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTCE----EEEEEEETTTEEEEEEEEE
T ss_pred eccCHHHHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcCC----cEEEEeecccceEEEEEEe
Confidence 9999999999999999999999999999999999999999999999999987643 9999999999999999987
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-63 Score=506.93 Aligned_cols=365 Identities=41% Similarity=0.641 Sum_probs=331.7
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
.|++|||||++||||+++ .|.++++++.+|+.+|+++||+++|++|++||.+++|++++++. ++++++.++..+|++.
T Consensus 3 ~m~~v~Ivg~~rT~~g~~-~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~-~~~~a~~~~~~lGl~~ 80 (395)
T 4e1l_A 3 AMKDVVIVSAVRTPIGSF-GGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGL-GQNVARQIAINAGIPN 80 (395)
T ss_dssp CCCCEEEEEEEECCCEET-TSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSST-TCCHHHHHHHHTTCCT
T ss_pred CCCeEEEEECccCCcccc-CCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cchHHHHHHHHcCCCC
Confidence 478999999999999985 57889999999999999999999999999999999999988775 6789999999999987
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc--cch---hh--------------hh---hhccccch
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP--KVK---AF--------------EQ---AQNCLLPM 179 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~--~~~---~~--------------~~---~~~~~~~m 179 (445)
++|+++|+++|+|++++|..|+++|++|.++++ + ++. ... .+ .+ .+.....|
T Consensus 81 ~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (395)
T 4e1l_A 81 SVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHM 160 (395)
T ss_dssp TSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHH
T ss_pred CceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchH
Confidence 899999999999999999999999999999998 2 211 000 00 00 01112468
Q ss_pred hHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcC
Q 013344 180 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 259 (445)
Q Consensus 180 g~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~ 259 (445)
|+++++|+++||++||++|.+++++|++|.+|+.+|+|++||+||+++.++ | +..++++|+.+|+++|+|+|.++
T Consensus 161 g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~---g--~~~~~~~d~~~r~~~t~e~l~~~ 235 (395)
T 4e1l_A 161 GITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRR---G--KIETIDKDEYPKLGMTFEGLSKL 235 (395)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEET---T--EEEEECSCSCCCTTCCHHHHHHC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCC---C--cceEECCccccCCCCCHHHHhhC
Confidence 999999999999999999999999999999999999999999999876532 1 12468899999999999999999
Q ss_pred CCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 013344 260 KPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 260 ~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID 339 (445)
+|+|+++|++|.+|+|+++||++++||++++.|++++.++++++.+++.....|..++.++..+++++|+++|++++|||
T Consensus 236 ~~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId 315 (395)
T 4e1l_A 236 KPAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDID 315 (395)
T ss_dssp CBSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCS
T ss_pred CCccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcC
Confidence 99999999999999999999999999999999999999999999999998888888999999999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEE
Q 013344 340 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 419 (445)
Q Consensus 340 ~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l 419 (445)
+||+||+|+.....+.+.||++++++|++||++++|||+|++|++++++++++|++++. ++|++++|+|+|++.+++|
T Consensus 316 ~ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~ 393 (395)
T 4e1l_A 316 LIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKV--ETGLATLCIGGGQGISMVV 393 (395)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHHTC--SEEEEEEESSTTEEEEEEE
T ss_pred EEEecChhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccCCCceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999988 9999999999999999999
Q ss_pred EE
Q 013344 420 ER 421 (445)
Q Consensus 420 ~~ 421 (445)
++
T Consensus 394 e~ 395 (395)
T 4e1l_A 394 SR 395 (395)
T ss_dssp EC
T ss_pred eC
Confidence 75
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-62 Score=499.91 Aligned_cols=363 Identities=43% Similarity=0.664 Sum_probs=327.7
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|+|||++||||++ +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+++. +.++++.++..+|++.+
T Consensus 2 m~~v~Ivg~~~t~~g~-~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~ia~~lgl~~~ 79 (392)
T 2vu1_A 2 TPSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE-GQNPARQAAMKAGVPQE 79 (392)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCCEEEEEeeecCccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CcHHHHHHHHHcCCCCC
Confidence 6789999999999998 457889999999999999999999999999999999999887664 66889999999999755
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc--cc--------------hhh--hhh---hccccchhH
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP--KV--------------KAF--EQA---QNCLLPMGV 181 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~--~~--------------~~~--~~~---~~~~~~mg~ 181 (445)
.|+++++++|+|++.||..|+++|++|++|++ + ++. .. .+. ... ......|++
T Consensus 80 ~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (392)
T 2vu1_A 80 ATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGT 159 (392)
T ss_dssp SEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHH
T ss_pred ceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHH
Confidence 89999999999999999999999999999998 1 211 10 000 000 001135999
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
.+++|+++||+|||++|.+++++|++|.+||++|+|++||+|++++.+ +| ...++.|+++|+++|+|+|.+++|
T Consensus 160 ~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~---~~---~~~f~~d~~~r~~~t~e~~~~~~~ 233 (392)
T 2vu1_A 160 TAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGR---KG---DITVDADEYIRHGATLDSMAKLRP 233 (392)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCT---TC---CEEECSCSSCCTTCCHHHHHTCCC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccC---CC---ceeeccccccCCCCCHHHHhcCCC
Confidence 999999999999999999999999999999999999999999987432 12 257899999999999999999999
Q ss_pred cccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 013344 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 341 (445)
Q Consensus 262 ~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~ 341 (445)
+|+++|++|.+|||+++|||+++||++++.|++++.++++++.+++.....|..++.++..+++++|+++|++++|||+|
T Consensus 234 v~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~i 313 (392)
T 2vu1_A 234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLV 313 (392)
T ss_dssp SSCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEE
T ss_pred ccCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEE
Confidence 99889999999999999999999999999999999999999999999888888889999999999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 342 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 342 e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
|+||+|+.+.+.+.+.||++++++|++||++++|||+|++|++++++++++|+++++ ++|++++|+|+|++.+++|++
T Consensus 314 e~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 314 EANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGA--RKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp EECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHHTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred EeccccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhccCC--CEEEEEEecccchheEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999887 999999999999999999886
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-62 Score=499.21 Aligned_cols=364 Identities=41% Similarity=0.670 Sum_probs=328.2
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|||||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+++. ++++++.++..+|++.+
T Consensus 5 ~~~v~Ivg~~~tp~g~-~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~-~~~~a~~ia~~lgl~~~ 82 (397)
T 1wl4_A 5 SDPVVIVSAARTIIGS-FNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGC-GQNPVRQASVGAGIPYS 82 (397)
T ss_dssp CSCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCcEEEEEcccCCcee-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CCHHHHHHHHHcCCCCC
Confidence 4689999999999997 457888999999999999999999999999999999999887654 56789999999999767
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccchh--h---------hh-----h-hcc--ccchhH
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKVKA--F---------EQ-----A-QNC--LLPMGV 181 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~~~--~---------~~-----~-~~~--~~~mg~ 181 (445)
+|+++++++|+|++.||..|+++|++|++|++ .++ +.... + .+ . .+. ...|++
T Consensus 83 ~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~ 162 (397)
T 1wl4_A 83 VPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGI 162 (397)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHH
T ss_pred ccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHH
Confidence 99999999999999999999999999999998 222 11100 0 00 0 011 145999
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
.+|+|+++||+|||++|.+++++|++|.+|+.+|+|++||+||+++.++ | ++++++|+.+|+++|+|+|.++||
T Consensus 163 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~---~---~~~~~~d~~~r~~~t~e~~~~~rp 236 (397)
T 1wl4_A 163 TAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRK---G---LIEVKTDEFPRHGSNIEAMSKLKP 236 (397)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETT---E---EEEECSCSCCCTTCCHHHHHTSCC
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCC---C---ceeeccccccCCCCCHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999875432 2 256788999999999999999999
Q ss_pred cccCC--CccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 013344 262 VFKKD--GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 262 ~~~~~--G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID 339 (445)
+|+++ |++|.+|||+++|||+++||++++.|++++.++++++.+++.....|..++.++..+++++|+++||+++|||
T Consensus 237 vfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 316 (397)
T 1wl4_A 237 YFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVD 316 (397)
T ss_dssp SSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCC
T ss_pred ccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCC
Confidence 99885 8999999999999999999999999999999999999999998888888899999999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEE
Q 013344 340 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 419 (445)
Q Consensus 340 ~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l 419 (445)
+||+||+|+.+.+.+.+.||++++++|++||++++|||+|++|++++++++++|++++. ++|++++|.|+|++.+++|
T Consensus 317 ~ie~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~~a~~~ 394 (397)
T 1wl4_A 317 IFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGR--SRGVAALCIGGGMGIAMCV 394 (397)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEETTTEEEEEEE
T ss_pred EEEEecccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhcCC--CEEEEEEecccchheEEEE
Confidence 99999999999999999999999999999999999999999999999999999999877 9999999999999999999
Q ss_pred EEc
Q 013344 420 ERG 422 (445)
Q Consensus 420 ~~~ 422 (445)
+++
T Consensus 395 e~~ 397 (397)
T 1wl4_A 395 QRE 397 (397)
T ss_dssp EEC
T ss_pred EeC
Confidence 873
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-61 Score=493.96 Aligned_cols=367 Identities=43% Similarity=0.619 Sum_probs=328.2
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~A-gi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~ 126 (445)
+|++|||||++||||++..+|.++++++.+|+.+|+++||+++ |+++++||.+++|++.+++..+.++++.++..+|++
T Consensus 3 ~m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~ 82 (390)
T 1wdk_C 3 NPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIP 82 (390)
T ss_dssp CTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSC
T ss_pred CCCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCC
Confidence 4789999999999999742578889999999999999999999 999999999999998877643467899999999997
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--cc-chhh-----h-hhhccccchhHhHHHHHHHhC
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PK-VKAF-----E-QAQNCLLPMGVTSENVAHRFG 191 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~-~~~~-----~-~~~~~~~~mg~~ae~~a~~~g 191 (445)
.++|.++++++|+|++.||..|+++|++|++|++ + ++ +. ...+ . +..+...+|++++++|+++||
T Consensus 83 ~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 162 (390)
T 1wdk_C 83 HTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHG 162 (390)
T ss_dssp TTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHHHHT
T ss_pred CCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHHHhC
Confidence 7899999999999999999999999999999998 2 21 11 0000 0 011223459999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC-CCccc
Q 013344 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTT 270 (445)
Q Consensus 192 isre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~-~G~~t 270 (445)
+|||++|.+++++|++|.+|+++|+|.+||+|++++.+. + +...+++|+++|+++|+|+|.+++|+|+| +|++|
T Consensus 163 ~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~---~--~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt 237 (390)
T 1wdk_C 163 ISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDEN---G--FLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVT 237 (390)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTT---C--CEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCC---C--cceeeccccccCCCCCHHHHhcCCCcccCCCCcEe
Confidence 999999999999999999999999999999999763211 1 11368899999999999999999999999 99999
Q ss_pred cCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH
Q 013344 271 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 350 (445)
Q Consensus 271 ~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~ 350 (445)
.+|||+++|||+++||++++.|++++.++++++.+++..+..|..++.++..+++++|+++|++++|||+||+||+|+.+
T Consensus 238 ~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~~~ 317 (390)
T 1wdk_C 238 AGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQ 317 (390)
T ss_dssp GGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHH
T ss_pred chhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhCcEEEeccCCHHH
Confidence 99999999999999999999999999999999999999888888888999999999999999999999999999999999
Q ss_pred HHHHHHHcCCC---CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 351 FVYCRNKLGLD---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 351 ~~~~~e~LGl~---~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
.+.+.+.||++ .+++|++||++++|||+|++|++++++++++|+++++ ++|++++|.|+|++.+++|++
T Consensus 318 ~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 318 ALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGG--TFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp HHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhcCC--CEEEEEecccchheEEEEEEe
Confidence 99999999999 6799999999999999999999999999999999877 999999999999999999886
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-59 Score=477.35 Aligned_cols=362 Identities=33% Similarity=0.554 Sum_probs=322.7
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
.|++|||||++||||+++ .|.++++++.+|+.+|+++||+++|+++++||.+++|++.+++. +++++..++..+|++.
T Consensus 6 ~~~~v~Ivg~~rTp~g~~-~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~va~~lgl~~ 83 (395)
T 2ib8_A 6 TLKEVVIVSATRTPIGSF-LGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGE-GQAPTRQAVLGAGLPI 83 (395)
T ss_dssp BCCCEEEEEEEECCCEET-TSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCT
T ss_pred CCCCeEEEeccccccccc-CCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CchHHHHHHHHcCCCC
Confidence 468899999999999974 57888999999999999999999999999999999999987765 6788999999999976
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc--cch-h----hh----------hh---hccccchhH
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP--KVK-A----FE----------QA---QNCLLPMGV 181 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~--~~~-~----~~----------~~---~~~~~~mg~ 181 (445)
++|+++++++|+|++.||..|+++|++|++|++ + ++. ... . +. .. .....+|++
T Consensus 84 ~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~ 163 (395)
T 2ib8_A 84 STPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGS 163 (395)
T ss_dssp TCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHH
T ss_pred CceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHH
Confidence 799999999999999999999999999999998 1 111 100 0 00 00 011246999
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
++++|+++||+|||++|.+++++|++|.+|+.+++|++||+|+++..+ . ..+.+++.|+.+| ++++|+|.+++|
T Consensus 164 ~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~----~-~p~~~~~~D~~~r-~~~~~~l~~l~~ 237 (395)
T 2ib8_A 164 CAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVK----G-QPDVVVKEDEEYK-RVDFSKVPKLKT 237 (395)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCT----T-SCCEEECSCSGGG-SCCTTTGGGSCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeeccc----C-Ccceeeccccccc-cCCHHHHhcCCc
Confidence 999999999999999999999999999999999999999999987431 0 1125788999999 588999999999
Q ss_pred cccC-CCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 013344 262 VFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 340 (445)
Q Consensus 262 ~~~~-~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~ 340 (445)
+|.+ +|++|.+|||+++|||+++||++++.|++++.++++++.+++....+|..++.++..+++++|+++|++++|||+
T Consensus 238 ~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ 317 (395)
T 2ib8_A 238 VFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAM 317 (395)
T ss_dssp TTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEE
T ss_pred cccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcCE
Confidence 9954 899999999999999999999999999999999999999999877788888888999999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEE
Q 013344 341 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420 (445)
Q Consensus 341 ~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~ 420 (445)
||+||+|+.+.+...|.||++++++|++||++++|||+|++|++++++++++|++ + ++|++++|.|+|++.+++|+
T Consensus 318 ie~~D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~--~--~~gl~~~~~ggG~g~a~~~~ 393 (395)
T 2ib8_A 318 WEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ--G--EYGLASICNGGGGASAMLIQ 393 (395)
T ss_dssp EEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT--T--CEEEEEEEETTTEEEEEEEE
T ss_pred EEEccccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh--C--CceEEEEecccCHhheEEEE
Confidence 9999999999999999999999999999999999999999999999999999987 4 78999999999999999998
Q ss_pred E
Q 013344 421 R 421 (445)
Q Consensus 421 ~ 421 (445)
+
T Consensus 394 ~ 394 (395)
T 2ib8_A 394 K 394 (395)
T ss_dssp E
T ss_pred c
Confidence 7
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-48 Score=405.37 Aligned_cols=347 Identities=15% Similarity=0.150 Sum_probs=275.7
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCc-----------ccchHHHH
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS-----------QRASECRM 118 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~-----------~~~~~a~~ 118 (445)
+..||||+++|++.+ .+|.+++.++.||+.+|+++||+|+||++++||.+|.|++..... +..++++.
T Consensus 18 RtPVIVGvG~t~~r~-~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 96 (520)
T 4egv_A 18 RTPVIVGVGQFTERI-DLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRS 96 (520)
T ss_dssp TCEEEEEEEEEEC---------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHH
T ss_pred CCeEEEEeeeccccC-CCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHH
Confidence 567899999999975 457888999999999999999999999999999888776532221 13457788
Q ss_pred HHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCc--cchh------hh-----hhhccccch
Q 013344 119 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNP--KVKA------FE-----QAQNCLLPM 179 (445)
Q Consensus 119 ~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~--~~~~------~~-----~~~~~~~~m 179 (445)
++..+|++ ..+.+.++.+|+|++++|..|++.|++|++|++ .++. .+.. +. ...+..+.|
T Consensus 97 va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (520)
T 4egv_A 97 VARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGY 175 (520)
T ss_dssp HHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-----------------------------
T ss_pred HHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCcccccccccccccccc
Confidence 88899997 478889999999999999999999999999999 2221 1110 10 112234567
Q ss_pred hHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcC
Q 013344 180 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 259 (445)
Q Consensus 180 g~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~ 259 (445)
+..+++++.+||+++++++.+...++.++..+...+.|++||+||.++... ....++++.+|+++|+|++.++
T Consensus 176 ~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~-------~a~~np~a~~r~~~t~E~l~~l 248 (520)
T 4egv_A 176 DGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSK-------VAAKNPYSSAPTERSVEELLTV 248 (520)
T ss_dssp -----CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-------HHHHCTTSSSCCCCCHHHHHSC
T ss_pred chhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEeccc-------ccccCccccccCCCCHHHhccc
Confidence 788899999999999999999999999999999999999999999765321 1234567788999999999999
Q ss_pred CCcccC--CCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCC--------CccHHHHHHHHHH
Q 013344 260 KPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM--------GVGPAVAIPAAVK 329 (445)
Q Consensus 260 ~p~~~~--~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~--------~~~~~~ai~~aL~ 329 (445)
+|.|.+ ++.+|.+|||+++|||+|+||++++.|+++|+++++++..++.....|..+ +.++..+++++|+
T Consensus 249 ~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~ 328 (520)
T 4egv_A 249 TASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALR 328 (520)
T ss_dssp CSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHH
T ss_pred CcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHH
Confidence 998864 677789999999999999999999999999999998888887776655443 3456789999999
Q ss_pred HcCCCCCCccEEEecCCChHHHHHHHHHcCCCC---CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEE
Q 013344 330 SAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 406 (445)
Q Consensus 330 ~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~---~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~ 406 (445)
++||+++|||+||+||+|+.+.+.+++.|||++ .++|++||++++|||+|++|+..++++++||+++.+ ++|+..
T Consensus 329 ~agl~~~did~~E~~dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~--~~~L~~ 406 (520)
T 4egv_A 329 VAGIGLDDVAAFDLYSCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPG--QFALVG 406 (520)
T ss_dssp HHTCCGGGEEEEEECCSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTT--CEEEEE
T ss_pred HhCCCHHHCCEEEEeCCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCC--CceEEe
Confidence 999999999999999999999999999999964 589999999999999999999999999999999888 888876
Q ss_pred E
Q 013344 407 M 407 (445)
Q Consensus 407 ~ 407 (445)
-
T Consensus 407 ~ 407 (520)
T 4egv_A 407 A 407 (520)
T ss_dssp E
T ss_pred C
Confidence 4
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-29 Score=247.56 Aligned_cols=262 Identities=24% Similarity=0.205 Sum_probs=196.1
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+.||. .||++.+|+ ...++++..+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|++.+++
T Consensus 44 ~~~i~--~rtgi~~r~-~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lgl~~~~~ 119 (333)
T 4dfe_A 44 DEWIV--ARTGIHARY-FAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFV-FPSTACLLQNKLGIRNHGA 119 (333)
T ss_dssp HHHHH--HHHCCSEEE-ECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHTTCCSCCE
T ss_pred HHHhH--HhcCceEEE-EcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHhCCCCCCc
Confidence 45555 689998765 3667899999999999999999999999999999999988775 4567888999999976899
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~ 210 (445)
+++++++|+|++.||..|+++|++|.++++.+
T Consensus 120 ~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLv------------------------------------------------ 151 (333)
T 4dfe_A 120 AFDVQAVCSGFAYAVATADSFIRSGQHRTALV------------------------------------------------ 151 (333)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEE------------------------------------------------
T ss_pred EEEeCcccHHHHHHHHHHHHHHHcCCCCEEEE------------------------------------------------
Confidence 99999999999999999999999999887711
Q ss_pred HHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHH
Q 013344 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRS 290 (445)
Q Consensus 211 a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~ 290 (445)
+..|.. + ..++.+ ....+..++|||+|+||.+.+
T Consensus 152 ------------------------------vg~e~~------------s-~~~~~~---d~~~~~lfGDGA~A~vl~~~~ 185 (333)
T 4dfe_A 152 ------------------------------IGAETF------------S-RILDFK---DRTTCVLFGDGAGAVILQASD 185 (333)
T ss_dssp ------------------------------EEEEEG------------G-GGCCTT---CTTTTTTBCEEEEEEEEEEES
T ss_pred ------------------------------EEeecc------------c-cccCcc---cccceeeeccccEEEEEEEcC
Confidence 000000 0 000000 011234489999999998754
Q ss_pred HHHhcCCCeeEEEEEe-EEe---ecCC-----------CC--C-C--------ccHHHHHHHHHHHcCCCCCCccEEEec
Q 013344 291 VAMRKGLPILGVFRTF-AAV---GVDP-----------AI--M-G--------VGPAVAIPAAVKSAGLQLDDIDLFEIN 344 (445)
Q Consensus 291 ~a~~~g~~~~~~i~~~-~~~---~~~p-----------~~--~-~--------~~~~~ai~~aL~~aGl~~~DID~~e~h 344 (445)
. ..++...... +.. -..| .. | + .....+++++|+++|++++|||+|++|
T Consensus 186 ~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~H 260 (333)
T 4dfe_A 186 E-----PGVLASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSAEQIDWLIPH 260 (333)
T ss_dssp S-----CSEEEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEEC
T ss_pred C-----CCeEEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 1 1222211110 000 0000 00 0 0 112478999999999999999999999
Q ss_pred CCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 345 EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 345 ~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
+++..+...+.+.||++++++..+. +.+|||++++++.+|.++.+++.. +.|+.+++ +|+|++|+.+++++
T Consensus 261 q~~~~i~~~~~~~lgl~~~~~~~~l------~~~GNt~sasi~~~L~~~~~~g~~-~~Gd~vll~~~G~G~t~~~~ll~~ 333 (333)
T 4dfe_A 261 QANIRIMQSTCRKLGLPQERMIVTV------GEHGNTSAASIPLALDVAVRDGRI-KRGQNVLIEGVGGGFTWGASVIRY 333 (333)
T ss_dssp CSCHHHHHHHHHHTTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHHHTTCS-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCHHHHHHHHHHhCCCHHHhhhhH------HhcCchHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEchhheeEEEEEEC
Confidence 9999999999999999999998765 789999999999999999887655 66754443 89999999888875
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-28 Score=240.03 Aligned_cols=261 Identities=19% Similarity=0.185 Sum_probs=194.7
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+.||. .+|++.+|+. +.+++++.+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|++ +++
T Consensus 37 ~~~i~--~~tGi~~R~~-a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~ 111 (323)
T 3il3_A 37 DEWIV--TRSGIRERRI-AAEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHA-YPSAACQVQGLLNID-DAI 111 (323)
T ss_dssp HHHHH--HHTCCCEEEC-CCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHTTCS-SCE
T ss_pred HHHHH--HhcCCcEEEE-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CccHHHHHHHHhCCC-Ccc
Confidence 44565 6899987653 556899999999999999999999999999999999988765 456788888999996 699
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~ 210 (445)
+++++++|+|+++||..|.++|++|.++++.+
T Consensus 112 ~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLv------------------------------------------------ 143 (323)
T 3il3_A 112 SFDLAAACTGFVYALSVADQFIRAGKVKKALV------------------------------------------------ 143 (323)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTTSCSEEEE------------------------------------------------
T ss_pred EEEECCccHHHHHHHHHHHHHHHCCCCCEEEE------------------------------------------------
Confidence 99999999999999999999999999887611
Q ss_pred HHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHH
Q 013344 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRS 290 (445)
Q Consensus 211 a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~ 290 (445)
+..|... ..+++.. ...+..++|||+|+||...+
T Consensus 144 ------------------------------vg~e~~s-------------~~~~~~d---~~~~~lfGDGA~A~vl~~~~ 177 (323)
T 3il3_A 144 ------------------------------IGSDLNS-------------RKLDETD---RSTVVLFGDGAGAVILEASE 177 (323)
T ss_dssp ------------------------------EEEEEGG-------------GSCCTTC---TTTTTTBCEEEEEEEEEEES
T ss_pred ------------------------------EEeeccc-------------cccCccc---cccccccccceEEEEEEEcC
Confidence 0000000 0000000 01233479999999998754
Q ss_pred HHHhcCCCeeEEEEEe-EEe----ecC----C----CCCC-cc----------HHHHHHHHHHHcCCCCCCccEEEecCC
Q 013344 291 VAMRKGLPILGVFRTF-AAV----GVD----P----AIMG-VG----------PAVAIPAAVKSAGLQLDDIDLFEINEA 346 (445)
Q Consensus 291 ~a~~~g~~~~~~i~~~-~~~----~~~----p----~~~~-~~----------~~~ai~~aL~~aGl~~~DID~~e~h~~ 346 (445)
...++...... +.. ..+ | ..+. .+ ...+++++|+++|++++|||+|.+|++
T Consensus 178 -----~~~i~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~ 252 (323)
T 3il3_A 178 -----QEGIISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQA 252 (323)
T ss_dssp -----SCCEEEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCS
T ss_pred -----CCCeEEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC
Confidence 11222211111 000 011 0 0000 01 136788999999999999999999999
Q ss_pred ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 347 FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 347 ~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
+..+...+.+.||++++++..+. +.+|||++++++.+|.++.+++.. +.|+.+++ +|+|++|+.+++++
T Consensus 253 ~~~i~~~~~~~lgl~~ek~~~~l------~~~GNt~sasi~~~L~~~~~~g~~-~~Gd~vll~~~G~G~t~~~~~l~~ 323 (323)
T 3il3_A 253 NLRIITATAKKLEMDMSQVVVTL------DKYANNSAATVPVALDEAIRDGRI-QRGQLLLLEAFGGGWTWGSALVRF 323 (323)
T ss_dssp CHHHHHHHHHHTTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHHHTTSS-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CHHHHHHHHHHcCcCHHHhhccH------hhcCchHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEehhheeEEEEEEC
Confidence 99999999999999999998765 789999999999999999887665 66764443 89999999888875
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-27 Score=241.45 Aligned_cols=248 Identities=18% Similarity=0.232 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-----------c--------------cchHHHHHHHHcCCC
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYAGFP 126 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~-----------~--------------~~~~a~~~~~~lGl~ 126 (445)
.+|+.+|+++||+++|+++++|| .|++|+..++.. . ...++..++..+|+
T Consensus 78 ~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl- 156 (416)
T 1e5m_A 78 CHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA- 156 (416)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCC-
Confidence 38999999999999999999999 799998765410 0 01357778889999
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
+.|+++|+++|+|++.||..|+++|++|++|++.... .. -+++..+..+..
T Consensus 157 -~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~------------------------~~~~~~~~~~~~--- 208 (416)
T 1e5m_A 157 -KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEA------------------------AITPLSYAGFAS--- 208 (416)
T ss_dssp -CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC------------------------CCSHHHHHHHHH---
T ss_pred -CCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecc------------------------cCCHHHHHHHHH---
Confidence 4799999999999999999999999999999981100 00 000000001100
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEE
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvv 285 (445)
.+.+.. ... +++. ..+| |+. ..++..++||++++|
T Consensus 209 --------~~~ls~-------~~~------------~p~~------------~~rp-fd~-----~~~G~v~geGaaavv 243 (416)
T 1e5m_A 209 --------ARALSF-------RND------------DPLH------------ASRP-FDK-----DRDGFVMGEGSGILI 243 (416)
T ss_dssp --------TTCBCC-------CTT------------CGGG------------TCCT-TBT-----TCCSBCBBCEEEEEE
T ss_pred --------cCCccC-------CCC------------CCcc------------cccc-Ccc-----CCCCceeeeeEEEEE
Confidence 011000 000 0111 1334 432 234556899999999
Q ss_pred eeCHHHHHhcCCCeeEEEEEeEEeecC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-----HHHH
Q 013344 286 LMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-----VYCR 355 (445)
Q Consensus 286 L~s~~~a~~~g~~~~~~i~~~~~~~~~-----p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~-----~~~~ 355 (445)
|++.+.|++.+.++++++.+++..... |...+.++..+++++|+++|++++||||+++|++++... ..+.
T Consensus 244 L~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~ 323 (416)
T 1e5m_A 244 LEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIK 323 (416)
T ss_dssp EEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHH
T ss_pred ECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHH
Confidence 999999999999999999998876533 444566778999999999999999999999999998742 2344
Q ss_pred HHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 356 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 356 e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
+.+|....+++.++.+..+||+.|++|+.++++++.+|+++.
T Consensus 324 ~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ 365 (416)
T 1e5m_A 324 QALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDK 365 (416)
T ss_dssp HHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCC
Confidence 556665567777777777999999999999999999999753
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.5e-28 Score=242.18 Aligned_cols=258 Identities=19% Similarity=0.235 Sum_probs=190.5
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~ 129 (445)
.+.||. .||++.+|+. +.++++..+|+++|+++||+++|++|+|||.||++++++++. .+..+..++..||++ ..
T Consensus 40 ~~e~I~--~rtGI~~R~~-a~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~-~P~~a~~v~~~LGl~-~~ 114 (350)
T 4ewp_A 40 SDEWIR--QRTGIVTRQR-ATAEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHA-TPSAAALVAHEIGAT-PA 114 (350)
T ss_dssp CHHHHH--HHHCCSEEEC-CCSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCS-SSCHHHHHHHHTTCT-TS
T ss_pred CHHHHH--hccCceEEEE-cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CCchHHHHHHHhCCC-Cc
Confidence 356676 6899987664 557899999999999999999999999999999999999875 456677788899996 57
Q ss_pred ceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 130 ~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
++|+++.+|+++++||..|..+|++|.++.+ +..+.+.++.+
T Consensus 115 ~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~~d~~~--------------------------------- 161 (350)
T 4ewp_A 115 PAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLSDVVDPTD--------------------------------- 161 (350)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCCTTC---------------------------------
T ss_pred eEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeeceecccccc---------------------------------
Confidence 8999999999999999999999999988776 11111110000
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeE
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAV 284 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAv 284 (445)
...+..++|||+|+
T Consensus 162 ------------------------------------------------------------------~~~~~lfgDGA~A~ 175 (350)
T 4ewp_A 162 ------------------------------------------------------------------RSISFLLGDGAGAV 175 (350)
T ss_dssp ------------------------------------------------------------------TTTGGGBCEEEEEE
T ss_pred ------------------------------------------------------------------cccccccccchhee
Confidence 00112267888888
Q ss_pred EeeCHHHHHhcCCCeeEEEEEeE-----Eeec------------------CC------------CC-C-C--------cc
Q 013344 285 LLMKRSVAMRKGLPILGVFRTFA-----AVGV------------------DP------------AI-M-G--------VG 319 (445)
Q Consensus 285 vL~s~~~a~~~g~~~~~~i~~~~-----~~~~------------------~p------------~~-~-~--------~~ 319 (445)
||...+. .+. .....+.. .... +. .. | + ..
T Consensus 176 vl~~~~~---~~~--~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~ 250 (350)
T 4ewp_A 176 IVAASDE---PGI--SPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWS 250 (350)
T ss_dssp EEEEESS---CCB--CCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHT
T ss_pred eeecccC---CCc--cceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHh
Confidence 8865431 111 10011000 0000 00 00 0 0 01
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCC-CCChhcccChhhhHHHHHHHHHHHHHHhcCC
Q 013344 320 PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINV-NGGALAIGHPLGTTGARCVATLLHEMKRRGR 398 (445)
Q Consensus 320 ~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~-~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~ 398 (445)
...+++++|+++|++++|||+|.+||++..+...+.+.||++++++.+ +. +.+|||++++++.+|+++.+++.
T Consensus 251 ~~~~i~~~L~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~~~~~~~~l------~~~GNtssasi~~~L~~~~~~g~ 324 (350)
T 4ewp_A 251 MAKVAREALDAAGVEPEDLAAFIPHQANMRIIDEFAKQLKLPESVVVARDI------ADAGNTSAASIPLAMHRLLEENP 324 (350)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEECCSCHHHHHHHHHHTTCCTTSEECCTH------HHHCBCGGGHHHHHHHHHHHHCG
T ss_pred hhHHHHHHHHhhcCChhHhceEEecCCCHHHHHHHHHHcCcChHhEEeccc------ccccchHHHHHHHHHHHHHHhCC
Confidence 236889999999999999999999999999999999999999998754 44 78999999999999999988765
Q ss_pred CCceeeEEE-e-ecccceeEEEEEEcc
Q 013344 399 DCRFGVISM-C-IGTGMGAAAVFERGD 423 (445)
Q Consensus 399 ~~~~G~~~~-~-~G~G~~~a~~l~~~~ 423 (445)
. +.|..++ + +|+|++|+++++|+.
T Consensus 325 ~-~~Gd~vll~~fG~G~t~~~~vlr~P 350 (350)
T 4ewp_A 325 E-LSGGLALQIGFGAGLVYGAQVVRLP 350 (350)
T ss_dssp G-GTTSEEEEEEEETTTEEEEEEEECC
T ss_pred C-CCcCEEEEEEEchhhEeEEEEEEeC
Confidence 5 6665433 3 899999999998863
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=241.16 Aligned_cols=264 Identities=17% Similarity=0.152 Sum_probs=193.9
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+.+|. .+|++.+|+. ..+++++.+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|++.+++
T Consensus 59 ~~~i~--~~tGI~~R~~-a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~ 134 (365)
T 3gwa_A 59 AEKIL--AKTGIRERRI-AAPRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYV-LPTSACMLQHRLGIPTHAG 134 (365)
T ss_dssp HHHHH--HHHCCCEEEE-CCTTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCS-BSCHHHHHHHHTTCCTTSE
T ss_pred HHHHH--HhcCccEEEE-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCCCCce
Confidence 34444 5788886654 456789999999999999999999999999999999988775 5567788888999986799
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~ 210 (445)
+++++.+|+|+++||..|+++|++|.++++.+
T Consensus 135 ~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLv------------------------------------------------ 166 (365)
T 3gwa_A 135 ALDVNLGCSGYVYGLSLAKGLVETGAARCVLL------------------------------------------------ 166 (365)
T ss_dssp EEEEECSTTHHHHHHHHHHHHHHTTSCSEEEE------------------------------------------------
T ss_pred EEEecccChHHHHHHHHHHHHHHcCCCCEEEE------------------------------------------------
Confidence 99999999999999999999999999887711
Q ss_pred HHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHH
Q 013344 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRS 290 (445)
Q Consensus 211 a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~ 290 (445)
+..|... + .++++. ...+..++|||+|+||.+.+
T Consensus 167 ------------------------------vg~e~~s------------~-~~~~~d---r~~~~lfGDGAaA~vl~~~~ 200 (365)
T 3gwa_A 167 ------------------------------LTADTYS------------K-YLHPLD---KSVRTLFGDGASATAVIAEH 200 (365)
T ss_dssp ------------------------------EEEECGG------------G-GSCTTC---HHHHTTBCCEEEEEEEEEEC
T ss_pred ------------------------------EEEchhh------------c-cCCccc---ccccccccceeEEEEEEecC
Confidence 0000000 0 000000 00122378999999998654
Q ss_pred HHHhcCCCeeEEEEEeE-E----eec------CCC-------------------CC---C--------ccHHHHHHHHHH
Q 013344 291 VAMRKGLPILGVFRTFA-A----VGV------DPA-------------------IM---G--------VGPAVAIPAAVK 329 (445)
Q Consensus 291 ~a~~~g~~~~~~i~~~~-~----~~~------~p~-------------------~~---~--------~~~~~ai~~aL~ 329 (445)
... ..++....... . ... .|. .+ + .....+++++|+
T Consensus 201 ~~~---~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~ 277 (365)
T 3gwa_A 201 GEL---ERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLA 277 (365)
T ss_dssp SSS---CSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC---CceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHHHHHH
Confidence 210 01111111110 0 000 010 00 0 001367899999
Q ss_pred HcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe-
Q 013344 330 SAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC- 408 (445)
Q Consensus 330 ~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~- 408 (445)
++|++++|||+|.+|+++..+...+.++||++++++..+. +.+|||++++++.+|.++.+++.. +.|+.+++
T Consensus 278 ~~gl~~~did~~v~Hq~n~~i~~~~~~~Lgl~~ek~~~~l------~~~GNtssAsipl~L~~~~~~g~~-~~Gd~vll~ 350 (365)
T 3gwa_A 278 LAGEPRENIDCFVLHQANRFMLDALRKKMKIPEHKFPVLM------EHCGNTVSSTLPLALETMRANGTL-ARGMRLMLL 350 (365)
T ss_dssp HHTCCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGSCCCC------TTTCBCGGGHHHHHHHHHHHTTCC-CTTCEEEEE
T ss_pred HcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHHH------hcccchHHHHHHHHHHHHHHcCCC-CCCCEEEEE
Confidence 9999999999999999999999999999999999998776 889999999999999999887765 66764443
Q ss_pred -ecccceeEEEEEEc
Q 013344 409 -IGTGMGAAAVFERG 422 (445)
Q Consensus 409 -~G~G~~~a~~l~~~ 422 (445)
+|+|++|+.+++++
T Consensus 351 ~fG~G~t~~~~ll~~ 365 (365)
T 3gwa_A 351 GFGVGYSWAGCLVNF 365 (365)
T ss_dssp EEETTTEEEEEEEEC
T ss_pred EEehhheeEEEEEEC
Confidence 89999999888875
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=236.90 Aligned_cols=250 Identities=19% Similarity=0.257 Sum_probs=185.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCC-CC----cEEEEeccCC--------------------------CcccchHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSE-VG----DIVVGTVLAP--------------------------GSQRASECRMAAFY 122 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~d-Id----~vi~g~~~~~--------------------------~~~~~~~a~~~~~~ 122 (445)
+..+|+.+|+++||++||+++++ || .+++|+.... .. ....+..++..
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~is~~ 164 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRL-INLASGHVSIK 164 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTC-TTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccch-hhhHHHHHHHH
Confidence 35789999999999999999998 88 5888875321 11 22456677889
Q ss_pred cCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHH
Q 013344 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202 (445)
Q Consensus 123 lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~ 202 (445)
+|+ +.|+++|+++|+|++.||..|+++|++|++|++..... + .-+++..+..+..
T Consensus 165 lgl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~--------e---------------~~~~~~~~~~~~~ 219 (428)
T 3kzu_A 165 HKL--RGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGT--------E---------------SPVSRISLAGFAA 219 (428)
T ss_dssp HTC--CSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEE--------E---------------CCCSHHHHHHHHH
T ss_pred cCC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeee--------c---------------CcCCHHHHHHHHH
Confidence 999 46999999999999999999999999999999811000 0 0011111122211
Q ss_pred HHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCe
Q 013344 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAG 282 (445)
Q Consensus 203 ~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAa 282 (445)
.+. ++.+. .+-+ -...+| |+. ..++..++|||+
T Consensus 220 -----------~~~------------------------ls~~~-----~~~~-~~~~~p-fd~-----~~~G~v~gdGAa 252 (428)
T 3kzu_A 220 -----------CKA------------------------LSTER-----NDDP-TAASRP-YDE-----DRDGFVMGEGAG 252 (428)
T ss_dssp -----------TTC------------------------BCCSC-----TTSG-GGTCCT-TBT-----TCCSBCBBCEEE
T ss_pred -----------ccc------------------------cccCc-----cCCc-ccccCC-ccc-----CCCceeecCceE
Confidence 000 11110 0000 011334 322 234556899999
Q ss_pred eEEeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCh----HHHHH
Q 013344 283 AVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFA----SQFVY 353 (445)
Q Consensus 283 AvvL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~----~~~~~ 353 (445)
++||++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+|+|++++ .....
T Consensus 253 avvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~d~~e~~a 332 (428)
T 3kzu_A 253 IVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTSTMADTIELGA 332 (428)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSSTTHHHHHHH
T ss_pred EEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEEecCCcchhhHHHHHH
Confidence 9999999999999999999999888765 34566677888999999999999999999999996665 33445
Q ss_pred HHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 354 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 354 ~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+.+.+|.+.+++|+++++..+||++|++|+.++++++.+|+++
T Consensus 333 l~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~ 375 (428)
T 3kzu_A 333 VERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDN 375 (428)
T ss_dssp HHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccC
Confidence 5666788888999999999999999999999999999999875
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=240.34 Aligned_cols=263 Identities=14% Similarity=0.064 Sum_probs=193.6
Q ss_pred EEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceE
Q 013344 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR 132 (445)
Q Consensus 53 ~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~ 132 (445)
+|. .+|++.+|+. ..+++++.+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|++.+++++
T Consensus 47 ~i~--~~tGI~~R~~-a~~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~ 122 (354)
T 4efi_A 47 DVV--KMIGVNRRRW-ADAQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYR-LPATAFVLQAELDLPASCLAL 122 (354)
T ss_dssp HHH--HHHCCSEEEC-CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCCTTSEEE
T ss_pred HHH--HhcCCeEEEE-cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCcCCCccEE
Confidence 454 5788887654 456889999999999999999999999999999999988765 567788899999997679999
Q ss_pred EecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Q 013344 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 212 (445)
Q Consensus 133 ~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~ 212 (445)
+++.+|+|++.||..|.++|++|.++++.+
T Consensus 123 ~v~~aC~s~~~al~~A~~~i~~g~~~~vLv-------------------------------------------------- 152 (354)
T 4efi_A 123 DINLGCSGYPQALWLGMNLIQTGAAKRVLL-------------------------------------------------- 152 (354)
T ss_dssp EECCCTTHHHHHHHHHHHHHHTTSCSEEEE--------------------------------------------------
T ss_pred eeCcccHHHHHHHHHHHHHHHCCCCCEEEE--------------------------------------------------
Confidence 999999999999999999999999887711
Q ss_pred HcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHH
Q 013344 213 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVA 292 (445)
Q Consensus 213 ~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a 292 (445)
+..|.. ...++++. ...+..++|||+|+||.+.+..
T Consensus 153 ----------------------------vg~e~~-------------s~~~~~~d---~~~~~lfGDGA~A~vl~~~~~~ 188 (354)
T 4efi_A 153 ----------------------------AVGDTI-------------SKMIDPTD---RSTSLLFGDAGTMTALETSNGD 188 (354)
T ss_dssp ----------------------------EEEECG-------------GGGCCTTC---HHHHTTBCCEEEEEEEEECCSC
T ss_pred ----------------------------EEechh-------------cccCCccc---cccccccccceeEEEEeecCCC
Confidence 000000 00000000 0012337899999999865321
Q ss_pred HhcCCCeeEEEE-EeEE----eecC-----CC--------------CC---Cc--------cHHHHHHHHHHHcCCCCCC
Q 013344 293 MRKGLPILGVFR-TFAA----VGVD-----PA--------------IM---GV--------GPAVAIPAAVKSAGLQLDD 337 (445)
Q Consensus 293 ~~~g~~~~~~i~-~~~~----~~~~-----p~--------------~~---~~--------~~~~ai~~aL~~aGl~~~D 337 (445)
..+.... ..+. ...+ |. .+ +. ....+++++|+++|++++|
T Consensus 189 -----~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~d 263 (354)
T 4efi_A 189 -----AAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDKDS 263 (354)
T ss_dssp -----CEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred -----CceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 1111111 1100 0000 10 00 00 1136788999999999999
Q ss_pred ccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--eccccee
Q 013344 338 IDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGA 415 (445)
Q Consensus 338 ID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~ 415 (445)
||+|.+||++..+...+.+.||++++++..+. +.+||||+++++.+|.++.+++.. +.|+.+++ +|+|++|
T Consensus 264 id~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~~l------~~~GNt~sasi~~~L~~~~~~g~~-~~Gd~vll~~fG~G~t~ 336 (354)
T 4efi_A 264 YDAFLFHQANLFMLKHLAKKAGLPAERVPVNI------GEYGNTSCASIPLLITTELKDRLK-EETLQLGMFGFGVGYSW 336 (354)
T ss_dssp CSEEEECCCCHHHHHHHHHHTTCCGGGSCCCH------HHHCBCGGGHHHHHHHHHSHHHHH-HSCEEEEEEEEETTTEE
T ss_pred CCEEEeCCCCHHHHHHHHHHhCcCHHHHHHHH------hhhCcHHHHHHHHHHHHHHHhCCC-CCCCEEEEEEEchhhhh
Confidence 99999999999999999999999999998765 889999999999999998766543 55654333 8999999
Q ss_pred EEEEEEcccc
Q 013344 416 AAVFERGDCA 425 (445)
Q Consensus 416 a~~l~~~~~~ 425 (445)
+.+++++...
T Consensus 337 ~~~ll~~~~~ 346 (354)
T 4efi_A 337 ASAALAVGPL 346 (354)
T ss_dssp EEEEEEECCC
T ss_pred eeeEEEECCc
Confidence 9999988654
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-27 Score=234.33 Aligned_cols=271 Identities=15% Similarity=0.165 Sum_probs=195.9
Q ss_pred EEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCce
Q 013344 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (445)
Q Consensus 52 v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~ 131 (445)
-+|. .+|++.+|+. ..+++++.+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|++.++++
T Consensus 48 ~~i~--~~tGi~~R~~-~~~~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~ 123 (345)
T 3s21_A 48 DVLG--DVAGIHARRL-WDQDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYL-EPSTASIVSGNLGVSDHCMT 123 (345)
T ss_dssp CHHH--HTTCCSEEEE-CSSCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCS-SSCHHHHHHHHHTCCTTCEE
T ss_pred HHHH--HhhCceeEEE-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CChHHHHHHHHhCCCCCceE
Confidence 4554 5888887654 446789999999999999999999999999999999988775 45678888889999767999
Q ss_pred EEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHH
Q 013344 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHR 206 (445)
Q Consensus 132 ~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~ 206 (445)
++++++|+|++.||..|+++|++|.++++ +..+...++.. +.
T Consensus 124 ~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~~~--------------------------~~------- 170 (345)
T 3s21_A 124 FDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEKTL--------------------------ER------- 170 (345)
T ss_dssp EECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHHHHH--------------------------HH-------
T ss_pred EeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhcccc--------------------------cc-------
Confidence 99999999999999999999999999988 22111111000 00
Q ss_pred HHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEe
Q 013344 207 KAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLL 286 (445)
Q Consensus 207 ~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL 286 (445)
+ ..|+ .+.+. |+. ..+...++|||+|+||
T Consensus 171 ---------~-------------------------~~~~-----~~~~~-------f~~-----~~~~~~~GdGA~A~vl 199 (345)
T 3s21_A 171 ---------M-------------------------TSPD-----VTEEE-------FRN-----ELAALTLGCGAAAMVM 199 (345)
T ss_dssp ---------H-------------------------TCTT-----CCHHH-------HHH-----HHGGGGBCCEEEEEEE
T ss_pred ---------c-------------------------cCCc-----cchhh-------hhh-----hccceeeccceeEEEE
Confidence 0 0000 00000 000 0112237999999999
Q ss_pred eCHHHHHhcCCCeeEEEEEeEEeecC-------C--C--CC-Cc--------cHHHHHHHHHHHcCCCCCCccEEEecCC
Q 013344 287 MKRSVAMRKGLPILGVFRTFAAVGVD-------P--A--IM-GV--------GPAVAIPAAVKSAGLQLDDIDLFEINEA 346 (445)
Q Consensus 287 ~s~~~a~~~g~~~~~~i~~~~~~~~~-------p--~--~~-~~--------~~~~ai~~aL~~aGl~~~DID~~e~h~~ 346 (445)
.+.+... .+. ++.+......+ + . .| +. ....+++++|+++|++++|||+|.+|++
T Consensus 200 ~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~ 274 (345)
T 3s21_A 200 ARSELVP-DAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQV 274 (345)
T ss_dssp EEGGGST-TSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCS
T ss_pred ecCCCCC-CCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC
Confidence 8765311 011 23322221100 0 0 01 11 1136788999999999999999999999
Q ss_pred ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 347 FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 347 ~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
+..+...+.++||++++++..+. +.+|||++++++.+|.++.+++.. +.|..+++ +|+|+++++++++|
T Consensus 275 ~~~i~~~~~~~lgl~~ek~~~~l------~~~GNt~sasi~~~L~~~~~~g~~-~~Gd~vll~~~G~G~t~~~~~l~w 345 (345)
T 3s21_A 275 SRPHTAAFVKSFGIDPAKVMTIF------GEHGNIGPASVPIVLSKLKELGRL-KKGDRIALLGIGSGLNCSMAEVVW 345 (345)
T ss_dssp CHHHHHHHHHHHTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHHHHTCC-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CHHHHHHHHHHcCcCHHHceeeH------hhcCchHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEChhhhheEEEEEC
Confidence 99999999999999999987665 789999999999999999887655 66664443 89999999988875
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=237.85 Aligned_cols=248 Identities=17% Similarity=0.218 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-------------------------ccchHHHHHHHHcCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAGF 125 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~lGl 125 (445)
...|+.+|+++||+++|+++++|| .+++|+...... .....+..++..+|+
T Consensus 88 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 167 (427)
T 3ho9_A 88 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 167 (427)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC
Confidence 467999999999999999999999 588887643210 011345667789999
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
+.|+++|+++|+|++.||..|+++|++|++|++.... ... . +...+..+..
T Consensus 168 --~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~---------~---------------~p~~~~~~~~-- 219 (427)
T 3ho9_A 168 --RGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKA---------S---------------TPLGVGGFGA-- 219 (427)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC---------C---------------SHHHHHHHHH--
T ss_pred --CCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeeccc---------C---------------CHHHHHHHHh--
Confidence 4799999999999999999999999999999981100 000 0 0000011100
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeE
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAV 284 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAv 284 (445)
.+. +..+. .+.+. ..+| |+. ..+...++|||+++
T Consensus 220 ---------~~~------------------------ls~~~-----~~~~~--~~~p-fd~-----~~~G~v~geGAaav 253 (427)
T 3ho9_A 220 ---------ARA------------------------LSTRN-----DNPQA--ASRP-WDK-----ERDGFVLGDGAGML 253 (427)
T ss_dssp ---------TTC------------------------BCCCT-----TCHHH--HCCT-TBT-----TCCSBCBBCEEEEE
T ss_pred ---------ccC------------------------cccCC-----CCCCc--ccCC-ccC-----CCCCceeeeeEEEE
Confidence 000 00000 00011 1344 322 22444589999999
Q ss_pred EeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChH-----HHHHH
Q 013344 285 LLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS-----QFVYC 354 (445)
Q Consensus 285 vL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~-----~~~~~ 354 (445)
||++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+|+|.+++. ....+
T Consensus 254 vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~ 333 (427)
T 3ho9_A 254 VLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAV 333 (427)
T ss_dssp EEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHH
T ss_pred EEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHH
Confidence 99999999999999999999988765 345556777889999999999999999999999966554 45667
Q ss_pred HHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 355 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 355 ~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.+|...+++|+++++..+||+.|++|++++++++.+|+++
T Consensus 334 ~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~ 375 (427)
T 3ho9_A 334 KTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQ 375 (427)
T ss_dssp HHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcC
Confidence 778898888999999999999999999999999999999875
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.9e-27 Score=234.10 Aligned_cols=259 Identities=20% Similarity=0.177 Sum_probs=192.8
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+.+|. .+|++.+|+. ..+++++.+|+.+|+++||+++|++|++||.|++++++++.. .+..+..++..+|++ +++
T Consensus 53 ~~~i~--~~tGi~~R~~-a~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~ 127 (359)
T 3h78_A 53 DEFIV--ERTGVRTRYH-VEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHH-DPSQACLIQPLLGLR-HIP 127 (359)
T ss_dssp HHHHH--HHHCCCEEEE-CCTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHHTCC-SCC
T ss_pred HHHHH--HhcCceEEEE-cCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCC-CCc
Confidence 34554 5788887653 556789999999999999999999999999999999988765 456788899999997 699
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeEe-----cCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGS-----VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~-----~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
+++++.+|+|++.||..|+++|++|.++++. ..+...++.
T Consensus 128 ~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~~~~----------------------------------- 172 (359)
T 3h78_A 128 VLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMDCS----------------------------------- 172 (359)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGCCCS-----------------------------------
T ss_pred EEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccCCcc-----------------------------------
Confidence 9999999999999999999999999988771 111110000
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEE
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvv 285 (445)
|+ ....+..++|||+|+|
T Consensus 173 --------------------------------------d~------------------------~~~t~~lfGDGAaA~v 190 (359)
T 3h78_A 173 --------------------------------------DR------------------------GRNLSILLGDGAGAVV 190 (359)
T ss_dssp --------------------------------------TT------------------------THHHHTTBCEEEEEEE
T ss_pred --------------------------------------cc------------------------cccccceecceeEEEE
Confidence 00 0001233799999999
Q ss_pred eeCHHHHHhcCCCeeEEEEEeE-E----eecC-------C--------C---CCC-cc----------HHHHHHHHHHHc
Q 013344 286 LMKRSVAMRKGLPILGVFRTFA-A----VGVD-------P--------A---IMG-VG----------PAVAIPAAVKSA 331 (445)
Q Consensus 286 L~s~~~a~~~g~~~~~~i~~~~-~----~~~~-------p--------~---~~~-~~----------~~~ai~~aL~~a 331 (445)
|...+. .+..++....... . ...+ | . .+. .+ ...+++++|+++
T Consensus 191 l~~~~~---~~~~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~ 267 (359)
T 3h78_A 191 VSAGES---LEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAH 267 (359)
T ss_dssp EECCSC---SSSEEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecCC---CCCceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHc
Confidence 987531 0111221111110 0 0011 0 0 000 01 136889999999
Q ss_pred CCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--e
Q 013344 332 GLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--I 409 (445)
Q Consensus 332 Gl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~ 409 (445)
|++++|||+|.+|+++..+...+.++||++++++..+. ..+|||++++++.+|+++.++ . +.|..+++ +
T Consensus 268 gl~~~did~~v~Hq~n~~i~~~~~~~lgl~~ek~~~~l------~~~GNt~sAsi~l~L~~~~~~-l--~~Gd~vll~~f 338 (359)
T 3h78_A 268 ELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKFAVTV------DRLGNMASASTPVTLAMFWPD-I--QPGQRVLVLTY 338 (359)
T ss_dssp TCCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHGGG-S--CTTCEEEEEEE
T ss_pred CCCHHHCCEEEECCCCHHHHHHHHHHhCcCHHHhhhhh------hcccchHHHHHHHHHHHHHHh-C--CCCCEEEEEEE
Confidence 99999999999999999999999999999999998765 789999999999999999877 3 66654433 8
Q ss_pred cccceeEEEEEEcc
Q 013344 410 GTGMGAAAVFERGD 423 (445)
Q Consensus 410 G~G~~~a~~l~~~~ 423 (445)
|+|++|+.+++++.
T Consensus 339 G~G~t~~~~ll~~~ 352 (359)
T 3h78_A 339 GSGATWGAALYRKP 352 (359)
T ss_dssp ETTTEEEEEEEECC
T ss_pred chhhhheeeeEEeh
Confidence 99999999999873
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=230.48 Aligned_cols=249 Identities=17% Similarity=0.218 Sum_probs=181.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCC-----------------c--------ccchHHHHHHHHcC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPG-----------------S--------QRASECRMAAFYAG 124 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~-----------------~--------~~~~~a~~~~~~lG 124 (445)
...+|+.+|+++||+++|+++++|| .|++|+..+.. . ....++..++..+|
T Consensus 73 ~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 152 (413)
T 3o04_A 73 RFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFG 152 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhC
Confidence 3567999999999999999999999 89999864211 0 00123667888999
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
+ +.|+++|+++|+|+++||..|+++|++|++|++..... + .-++......+..
T Consensus 153 l--~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~--------e---------------~~~~~~~~~~~~~-- 205 (413)
T 3o04_A 153 A--KGINSTTVTACATATNSIGDAFKVIERGDADAMITGGA--------E---------------APITKMSLAGFTA-- 205 (413)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEE--------E---------------CCCSHHHHHHHHH--
T ss_pred C--CCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEE--------c---------------ccCCHHHHHHHHh--
Confidence 9 46999999999999999999999999999999811000 0 0000000011100
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeE
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAV 284 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAv 284 (445)
.+.+.. ...++.. .+| |+. ..++..++|||+++
T Consensus 206 ---------~~~ls~--------------------~~~p~~~------------~~p-fd~-----~~~g~~~gdGAaav 238 (413)
T 3o04_A 206 ---------NKALSL--------------------NPDPETA------------CRP-FDK-----DRDGFIIGEGAGIV 238 (413)
T ss_dssp ---------TTCBCC--------------------CCCTTTS------------CCT-TBT-----TCCSBCBBCEEEEE
T ss_pred ---------cccccC--------------------CCCCCCC------------cCC-CcC-----CCCCceEeccEEEE
Confidence 000000 0001111 233 322 23445589999999
Q ss_pred EeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----H-HH
Q 013344 285 LLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----V-YC 354 (445)
Q Consensus 285 vL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~-~~ 354 (445)
||++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+++|.+++... . .+
T Consensus 239 vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~~e~~al 318 (413)
T 3o04_A 239 ILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAI 318 (413)
T ss_dssp EEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHH
T ss_pred EEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHH
Confidence 99999999999999999999888764 23445566678999999999999999999999999998742 2 23
Q ss_pred HHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 355 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 355 ~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.++...+++++++++..+||+.|++|++++++++.+|+++
T Consensus 319 ~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~ 360 (413)
T 3o04_A 319 KTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDN 360 (413)
T ss_dssp HHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhC
Confidence 334566667899999999999999999999999999999875
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-26 Score=227.20 Aligned_cols=257 Identities=20% Similarity=0.168 Sum_probs=181.3
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+ ...++++..+|+.+|+++||+++|+++++||.|++|++++++. .+..+..++..+|++ .+|+++++++
T Consensus 35 ~~~gi~~r~-~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~a 111 (313)
T 1zow_A 35 KMTGIKERH-WADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMP-FPTVANMLQERLGTG-KVASMDQLAA 111 (313)
T ss_dssp HHHCCSEEE-CCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHHTCC-SCCEEEEECG
T ss_pred HhhCceEEE-ecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEEEECCc
Confidence 588998754 4667899999999999999999999999999999999887764 445688888899996 4899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|+++|++|.++++...
T Consensus 112 Cas~~~al~~A~~~i~~g~~~~vLv~------------------------------------------------------ 137 (313)
T 1zow_A 112 CSGFMYSMITAKQYVQSGDYHNILVV------------------------------------------------------ 137 (313)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSCEEEE------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEE------------------------------------------------------
Confidence 99999999999999999998876110
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
..|...+ . .+| ++ ..++..++|||+|+||.+.+. +.
T Consensus 138 ------------------------g~e~~s~-~--------~~~-~d------~~~~~~~gdGa~A~vl~~~~~----~~ 173 (313)
T 1zow_A 138 ------------------------GADKLSK-I--------TDL-TD------RSTAVLFGDGAGAVIIGEVSE----GR 173 (313)
T ss_dssp ------------------------EEEEGGG-T--------CCT-TC------HHHHTTBCEEEEEEEEEECST----TC
T ss_pred ------------------------EEccccc-c--------cCc-cc------ccceeeeccceEEEEEEecCC----CC
Confidence 0000000 0 000 00 012234799999999987643 12
Q ss_pred CeeEEE-EEeEEee---cCCC-----CC-C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcC
Q 013344 298 PILGVF-RTFAAVG---VDPA-----IM-G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG 359 (445)
Q Consensus 298 ~~~~~i-~~~~~~~---~~p~-----~~-~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LG 359 (445)
++++.. .+.+... ..|. .+ + .....+++++|+++|++++|||+|++|+++..+...+.+.||
T Consensus 174 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~~~~~lg 253 (313)
T 1zow_A 174 GIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIMESARERLG 253 (313)
T ss_dssp EEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHHT
T ss_pred ceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhC
Confidence 233321 1211100 0011 01 1 134579999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 360 LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 360 l~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
++++++..+ +-.+||+.++++. ..|.++.+++.. +.|..+++ +|+|++++.+++++
T Consensus 254 ~~~~~~~~~--~~~~Gh~~~as~~----~~L~~~~~~~~~-~~g~~vl~~~~G~G~t~~~~~l~~ 311 (313)
T 1zow_A 254 ISKDKMSVS--VNKYGNTSAASIP----LSIDQELKNGKL-KDDDTIVLVGFGGGLTWGAMTIKW 311 (313)
T ss_dssp CCGGGBCCC--HHHHCBCGGGHHH----HHHHHHHHTTCC-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CCHHHHHHh--HhhhCchHHHHHH----HHHHHHHHcCCC-CCCCEEEEEEEchhhhheEEEEEe
Confidence 999887654 3345666666554 445555444433 44543333 88999999888886
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.5e-26 Score=225.81 Aligned_cols=255 Identities=21% Similarity=0.215 Sum_probs=186.1
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..++.+..+|+.+|+++||+++|++|++||.|++|++++++. .+.++..++..+|++. +|+++++++
T Consensus 35 ~~~Gi~~r~~-~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~-~~~~a~~v~~~lgl~~-~~~~~v~~a 111 (317)
T 1hnj_A 35 TRTGIRERHI-AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHA-FPSAACQIQSMLGIKG-CPAFDVAAA 111 (317)
T ss_dssp HHHCCCEEEE-CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHHTCCS-SCEEEECCG
T ss_pred HHhCceEEEe-cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCCC-CeEEeeCcc
Confidence 4677766543 346788999999999999999999999999999999988764 4567888999999963 899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecC-ccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVN-PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 216 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~-~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~ 216 (445)
|+|++.||..|+++|++|.++++... .... ..
T Consensus 112 Cas~~~al~~A~~~i~~g~~~~vlv~g~e~~---------------------------------s~-------------- 144 (317)
T 1hnj_A 112 CAGFTYALSVADQYVKSGAVKYALVVGSDVL---------------------------------AR-------------- 144 (317)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSEEEEEEEECH---------------------------------HH--------------
T ss_pred cHHHHHHHHHHHHHHHCCCCCEEEEEEechh---------------------------------cc--------------
Confidence 99999999999999999999887110 0000 00
Q ss_pred cccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcC
Q 013344 217 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 296 (445)
Q Consensus 217 ~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g 296 (445)
. .+| +. ..+...++|||+|+||.+.+.
T Consensus 145 -----------------------~------------------~~~----~d---~~~~~~~GdGA~A~vL~~~~~----- 171 (317)
T 1hnj_A 145 -----------------------T------------------CDP----TD---RGTIIIFGDGAGAAVLAASEE----- 171 (317)
T ss_dssp -----------------------H------------------SCT----TC---HHHHTTBCCEEEEEEEEEESS-----
T ss_pred -----------------------c------------------CCc----hh---cccceeeccccEEEEEEecCC-----
Confidence 0 000 00 001123799999999987642
Q ss_pred CCeeEEEEE-eEEe---ecCCC-------------CCCc--------cHHHHHHHHHHHcCCCCCCccEEEecCCChHHH
Q 013344 297 LPILGVFRT-FAAV---GVDPA-------------IMGV--------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF 351 (445)
Q Consensus 297 ~~~~~~i~~-~~~~---~~~p~-------------~~~~--------~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~ 351 (445)
..+++.+.+ .+.. -..|. ..+. ....+++++|+++|++++|||+|++|+++..+.
T Consensus 172 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~ 251 (317)
T 1hnj_A 172 PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRII 251 (317)
T ss_dssp CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHHH
T ss_pred CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH
Confidence 235554443 1110 00111 0111 345799999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 352 VYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 352 ~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
..+.+.||++++++..+. ..+||+++++++..|.++.+++.. +.|..+++ +|+|++++.+++++
T Consensus 252 d~i~~~lg~~~~~~~~~~------~~~Gn~~~As~~~~L~~~~~~~~~-~~G~~vll~~~G~G~t~~~~~l~~ 317 (317)
T 1hnj_A 252 SATAKKLGMSMDNVVVTL------DRHGNTSAASVPCALDEAVRDGRI-KPGQLVLLEAFGGGFTWGSALVRF 317 (317)
T ss_dssp HHHHHHTTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHHHTTCS-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHcCCCHHHhHhhH------hhhCcHHHHHHHHHHHHHHHhCCC-CCCCEEEEEEEchhheeEEEEEEC
Confidence 999999999998876443 456777777788888888776654 55654443 89999998888764
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.1e-26 Score=230.68 Aligned_cols=250 Identities=20% Similarity=0.286 Sum_probs=184.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeccCCCcc-------------------------cchHHHHHHHHcC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ-------------------------RASECRMAAFYAG 124 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~----vi~g~~~~~~~~-------------------------~~~~a~~~~~~lG 124 (445)
+..+|+.+|+++||+++|+++++||. +++|+..+++.. ...++..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence 45789999999999999999999995 777876554210 0135677778899
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
+. .|+++|+++|+|++.||..|+++|++|++|++..... + ..++...+..+..
T Consensus 150 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~--------e---------------~~~~~~~~~~~~~-- 202 (408)
T 1j3n_A 150 FT--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGT--------E---------------AAITPMAIGAFAV-- 202 (408)
T ss_dssp CC--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEE--------E---------------CCCSHHHHHHHHH--
T ss_pred CC--CceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeee--------c---------------ccCCHHHHHHHHh--
Confidence 94 6999999999999999999999999999999811000 0 0000000011100
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeE
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAV 284 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAv 284 (445)
.+.+ +.. +.+.+. ..+| |+. ..++..++||++++
T Consensus 203 ---------~~~l------------------------s~~-----~~~p~~--~~~p-fd~-----~~dg~v~geGaaav 236 (408)
T 1j3n_A 203 ---------MRAL------------------------STR-----NEEPEK--ASRP-FTL-----SRDGFVMGEGAGVL 236 (408)
T ss_dssp ---------TTCB------------------------CCC-----TTCHHH--HCCT-TBT-----TCCCBCBBCEEEEE
T ss_pred ---------cccc------------------------cCC-----CCCCCc--Cccc-CcC-----CCCceEEeeeEEEE
Confidence 0010 000 001111 1334 322 23455589999999
Q ss_pred EeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH-----HHHH
Q 013344 285 LLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ-----FVYC 354 (445)
Q Consensus 285 vL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~-----~~~~ 354 (445)
||++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+++|++++.. ...+
T Consensus 237 vL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al 316 (408)
T 1j3n_A 237 VLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAI 316 (408)
T ss_dssp EEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHH
T ss_pred EEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHH
Confidence 99999999999999999999888764 3345566677899999999999999999999999999985 4556
Q ss_pred HHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 355 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 355 ~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.||.+.+++++++++..+||+.|++|+.+++.++.+|+++
T Consensus 317 ~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~ 358 (408)
T 1j3n_A 317 KRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHG 358 (408)
T ss_dssp HHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcC
Confidence 777888778899999999999999999999999999999874
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=228.69 Aligned_cols=256 Identities=18% Similarity=0.198 Sum_probs=184.9
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+ ...++++..+|+.+|+++||+++|+++++||.|++++.++++. .+.++..++..+|++ ++|+++++++
T Consensus 45 ~~~gi~~r~-~~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~a 121 (335)
T 1u6e_A 45 TRTGIKTRR-FAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQ-TPPAAPMVAASLGAK-GILGFDLSAG 121 (335)
T ss_dssp HHHCCSEEE-ECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCS-SSCHHHHHHHHHTCT-TSEEEEEECG
T ss_pred HhcCCceEe-ecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEeeeccc
Confidence 477887654 2556789999999999999999999999999999999888765 456788888899996 5899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|+++|++|.++++..
T Consensus 122 C~s~~~al~~A~~~i~~g~~~~vLv------------------------------------------------------- 146 (335)
T 1u6e_A 122 AAGFGYALGAAADMIRGGGAATMLV------------------------------------------------------- 146 (335)
T ss_dssp GGHHHHHHHHHHHHHHHTSCSSEEE-------------------------------------------------------
T ss_pred cHHHHHHHHHHHHHHHcCCCCEEEE-------------------------------------------------------
Confidence 9999999999999999999877611
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
+..|... +.+++ ....++..++|||+|+||.+.+. .+
T Consensus 147 -----------------------~g~e~~s-------------~~~~~---~d~~~~~~~gDGA~A~vl~~~~~---~~- 183 (335)
T 1u6e_A 147 -----------------------VGTEKLS-------------PTIDM---YDRGNCFIFADGAAAVVVGETPF---QG- 183 (335)
T ss_dssp -----------------------EEEEECG-------------GGCCT---TCTTTTTTBCEEEEEEEEEECSS---CC-
T ss_pred -----------------------EEEcccc-------------cccCc---cccccceEeccccEEEEEEecCC---CC-
Confidence 0000000 00000 01123455899999999987542 12
Q ss_pred CeeEEEEE-eEE----eec---------CCC------CC-C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCCh
Q 013344 298 PILGVFRT-FAA----VGV---------DPA------IM-G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFA 348 (445)
Q Consensus 298 ~~~~~i~~-~~~----~~~---------~p~------~~-~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~ 348 (445)
+...+.+ .+. ... .|. .+ + .....+++++|+++|++++|||+|++|+++.
T Consensus 184 -i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~ 262 (335)
T 1u6e_A 184 -IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANS 262 (335)
T ss_dssp -BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCH
T ss_pred -eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH
Confidence 1112221 110 000 110 01 1 1234789999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCC-CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 349 SQFVYCRNKLGLDPE-KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 349 ~~~~~~~e~LGl~~~-~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
.+...+.+.||++++ ++..+. ..+|||++++++.+|+++.+++.. +.|..+++ +|+|++++.+++++
T Consensus 263 ~~~~~~~~~lg~~~~~~~~~~~------~~~Gnt~sAs~~~~L~~~~~~~~~-~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 263 RINELLVKNLQLRPDAVVANDI------EHTGNTSAASIPLAMAELLTTGAA-KPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp HHHHHHHHHHTCCTTCEECCTH------HHHCBCGGGHHHHHHHHHHHHTSS-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHcCCCchhhhhhhh------hhhCcHHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEehhheeEEEEEEe
Confidence 999999999999998 665443 445666666788899998876543 44544433 78899998888887
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-25 Score=227.50 Aligned_cols=249 Identities=17% Similarity=0.242 Sum_probs=182.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-------------------------ccchHHHHHHHHcC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~lG 124 (445)
...+|+.+|+++||+++|+++++|| .|++|+..++.. .....+..++..+|
T Consensus 97 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (437)
T 2gqd_A 97 RFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLG 176 (437)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhC
Confidence 3468999999999999999999999 999998766410 01135677888999
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVD 203 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~ 203 (445)
+ +.|+++|+++|+|++.||..|+++|++|++|++.... .. -+++..+..+..
T Consensus 177 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~------------------------~~~~~~~~~~~~- 229 (437)
T 2gqd_A 177 A--KGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEA------------------------PITHMAIAGFSA- 229 (437)
T ss_dssp C--CSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC------------------------CCSHHHHHHHHH-
T ss_pred C--CCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeecc------------------------ccCHHHHHHHHh-
Confidence 9 4699999999999999999999999999999981100 00 000000001100
Q ss_pred HHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCee
Q 013344 204 SHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283 (445)
Q Consensus 204 s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaA 283 (445)
.+. ++.++.+. ...+| |+. ..+++.++||+++
T Consensus 230 ----------~~~------------------------ls~~~~p~--------~~~~p-fd~-----~~~G~v~geGaaa 261 (437)
T 2gqd_A 230 ----------SRA------------------------LSTNDDIE--------TACRP-FQE-----GRDGFVMGEGAGI 261 (437)
T ss_dssp ----------TTC------------------------BCCCCCTT--------TSSCT-TCT-----TCCSBCBBCEEEE
T ss_pred ----------ccC------------------------ccCCCCCc--------cccCC-CCC-----CCCCceeeceEEE
Confidence 011 11111010 01344 442 2345568999999
Q ss_pred EEeeCHHHHHhcCCCeeEEEEEeEEeecC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-----HH
Q 013344 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-----VY 353 (445)
Q Consensus 284 vvL~s~~~a~~~g~~~~~~i~~~~~~~~~-----p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~-----~~ 353 (445)
+||++.+.|++.+.++++++.+++..... |...+.++..+++++|+++||+++||||+++|++++... ..
T Consensus 262 vvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~a 341 (437)
T 2gqd_A 262 LVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKA 341 (437)
T ss_dssp EEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHH
T ss_pred EEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHH
Confidence 99999999999999999999998876532 333455677999999999999999999999999998852 23
Q ss_pred HHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 354 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 354 ~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
+.+.+|....+++.++.+..+||+.|++|+.++++++.+|+++.
T Consensus 342 l~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ 385 (437)
T 2gqd_A 342 IKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSK 385 (437)
T ss_dssp HHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCC
Confidence 44556666667877777777999999999999999999999743
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-26 Score=229.02 Aligned_cols=257 Identities=18% Similarity=0.128 Sum_probs=188.3
Q ss_pred eeeccccCCCCCCCCC--CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEecc---CCCcccchHHHHHHHHcCCCCCCceE
Q 013344 58 YRTALCKSKRGGFKDT--YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVL---APGSQRASECRMAAFYAGFPETVPVR 132 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~--~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~---~~~~~~~~~a~~~~~~lGl~~~~~~~ 132 (445)
.+|++.+|+. +..++ ++.+|+.+|+++||+++|++|++||.|++++++ ++. ..++..++..+|++ +++++
T Consensus 36 ~~tGi~~r~~-a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~---~~~a~~v~~~lG~~-~~~~~ 110 (357)
T 3s3l_A 36 KLRGIESVTV-ASDAEEDAPPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDL---WPAASYVAHEAVGR-HVPAF 110 (357)
T ss_dssp HHHCCCEEEC-CCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSS---SCHHHHHHHHHTCS-SSCEE
T ss_pred HHcCceEEEe-cCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCccc---ccHHHHHHHHhCCC-CCcEE
Confidence 6899987654 33445 899999999999999999999999999999984 443 36788888899996 79999
Q ss_pred EecCcCcHHHHHHHHHHHHHHcCCCC--eEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 013344 133 TVNRQCSSGLQAVADVAAAIKAGFYD--IGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210 (445)
Q Consensus 133 ~v~~~CsSgl~Al~~A~~~I~sG~~~--~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~ 210 (445)
+++.+|+|+++||..|.++|++|.++ ++.
T Consensus 111 ~v~~aC~~~~~al~~A~~~i~sg~~~~~~vL------------------------------------------------- 141 (357)
T 3s3l_A 111 GLAQRCNGGMGAIELAGAYLGSGIGAGHAAL------------------------------------------------- 141 (357)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSSSSSEEE-------------------------------------------------
T ss_pred EEcCccHHHHHHHHHHHHHHHcCCCCCCEEE-------------------------------------------------
Confidence 99999999999999999999999987 651
Q ss_pred HHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHH
Q 013344 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRS 290 (445)
Q Consensus 211 a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~ 290 (445)
++..|.. +.+.++.+. ...+..++|||+|+||...+
T Consensus 142 -----------------------------vvg~e~~------------s~~~~~~~~---~~~~~lfGDGA~A~vl~~~~ 177 (357)
T 3s3l_A 142 -----------------------------LTTGDRF------------AGPRIDRWN---SVDVTMYGDGAAALVLSTRD 177 (357)
T ss_dssp -----------------------------EEEEECC------------CTTTCCTTT---SSSSCCBCCEEEEEEEESSC
T ss_pred -----------------------------EEEEecc------------ccccccccc---ccCCcccccccEEEEEecCC
Confidence 1111110 000011000 01244589999999998753
Q ss_pred HHHhcCCCeeEEEEEeEEe--e------------cCCC-----CC---C----------------c---cHHHHHHHHHH
Q 013344 291 VAMRKGLPILGVFRTFAAV--G------------VDPA-----IM---G----------------V---GPAVAIPAAVK 329 (445)
Q Consensus 291 ~a~~~g~~~~~~i~~~~~~--~------------~~p~-----~~---~----------------~---~~~~ai~~aL~ 329 (445)
. . ..+.++... + .+|. .+ + . ....+++++|+
T Consensus 178 ~----~----~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~i~~~L~ 249 (357)
T 3s3l_A 178 G----F----ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHRYIDLLVAAKTQALE 249 (357)
T ss_dssp C----S----EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHH
T ss_pred C----C----CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhhhHHHHHHHHHHHHHHHHH
Confidence 1 1 122222111 0 0110 00 0 0 12368899999
Q ss_pred HcCCCCCCccEEEe-cCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe
Q 013344 330 SAGLQLDDIDLFEI-NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC 408 (445)
Q Consensus 330 ~aGl~~~DID~~e~-h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~ 408 (445)
++|++++|||+|.+ |+++.. ...+.++||++++++.. .+++.+||||+++++.+|.++.+++.. +.|+.+++
T Consensus 250 ~~gl~~~did~~v~~hq~~~~-~~~~~~~lgl~~ek~~~-----~~~~~~GNt~aAsipl~L~~~~~~g~l-~~Gd~vll 322 (357)
T 3s3l_A 250 DAGTAIEDIAHAVIPVSRRGT-GHELHDLLGLPDERTSW-----AYGRTTGHVGAGDQYAGLAHLVENALV-QPGDRVLL 322 (357)
T ss_dssp HTTCCGGGCSEEECCSCCCCS-SCCHHHHHTSCGGGBTH-----HHHHHHCBCTTCHHHHHHHHHHHTTCC-CTTCEEEE
T ss_pred HcCCCHHHCCEEEecCcChHH-HHHHHHHcCCCHHHhHH-----HhccccccchHhHHHHHHHHHHHcCCC-CCCCEEEE
Confidence 99999999999996 999988 88899999999999764 345789999999999999999887765 67764443
Q ss_pred --ecccceeEEEEEEcccccc
Q 013344 409 --IGTGMGAAAVFERGDCADE 427 (445)
Q Consensus 409 --~G~G~~~a~~l~~~~~~~~ 427 (445)
+|+|++|+.+++++.....
T Consensus 323 ~~fG~G~t~~a~ll~~~~~p~ 343 (357)
T 3s3l_A 323 FGGGAGYTCTAAVVEILRMPA 343 (357)
T ss_dssp ECCBTTTEEEEEEEEECCCC-
T ss_pred EEEchhhhheeeeEEeccCCC
Confidence 8999999999988866533
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-26 Score=226.29 Aligned_cols=257 Identities=20% Similarity=0.170 Sum_probs=186.2
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..++++..+|+.+|+++||+++|+++++||.|++|+.++++. .+..+..++..+|++ .+|+++++++
T Consensus 44 ~~~Gi~~R~~-~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~-~p~~a~~v~~~lgl~-~~~~~~v~~a 120 (339)
T 1mzj_A 44 TRTGIRSRRI-AEPDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVH-TPPLSVAIAHELGAD-NAGGFDLSAA 120 (339)
T ss_dssp HHHCCSEEEC-CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCC-SSCHHHHHHHHHTCT-TCEEEEEECG
T ss_pred HhcCceEEEE-eCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CChHHHHHHHHhCCC-CccEEEcccc
Confidence 4677776543 345789999999999999999999999999999999988764 445788888899996 3899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|+++|++|.++++...
T Consensus 121 Cas~~~Al~~A~~~i~~G~~~~vLv~------------------------------------------------------ 146 (339)
T 1mzj_A 121 CAGFCHALSIAADAVESGGSRHVLVV------------------------------------------------------ 146 (339)
T ss_dssp GGHHHHHHHHHHHHHHHSSCSCEEEE------------------------------------------------------
T ss_pred chHHHHHHHHHHHHHHCCCCCEEEEE------------------------------------------------------
Confidence 99999999999999999998876110
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
..|. .. +.++++. ..++..++|||+|+||.+.+. .
T Consensus 147 ------------------------g~e~-~s------------~~~~~~d---~~~~~~~GdGA~A~vL~~~~~-----~ 181 (339)
T 1mzj_A 147 ------------------------ATER-MT------------DVIDLAD---RSLSFLFGDGAGAAVVGPSDV-----P 181 (339)
T ss_dssp ------------------------EEEE-GG------------GGSCSSC---TTTTTTBCEEEEEEEEEEESS-----C
T ss_pred ------------------------EEcc-cc------------cccCccc---cccceEeccCceEEEEEecCC-----C
Confidence 0000 00 0000000 112234799999999987542 1
Q ss_pred CeeEEEE-EeEE----eecC---CCC-------------CC--------ccHHHHHHHHHHHcCCCCCCccEEEecCCCh
Q 013344 298 PILGVFR-TFAA----VGVD---PAI-------------MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFA 348 (445)
Q Consensus 298 ~~~~~i~-~~~~----~~~~---p~~-------------~~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~ 348 (445)
.+++..+ +.+. ...+ |.. .+ .....+++++|+++|++++|||+|++|+.+.
T Consensus 182 ~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~ 261 (339)
T 1mzj_A 182 GIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANL 261 (339)
T ss_dssp CBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCH
T ss_pred CeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH
Confidence 2332222 1110 0010 110 01 2345789999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCC-CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEcc
Q 013344 349 SQFVYCRNKLGLDPE-KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERGD 423 (445)
Q Consensus 349 ~~~~~~~e~LGl~~~-~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~~ 423 (445)
.+...+.+.||++++ ++..+. +.+||+++++++..|.++.+++.. +.|..+++ +|+|++++++++++.
T Consensus 262 ~~~d~i~~~lg~~~~~~~~~~~------~~~Gn~~sAs~~~~L~~~~~~g~~-~~G~~vll~~~G~G~t~~~~~l~~~ 332 (339)
T 1mzj_A 262 RIIDVLVDRLGVPEHVVVSRDA------EDTGNTSSASVALALDRLVRSGAV-PGGGPALMIGFGAGLSYAGQALLLP 332 (339)
T ss_dssp HHHHHHHHHHTCCTTSEECCTH------HHHCBCTTHHHHHHHHHHHHHTSS-CTTCEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHHHHhCCCccceeeehh------hhcCchHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEchhheeEEEEEEeC
Confidence 999999999999998 876442 467888888888888888776654 55654443 899999998888874
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=228.31 Aligned_cols=238 Identities=13% Similarity=0.063 Sum_probs=172.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK 153 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~ 153 (445)
++.+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|+ ++++++++.+|+|+++||..|.++|+
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~-~p~~a~~v~~~LGl--~~~~~dv~~aC~g~~~aL~~A~~~i~ 192 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRA-YPAMAIEVQNALGL--GGFAFDMNVACSSATFGLKTAADFVG 192 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCS-BSCHHHHHHHHTTC--CSEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-ccHHHHHHHHHhCC--CCeEEEECCccHHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999988775 45667888889999 48999999999999999999999999
Q ss_pred cCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCC
Q 013344 154 AGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKT 233 (445)
Q Consensus 154 sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~ 233 (445)
+|.++++.+
T Consensus 193 ~g~~~~vLv----------------------------------------------------------------------- 201 (392)
T 3led_A 193 GGSVDAVLM----------------------------------------------------------------------- 201 (392)
T ss_dssp TTSCSEEEE-----------------------------------------------------------------------
T ss_pred CCCCCEEEE-----------------------------------------------------------------------
Confidence 999887611
Q ss_pred CCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeec--
Q 013344 234 GDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-- 311 (445)
Q Consensus 234 g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~-- 311 (445)
+..|. +...++... ...+..++|||+|+||...+... ....+.+......
T Consensus 202 -------vg~E~-------------~S~~~d~~d---r~t~~lFGDGA~A~vl~~~~~~~-----~~~~i~~~~~~s~~~ 253 (392)
T 3led_A 202 -------VNPEI-------------CSGHLNFRD---RDSHFIFGDVATAAIVERADDAQ-----GGWSILGTKLKTQFS 253 (392)
T ss_dssp -------EEEEE-------------GGGGCCTTC---TTTTTTBCEEEEEEEEEEGGGCC-----SSEEEEEEEEEECCC
T ss_pred -------Eeehh-------------cCCcCCcCc---ccCCcccccccEEEEEEecCCCC-----CCCeEEEEEEEEccc
Confidence 00000 000000000 01234489999999998764210 1112332221100
Q ss_pred -------------CCCCCC--------cc----------HHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHc-C
Q 013344 312 -------------DPAIMG--------VG----------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKL-G 359 (445)
Q Consensus 312 -------------~p~~~~--------~~----------~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~L-G 359 (445)
.+..+. .+ ...+++++|+++|++++|||+|.+||++..+...+.++| |
T Consensus 254 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dId~~v~Hqan~~i~~~~~~~llg 333 (392)
T 3led_A 254 NNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGLKRMWLHQANINMNEIIGRKVLG 333 (392)
T ss_dssp SSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECSSCHHHHHHHHHHHHT
T ss_pred cccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEcCCCHHHHHHHHHHhcC
Confidence 010000 01 125789999999999999999999999999999999996 6
Q ss_pred --CCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 360 --LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 360 --l~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
++.+++..+. ..+|||++++++.+|+++.+ .. +.|..+++ +|+|++|+++++++
T Consensus 334 l~~~~~k~~~~l------~~~GNtssAsipl~L~~~~~--~~-~~Gd~vll~gfG~G~t~~~~ll~~ 391 (392)
T 3led_A 334 RDPTRDENVIIL------DDYANTSSAGSIIAFHKHQD--DM-AQGDLGLICSFGAGYSAGTVFVQK 391 (392)
T ss_dssp SCCCTTTBCCCH------HHHCBCGGGHHHHHHHHCCT--TC-CTTCEEEEEEEETTTEEEEEEEEE
T ss_pred CCCCHHHHHHHH------hhhCccHHHHHHHHHHHHhC--CC-CCCCEEEEEEEChhhEeEEEEEEE
Confidence 5677876666 88999999999999998733 22 55654433 99999998888875
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-26 Score=232.67 Aligned_cols=244 Identities=14% Similarity=0.121 Sum_probs=178.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEe-cCcCcHHHHHHHHHHH
Q 013344 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAA 150 (445)
Q Consensus 72 ~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v-~~~CsSgl~Al~~A~~ 150 (445)
+++..+|+.+|+++||+++|+++++||.|+++++++.. .+..+..++..+|++..++++++ +++|+|++.||..|++
T Consensus 81 ~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~ 158 (382)
T 1u0m_A 81 EREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM--MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHD 158 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCC--SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCCC--CCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999988732 45677888889999755899999 9999999999999999
Q ss_pred HHHcCCCCeEec-----CccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccce
Q 013344 151 AIKAGFYDIGSV-----NPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 225 (445)
Q Consensus 151 ~I~sG~~~~v~~-----~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~ 225 (445)
+|++|.++++.+ .+...++ ++-.+
T Consensus 159 ~i~~g~~~~vLv~g~e~~s~~~~~--------------------~d~~~------------------------------- 187 (382)
T 1u0m_A 159 FCTAYPEANALIVACEFCSLCYQP--------------------TDLGV------------------------------- 187 (382)
T ss_dssp HHHHSTTCEEEEEEEEEGGGGCCT--------------------TCCSH-------------------------------
T ss_pred HHHcCCCCEEEEEEEeccchhcCc--------------------ccCCH-------------------------------
Confidence 999999988711 0000000 00000
Q ss_pred ecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEE
Q 013344 226 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRT 305 (445)
Q Consensus 226 ~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~ 305 (445)
+ +..++..++|||+|+||.+.+. .+. ++.+
T Consensus 188 ----------------------------~---------------~~~~~~lfGDGA~A~vL~~~~~---~g~----~i~~ 217 (382)
T 1u0m_A 188 ----------------------------G---------------SLLCNGLFGDGIAAAVVRGRGG---TGV----RLER 217 (382)
T ss_dssp ----------------------------H---------------HHHHHHHBCEEEEEEEEETTTC---SEE----EEEE
T ss_pred ----------------------------H---------------HhhccchhcCCcEEEEEeccCC---CCc----EEEE
Confidence 0 0000122789999999987542 111 2333
Q ss_pred eEEeec--------------------CCCC---CCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCC
Q 013344 306 FAAVGV--------------------DPAI---MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP 362 (445)
Q Consensus 306 ~~~~~~--------------------~p~~---~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~ 362 (445)
+..... .+.. ...... +++++|+++|++++|||+|++|+++..+...+.+.||+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i~d~~~~~lgl~~ 296 (382)
T 1u0m_A 218 NGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDP 296 (382)
T ss_dssp EEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCG
T ss_pred eeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCH
Confidence 222100 0001 112234 8999999999999999999999999999999999999999
Q ss_pred CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEE--eecccceeEEEEEEcc
Q 013344 363 EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISM--CIGTGMGAAAVFERGD 423 (445)
Q Consensus 363 ~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~--~~G~G~~~a~~l~~~~ 423 (445)
++++++. ...+.+|||++++++.+|.++.+++.. +.|..++ .+|+|++++++++++.
T Consensus 297 ~k~~~s~---~~~~~~Gnt~sAsi~~~L~~~~~~g~~-~~Gd~vll~~~G~G~t~~~~vl~~~ 355 (382)
T 1u0m_A 297 HAFRFSR---ATLTEYGNIASAVVLDALRRLFDEGGV-EEGARGLLAGFGPGITAEMSLGCWQ 355 (382)
T ss_dssp GGGHHHH---HHHHHTCBCTTHHHHHHHHHHHHSCCC-CSSCCCEEEEEETTTEEEEEEEEEE
T ss_pred HHHHHHH---HHHHHhCCchhhHHHHHHHHHHHhcCC-CCCCEEEEEEEcccceeEEEEEEEe
Confidence 9987542 122889999999999999999887754 5665333 3899999988888774
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=223.64 Aligned_cols=258 Identities=19% Similarity=0.154 Sum_probs=184.0
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..+++..+|+.+|+++||+++|+ ++||.|++++.++++. .+..+..++..+|++. +|+++++++
T Consensus 38 ~~~Gi~~R~~--~~~~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~-~p~~a~~v~~~lgl~~-~~~~~v~~a 111 (331)
T 2x3e_A 38 SRTGVRQRHI--AGDLGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFC-CPATAPRVAARLGLVG-ALAFDLSAA 111 (331)
T ss_dssp HHHCCCEEEC--CTTCCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEE-ESCSHHHHHHHTTCTT-SEEEEEECG
T ss_pred HhhCceEEEe--cCCCCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCC-CChHHHHHHHHhCCCC-CcEEEEcCc
Confidence 4778876643 22378899999999999999999 8999999999888764 3456788888999964 899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|+++|++|.++++...
T Consensus 112 Cas~~~Al~~A~~~i~~g~~~~vLv~------------------------------------------------------ 137 (331)
T 2x3e_A 112 ATGFVYGLASVGSLISAGLADSALLV------------------------------------------------------ 137 (331)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSEEEEE------------------------------------------------------
T ss_pred ChHHHHHHHHHHHHHHcCCCCEEEEE------------------------------------------------------
Confidence 99999999999999999998887110
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
..|. .. +.++++. ..++..++|||+|+||.+.+.+ .+.
T Consensus 138 ------------------------g~e~-~s------------~~~~~~d---~~~~~~~GdGA~A~vL~~~~~a--~~~ 175 (331)
T 2x3e_A 138 ------------------------GVDT-FS------------HTLDPAD---RSTRALFGDGAGAVVLRAGDAE--EEG 175 (331)
T ss_dssp ------------------------EEEC-GG------------GGSCTTC---HHHHHHBCCEEEEEEEEEECTT--STT
T ss_pred ------------------------Eeec-cc------------cCCCccc---cccceeeccccEEEEEEecCCC--CCC
Confidence 0000 00 0000000 0011127899999999876533 122
Q ss_pred CeeEEEEE-eEE----eecC------C------CC---CC--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 013344 298 PILGVFRT-FAA----VGVD------P------AI---MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS 349 (445)
Q Consensus 298 ~~~~~i~~-~~~----~~~~------p------~~---~~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~ 349 (445)
.+++.... .+. ...+ | .+ .+ .....+++++|+++|++++|||+|++|+++..
T Consensus 176 ~i~~~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~ 255 (331)
T 2x3e_A 176 ALLAFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTR 255 (331)
T ss_dssp BEEEEEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH
T ss_pred ceEEEEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH
Confidence 33333221 110 0011 0 00 01 23357899999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEccc
Q 013344 350 QFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERGDC 424 (445)
Q Consensus 350 ~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~~~ 424 (445)
+...+.+.||++++++..+. +.+|||++++++..|.++.+++.. +.|..+++ +|+|++++++++++..
T Consensus 256 ~~d~~~~~lg~~~~~~~~~~------~~~Gnt~sAs~~~~L~~~~~~~~~-~~G~~vll~~~G~G~~~~~~~l~~~~ 325 (331)
T 2x3e_A 256 ILAAVADQLDLPVERVVSNI------AEVGNTVAASIPLALAHGLRQGIL-RDGGNMVLTGFGAGLTWGSVALRWPK 325 (331)
T ss_dssp HHHHHHHHHTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHHHTTCS-CTTCEEEEEEEETTTEEEEEEEECCC
T ss_pred HHHHHHHHcCCCHHHHhhhH------hhhCcHHHHHHHHHHHHHHHhCCC-CCCCEEEEEEEeHHhhheeeEEEECC
Confidence 99999999999999887543 467778888888899888776654 55654443 8999999988888743
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-25 Score=225.79 Aligned_cols=249 Identities=18% Similarity=0.206 Sum_probs=180.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCC-CCCC----cEEEEeccCCCc-------------------------ccchHHHHHHHHc
Q 013344 74 YPDDLLAPVLKAVIEKTNVDP-SEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYA 123 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~-~dId----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~l 123 (445)
...+|+.+|+++||+++|+++ ++|| .|++|+..++.. ....++..++..+
T Consensus 96 ~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 175 (438)
T 2iwz_A 96 SPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRY 175 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHh
Confidence 356899999999999999998 8888 599998765420 0124677788899
Q ss_pred CCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHH
Q 013344 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202 (445)
Q Consensus 124 Gl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~ 202 (445)
|+ +.|+++|+++|+|++.||..|+++|++|++|++.... .. -+++..+..+..
T Consensus 176 gl--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~------------------------~~~p~~~~~~~~ 229 (438)
T 2iwz_A 176 KL--KGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDS------------------------CISPLSLAGFSR 229 (438)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEC------------------------CCSHHHHHHHHH
T ss_pred CC--CCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeeh------------------------hcCHHHHHHHHh
Confidence 99 4699999999999999999999999999999881100 00 000000001100
Q ss_pred HHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCe
Q 013344 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAG 282 (445)
Q Consensus 203 ~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAa 282 (445)
.+.+... .+ ++. ..+| |+. ..+...++||++
T Consensus 230 -----------~~~ls~~--------~~------------p~~------------~~~p-fd~-----~~~G~~~geGAa 260 (438)
T 2iwz_A 230 -----------ARALSTN--------SD------------PKL------------ACRP-FHP-----KRDGFVMGEGAA 260 (438)
T ss_dssp -----------TTCBCCC--------SC------------TTT------------SCCT-TCT-----TCCSBCBBCEEE
T ss_pred -----------cCCcCCC--------CC------------CCc------------cccc-CCC-----CCCCEEeeceEE
Confidence 0111000 00 011 1344 443 224456899999
Q ss_pred eEEeeCHHHHHhcCCCeeEEEEEeEEeecC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----H-H
Q 013344 283 AVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----F-V 352 (445)
Q Consensus 283 AvvL~s~~~a~~~g~~~~~~i~~~~~~~~~-----p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~-~ 352 (445)
++||++.+.|++.+.++++++.+++..... |...+.+...+++++|+++|++++||||+|+|++++.. + .
T Consensus 261 avvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~ 340 (438)
T 2iwz_A 261 VLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENK 340 (438)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHH
T ss_pred EEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCCCcccCHHHHH
Confidence 999999999999999999999998876532 44456677899999999999999999999999999875 2 2
Q ss_pred HHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 353 YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 353 ~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
.+.+.+|....+++.++.+..+||+.|++|+.++++++.+|+++.
T Consensus 341 al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ 385 (438)
T 2iwz_A 341 AIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQK 385 (438)
T ss_dssp HHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCc
Confidence 333445655567777777777899999999999999999998743
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=226.53 Aligned_cols=250 Identities=15% Similarity=0.120 Sum_probs=181.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEe-cCcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v-~~~CsSgl~Al~~A~~~ 151 (445)
++..+|+.+|+++||+++|+++++||.|+++++++.. .+..+..++..+|++..++++++ +++|+|++.||..|+++
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~ 188 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFI--APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY 188 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCc--cChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999988843 45678888889999765778998 99999999999999999
Q ss_pred HHcCCCCeEe-----cCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 152 IKAGFYDIGS-----VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 152 I~sG~~~~v~-----~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
|++|.++++. ..+...+ |+-.|.+
T Consensus 189 i~~G~~~~vLv~g~e~~s~~~~---------------------~~~~r~~------------------------------ 217 (393)
T 1ted_A 189 VRAHPAMKALVVCIELCSVNAV---------------------FADDIND------------------------------ 217 (393)
T ss_dssp HHHSTTCEEEEEEEEECGGGCC---------------------CCSSHHH------------------------------
T ss_pred HHcCCCCEEEEEEEEeccccCC---------------------CCCCHHH------------------------------
Confidence 9999998871 1110000 0000000
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEe
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTF 306 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~ 306 (445)
...+..++|||+|+||.+.+.+...+. .+.++.++
T Consensus 218 --------------------------------------------~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~ 252 (393)
T 1ted_A 218 --------------------------------------------VVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSS 252 (393)
T ss_dssp --------------------------------------------HHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEE
T ss_pred --------------------------------------------hhhhhhhcCccEEEEEecCCCccccCc-ceeeeecc
Confidence 001122789999999987643211111 23455554
Q ss_pred EEeec-CC-C------------C-CC--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCC
Q 013344 307 AAVGV-DP-A------------I-MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 307 ~~~~~-~p-~------------~-~~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~ 363 (445)
+.... +. . . .+ .....+++++|+++|++++|||+|++|+++..+...+.+.||++++
T Consensus 253 ~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i~d~~~~~lgl~~~ 332 (393)
T 1ted_A 253 FSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAE 332 (393)
T ss_dssp EEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHHHHHHHHHTCCGG
T ss_pred ceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHHHHHHHHHcCCCHH
Confidence 33211 10 0 0 11 1234688999999999999999999999999999999999999999
Q ss_pred CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEcc
Q 013344 364 KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERGD 423 (445)
Q Consensus 364 ~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~~ 423 (445)
++..+.- ..+.+|||++++++.+|.++.+++...+.|..+++ +|+|++++++++++-
T Consensus 333 k~~~s~~---~~~~~GNt~sAsi~~~L~~~~~~g~~~~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 333 LAAQSWD---VLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp GGHHHHH---HHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHH---HHHhhCCchHhHHHHHHHHHHhcCccCCCCCeEEEEEeccchhhhhhheeec
Confidence 9864311 12889999999999999999877653125654433 899999988888764
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=219.75 Aligned_cols=257 Identities=19% Similarity=0.199 Sum_probs=180.4
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..++.+..+|+.+|+++||+++|++|++||.|++|+.+++.. .+.++..++..+|+ ++|+++++++
T Consensus 34 ~~~Gi~~r~~-~~~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl--~~~~~~v~~a 109 (322)
T 1ub7_A 34 TRTGIKERRV-AAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDAL-FPDTAALVQARFGL--KAFAYDLLAG 109 (322)
T ss_dssp HHTCCCEEEE-CCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEE-ESCHHHHHHHHTTC--CCEEEEEECS
T ss_pred HhcCceEEee-cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCC--CCEEEeeCcc
Confidence 4677776543 345789999999999999999999999999999999887764 44578888899999 5899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|+++|++|.++++...
T Consensus 110 Cas~~~al~~A~~~i~~g~~~~vlv~------------------------------------------------------ 135 (322)
T 1ub7_A 110 CPGWIYALAQAHALVEAGLAQKVLAV------------------------------------------------------ 135 (322)
T ss_dssp TTHHHHHHHHHHHHHHTTSCSEEEEE------------------------------------------------------
T ss_pred chHHHHHHHHHHHHHHcCCCCEEEEE------------------------------------------------------
Confidence 99999999999999999999887110
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
..|. .. +.++++. ..++..++|||+|+||.+.+. +.
T Consensus 136 ------------------------g~e~-~s------------~~~~~~d---~~~~~~~GdGA~A~vL~~~~~----~~ 171 (322)
T 1ub7_A 136 ------------------------GAEA-LS------------KIIDWND---RATAVLFGDGGGAAVVGKVRE----GY 171 (322)
T ss_dssp ------------------------EEEC-GG------------GTSCTTC---HHHHTTBCCEEEEEEEECCCT----TC
T ss_pred ------------------------Eech-hc------------cccChhh---cccceeeccccEEEEEEecCC----CC
Confidence 0000 00 0000000 011234799999999987643 22
Q ss_pred CeeEEEE-EeEEe----ecC------CCC---------CC--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 013344 298 PILGVFR-TFAAV----GVD------PAI---------MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS 349 (445)
Q Consensus 298 ~~~~~i~-~~~~~----~~~------p~~---------~~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~ 349 (445)
.+++... +.+.. ..+ |.. .+ .....+++++|+++|++++|||+|++|+++..
T Consensus 172 ~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~ 251 (322)
T 1ub7_A 172 GFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLR 251 (322)
T ss_dssp EEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHH
T ss_pred ceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH
Confidence 3343332 11110 000 211 01 23457999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEcc
Q 013344 350 QFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERGD 423 (445)
Q Consensus 350 ~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~~ 423 (445)
+...+.+.||++++++..+ +-.+||..++++...+.+++ +++.. +.|..+++ +|.|++++.+++++.
T Consensus 252 ~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~As~~~~l~~~l----~~g~~-~~g~~~l~~~~G~G~~~~~~vl~~~ 320 (322)
T 1ub7_A 252 IIDAARERLGLPWERVAVN--VDRYGNTSTASIPLALKEAV----DAGRI-REGDHVLLVSFGAGLTWAAAVLTWG 320 (322)
T ss_dssp HHHHHHHTTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHH----HHTSS-CTTCEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHHHcCCCHHHHHHH--HHhhCcHHHHHHHHHHHHHH----HhCCC-CCCCEEEEEEEChhheeEEEEEEeC
Confidence 9999999999999888644 33577887777766544443 33332 33433332 788889888888763
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=227.38 Aligned_cols=244 Identities=16% Similarity=0.151 Sum_probs=178.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEec-CcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~-~~CsSgl~Al~~A~~~ 151 (445)
.+..+|+.+|+++||+++|++|++||.|+++++++.. .+..+..++..+|++..+++++++ ++|+|++.||..|+++
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~ 170 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGII--IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASL 170 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCC--CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999988643 356778888899997557999997 8999999999999999
Q ss_pred HHcCCCCeEe-----cCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 152 IKAGFYDIGS-----VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 152 I~sG~~~~v~-----~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
|++|.++++. ..+.... .
T Consensus 171 i~~g~~~~vLv~g~e~~s~~~~----------------------~----------------------------------- 193 (374)
T 2h84_A 171 AKASPRNRILVVCTEVCSLHFS----------------------N----------------------------------- 193 (374)
T ss_dssp HTTCTTCEEEEEEEECCGGGCC----------------------C-----------------------------------
T ss_pred HHcCCCCEEEEEEEEecchhhc----------------------C-----------------------------------
Confidence 9999998871 1110000 0
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEe
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTF 306 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~ 306 (445)
+.+.+ +..++..++|||+|+||.+.+.++..+ +. ++.++
T Consensus 194 -----------------------~~dr~---------------~~~~~~lfGDGA~A~vL~~~~~~~~~~--~~-~l~~~ 232 (374)
T 2h84_A 194 -----------------------TDGGD---------------QMVASSIFADGSAAYIIGCNPRIEETP--LY-EVMCS 232 (374)
T ss_dssp -----------------------SSSHH---------------HHHHHHHBCCEEEEEEEESSCCTTCCC--CE-EEEEE
T ss_pred -----------------------CCCHH---------------HHhhhhhhccCcEEEEEecCCCcccCC--ce-eEEee
Confidence 00000 000112278999999998765432112 22 44444
Q ss_pred EEeecC-----------CCC----CC--------ccHHHHHHHHHHHcC------CCCCCccEEEecCCChHHHHHHHHH
Q 013344 307 AAVGVD-----------PAI----MG--------VGPAVAIPAAVKSAG------LQLDDIDLFEINEAFASQFVYCRNK 357 (445)
Q Consensus 307 ~~~~~~-----------p~~----~~--------~~~~~ai~~aL~~aG------l~~~DID~~e~h~~~~~~~~~~~e~ 357 (445)
+....+ +.- ++ .....+++++|+++| ++++|||+| +|+++..+...+.+.
T Consensus 233 g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d~~~~~ 311 (374)
T 2h84_A 233 INRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSILMNIENS 311 (374)
T ss_dssp EEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHHHHHHH
T ss_pred eeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCCCHHHHHHHHHH
Confidence 332111 000 01 123478899999999 999999999 999999999999999
Q ss_pred cCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceee--EEEeecccceeEEEEEEcc
Q 013344 358 LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGV--ISMCIGTGMGAAAVFERGD 423 (445)
Q Consensus 358 LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~--~~~~~G~G~~~a~~l~~~~ 423 (445)
||++++++..+. ...+.+|||++++++.+|+++.+++. .|. ..+++|+|++|+++++++-
T Consensus 312 lgl~~~k~~~s~---~~~~~~Gnt~sasi~~~L~~~~~~~~---~Gd~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 312 LGIDPKQTKNTW---DVYHAYGNMSSASVIFVMDHARKSKS---LPTYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp TTCCGGGGHHHH---HHHHHHCBCTTHHHHHHHHHHHTCSC---CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred cCCCHHHHHHHH---HHHHHhCCchhhHHHHHHHHHHhhcC---CCCeEEEEEeccchhhhhhhheec
Confidence 999999987431 12388999999999999999987654 353 3344999999988888763
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-24 Score=218.83 Aligned_cols=246 Identities=19% Similarity=0.218 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc--------------------c-----cchHHHHHHHHcCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS--------------------Q-----RASECRMAAFYAGF 125 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~--------------------~-----~~~~a~~~~~~lGl 125 (445)
..+|+.+|+++||+++|+++++|| .|++|+..++.. . ...++..++..+|+
T Consensus 93 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 172 (430)
T 1ox0_A 93 YSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGA 172 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcC
Confidence 458999999999999999999999 589988765420 0 01345667778999
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
. .|+++|+++|+|++.||..|+++|++|++|++..... +.. +++..+..+..
T Consensus 173 ~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~--------e~~---------------~~p~~~~~~~~--- 224 (430)
T 1ox0_A 173 N--GVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGT--------EAS---------------ITPFAIAGFQA--- 224 (430)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEE--------ECC---------------CSHHHHHHHHH---
T ss_pred C--CceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeee--------ccc---------------cCHHHHHHHHh---
Confidence 4 6999999999999999999999999999999811000 000 00000000000
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEE
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvv 285 (445)
.+ .++.++.++. ..+| |+. ..+.+.++|||+++|
T Consensus 225 --------~~------------------------~ls~~~~p~~--------~~~p-Fd~-----~~~g~~~geGAaavv 258 (430)
T 1ox0_A 225 --------LT------------------------ALSTTEDPTR--------ASIP-FDK-----DRNGFVMGEGSGMLV 258 (430)
T ss_dssp --------TT------------------------CBCCCSSTTS--------SSCT-TBT-----TCCSBCBCCEEEEEE
T ss_pred --------CC------------------------CccCCCCCCC--------CCCC-CCC-----CCCCccccceEEEEE
Confidence 01 1111111111 1233 432 246677999999999
Q ss_pred eeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHH-----HHH
Q 013344 286 LMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV-----YCR 355 (445)
Q Consensus 286 L~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~-----~~~ 355 (445)
|++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+++|++++.... .+.
T Consensus 259 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~ 338 (430)
T 1ox0_A 259 LESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIV 338 (430)
T ss_dssp EEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHH
T ss_pred ECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHH
Confidence 9999999999999999999887653 234445667789999999999999999999999999998642 233
Q ss_pred HHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 356 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 356 e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
+.+|- .-+++..++. +||+.|++|+.++++++.+|+++.
T Consensus 339 ~~~g~-~~~v~s~k~~--~GH~~gAaG~~~~i~~~~~l~~~~ 377 (430)
T 1ox0_A 339 AVLGK-EVPVSSTKSF--TGHLLGAAGAVEAIVTIEAMRHNF 377 (430)
T ss_dssp HHHCS-SSEEECTHHH--HCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHhCC-Cceecccccc--cccchhhHHHHHHHHHHHHHhcCc
Confidence 44554 2356666655 699999999999999999999753
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=219.22 Aligned_cols=256 Identities=18% Similarity=0.181 Sum_probs=179.3
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. . .+.+..+|+.+|+++||+++|+++++||.|++|+.++++. .+.++..++..+|++. +|+++++++
T Consensus 35 ~~~Gi~~r~~-~-~~~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~-~~~~a~~v~~~lgl~~-~~~~~v~~~ 110 (309)
T 2ebd_A 35 TRTGIKERRI-A-KEETITYMATQAAKEALREANLSPEELDLIILATLTPQKR-FPSTACLVQAQLKAKG-VYAFDISAA 110 (309)
T ss_dssp HHHCCCEEEE-C-SSCCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSS-SSCHHHHHHHHHTCTT-CEEEEEECG
T ss_pred HHhCceeeee-c-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCCC-ceEEecCcc
Confidence 3566665442 1 2378899999999999999999999999999999987764 4567888999999964 799999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|+++|++|.++++...
T Consensus 111 C~s~~~al~~A~~~i~~g~~~~vlv~------------------------------------------------------ 136 (309)
T 2ebd_A 111 CSGFIYALDIADSFIKSGKAKNVLVI------------------------------------------------------ 136 (309)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSEEEEE------------------------------------------------------
T ss_pred chHHHHHHHHHHHHHHCCCCCEEEEE------------------------------------------------------
Confidence 99999999999999999999887110
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
..|. .. +.++++ ...++..++|||+|+||.+.+.+ .
T Consensus 137 ------------------------g~e~-~s------------~~~~~~---~~~~~~~~gdGaaA~vL~~~~~~----~ 172 (309)
T 2ebd_A 137 ------------------------GAEK-LS------------EAVDWE---DRSTCVLFGDGAGAVVVTRSEDK----S 172 (309)
T ss_dssp ------------------------EEEE-GG------------GTCCTT---CTTTTTTBCEEEEEEEEEECSSS----C
T ss_pred ------------------------Eecc-cc------------cccCcc---chhhccccccccEEEEEEecCCC----C
Confidence 0000 00 000000 01123458999999999876532 1
Q ss_pred CeeEEEEEeEEe---e-cCC-----CCCCc--------cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCC
Q 013344 298 PILGVFRTFAAV---G-VDP-----AIMGV--------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL 360 (445)
Q Consensus 298 ~~~~~i~~~~~~---~-~~p-----~~~~~--------~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl 360 (445)
.+++...+.... . ..| ...+. ....+++++|+++|++++|||+|++|+++..+...+.+.||+
T Consensus 173 ~i~~~~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~~~~~~~lg~ 252 (309)
T 2ebd_A 173 DILATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLNI 252 (309)
T ss_dssp EEEEEEEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHHTTC
T ss_pred ceeEEEEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCC
Confidence 133332221000 0 011 00111 345799999999999999999999999999999999999999
Q ss_pred CCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 361 DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 361 ~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
+++++..+ +-.+||+.++++...+.+++. ++.. +.|..+++ +|.|++++.+++++
T Consensus 253 ~~~~~~~~--~~~~Gh~~~As~~~~L~~~~~----~g~~-~~G~~~l~~~~G~G~~~~~~~l~~ 309 (309)
T 2ebd_A 253 PKEKVFVN--IQKYGNTSAASIPIALHEAIK----EGKV-KRGDLILMTAMGGGLTWGAVLLRY 309 (309)
T ss_dssp CGGGBCCC--HHHHCBCGGGHHHHHHHHHHH----TTCC-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CHHHhhhh--HhhhcchHHHHHHHHHHHHHH----cCCC-CCCCEEEEEEEchhhhhEEEEEEC
Confidence 99887644 345788888877666655543 3322 33443332 78899998888764
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.93 E-value=9e-24 Score=217.38 Aligned_cols=245 Identities=18% Similarity=0.211 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHHcCCC---CCCCCcEEEEeccCCCcc-------------------------cchHHHHHHHHcCCC
Q 013344 75 PDDLLAPVLKAVIEKTNVD---PSEVGDIVVGTVLAPGSQ-------------------------RASECRMAAFYAGFP 126 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~---~~dId~vi~g~~~~~~~~-------------------------~~~~a~~~~~~lGl~ 126 (445)
..+|+.+|+++||+++|++ +++| .|++|+..+++.. ....+..++..+|+
T Consensus 99 ~~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl- 176 (434)
T 2gp6_A 99 LQRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA- 176 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC-
Confidence 3689999999999999983 3344 5888887665410 01246677789999
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEec---CccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHH
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSV---NPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVD 203 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~---~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~ 203 (445)
+.|+++|+++|+|++.||..|+++|++|++|++.. .... +. +.+...
T Consensus 177 -~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~--------------------------~~---~~~~~~ 226 (434)
T 2gp6_A 177 -KAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRI--------------------------EA---VPIAGF 226 (434)
T ss_dssp -CSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCC--------------------------CH---HHHHHH
T ss_pred -CCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeecccc--------------------------CH---HHHHHH
Confidence 47999999999999999999999999999999811 1000 00 011110
Q ss_pred HHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCee
Q 013344 204 SHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283 (445)
Q Consensus 204 s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaA 283 (445)
++.+ + .... +.+ .++.. .+| |+. ..+...++||+++
T Consensus 227 ~~~~------~-~ls~------------~~~-------~p~~~------------~~p-fd~-----~~~g~v~gdGAaa 262 (434)
T 2gp6_A 227 AQMR------I-VMST------------NND-------DPAGA------------CRP-FDR-----DRDGFVFGEGGAL 262 (434)
T ss_dssp HTTT------S-SCCC------------CTT-------CTTTS------------CCS-SBT-----TCCCCCBBCCEEE
T ss_pred HHHH------H-HhcC------------CCC-------CCCCc------------eec-ccc-----cCCCcceecceEE
Confidence 0000 0 0000 000 01111 233 321 2345568999999
Q ss_pred EEeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HH-H
Q 013344 284 VLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FV-Y 353 (445)
Q Consensus 284 vvL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~-~ 353 (445)
+||++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+++|...+.. +. .
T Consensus 263 vvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~a 342 (434)
T 2gp6_A 263 LLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRA 342 (434)
T ss_dssp EEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHHHHHHHHHH
T ss_pred EEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccchHHHHHH
Confidence 999999999988999999999888764 3444556677899999999999999999999999665543 11 1
Q ss_pred HHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 354 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 354 ~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
+.+.+| .+++|+++++..+||+.|++|+.++++++.+|+++.
T Consensus 343 l~~~fg--~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ 384 (434)
T 2gp6_A 343 INNALG--GNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQV 384 (434)
T ss_dssp HHHHHT--TCCCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSC
T ss_pred HHHHhc--cCCCCcccchhhhcCchhhhHHHHHHHHHHHHhcCc
Confidence 222233 337999999999999999999999999999999753
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9e-25 Score=216.33 Aligned_cols=258 Identities=20% Similarity=0.199 Sum_probs=182.5
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+.||. .+|++.+|+. +..++ +.+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|++. ++
T Consensus 32 ~~~i~--~~~Gi~~R~~-a~~~e-~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~~-~~ 105 (321)
T 3il6_A 32 AAWIH--SRTGISERRI-VTQEN-TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFN-MPSVACQVQGAIGATE-AF 105 (321)
T ss_dssp HHHHH--HHHSCSEEEC-CSSCC-HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCTT-CE
T ss_pred hhhhh--hhcCceEEEE-CCCCC-HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcC-CCcHHHHHHHHcCCCC-ce
Confidence 34554 6889987654 33445 999999999999999999999999999999988775 5667888999999974 99
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~ 210 (445)
+++++.+|+|+++||..|+++|++|.++++..
T Consensus 106 ~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv------------------------------------------------ 137 (321)
T 3il6_A 106 AFDISAACSGFVYALSMAEKLVLSGRYQTGLV------------------------------------------------ 137 (321)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTSSCCCEEE------------------------------------------------
T ss_pred EEEeCcccHHHHHHHHHHHHHHHCCCCCEEEE------------------------------------------------
Confidence 99999999999999999999999998877611
Q ss_pred HHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHH
Q 013344 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRS 290 (445)
Q Consensus 211 a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~ 290 (445)
+..|.. ...+++.. ...+..++|||+|+||.+.+
T Consensus 138 ------------------------------vg~e~~-------------s~~~~~~d---r~~~~lfGDGA~A~vl~~~~ 171 (321)
T 3il6_A 138 ------------------------------IGGETF-------------SKMLDWTD---RSTAVLFGDGAAGVLIEAAE 171 (321)
T ss_dssp ------------------------------EEEECG-------------GGGSCTTC---TTTGGGBCCEEEEEEEEEES
T ss_pred ------------------------------EEEccc-------------cccCCccc---cccceeeccccEEEEEEEcC
Confidence 000000 00000000 01123479999999998754
Q ss_pred HHHhcCCCeeEEEEEe-EE----eecC------CC---------CCCc-c---H---HHHHHHHHHHcCCCCCCccEEEe
Q 013344 291 VAMRKGLPILGVFRTF-AA----VGVD------PA---------IMGV-G---P---AVAIPAAVKSAGLQLDDIDLFEI 343 (445)
Q Consensus 291 ~a~~~g~~~~~~i~~~-~~----~~~~------p~---------~~~~-~---~---~~ai~~aL~~aGl~~~DID~~e~ 343 (445)
. ..++...... +. ...+ |. .+.. + + ...+++++++. +.++|||+|.+
T Consensus 172 ~-----~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~-l~~~did~~v~ 245 (321)
T 3il6_A 172 T-----PHFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-VTDETVDYLLL 245 (321)
T ss_dssp S-----CCEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT-CCGGGCSEEEE
T ss_pred C-----CCEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH-cCcccCCEEEE
Confidence 2 1122211111 00 0000 00 0100 1 1 12333334332 33899999999
Q ss_pred cCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCcee--eEEEe--ecccceeEEEE
Q 013344 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG--VISMC--IGTGMGAAAVF 419 (445)
Q Consensus 344 h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G--~~~~~--~G~G~~~a~~l 419 (445)
||++..+...+.+.||++++++..+. +.+||||+++++.+|+++.+++.. +.| +.+++ +|+|++|+.++
T Consensus 246 Hq~~~~i~~~~~~~lgl~~ek~~~~l------~~~GNt~sasi~~~L~~~~~~g~~-~~G~~d~vll~~fG~G~t~~~~~ 318 (321)
T 3il6_A 246 HQANVRIIDKIARKTKISREKFLTNM------DKYGNTSAASIPILLDEAVENGTL-ILGSQQRVVLTGFGGGLTWGSLL 318 (321)
T ss_dssp CCSCHHHHHHHHHHHTCCGGGBCCCG------GGTCBCGGGHHHHHHHHHHHTTSS-CTTSCCEEEEEEEETTTEEEEEE
T ss_pred cCCCHHHHHHHHHHcCcCHHHhhhhH------hhcccHHHHHHHHHHHHHHHhCCC-CCCCCCEEEEEEEehhheeEEEE
Confidence 99999999999999999999998766 899999999999999999887765 667 54333 99999998887
Q ss_pred EE
Q 013344 420 ER 421 (445)
Q Consensus 420 ~~ 421 (445)
++
T Consensus 319 l~ 320 (321)
T 3il6_A 319 LT 320 (321)
T ss_dssp EE
T ss_pred EE
Confidence 75
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-24 Score=217.26 Aligned_cols=242 Identities=17% Similarity=0.177 Sum_probs=172.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-------------------------ccchHHHHHHHHcC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~lG 124 (445)
...+|+.+++++||+++|+++++|| .|++|+..+++. ....++..++..+|
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 157 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence 4578999999999999999999999 799998755431 01346777888999
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
+. .|+++|+++|+|++.||..|+++|++| +|++..... + .-+++..+..+..
T Consensus 158 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~--------e---------------~~~~~~~~~~~~~-- 209 (415)
T 1tqy_B 158 MR--GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGV--------D---------------SALDPWGWVSQIA-- 209 (415)
T ss_dssp CC--SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEE--------E---------------CCCSHHHHHHHHT--
T ss_pred CC--CceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeee--------c---------------CcCCHHHHHHHHh--
Confidence 94 699999999999999999999999999 999811000 0 0000000000000
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeec----cCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCC
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTIS----VDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDG 280 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~----~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DG 280 (445)
.+ .++ +++. .+| |+. ..+.+.++||
T Consensus 210 ---------~~------------------------~ls~~~~~~~~------------~~p-fd~-----~~~G~~~geG 238 (415)
T 1tqy_B 210 ---------SG------------------------RISTATDPDRA------------YLP-FDE-----RAAGYVPGEG 238 (415)
T ss_dssp ---------TS------------------------CBCCCSCGGGS------------CCT-TST-----TCCCBCBBCE
T ss_pred ---------cc------------------------CccCCCCCCCC------------cCC-CCC-----CCCCcceeee
Confidence 00 111 1111 233 332 2356678999
Q ss_pred CeeEEeeCHHHHHhcCC-CeeEEEEEeEEeecCCCCCCc--cHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHH
Q 013344 281 AGAVLLMKRSVAMRKGL-PILGVFRTFAAVGVDPAIMGV--GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVY 353 (445)
Q Consensus 281 AaAvvL~s~~~a~~~g~-~~~~~i~~~~~~~~~p~~~~~--~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~~ 353 (445)
++++||++.+.|++.+. ++++++.+++........... ++..+++++|+++|++++||||+++|.+++.. +..
T Consensus 239 aaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~ 318 (415)
T 1tqy_B 239 GAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEAR 318 (415)
T ss_dssp EEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHH
T ss_pred EEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHH
Confidence 99999999999999999 999999998876432211111 77899999999999999999999999999853 333
Q ss_pred HHHH-cCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 354 CRNK-LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 354 ~~e~-LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.++. +|-. ++..+..+..+||+.|++|+++++.++.+|+++
T Consensus 319 al~~~~g~~--~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~ 360 (415)
T 1tqy_B 319 AIGRVFGRE--GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREG 360 (415)
T ss_dssp HHHHHHCTT--CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCC--CceEeccchhhccChHHHHHHHHHHHHHHHhcC
Confidence 3333 3432 244444444579999999999999999999874
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-24 Score=221.95 Aligned_cols=250 Identities=16% Similarity=0.214 Sum_probs=178.7
Q ss_pred CHHHHHHHHHHHHHHHcCC-CCCCCC----cEEEEeccCCCc-----------c--------------cchHHHHHHHHc
Q 013344 74 YPDDLLAPVLKAVIEKTNV-DPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYA 123 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi-~~~dId----~vi~g~~~~~~~-----------~--------------~~~~a~~~~~~l 123 (445)
...+|+.+|+++||+++|+ ++++|| .|++|+..++.. . ...++..++..+
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 3568999999999999999 999888 599998765310 0 013567788899
Q ss_pred CCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecC--ccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHH
Q 013344 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVN--PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 201 (445)
Q Consensus 124 Gl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~--~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a 201 (445)
|+. .|+++|+++|+|++.||..|+++|++|++|++... .... +...+..+.
T Consensus 167 gl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~-------------------------~~~~~~~~~ 219 (431)
T 2ix4_A 167 GFQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSI-------------------------DALSVAGFS 219 (431)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC-------------------------SHHHHHHHH
T ss_pred CCC--CceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeecccc-------------------------CHHHHHHHH
Confidence 994 69999999999999999999999999999998110 0000 000000000
Q ss_pred HHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCC
Q 013344 202 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 281 (445)
Q Consensus 202 ~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGA 281 (445)
. .+.+ ... ...+.+. ..+| |+. ..+++.++|||
T Consensus 220 ~-----------~~~l------------------------s~~----~~~~~~~--~~~p-fd~-----~~~g~~~gdGA 252 (431)
T 2ix4_A 220 R-----------SRAL------------------------STK----FNSSPQE--ASRP-FDC-----DRDGFVIGEGS 252 (431)
T ss_dssp H-----------TTCB------------------------CCT----TTTCGGG--SCCT-TBT-----TCCSBCBBCEE
T ss_pred h-----------cccc------------------------Ccc----ccCCccc--cccc-CCC-----CCCCceeecce
Confidence 0 0110 000 0001111 1233 321 23455699999
Q ss_pred eeEEeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HH
Q 013344 282 GAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FV 352 (445)
Q Consensus 282 aAvvL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~ 352 (445)
+++||++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+++|.+++.. +.
T Consensus 253 aavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~~D~~E~ 332 (431)
T 2ix4_A 253 GVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEA 332 (431)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHH
T ss_pred EEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHH
Confidence 99999999999999999999999888765 3455566778899999999999999999999999998764 22
Q ss_pred -HHHHHcCCC--CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 353 -YCRNKLGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 353 -~~~e~LGl~--~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
.+.+.++.. ..+++.++++..+||+.|++|+.++++++.+|+++.
T Consensus 333 ~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ 380 (431)
T 2ix4_A 333 RAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGV 380 (431)
T ss_dssp HHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCC
Confidence 222333322 256778888889999999999999999999999753
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=223.53 Aligned_cols=248 Identities=19% Similarity=0.262 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-------------c-----------cchH---HH----HH
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------Q-----------RASE---CR----MA 119 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~-------------~-----------~~~~---a~----~~ 119 (445)
..+|+.+++++||+++|+++++|| .|++|+..+++. . ...+ +. .+
T Consensus 73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 152 (424)
T 1tqy_A 73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence 468999999999999999999999 599998766431 0 0112 23 67
Q ss_pred HHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHH
Q 013344 120 AFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQD 198 (445)
Q Consensus 120 ~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d 198 (445)
+..+|+. .|+++|+++|+|++.||..|+++|++|++|++.... ... +++..+.
T Consensus 153 a~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~------------------------~~~~~~~ 206 (424)
T 1tqy_A 153 AWAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTP------------------------ITPIVVA 206 (424)
T ss_dssp HHHHTCC--SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC------------------------CSHHHHH
T ss_pred HHhcCCC--CceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeeccc------------------------CCHHHHH
Confidence 7789994 699999999999999999999999999999981100 000 0000000
Q ss_pred HHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCC
Q 013344 199 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVS 278 (445)
Q Consensus 199 ~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~ 278 (445)
.+. ..+.+.. + ..++|.. .+| |+. ..++..++
T Consensus 207 ~~~-----------~~~~ls~------------~-------~~~p~~~------------~rp-fd~-----~~~G~v~g 238 (424)
T 1tqy_A 207 CFD-----------AIRATTA------------R-------NDDPEHA------------SRP-FDG-----TRDGFVLA 238 (424)
T ss_dssp HHH-----------HTTCBCC------------C-------CSCGGGC------------CCT-TBT-----TCCCBCEE
T ss_pred HHH-----------hhccccC------------C-------CCCCCCC------------ccC-CCC-----CCCceeee
Confidence 000 0011100 0 0011111 333 332 23455689
Q ss_pred CCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH---
Q 013344 279 DGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ--- 350 (445)
Q Consensus 279 DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~-----p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~--- 350 (445)
||++++||++.+.|++.+.++++++.+++..... |...+.+...+++++|+++|++++||||+|+|++++..
T Consensus 239 eGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~ 318 (424)
T 1tqy_A 239 EGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDR 318 (424)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHH
T ss_pred cceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCH
Confidence 9999999999999999999999999988876432 44455667899999999999999999999999999874
Q ss_pred -HH-HHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 351 -FV-YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 351 -~~-~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+. .+.+.++....+++.++.+..+||+.|++|+.++++++.+|+++
T Consensus 319 ~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~ 366 (424)
T 1tqy_A 319 HETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHG 366 (424)
T ss_dssp HHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcC
Confidence 22 33444555555666666666689999999999999999999875
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.1e-24 Score=216.30 Aligned_cols=242 Identities=21% Similarity=0.233 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeccCCCcc-------------------------cchHHHHHHHHcCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ-------------------------RASECRMAAFYAGF 125 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~----vi~g~~~~~~~~-------------------------~~~~a~~~~~~lGl 125 (445)
..+|+.+|+++||+++|+ +++|. |++|+..+++.. ....+..++..+|+
T Consensus 83 ~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 160 (416)
T 2wge_A 83 VQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA 160 (416)
T ss_dssp HHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc
Confidence 457999999999999998 56664 999988765410 01245667778999
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEe---cCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHH
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGS---VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~---~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~ 202 (445)
+.|+++++++|+|+++||..|+++|++|++|++. ...... + ..+..
T Consensus 161 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~----------~-------------------~~~~~ 209 (416)
T 2wge_A 161 --RAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIE----------A-------------------LPIAA 209 (416)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCC----------H-------------------HHHHH
T ss_pred --CCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccc----------h-------------------HHHHH
Confidence 4799999999999999999999999999999981 110000 0 00000
Q ss_pred HHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCe
Q 013344 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAG 282 (445)
Q Consensus 203 ~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAa 282 (445)
+. ..+.+ ... +.+.+. ..+| |+. ..++..++||++
T Consensus 210 --~~------~~~~l------------------------~~~-----~~~~~~--~~~p-fd~-----~~dg~v~geGaa 244 (416)
T 2wge_A 210 --FS------MMRAM------------------------STR-----NDEPER--ASRP-FDK-----DRDGFVFGEAGA 244 (416)
T ss_dssp --HH------TTTCB------------------------CCC-----TTSGGG--SCCT-TBT-----TCCCBCBBCEEE
T ss_pred --HH------hcchh------------------------hcc-----ccCCcc--cccc-ccc-----CCCCccccCceE
Confidence 00 00000 000 000011 1233 332 235566899999
Q ss_pred eEEeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHH
Q 013344 283 AVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVY 353 (445)
Q Consensus 283 AvvL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~~ 353 (445)
++||++.+.|++.+.++++++.+++... ..|..++.++..+++++|+++|++++||||||+|++++.. +..
T Consensus 245 avvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~gD~~E~~ 324 (416)
T 2wge_A 245 LMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEAN 324 (416)
T ss_dssp EEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHH
T ss_pred EEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEECCCCCcCCCHHHHH
Confidence 9999999999999999999999887764 3455667788899999999999999999999999998875 455
Q ss_pred HHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 354 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 354 ~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.++.++. .+++.+..+..+||++|++|+.++++++.+|+++
T Consensus 325 al~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~ 365 (416)
T 2wge_A 325 AIRVAGC--DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDG 365 (416)
T ss_dssp HHHHTTC--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHhcc--CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcC
Confidence 5566643 3677788888999999999999999999999874
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.5e-24 Score=218.71 Aligned_cols=248 Identities=16% Similarity=0.200 Sum_probs=175.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCC-C----cEEEEeccCCCc-------------------------ccchHHHHHHHHc
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEV-G----DIVVGTVLAPGS-------------------------QRASECRMAAFYA 123 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dI-d----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~l 123 (445)
+..+|+.+|+++||+++|+++++| | .|++|+...... .....+..++..+
T Consensus 101 ~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 180 (451)
T 4ddo_A 101 RFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKH 180 (451)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHh
Confidence 356799999999999999999999 7 688887643210 0123456677899
Q ss_pred CCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHH
Q 013344 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202 (445)
Q Consensus 124 Gl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~ 202 (445)
|+ +.|+++|+++|+|+++||..|+++|++|++|++.... .. . .+...+..+..
T Consensus 181 gl--~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~---------~---------------~~~~~~~~~~~ 234 (451)
T 4ddo_A 181 RF--RGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEA---------A---------------FDKVSLGGFAA 234 (451)
T ss_dssp TC--CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEC---------C---------------CSHHHHHHHHH
T ss_pred cC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEecccc---------c---------------cCHHHHHHHHH
Confidence 99 4699999999999999999999999999999981100 00 0 00000011110
Q ss_pred HHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCe
Q 013344 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAG 282 (445)
Q Consensus 203 ~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAa 282 (445)
.+.+ +.+ .+.+.....+| |+. ..+++.++|||+
T Consensus 235 -----------~~~l------------------------s~~------~~~~~~~~~~p-fd~-----~~~g~v~gdGAa 267 (451)
T 4ddo_A 235 -----------ARAL------------------------STG------FSEEPVRASRP-FDR-----DRDGFVMGEGAA 267 (451)
T ss_dssp -----------TTCB------------------------CCS------CTTSGGGSCCT-TBT-----TCCSBCBBCEEE
T ss_pred -----------Hhhh------------------------ccC------CCcCccccccc-ccc-----CCCCcEEeceEE
Confidence 0000 000 00111112344 332 234556899999
Q ss_pred eEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCC------CccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----H
Q 013344 283 AVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM------GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----V 352 (445)
Q Consensus 283 AvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~------~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~ 352 (445)
++||++.+.|++++.++++++.+++... ++..+ +.+...+++++|+++|++++||||+++|.+++... .
T Consensus 268 avvL~~~~~A~~~g~~i~a~i~g~~~~~-d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~d~~E~ 346 (451)
T 4ddo_A 268 MVVVESLDHALARGARPIAEIIGYGTTA-DAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEI 346 (451)
T ss_dssp EEEEEEHHHHHHTTCCCSEEEEEEEEEE-CCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHH
T ss_pred EEEEeeHHHHHhCCCceEEEEEEEEEec-CCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCcCcccCHHHH
Confidence 9999999999999999999999988765 33322 23457899999999999999999999999998742 2
Q ss_pred -HHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 353 -YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 353 -~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.+.++. ..+++.++.+..+||++|++|+++++.++.+|+++
T Consensus 347 ~al~~~~~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~ 390 (451)
T 4ddo_A 347 EALKTVFGV-GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDG 390 (451)
T ss_dssp HHHHHHHCS-SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCC-CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcC
Confidence 23334555 44667777778899999999999999999999875
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-23 Score=216.72 Aligned_cols=245 Identities=16% Similarity=0.163 Sum_probs=177.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-------------------------ccchHHHHHHHHcC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~lG 124 (445)
+..+|+.+|+++||+++|+++++|| .|++|+..+++. ....++..++..+|
T Consensus 91 ~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 170 (428)
T 3mqd_A 91 RGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFK 170 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcC
Confidence 3568999999999999999999998 688988755421 01235677888999
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc--cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP--KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~--~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~ 202 (445)
+ +.|+++|+++|+|+++||..|+++|++|++|++...- .+.. ...-.+
T Consensus 171 l--~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~--------------------------~~~~~~-- 220 (428)
T 3mqd_A 171 I--KGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDW--------------------------TLSVLF-- 220 (428)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH--------------------------HHHHHH--
T ss_pred C--CCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccch--------------------------HHHHHH--
Confidence 9 4799999999999999999999999999999981100 0000 000000
Q ss_pred HHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCe
Q 013344 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAG 282 (445)
Q Consensus 203 ~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAa 282 (445)
. ..+. +..+... + .-...+| |+. ..+...++|||+
T Consensus 221 ---~------~~~~------------------------ls~~~~~----~--p~~~~rp-fd~-----~~~G~v~gEGAa 255 (428)
T 3mqd_A 221 ---D------AMGA------------------------MSSKYND----T--PSTASRA-YDK-----NRDGFVIAGGAG 255 (428)
T ss_dssp ---H------HTTC------------------------BCCTTTT----S--GGGSCCT-TBT-----TCCSBCBBCEEE
T ss_pred ---H------Hhhh------------------------hcccccC----C--cccccCc-ccC-----CCCCcccccceE
Confidence 0 0000 0000000 0 0011344 332 234445899999
Q ss_pred eEEeeCHHHHHhcCCCeeEEEEEeEEeecCCC---CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-----HHH
Q 013344 283 AVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA---IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-----VYC 354 (445)
Q Consensus 283 AvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~---~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~-----~~~ 354 (445)
++||++.+.|++.+.++++++.+++....... .++.++..+++++|+ |++ +||||+|.|.+++... ..+
T Consensus 256 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~-~dId~ve~HgtgT~~~D~~E~~al 332 (428)
T 3mqd_A 256 VLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVT-SKIDYINPHATSTPAGDAPEIEAI 332 (428)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCC-SCCCEEECCCCSCHHHHHHHHHHH
T ss_pred EEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCc-cccCEEEEeCCCCCCcCHHHHHHH
Confidence 99999999999999999999999988762221 256778899999999 999 9999999999988642 234
Q ss_pred HHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 355 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 355 ~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.++...+.++.+..+..+||+.|++|+++++.++.+|+++
T Consensus 333 ~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~ 374 (428)
T 3mqd_A 333 RQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNN 374 (428)
T ss_dssp HHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhC
Confidence 455675555577778888899999999999999999999864
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=218.72 Aligned_cols=247 Identities=16% Similarity=0.158 Sum_probs=175.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~I 152 (445)
+..+|+.+|+++||+++|+++++||.|+++++++ .. .+..+..++..||++..++ +++++.+|+|+++||..|..+|
T Consensus 101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~-~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i 178 (393)
T 3ov2_A 101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-ID-MPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLA 178 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CC-BSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CC-CCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999988 43 5677888888999975454 8999999999999999999999
Q ss_pred HcCCCCeEe-----cCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 153 KAGFYDIGS-----VNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 153 ~sG~~~~v~-----~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
++|.++++. ..+ .+.++.
T Consensus 179 ~sg~~~~vLvvg~E~~s~~~~~~~-------------------------------------------------------- 202 (393)
T 3ov2_A 179 ENNRGARVLVVACEITVLSFRGPN-------------------------------------------------------- 202 (393)
T ss_dssp HHSTTCEEEEEEEECGGGTCCCCC--------------------------------------------------------
T ss_pred HcCCCCEEEEEEEeccchhccCCc--------------------------------------------------------
Confidence 999988771 110 110000
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEe
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTF 306 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~ 306 (445)
+ -+.+.+ ..+..++|||+|+||...+.. .. ..+.-++...
T Consensus 203 ------------------d-----~~~~~~---------------~~~~lFGDGAaA~vl~~~~~~-~~-~~~~~~~~~~ 242 (393)
T 3ov2_A 203 ------------------E-----GDFEAL---------------AGQAGFGDGAGAVVVGADPLE-GI-EKPIYEIAAA 242 (393)
T ss_dssp ------------------T-----TCHHHH---------------HHHHHBCCEEEEEEEESSCCT-TT-CCCSEEEEEE
T ss_pred ------------------c-----cchhhh---------------cccccccCccEEEEEEecCCC-cc-cCceeEEEec
Confidence 0 000100 112237899999999865421 10 1111223322
Q ss_pred EEeecCCCC---------------CCc--------cHHHHHHHHHHHcCCCC-CCccEEEecCCChHHHHHHHHHcCCCC
Q 013344 307 AAVGVDPAI---------------MGV--------GPAVAIPAAVKSAGLQL-DDIDLFEINEAFASQFVYCRNKLGLDP 362 (445)
Q Consensus 307 ~~~~~~p~~---------------~~~--------~~~~ai~~aL~~aGl~~-~DID~~e~h~~~~~~~~~~~e~LGl~~ 362 (445)
+....+... |+. ....+++++|+++|+++ +|| +|.+||++..+...+.++||+++
T Consensus 243 ~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq~n~~i~~~v~~~Lgl~~ 321 (393)
T 3ov2_A 243 MQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV-FWVAHPGNWAIIDAIEAKLQLSP 321 (393)
T ss_dssp EEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-EEEECCCCHHHHHHHHHHHTCCT
T ss_pred CcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCc-EEEECCCChHHHHHHHHHcCCCH
Confidence 211111100 111 11368999999999997 888 99999999999999999999999
Q ss_pred CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc----CCCCcee---e-EEEe-ecccceeEEEEEEcc
Q 013344 363 EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR----GRDCRFG---V-ISMC-IGTGMGAAAVFERGD 423 (445)
Q Consensus 363 ~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~----~~~~~~G---~-~~~~-~G~G~~~a~~l~~~~ 423 (445)
+++..+.-. .+.+|||++++++.+|+++.++ +.. +.| . ++++ +|+|++|+++++++-
T Consensus 322 ek~~~s~~~---l~~~GNtssAsip~~L~~~~~~~~~~g~~-~~G~~~d~vll~~fG~G~t~~~~ll~~~ 387 (393)
T 3ov2_A 322 DKLSTARHV---FTEYGNMQSATVYFVMDELRKRSAVEGRS-TTGDGLQWGVLLGFGPGLSIETVVLRSM 387 (393)
T ss_dssp TTTHHHHHH---HHHHCBCGGGHHHHHHHHHHHHHHHTTCS-BTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHHHH---HHHhCChHHhHHHHHHHHHHHhhhhcCCc-CCCCCCCeEEEEEECccceeeeeeeEEc
Confidence 998765111 1789999999999999998864 443 555 3 3333 999999988888764
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=220.50 Aligned_cols=243 Identities=16% Similarity=0.105 Sum_probs=167.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~I 152 (445)
+..+|+.+|+++||+++|++++|||.|+++++++ .. .+..+..++..||++..++ +++++.+|+|+++||..|..+|
T Consensus 95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~-~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i 172 (387)
T 3oit_A 95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AH-VPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLA 172 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CE-ESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CC-cccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999988 43 5667888888999975453 8999999999999999999999
Q ss_pred HcCCCCeEe-----cCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 153 KAGFYDIGS-----VNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 153 ~sG~~~~v~-----~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
++|.++++. ..+ .+.++
T Consensus 173 ~sg~~~~vLvvg~E~~s~~~~~~--------------------------------------------------------- 195 (387)
T 3oit_A 173 ENSRGARVLVVAAELTLMYFTGP--------------------------------------------------------- 195 (387)
T ss_dssp HSSTTCEEEEEEEECGGGTCCCC---------------------------------------------------------
T ss_pred hcCCCCEEEEEEEeccchhccCc---------------------------------------------------------
Confidence 999988771 110 00000
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEe
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTF 306 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~ 306 (445)
++ -+.+. ...+..++|||+|+||...+. . ...+..++.+.
T Consensus 196 -----------------~d-----~~~~~---------------~~~~~lFGDGAaA~vl~~~~~--~-~~~~~~~~~~~ 235 (387)
T 3oit_A 196 -----------------DE-----GCFRT---------------LLVQGLFGDGAAAVIVGADAD--D-VERPLFEIVSA 235 (387)
T ss_dssp -----------------CS-----SSCHH---------------HHHHHHBCCEEEEEEEESSCC--S-SCCCCEEEEEE
T ss_pred -----------------cc-----cchHh---------------hhcccccccceEEEEEecCCC--c-ccCCceEEEec
Confidence 00 00000 011233799999999987541 1 11122244433
Q ss_pred EEeecCCCC---------------CCc--------cHHHHHHHHHHHc----CCCCCCcc--EEEecCCChHHHHHHHHH
Q 013344 307 AAVGVDPAI---------------MGV--------GPAVAIPAAVKSA----GLQLDDID--LFEINEAFASQFVYCRNK 357 (445)
Q Consensus 307 ~~~~~~p~~---------------~~~--------~~~~ai~~aL~~a----Gl~~~DID--~~e~h~~~~~~~~~~~e~ 357 (445)
.....+... +.. ....+++++|+++ |++ |+| +|.+||++..+...+.++
T Consensus 236 ~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~v~Hq~n~~il~~v~~~ 313 (387)
T 3oit_A 236 AQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGG--GWNDLFWAVHPGSSTIMDQVDAA 313 (387)
T ss_dssp EEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC--------GGGSEEEECCCCHHHHHHHHHH
T ss_pred ccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCC--cccccEEEECCCCHHHHHHHHHH
Confidence 322111100 000 1135778888898 988 666 999999999999999999
Q ss_pred cCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCcee------e-EEEe-ecccceeEEEEEEc
Q 013344 358 LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG------V-ISMC-IGTGMGAAAVFERG 422 (445)
Q Consensus 358 LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G------~-~~~~-~G~G~~~a~~l~~~ 422 (445)
||++++++..+--.+ +.+|||++++++.+|++++++. . +.| . .+++ +|+|++|++++++.
T Consensus 314 Lgl~~ek~~~s~~~l---~~~GNtssAsip~~L~~~~~~~-~-~~G~~g~~~d~vll~~fG~G~t~~~~ll~~ 381 (387)
T 3oit_A 314 LGLEPGKLAASRRVL---SDYGNMSGATVIFALDELRRQR-K-EAAAAGEWPELGVMMAFGPGMTVDAMLLHA 381 (387)
T ss_dssp HTCCTTTTHHHHHHH---HHHCBCGGGHHHHHHHHHHHC------------CCEEEEEEEETTTEEEEEEEEE
T ss_pred cCCCHHHHHHHHHHH---HHhCchHHhHHHHHHHHHHHhh-h-ccCCCCCCCCEEEEEEecccceeeeeeeEe
Confidence 999999987651111 7899999999999999987652 2 444 2 3333 99999998877765
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-23 Score=213.35 Aligned_cols=246 Identities=14% Similarity=0.138 Sum_probs=172.7
Q ss_pred CHHHHHHHHHHHHHHHcCC-CCCCCC----cEEEEeccCCCc-------------------------ccchHHHHHHHHc
Q 013344 74 YPDDLLAPVLKAVIEKTNV-DPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYA 123 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi-~~~dId----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~l 123 (445)
...+|+.+|+++||+++|+ ++++|| .+++|+...... ....++..++..+
T Consensus 76 ~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (412)
T 4ewg_A 76 RVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFW 155 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHh
Confidence 3567999999999999999 888888 888887653210 0124567788899
Q ss_pred CCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHH
Q 013344 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVD 203 (445)
Q Consensus 124 Gl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~ 203 (445)
|+ +.|+++|+++|+|+++||..|+++|++|++|++..... +. +++.....
T Consensus 156 gl--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~--------e~----------------~s~~~~~~---- 205 (412)
T 4ewg_A 156 DL--KGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGA--------EE----------------LSGPAVAV---- 205 (412)
T ss_dssp TC--CSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEE--------EC----------------CCHHHHHH----
T ss_pred CC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecc--------cc----------------CCHHHHHH----
Confidence 99 46999999999999999999999999999999811000 00 00000000
Q ss_pred HHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCee
Q 013344 204 SHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283 (445)
Q Consensus 204 s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaA 283 (445)
+.+ .+.+.. ...+++. ..+| |+. ..++..++|||++
T Consensus 206 -~~~------~~~l~~-------------------~~~~p~~------------~~rp-fd~-----~~~G~~~geGAaa 241 (412)
T 4ewg_A 206 -FDT------LYATST-------------------RNDEPHL------------TPRP-FDA-----KRDGLVVGEGAAT 241 (412)
T ss_dssp -HHT------TTCBCC-------------------CTTCGGG------------CCCT-TBT-----TCCCBCBBCEEEE
T ss_pred -HHH------hhcccc-------------------CCCCCCC------------CCCC-CCC-----CCCCCceECeEEE
Confidence 000 000000 0000111 1333 332 2355668999999
Q ss_pred EEeeCHHHHHhcCCCeeEEEEEeEEeecCCC---CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----HHHH-
Q 013344 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPA---IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----VYCR- 355 (445)
Q Consensus 284 vvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~---~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~~~~- 355 (445)
+||++.+.|++.+.++++++.+++....... ..+.++..+++++|+++|++++||||+|+|..++... ...+
T Consensus 242 vvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~ 321 (412)
T 4ewg_A 242 LVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATA 321 (412)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHHHHHH
T ss_pred EEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHHHHHHH
Confidence 9999999999999999999999887653211 1345677999999999999999999999999988743 2222
Q ss_pred HHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 356 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 356 e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+.++ ++++.+..+..+||+.|++|+++++.++.+|+++
T Consensus 322 ~~~~---~~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~ 359 (412)
T 4ewg_A 322 RTFG---ERMPISSLKSYVGHTLGACGALEAWWTIEMMKRN 359 (412)
T ss_dssp HHHC---TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHcC---CCCeeeCccccccccHHHHHHHHHHHHHHHHhcC
Confidence 3333 2355555566679999999999999999999874
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=216.28 Aligned_cols=251 Identities=15% Similarity=0.166 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEe-cCcCcHHHHHHHHHHHHHHc
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAIKA 154 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v-~~~CsSgl~Al~~A~~~I~s 154 (445)
.+|+.+|+++||+++|++|+|||.||+++++ +.. .+..+..++..||++....+++| +.+|+++++||..|.++|++
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~-~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a 188 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSA-NPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLG 188 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCC-SSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCC-CCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Confidence 5999999999999999999999999999988 443 45678888889999754448999 79999999999999999997
Q ss_pred ----CCCCeE-----ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccce
Q 013344 155 ----GFYDIG-----SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 225 (445)
Q Consensus 155 ----G~~~~v-----~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~ 225 (445)
|.++++ +..+.+.++.. +... .+
T Consensus 189 ~~~~G~~~~vLVvg~E~~S~~~~~~~--------------------------~~~~---------~~------------- 220 (465)
T 3e1h_A 189 HTARGKPARILVLALEVSTTMVRSEL--------------------------ESID---------AL------------- 220 (465)
T ss_dssp HHHTTCCCEEEEEEEECCGGGHHHHH--------------------------HHHH---------HH-------------
T ss_pred ccccCCCCEEEEEEEeecchhcCccc--------------------------cccc---------cc-------------
Confidence 988887 22222221100 0000 00
Q ss_pred ecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEE
Q 013344 226 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRT 305 (445)
Q Consensus 226 ~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~ 305 (445)
.++ ...+..++|||+|+||...+... .......++.+
T Consensus 221 -----------------~~d-------------------------~~t~~LFGDGAaAvVl~~~~~~~-~~~~~~~~l~~ 257 (465)
T 3e1h_A 221 -----------------QET-------------------------RIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLG 257 (465)
T ss_dssp -----------------TCC-------------------------CCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEE
T ss_pred -----------------ccc-------------------------cccccccccceeEEEEEccCCCc-cccccceeecc
Confidence 000 01122379999999998753210 00112223443
Q ss_pred eEEeecCCC--C-------------CCc--------cHHHHHHHHHHH-------cCCCCCCccEEEecCCChHHHHHHH
Q 013344 306 FAAVGVDPA--I-------------MGV--------GPAVAIPAAVKS-------AGLQLDDIDLFEINEAFASQFVYCR 355 (445)
Q Consensus 306 ~~~~~~~p~--~-------------~~~--------~~~~ai~~aL~~-------aGl~~~DID~~e~h~~~~~~~~~~~ 355 (445)
+.....+.. . .+. ....+++++|++ +|++++|||+| +||++..+...+.
T Consensus 258 ~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DId~~-~Hqan~rIl~~v~ 336 (465)
T 3e1h_A 258 WENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA-MHPGGATILSGAE 336 (465)
T ss_dssp EEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-ECCSSHHHHHHHH
T ss_pred ceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHceEE-ecCCChHHHHHHH
Confidence 332211110 0 010 123678888887 67999999988 9999999999999
Q ss_pred HHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc--CCCCcee----e-EEEe-ecccceeEEEEEEccc
Q 013344 356 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR--GRDCRFG----V-ISMC-IGTGMGAAAVFERGDC 424 (445)
Q Consensus 356 e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~--~~~~~~G----~-~~~~-~G~G~~~a~~l~~~~~ 424 (445)
++|||+++++..+.-.+ +.+|||++++++.+|+++.++ +.. +.| . ++++ ||+|++|+++++++..
T Consensus 337 ~~Lgl~~ek~~~s~~~l---~~yGNtsSASip~aL~~~~~~~~g~l-~~Gg~~~d~vll~gfG~Glt~~~~llr~~~ 409 (465)
T 3e1h_A 337 SAMGLTPEHMRASYDRY---INHGNSSSATIFSVLNRLREKDMDAL-APGGKVKEYVVGCAFGPGINVEMCMLKRRM 409 (465)
T ss_dssp HHHTCCGGGGHHHHHHH---HHHCBCGGGHHHHHHHHHTSTTTTSC-SSSSCCCSEEEEEEEETTTEEEEEEEEECC
T ss_pred HHhCcCHHHhHHHHHHH---hcceechHhHHHHHHHHHHHhccccc-CCCCCCCCEEEEEEEhHHHhhhheeeEEec
Confidence 99999999986543111 567999999999999999876 332 333 3 3333 9999999999998855
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-24 Score=216.76 Aligned_cols=254 Identities=11% Similarity=0.064 Sum_probs=183.0
Q ss_pred EEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCce
Q 013344 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (445)
Q Consensus 52 v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~ 131 (445)
.||. .+|+|.+|+. .+. .+..+|+.+|+++||+++|++++|||.|+++++++.. .+..+..++..+|++.+++.
T Consensus 118 e~i~--~rtgi~~R~~-~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~--~P~~a~~v~~~LGl~~~~~~ 191 (413)
T 3v7i_A 118 KAVP--ASQTVQERTA-PAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPA--LPGLDVALANRLPLRGDTML 191 (413)
T ss_dssp HTSC--CCCCHHHHHH-HHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCC--SSCHHHHHHHHTTCCTTCEE
T ss_pred ccee--cCCCHHHhCc-ccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCC--cCHHHHHHHHHhCCCCCceE
Confidence 3554 6999987642 333 4688999999999999999999999999999998743 46678888899999866889
Q ss_pred EEe-cCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 132 RTV-NRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 132 ~~v-~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
+++ +.+|+||++||..|+.+|++|.++++ +..+...++
T Consensus 192 ~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~~~------------------------------------ 235 (413)
T 3v7i_A 192 LPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTYQP------------------------------------ 235 (413)
T ss_dssp EEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGCCS------------------------------------
T ss_pred EEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccccCc------------------------------------
Confidence 999 99999999999999999999998877 111111000
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEE
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvv 285 (445)
++ -+.+.+ -.+..++|||+|+|
T Consensus 236 --------------------------------------~d-----~~~~~l---------------v~~~LFGDGAaAvv 257 (413)
T 3v7i_A 236 --------------------------------------AD-----DTLESL---------------IVRLLFADTAVAAV 257 (413)
T ss_dssp --------------------------------------SC-----CSTTHH---------------HHHHHBCCEEEEEE
T ss_pred --------------------------------------cc-----cchhhh---------------hcceeeccccEEEE
Confidence 00 000000 01223799999999
Q ss_pred eeCHHHHHhcCCCeeEEEEEeEEeecCCC--C-------------C-Ccc------HHHHHHHHHH------HcCCCCCC
Q 013344 286 LMKRSVAMRKGLPILGVFRTFAAVGVDPA--I-------------M-GVG------PAVAIPAAVK------SAGLQLDD 337 (445)
Q Consensus 286 L~s~~~a~~~g~~~~~~i~~~~~~~~~p~--~-------------~-~~~------~~~ai~~aL~------~aGl~~~D 337 (445)
|...+.. .+.-++.+......+.. . | +.. ...+++++|+ ++|++
T Consensus 258 l~~~~~~-----~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~~~~~~gl~--- 329 (413)
T 3v7i_A 258 VTGRPRP-----ESVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYEDDPSSWH--- 329 (413)
T ss_dssp EESSCCT-----TEEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTSSSCTTCC---
T ss_pred EEecCCC-----CCCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhccccccCCCc---
Confidence 9875421 11112222221111100 0 0 000 2367889999 89997
Q ss_pred ccEEEecCCChHHHHHHHHHcC--CCCCCc---CCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEE-Ee-ec
Q 013344 338 IDLFEINEAFASQFVYCRNKLG--LDPEKI---NVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS-MC-IG 410 (445)
Q Consensus 338 ID~~e~h~~~~~~~~~~~e~LG--l~~~~v---n~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~-~~-~G 410 (445)
||+|.+|+.+..+...+.++|| ++++++ ..+. + +||||+++++.+|+++.+ +.. +.|..+ ++ +|
T Consensus 330 id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~l------~-~GNtssAsi~~~L~~~~~-~~~-~~Gd~vll~~fG 400 (413)
T 3v7i_A 330 PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSY------T-SGNRGGAAVFDILRRAHD-AGQ-KTGSRAVLYAAA 400 (413)
T ss_dssp CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHHH------T-TCBCGGGHHHHHHHHHHH-HCC-CTTCEEEEEEEE
T ss_pred eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceEe------c-eeChHHHHHHHHHHHHHh-CCC-CCCCEEEEEEEC
Confidence 9999999999999999999999 999998 3344 8 999999999999999983 332 555533 33 99
Q ss_pred ccceeEEEEEEc
Q 013344 411 TGMGAAAVFERG 422 (445)
Q Consensus 411 ~G~~~a~~l~~~ 422 (445)
+|+++++++++|
T Consensus 401 ~Glt~~~~ll~w 412 (413)
T 3v7i_A 401 PGLTATALEGEW 412 (413)
T ss_dssp TTTEEEEEEEEE
T ss_pred HHHhHhhhheEe
Confidence 999999998876
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=99.90 E-value=5e-22 Score=202.82 Aligned_cols=245 Identities=13% Similarity=0.162 Sum_probs=170.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCc-----EEEEeccCCCc------------c--------------cchHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGD-----IVVGTVLAPGS------------Q--------------RASECRMAAFY 122 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~-----vi~g~~~~~~~------------~--------------~~~~a~~~~~~ 122 (445)
...+|+.+++++||+++|+++++||. |++|+..++.. . ...++..++..
T Consensus 70 ~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (406)
T 2vba_A 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHh
Confidence 35789999999999999999988886 99998866530 0 12356677778
Q ss_pred cCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHH
Q 013344 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 201 (445)
Q Consensus 123 lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a 201 (445)
+|+ +.|+++|+++|+|++.||..|+++|++|++|++.... ... . ....
T Consensus 150 lgl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~---------~--------------------~~~~ 198 (406)
T 2vba_A 150 FKI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEEL---------C--------------------WEMA 198 (406)
T ss_dssp TTC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC---------C--------------------HHHH
T ss_pred ccC--CCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccc---------c--------------------ChHH
Confidence 999 4799999999999999999999999999999981100 000 0 0000
Q ss_pred HHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCC
Q 013344 202 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 281 (445)
Q Consensus 202 ~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGA 281 (445)
.. +. ..+.+..+ ++ -+++. ..+| |+. ..+...++||+
T Consensus 199 ~~-~~------~~~~ls~~--------~~----------~~p~~------------~~~p-fd~-----~~~G~v~gEGa 235 (406)
T 2vba_A 199 CE-FD------AMGALSTK--------YN----------DTPEK------------ASRT-YDA-----HRDGFVIAGGG 235 (406)
T ss_dssp HH-HH------HTTCBCCS--------CT----------TSGGG------------SCCT-TBT-----TCCSBCBBCEE
T ss_pred HH-Hh------hccccccc--------cC----------CCCcc------------ccCc-CcC-----CCCceEeeceE
Confidence 00 00 00111000 00 00011 1333 332 23445589999
Q ss_pred eeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCC---CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-----HH
Q 013344 282 GAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA---IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-----VY 353 (445)
Q Consensus 282 aAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~---~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~-----~~ 353 (445)
+++||++.+.|++.+.++++++.+++....... ..+.++..+++++|+++| +||||+|.|++++... ..
T Consensus 236 aavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~al~~ag---~dId~ve~HgtgT~~gD~~E~~a 312 (406)
T 2vba_A 236 GMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGTSTPVGDVKELAA 312 (406)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTCC---SCCCEEECCCCSCHHHHHHHHHH
T ss_pred EEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhCC---CCccEEEeeCccCcccCHHHHHH
Confidence 999999999999999999999999887653211 115567899999999999 9999999999998752 22
Q ss_pred HHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 354 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 354 ~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
+.+.+|... ++.++-+-.+||+.|++|+.+++.++.+|+++.
T Consensus 313 l~~~fg~~~--~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ 354 (406)
T 2vba_A 313 IREVFGDKS--PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGF 354 (406)
T ss_dssp HHHHHTTCC--CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHHHhCcCC--CceeCchhhhcccHHHHHHHHHHHHHHHHhcCc
Confidence 334455433 333333445899999999999999999999753
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-23 Score=210.96 Aligned_cols=252 Identities=12% Similarity=0.087 Sum_probs=174.2
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~ 151 (445)
++..+|+.+|+++||+++|+++++||.|+++++++.. .+..+..++..+|++..++ +++++.+|+|++.||..|.++
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~ 173 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVD--MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDI 173 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCE--ESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCC--CCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988632 4567888889999975554 899999999999999999999
Q ss_pred HHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCC
Q 013344 152 IKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDP 231 (445)
Q Consensus 152 I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~ 231 (445)
|++|.++++.+
T Consensus 174 i~~g~~~~vLv--------------------------------------------------------------------- 184 (387)
T 3a5r_A 174 AENNKGARVLI--------------------------------------------------------------------- 184 (387)
T ss_dssp HHHSTTCEEEE---------------------------------------------------------------------
T ss_pred HHhCCCCEEEE---------------------------------------------------------------------
Confidence 99999887711
Q ss_pred CCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcC-CCeeEEEEEeEEee
Q 013344 232 KTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG-LPILGVFRTFAAVG 310 (445)
Q Consensus 232 ~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g-~~~~~~i~~~~~~~ 310 (445)
+..|...+ .+ ..| ++. ..-....+..++|||+|+||.+.+.. + ..+..++.+.....
T Consensus 185 ---------vg~e~~s~-~~-------~~~-~d~-~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~ 242 (387)
T 3a5r_A 185 ---------VCSEMTTT-CF-------RGP-SET-HLDSMIGQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTI 242 (387)
T ss_dssp ---------EEEECCTT-TC-------CCC-CSS-CCSSTTHHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEE
T ss_pred ---------EEEeccch-hh-------cCC-Ccc-chhhccccceeccceeEEEEecCCCc---cccCCceEEEeeeEEE
Confidence 00000000 00 000 000 00001122347999999999865421 2 11112333332221
Q ss_pred cCCC--C-------------CCc--------cHHHHHHHHHHHcCCC-CCCccEEEecCCChHHHHHHHHHcCCCCCCcC
Q 013344 311 VDPA--I-------------MGV--------GPAVAIPAAVKSAGLQ-LDDIDLFEINEAFASQFVYCRNKLGLDPEKIN 366 (445)
Q Consensus 311 ~~p~--~-------------~~~--------~~~~ai~~aL~~aGl~-~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn 366 (445)
.+.. . ++. ....+++++|+++|++ ++|| +|.+|+++..+...+.+.||++++++.
T Consensus 243 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl~~ek~~ 321 (387)
T 3a5r_A 243 VPESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPAILDQVTAKVGLEKEKLK 321 (387)
T ss_dssp CTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHHHHHHHHTCCGGGGH
T ss_pred eCCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHHHHHHHHHHcCCChHHhH
Confidence 1110 0 111 1236788999999998 8899 899999999999999999999999886
Q ss_pred CCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCcee--------eE-EEe-ecccceeEEEEEEcc
Q 013344 367 VNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG--------VI-SMC-IGTGMGAAAVFERGD 423 (445)
Q Consensus 367 ~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G--------~~-~~~-~G~G~~~a~~l~~~~ 423 (445)
.+-- .-+.+|||++++++.+|+++.+++. +.| +. .++ +|+|++++++++++.
T Consensus 322 ~s~~---~l~~~GNtssAsi~~~L~~~~~~g~--~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~ 383 (387)
T 3a5r_A 322 VTRQ---VLKDYGNMSSATVFFIMDEMRKKSL--ENGQATTGEGLEWGVLFGFGPGITVETVVLRSV 383 (387)
T ss_dssp HHHH---HHHHHCBCGGGHHHHHHHHHHHHHH--HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHH---HHHhcCCcchhHHHHHHHHHHHhcc--ccCCCCCCCCcceEEEEEecCcceeeehhheec
Confidence 5310 0177999999999999999876542 223 33 333 899999988887764
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.9e-22 Score=218.89 Aligned_cols=244 Identities=21% Similarity=0.262 Sum_probs=180.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeccCCCcc-----------------cchHHHHHHHHcCCCCCCceE
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ-----------------RASECRMAAFYAGFPETVPVR 132 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~----vi~g~~~~~~~~-----------------~~~~a~~~~~~lGl~~~~~~~ 132 (445)
+..+|+.+++++||+++|+++++||. |++|+..+++.. ....+..++..+|+ +.|++
T Consensus 94 p~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~ 171 (915)
T 2qo3_A 94 PQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGL--EGPSI 171 (915)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTB--CSCEE
T ss_pred HHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCC--CCCEE
Confidence 34689999999999999999999995 899988766531 11356677889999 46999
Q ss_pred EecCcCcHHHHHHHHHHHHHHcCCCCeEecC-ccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Q 013344 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGSVN-PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 211 (445)
Q Consensus 133 ~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~-~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a 211 (445)
+|+++|+|++.||.+|+++|++|++|++... ..... .|.. + ..+.
T Consensus 172 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~--------~p~~---------~-------~~~~---------- 217 (915)
T 2qo3_A 172 SVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMA--------TPGV---------F-------VDFS---------- 217 (915)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCS--------STHH---------H-------HHHH----------
T ss_pred EECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhc--------CHHH---------H-------HHHh----------
Confidence 9999999999999999999999999988110 00000 0000 0 0000
Q ss_pred HHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHH
Q 013344 212 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 291 (445)
Q Consensus 212 ~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~ 291 (445)
..+ .+++|.. .+| |+. ..++..++||++++||.+.+.
T Consensus 218 -~~~------------------------~ls~~g~------------~~~-Fd~-----~adG~v~gEGagavVL~~~~~ 254 (915)
T 2qo3_A 218 -RQR------------------------ALAADGR------------SKA-FGA-----GADGFGFSEGVTLVLLERLSE 254 (915)
T ss_dssp -TTT------------------------CBCSSCC------------CCT-TBT-----TCCCBCBBCEEEEEEEEEHHH
T ss_pred -hhc------------------------ccCCCCC------------ccc-ccC-----CCCceeecCceEEEEEeEhHH
Confidence 000 1222322 222 332 235556899999999999999
Q ss_pred HHhcCCCeeEEEEEeEEeecCCC-----CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH-----HHHHHHHcCCC
Q 013344 292 AMRKGLPILGVFRTFAAVGVDPA-----IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ-----FVYCRNKLGLD 361 (445)
Q Consensus 292 a~~~g~~~~~~i~~~~~~~~~p~-----~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~-----~~~~~e~LGl~ 361 (445)
|++.+.++++.+.+++....... ..+.+...+++++|+++|++++||||+|+|++++.. ...+.+.++..
T Consensus 255 A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~f~~~ 334 (915)
T 2qo3_A 255 ARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRD 334 (915)
T ss_dssp HHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTTHHHHHHHHHHHTSSS
T ss_pred hhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccCCHHHHHHHHHHhccc
Confidence 99999999999999887642211 123456789999999999999999999999988754 23455667754
Q ss_pred ---CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 362 ---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 362 ---~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
..++|+++++..+||+.|++|++.++.++.+|+++
T Consensus 335 ~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~ 372 (915)
T 2qo3_A 335 RDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNG 372 (915)
T ss_dssp CCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred cCCCCcccccCcccceeCCccccchHHHHHHHHHHhcC
Confidence 35788999999999999999999999999999874
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=229.41 Aligned_cols=253 Identities=13% Similarity=0.098 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC-CceEEecCcCcHHHHHHHHHHHHHH
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET-VPVRTVNRQCSSGLQAVADVAAAIK 153 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~-~~~~~v~~~CsSgl~Al~~A~~~I~ 153 (445)
..+|+.+|+++||+++|+++++||.|+++++.+.. .+..+..++..+|++.. +++++++.+|+|+++||..|.++|+
T Consensus 689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~ 766 (979)
T 3tsy_A 689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVE--MPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAE 766 (979)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCC--CCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHH
Confidence 56699999999999999999999999999965433 45677888889999632 4689999999999999999999999
Q ss_pred cCCCCeEec-CccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCC
Q 013344 154 AGFYDIGSV-NPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPK 232 (445)
Q Consensus 154 sG~~~~v~~-~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~ 232 (445)
+|.++++-+ ...... .
T Consensus 767 sG~~~~vLvvg~e~~~---------------------~------------------------------------------ 783 (979)
T 3tsy_A 767 NNAGARVLVVCSEITV---------------------V------------------------------------------ 783 (979)
T ss_dssp TSTTCEEEEEEEECTT---------------------T------------------------------------------
T ss_pred hCCCCEEEEEEEEecc---------------------h------------------------------------------
Confidence 999988711 000000 0
Q ss_pred CCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecC
Q 013344 233 TGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD 312 (445)
Q Consensus 233 ~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~ 312 (445)
+...+...+.+.+ .+++.++|||+|+||.+.+.+...+........++......
T Consensus 784 -----------~~~~~~~~~~~~~---------------~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (979)
T 3tsy_A 784 -----------TFRGPSEDALDSL---------------VGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNS 837 (979)
T ss_dssp -----------TCCCCCSSCHHHH---------------HHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTC
T ss_pred -----------heeCCCccCHHHH---------------hhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCc
Confidence 0000000011111 12334799999999998665433333333222233221111
Q ss_pred CCCC-----Cc----------------cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCC---
Q 013344 313 PAIM-----GV----------------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVN--- 368 (445)
Q Consensus 313 p~~~-----~~----------------~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~--- 368 (445)
...+ .. ....+++++|+++|++++|||+|++|+++..+...+.++||++++++..+
T Consensus 838 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~~~~~~lgl~~~k~~~~~~~ 917 (979)
T 3tsy_A 838 AGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVEAKLNLDKKKLEATRHV 917 (979)
T ss_dssp TTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHH
T ss_pred hhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCcccceEEECCCChHHHHHHHHHcCCChHHHHHHHHH
Confidence 1000 00 13579999999999999999999999999999999999999999998876
Q ss_pred CChhcccChhhhHHHHHHHHHHHHHHhcC--CC-Ccee----e-EEEeecccceeEEEEEEccc
Q 013344 369 GGALAIGHPLGTTGARCVATLLHEMKRRG--RD-CRFG----V-ISMCIGTGMGAAAVFERGDC 424 (445)
Q Consensus 369 gG~la~Gh~~GatG~~~i~~~l~~L~~~~--~~-~~~G----~-~~~~~G~G~~~a~~l~~~~~ 424 (445)
. +.+|||++++++.+|+++.++. +. .+.| . ....+|+|++|+++++++..
T Consensus 918 l------~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~~ 975 (979)
T 3tsy_A 918 L------SEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIP 975 (979)
T ss_dssp H------HHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECCB
T ss_pred H------HHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEEeCCchHHHHHHHHhcc
Confidence 5 8899999999999998876531 11 0111 1 33339999999999888753
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=206.21 Aligned_cols=242 Identities=13% Similarity=0.133 Sum_probs=172.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~I 152 (445)
+..+|+.+|+++||+++|+++++||.|+++++++.. .+..+..++..+|++..++ +++++.+|+|+++||..|.++|
T Consensus 124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i 201 (413)
T 1xes_A 124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPD--LPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLA 201 (413)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCE--ESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCc--cchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999988732 4567788888999975564 8999999999999999999999
Q ss_pred HcCCCCeE-----ecCcc-chhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 153 KAGFYDIG-----SVNPK-VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 153 ~sG~~~~v-----~~~~~-~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
++|.++++ +..+. +.++
T Consensus 202 ~~G~~~~vLvvg~E~~s~~~~~~--------------------------------------------------------- 224 (413)
T 1xes_A 202 ENNRGARVLVICSETTAVTFRGP--------------------------------------------------------- 224 (413)
T ss_dssp HTSTTCCEEEEEEECTTTTCCCC---------------------------------------------------------
T ss_pred HcCCCCEEEEEEehhhhhhhcCC---------------------------------------------------------
Confidence 99998776 11110 0000
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC-CeeEEEEE
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL-PILGVFRT 305 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~-~~~~~i~~ 305 (445)
++ -..+. ...+..++|||+|+||.+.+.. ++ ....++.+
T Consensus 225 -----------------~d-----~~~~~---------------~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~ 264 (413)
T 1xes_A 225 -----------------SE-----THLDS---------------LVGQALFGDGASALIVGADPIP---QVEKACFEIVW 264 (413)
T ss_dssp -----------------CT-----TCHHH---------------HHHHHHBCCEEEEEEEESSCCT---TTSCCSEEEEE
T ss_pred -----------------Cc-----cchhh---------------cccceeEecccEEEEEecCCCc---cccCCceEEEe
Confidence 00 00000 0112237899999999865421 21 11123333
Q ss_pred eEEeecCCC---------------CCC--------ccHHHHHHHHHHHcCCC-CCCccEEEecCCChHHHHHHHHHcCCC
Q 013344 306 FAAVGVDPA---------------IMG--------VGPAVAIPAAVKSAGLQ-LDDIDLFEINEAFASQFVYCRNKLGLD 361 (445)
Q Consensus 306 ~~~~~~~p~---------------~~~--------~~~~~ai~~aL~~aGl~-~~DID~~e~h~~~~~~~~~~~e~LGl~ 361 (445)
.+....+.. .++ .....+++++|+++|++ ++|| +|.+|+++..+...+.+.||++
T Consensus 265 ~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~Lgl~ 343 (413)
T 1xes_A 265 TAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKL-FWVVHPGGRAILDRVEAKLNLD 343 (413)
T ss_dssp EEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHHHHHHHTTCC
T ss_pred eeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCCHHHHHHHHHHcCCC
Confidence 332211110 011 11236888999999998 8888 8999999999999999999999
Q ss_pred CCCcCCC---CChhcccChhhhHHHHHHHHHHHHHHhcCCCCcee--------e-EEEe-ecccceeEEEEEEcc
Q 013344 362 PEKINVN---GGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG--------V-ISMC-IGTGMGAAAVFERGD 423 (445)
Q Consensus 362 ~~~vn~~---gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G--------~-~~~~-~G~G~~~a~~l~~~~ 423 (445)
++++..+ . +.+|||++++++.+|.++.+++. +.| + ++++ +|+|++|+++++++.
T Consensus 344 ~ek~~~s~~~l------~~~GNtssAsi~~~L~~~~~~g~--~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~ 410 (413)
T 1xes_A 344 PTKLIPTRHVM------SEYGNMSSACVHFILDQTRKASL--QNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSV 410 (413)
T ss_dssp TTTTHHHHHHH------HHHCBCGGGHHHHHHHHHHHHHH--HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred hHHhHHHHHHH------HhcCcCchhhHHHHHHHHHHhcc--ccCCCCCCCCcceEEEEEecCCcEEeEEEEEec
Confidence 9998653 3 77999999999999999876542 223 3 3333 999999988888764
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-21 Score=216.68 Aligned_cols=243 Identities=21% Similarity=0.298 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeccCCCcc------------------cchHHHHHHHHcCCCCCCceE
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ------------------RASECRMAAFYAGFPETVPVR 132 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~----vi~g~~~~~~~~------------------~~~~a~~~~~~lGl~~~~~~~ 132 (445)
...|+.+++++||+++|+++++||. |++|+..+++.. ....+..++..+|+ +.|++
T Consensus 116 ~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~ 193 (917)
T 2hg4_A 116 QQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGL--EGPAM 193 (917)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCC--CCCeE
Confidence 3579999999999999999999995 899988776531 01345677789999 46999
Q ss_pred EecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Q 013344 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 211 (445)
Q Consensus 133 ~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a 211 (445)
+|+++|+|++.||.+|++.|++|++|++.... .... .+ ..+.. +.
T Consensus 194 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~--------~p-------------------~~~~~--~~----- 239 (917)
T 2hg4_A 194 TVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMS--------SP-------------------GAFTE--FR----- 239 (917)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC--------ST-------------------HHHHH--HT-----
T ss_pred eecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEecccc--------Ch-------------------hhhHh--hh-----
Confidence 99999999999999999999999999981100 0000 00 00000 00
Q ss_pred HHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHH
Q 013344 212 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 291 (445)
Q Consensus 212 ~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~ 291 (445)
.. -.+++|.. .+| |+ +..|++.++||++++||.+.+.
T Consensus 240 -~~------------------------~~ls~~g~------------~~p-Fd-----~~adG~~~gEGagavVL~~l~~ 276 (917)
T 2hg4_A 240 -SQ------------------------GGLAADGR------------CKP-FS-----KAADGFGLAEGAGVLVLQRLSA 276 (917)
T ss_dssp -TS------------------------SCBCTTSC------------CCT-TB-----TTCCCBCBBCEEEEEEEEEHHH
T ss_pred -hc------------------------cCcCCccc------------cCc-cc-----ccccCCCCcceEEEEEEeeHHH
Confidence 00 01233322 333 33 2456777999999999999999
Q ss_pred HHhcCCCeeEEEEEeEEeecCCCC-----CCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-----HHHHHHcCCC
Q 013344 292 AMRKGLPILGVFRTFAAVGVDPAI-----MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-----VYCRNKLGLD 361 (445)
Q Consensus 292 a~~~g~~~~~~i~~~~~~~~~p~~-----~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~-----~~~~e~LGl~ 361 (445)
|++.+.++++.+.+++........ .+.+...+++++|+++|++++||||+|+|++++... ..+.+.+|..
T Consensus 277 A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~gD~~E~~al~~~fg~~ 356 (917)
T 2hg4_A 277 ARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAE 356 (917)
T ss_dssp HHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTHHHHHHHHHHTTTTTS
T ss_pred HHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccCcHHHHHHHHHHhccc
Confidence 999999999999999876543322 123456899999999999999999999999998642 2334445543
Q ss_pred ---CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 362 ---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 362 ---~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
..++++++++..+||+.|++|+..+++++.+|+++
T Consensus 357 ~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~ 394 (917)
T 2hg4_A 357 RDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHG 394 (917)
T ss_dssp SCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHT
T ss_pred cCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcC
Confidence 34688888999999999999999999999999874
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=9.3e-23 Score=207.51 Aligned_cols=264 Identities=13% Similarity=0.066 Sum_probs=184.0
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ...+++..+|+..|+++||++ ++|++||.|++|+.+++.. .+..+..++..+|++.++++++++++
T Consensus 35 ~~~Gi~~r~~-~~~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~a 110 (396)
T 1xpm_A 35 IGIGQTEMAV-SPVNQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDA-AKAAAVQIHNLLGIQPFARCFEMKEA 110 (396)
T ss_dssp TTTCCSEEEE-CCTTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEEST
T ss_pred hhcCceEEEe-CCCCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCceEEEeccc
Confidence 3667765443 335789999999999999988 7899999999999988764 55678888889999766999999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+||+.||..|.++|++|.++++.
T Consensus 111 C~sg~~Al~~A~~~I~sg~~~~vL-------------------------------------------------------- 134 (396)
T 1xpm_A 111 CYAATPAIQLAKDYLATRPNEKVL-------------------------------------------------------- 134 (396)
T ss_dssp TTTHHHHHHHHHHHHTTCTTCEEE--------------------------------------------------------
T ss_pred cHHHHHHHHHHHHHHHcCCCCEEE--------------------------------------------------------
Confidence 999999999999999999887651
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
++..|. .+ . .++. .++..++|||+|+||.+.+
T Consensus 135 ----------------------vvg~e~-s~--~----------~~~~------~~~~~~GdGA~A~vl~~~~------- 166 (396)
T 1xpm_A 135 ----------------------VIATDT-AR--Y----------GLNS------GGEPTQGAGAVAMVIAHNP------- 166 (396)
T ss_dssp ----------------------EEEEEE-EC--C----------CTTC------SSGGGCEEEEEEEEEEESC-------
T ss_pred ----------------------EEeehh-hc--c----------ccCC------CCCcccccceEEEEeccCC-------
Confidence 111110 00 0 0000 1223479999999998642
Q ss_pred CeeEEEEEeEEee------cCCCC------CCcc--------HHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHH
Q 013344 298 PILGVFRTFAAVG------VDPAI------MGVG--------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNK 357 (445)
Q Consensus 298 ~~~~~i~~~~~~~------~~p~~------~~~~--------~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~ 357 (445)
.++....+.+... ..|.. .+.. ...+++++|+++|++++|||+|.+|+++..+.....+.
T Consensus 167 ~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~~~~~~~~~ 246 (396)
T 1xpm_A 167 SILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKMGKKALES 246 (396)
T ss_dssp SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHT
T ss_pred ceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchHHHHHHHHH
Confidence 1222222222111 12211 1111 34789999999999999999999999999998888888
Q ss_pred c-----CCCCCCcCCCC-ChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEE-ccccccc
Q 013344 358 L-----GLDPEKINVNG-GALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFER-GDCADEL 428 (445)
Q Consensus 358 L-----Gl~~~~vn~~g-G~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~-~~~~~~~ 428 (445)
| +++++++..+. =.+.+.+.+||+++++++..|.++.+++.. +.|..+++ +|+|+++.+.+.+ .+.+++.
T Consensus 247 l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~~~l-~~Gd~ill~s~GsG~~~~~~~~~v~~~~~~~ 325 (396)
T 1xpm_A 247 IIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDL-QAGETIGLFSYGSGSVGEFYSATLVEGYKDH 325 (396)
T ss_dssp TGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHHSCC-CTTCEEEEEEEETTTEEEEEEEEECTTGGGG
T ss_pred HHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHcCCC-CCCCEEEEEEECcchhheEEEEEEcccHHHH
Confidence 8 77766542110 001223678999999999999998877654 56665444 7888887554444 4555544
Q ss_pred cc
Q 013344 429 CN 430 (445)
Q Consensus 429 ~~ 430 (445)
..
T Consensus 326 ~~ 327 (396)
T 1xpm_A 326 LD 327 (396)
T ss_dssp CC
T ss_pred hh
Confidence 33
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-22 Score=203.45 Aligned_cols=254 Identities=12% Similarity=0.035 Sum_probs=177.2
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcC
Q 013344 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (445)
Q Consensus 59 rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~C 138 (445)
+|++.+++. ...+++..+|+.+|+++||++++ |++||.|++++.+++.. .+..+..++..+|++.++++++++.+|
T Consensus 41 ~~Gi~~r~~-~~~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~-~ps~a~~v~~~LGl~~~~~~~dv~~aC 116 (388)
T 3v4n_A 41 GIGQDQMAV-NPISQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDE-SKAAAVVLHRLMGIQPFARSFEIKEAX 116 (388)
T ss_dssp TTCCCEEEC-CCTTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESGG
T ss_pred HhCceEEEE-CCCCCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCc-CccHHHHHHHHcCCCCCceEeehhhhh
Confidence 566665432 34578999999999999999997 99999999999998875 556788888899997668999999999
Q ss_pred cHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc
Q 013344 139 SSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFK 218 (445)
Q Consensus 139 sSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~ 218 (445)
+|++.||..|.++|++|.++++.
T Consensus 117 ~gg~~AL~~A~~~i~sg~~~~vL--------------------------------------------------------- 139 (388)
T 3v4n_A 117 YGATAGLQLAKNHVALHPDKKVL--------------------------------------------------------- 139 (388)
T ss_dssp GHHHHHHHHHHHHHHHCTTCEEE---------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHhcCCCCEEE---------------------------------------------------------
Confidence 99999999999999999887661
Q ss_pred cccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCC
Q 013344 219 DEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLP 298 (445)
Q Consensus 219 ~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~ 298 (445)
++..|.. . ..++. .+...++|||+|+||...+.
T Consensus 140 ---------------------Vvg~e~~-s------------~~~~~------~~~~lfGDGA~A~ll~~~~~------- 172 (388)
T 3v4n_A 140 ---------------------VVAADIA-K------------YGLNS------GGEPTQGAGAVAMLVSSEPR------- 172 (388)
T ss_dssp ---------------------EEEEEEE-C------------CCTTC------TTGGGCEEEEEEEEEEESCS-------
T ss_pred ---------------------EEEehhh-c------------ccCCC------CCCCccccceeEEEeecCCC-------
Confidence 1111100 0 00000 01233789999999987431
Q ss_pred eeEEEEE-eEEe-e----cCCCCC------C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-------
Q 013344 299 ILGVFRT-FAAV-G----VDPAIM------G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF------- 351 (445)
Q Consensus 299 ~~~~i~~-~~~~-~----~~p~~~------~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~------- 351 (445)
++..... .... . ..|... + .....+++++|+++|++++|||+|.+|++|..+.
T Consensus 173 il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hqp~~k~~~ka~~ri 252 (388)
T 3v4n_A 173 ILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGKKALLAK 252 (388)
T ss_dssp SEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSSHHHHHHHHHHH
T ss_pred ceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCCCcchHHHHHHHHH
Confidence 1111000 0100 0 112110 1 0123688999999999999999999999886532
Q ss_pred -----HHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc-CCCCceeeEEEe--ecccceeEEEE-EEc
Q 013344 352 -----VYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR-GRDCRFGVISMC--IGTGMGAAAVF-ERG 422 (445)
Q Consensus 352 -----~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~-~~~~~~G~~~~~--~G~G~~~a~~l-~~~ 422 (445)
..+.+.|+++.+++..+. ..+||+++++++..|.++.++ +.. +.|..+++ +|+|+++.+.. ...
T Consensus 253 l~~~~~~~~~~l~~~~e~~~~~~------~~~GN~~sASi~l~L~~~l~~~g~~-~~Gd~ill~s~GsG~~ae~~~~~v~ 325 (388)
T 3v4n_A 253 ISDQTEAEQERILARYEESIIYS------RRVGNLYTGSLYLGLISLLENATTL-TAGNQIGLFSYGSGAVAEFFTGELV 325 (388)
T ss_dssp STTSCHHHHHHHHHHHHHHTTTG------GGTCCCGGGHHHHHHHHHHHHCSSC-CTTCEEEEEEEETTTEEEEEEEEEC
T ss_pred HhcccHHHHHHhCCCHHHHhhHH------HhcCchHHHHHHHHHHHHHHhcCcC-CCCCEEEEEEecCcceeEEEEEEEc
Confidence 345677888888876555 788999999999999998877 444 66765444 78888875433 333
Q ss_pred ccccc
Q 013344 423 DCADE 427 (445)
Q Consensus 423 ~~~~~ 427 (445)
+.+++
T Consensus 326 ~~~~~ 330 (388)
T 3v4n_A 326 AGYQN 330 (388)
T ss_dssp TTGGG
T ss_pred cCHHH
Confidence 44443
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.7e-21 Score=196.75 Aligned_cols=245 Identities=15% Similarity=0.165 Sum_probs=170.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCC--CCCCceEEecCcCcHHHHHHHHH
Q 013344 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADV 148 (445)
Q Consensus 71 ~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl--~~~~~~~~v~~~CsSgl~Al~~A 148 (445)
.++++.+|+.+|+++||+++|++|++||.|++|+.+++.. .+..+..++..+|+ +.++++++++++|+||+.||..|
T Consensus 48 ~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~-~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A 126 (450)
T 2f82_A 48 ELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNC 126 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCS-SSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCC-CCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHH
Confidence 5789999999999999999999999999999999987764 55678888888888 44789999999999999999999
Q ss_pred HHHHHcCCC--CeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 149 AAAIKAGFY--DIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 149 ~~~I~sG~~--~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
.++|++|.+ +++.
T Consensus 127 ~~~I~sg~~~~~~vL----------------------------------------------------------------- 141 (450)
T 2f82_A 127 VNWVESNSWDGRYGL----------------------------------------------------------------- 141 (450)
T ss_dssp HHHHHSTTCCSCEEE-----------------------------------------------------------------
T ss_pred HHHHHcCCCcCCeEE-----------------------------------------------------------------
Confidence 999999986 5541
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEe
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTF 306 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~ 306 (445)
++..|- .. +. +. .....++|||+|+||.+.+. ........+.
T Consensus 142 -------------Vvg~e~-~~--------------~~-~~----~~~~~fGDGA~A~ll~~~~~-----~~~~~~~~g~ 183 (450)
T 2f82_A 142 -------------VICTDS-AV--------------YA-EG----PARPTGGAAAIAMLIGPDAP-----IVFESKLRGS 183 (450)
T ss_dssp -------------EEEEEE-EC--------------CS-SS----TTGGGCEEEEEEEEEESSCS-----EEEEEEEEEE
T ss_pred -------------EEEeee-cc--------------cc-CC----CCCcccccceEEEEeccCCc-----eEEEecccee
Confidence 111110 00 00 00 01223799999999986531 1111111222
Q ss_pred EEee----cCCC-------CCCc--------cHHHHHHHHHH------HcCCCCCCccEEEecCCChHHHHHHHHHcCC-
Q 013344 307 AAVG----VDPA-------IMGV--------GPAVAIPAAVK------SAGLQLDDIDLFEINEAFASQFVYCRNKLGL- 360 (445)
Q Consensus 307 ~~~~----~~p~-------~~~~--------~~~~ai~~aL~------~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl- 360 (445)
.... ..|. ..+. ....+++.+|+ ++|++++|||+|.+|+++..+...+.+.|++
T Consensus 184 ~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~~did~~v~Hq~~~~i~~~~~~~L~~~ 263 (450)
T 2f82_A 184 HMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSPYNKLVQKSFARLLYN 263 (450)
T ss_dssp EECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred ehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCChhhcCEEEecCChHHHHHHHHHHhccc
Confidence 2111 1121 0111 12257777886 8999999999999999999999999999983
Q ss_pred -----------------CC---------------C-------------CcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 361 -----------------DP---------------E-------------KINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 361 -----------------~~---------------~-------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
++ + ++.++. ...+.+||+++++++..|..+.+
T Consensus 264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~s~---~~~~~~GN~~saSi~l~L~~~l~ 340 (450)
T 2f82_A 264 DFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTT---LVPKQVGNMYTASLYAAFASLVH 340 (450)
T ss_dssp HHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGGGC---HHHHHHCCCGGGHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhHHH---HHHHhcCchHHHHHHHHHHHHHH
Confidence 32 1 222211 11267899999999999998876
Q ss_pred cCC-CCceeeEEEe--ecccceeEEEEEEcc
Q 013344 396 RGR-DCRFGVISMC--IGTGMGAAAVFERGD 423 (445)
Q Consensus 396 ~~~-~~~~G~~~~~--~G~G~~~a~~l~~~~ 423 (445)
++. . +.|..+++ +|+|+++++++.++.
T Consensus 341 ~~~~~-~~Gd~ill~s~GsG~~~~~~~l~~~ 370 (450)
T 2f82_A 341 NKHSD-LAGKRVVMFSYGSGSTATMFSLRLC 370 (450)
T ss_dssp HHGGG-CTTCEEEEEEEETTTEEEEEEEEEC
T ss_pred hCccC-CCCCEEEEEeecCCcccEEEEEEEe
Confidence 542 2 44554433 899999877777663
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-19 Score=201.51 Aligned_cols=239 Identities=23% Similarity=0.265 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc------------------ccchHHHHHHHHcCCCCCCceE
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS------------------QRASECRMAAFYAGFPETVPVR 132 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~------------------~~~~~a~~~~~~lGl~~~~~~~ 132 (445)
...|+.+++++||++||+++++|| +|++|+...++. .....+..++..+|+ +.|++
T Consensus 80 ~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~GPs~ 157 (965)
T 3hhd_A 80 QLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDF--RGPSI 157 (965)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCC--CCCee
Confidence 356999999999999999999999 788887665431 012456778889999 47999
Q ss_pred EecCcCcHHHHHHHHHHHHHHcCCCCeEecC-ccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Q 013344 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGSVN-PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 211 (445)
Q Consensus 133 ~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~-~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a 211 (445)
+|+++|+|++.||.+|++.|++|++|++... .... .+. ..+.. +.+.
T Consensus 158 tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~------------------------~~p---~~~~~--~~~~--- 205 (965)
T 3hhd_A 158 ALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVL------------------------LKP---NTSVQ--FLRL--- 205 (965)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC------------------------CCH---HHHHH--HHHH---
T ss_pred eecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccc------------------------cCH---HHHHH--HHhc---
Confidence 9999999999999999999999999998110 0000 000 00000 0000
Q ss_pred HHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHH
Q 013344 212 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 291 (445)
Q Consensus 212 ~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~ 291 (445)
+ .+++|..+ +| |+. ..+...++||++++||.+.+.
T Consensus 206 ---~------------------------~ls~~g~~------------~~-Fd~-----~adG~~~gEGagavvL~~l~~ 240 (965)
T 3hhd_A 206 ---G------------------------MLSPEGTC------------KA-FDT-----AGNGYCRSEGVVAVLLTKKSL 240 (965)
T ss_dssp ---T------------------------CBCTTCCC------------CT-TBT-----TCCSBCBBCEEEEEEEEEGGG
T ss_pred ---c------------------------CcCCCCcc------------cc-chh-----ccCCccccceEEEEEEecHHH
Confidence 0 12223222 22 332 122333799999999999887
Q ss_pred HHhcCCCeeEEEEEeEEeecCCCCC------CccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHH-HHHHcCC
Q 013344 292 AMRKGLPILGVFRTFAAVGVDPAIM------GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVY-CRNKLGL 360 (445)
Q Consensus 292 a~~~g~~~~~~i~~~~~~~~~p~~~------~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~~-~~e~LGl 360 (445)
|+ ++++.+.+++......... +.+...+++++|+++|++++||||+|.|.+++.. +.. +.+.++-
T Consensus 241 A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~ 316 (965)
T 3hhd_A 241 AR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCA 316 (965)
T ss_dssp CS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHCS
T ss_pred cC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCHHHHHHHHHHhcc
Confidence 75 4788999988875443322 2346789999999999999999999999998853 333 3344553
Q ss_pred C-CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 361 D-PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 361 ~-~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
. ..++....-+-.+||+.|++|++.++.++.+|+++
T Consensus 317 ~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~ 353 (965)
T 3hhd_A 317 TRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHG 353 (965)
T ss_dssp SCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred cCCCceeeeccccccccchhhhhHHHHHHHHHHHhcC
Confidence 2 23454444455579999999999999999999874
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-19 Score=216.04 Aligned_cols=249 Identities=16% Similarity=0.171 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC--------cEEEEeccCCCcc------------------------cchHHHHHHHH
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG--------DIVVGTVLAPGSQ------------------------RASECRMAAFY 122 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId--------~vi~g~~~~~~~~------------------------~~~~a~~~~~~ 122 (445)
...|+.+++++||+++|+++++|+ +|++|+..+.... ....++.+...
T Consensus 2647 ~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~ 2726 (3089)
T 3zen_D 2647 VALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSY 2726 (3089)
T ss_dssp HHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHH
Confidence 467999999999999999999885 5888886432100 01123333345
Q ss_pred cCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEe---cCccchhhhhhhccccchhHhH-HHHHHHhCCCHHHHH
Q 013344 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGS---VNPKVKAFEQAQNCLLPMGVTS-ENVAHRFGVTRKEQD 198 (445)
Q Consensus 123 lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~---~~~~~~~~~~~~~~~~~mg~~a-e~~a~~~gisre~~d 198 (445)
+|+ ++|+++|+++|+|+++||.+|+++|++|++|++. ... +... .......|+..+ ..++..++
T Consensus 2727 lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~--~~~~f~~~~als~~~~~~~~~------- 2794 (3089)
T 3zen_D 2727 VGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLE--AIIGFGDMAATADTEMMRAKG------- 2794 (3089)
T ss_dssp TCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHH--HHHHHHHHTCBCCHHHHHHTT-------
T ss_pred cCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHH--HHHHHHHhhhhhcchhhhhcc-------
Confidence 698 5799999999999999999999999999999981 110 0000 000000000000 00000000
Q ss_pred HHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCC
Q 013344 199 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVS 278 (445)
Q Consensus 199 ~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~ 278 (445)
.+++.. ++| |+. ..+...++
T Consensus 2795 ------------------------------------------~sp~~~------------crp-Fd~-----~~dG~v~G 2814 (3089)
T 3zen_D 2795 ------------------------------------------ISDSKF------------SRA-NDR-----RRLGFLEA 2814 (3089)
T ss_dssp ------------------------------------------CCTTTS------------CCS-SBT-----TCCCBCBB
T ss_pred ------------------------------------------CCcccc------------cCc-ccc-----CCCCEEEe
Confidence 011111 333 332 12233379
Q ss_pred CCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCC-------------ccHHHHHHHHHHHcCCCCCCccEEEecC
Q 013344 279 DGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG-------------VGPAVAIPAAVKSAGLQLDDIDLFEINE 345 (445)
Q Consensus 279 DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~-------------~~~~~ai~~aL~~aGl~~~DID~~e~h~ 345 (445)
||++++||++.+.|++.|.++++.+.+.+.. .++..++ .+...+++++|+++|++++||||+|.|.
T Consensus 2815 EGAgavVL~~~e~A~~~G~~I~avI~g~~~n-~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DIdyVEaHG 2893 (3089)
T 3zen_D 2815 QGGGTILLARGDLALKMGLPVLAVVGYAQSF-ADGVHTSIPAPGLGALGAARGGRESTLARSLAQLGVGADDIAVISKHD 2893 (3089)
T ss_dssp CEEEEEEEEEHHHHHHHTCCCCEEEEEEEEE-CCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEEEEECCC
T ss_pred ccceEEEEeeHHHHHhCCCceEEEEEEEEEe-cCCcccCccCCchhHHhHhhhhHHHHHHHHHHHcCCCHHHeeEEEEec
Confidence 9999999999999999999999955555543 2222111 1334689999999999999999999999
Q ss_pred CChHH----HH----HHHHHcCCCC-CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 346 AFASQ----FV----YCRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 346 ~~~~~----~~----~~~e~LGl~~-~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+++.. +. .+.+.+|... .+++.++++..+||+.|++|+++++.++.+|+++
T Consensus 2894 TGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g 2953 (3089)
T 3zen_D 2894 TSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDG 2953 (3089)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHC
T ss_pred CCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcC
Confidence 98863 22 3566788775 6799999999999999999999999999999874
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-19 Score=188.50 Aligned_cols=258 Identities=15% Similarity=0.096 Sum_probs=168.2
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHH---HcCCCCCCceEEec
Q 013344 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAF---YAGFPETVPVRTVN 135 (445)
Q Consensus 59 rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~---~lGl~~~~~~~~v~ 135 (445)
++++.+++. ...+++..+|+.+|+++||+++|++|++||.|++++.+++.. .+..+..++. .+|++ ++++++++
T Consensus 58 ~~Gi~~r~~-~~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~v~~~L~~lG~~-~~~~~dv~ 134 (478)
T 2p8u_A 58 GLGQAKMGF-CTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDK-SKSVKTNLMQLFEESGNT-DIEGIDTT 134 (478)
T ss_dssp CCCCCEEEC-CCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTTTTTCC-CCBCCEEE
T ss_pred ccCceEEEe-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCccc-CccHHHHHHHHHhhcCCC-CceEEEEc
Confidence 455544322 234788999999999999999999999999999999988764 3445666663 45554 68999999
Q ss_pred CcCcHHHHHHHHHHHHHHcCC--CCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 013344 136 RQCSSGLQAVADVAAAIKAGF--YDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 213 (445)
Q Consensus 136 ~~CsSgl~Al~~A~~~I~sG~--~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ 213 (445)
.+|+||+.||..|.++|++|. .+.+.
T Consensus 135 ~aC~gg~~AL~~A~~~i~sg~~~~~~aL---------------------------------------------------- 162 (478)
T 2p8u_A 135 NACYGGTAAVFNAVNWIESSSWDGRYAL---------------------------------------------------- 162 (478)
T ss_dssp SGGGHHHHHHHHHHHHHTSTTCCSCEEE----------------------------------------------------
T ss_pred chhHHHHHHHHHHHHHHHcCCccCCEEE----------------------------------------------------
Confidence 999999999999999999998 66551
Q ss_pred cCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHH
Q 013344 214 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 293 (445)
Q Consensus 214 ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~ 293 (445)
++..|- .+ +. ++. ....++|||+|+||...+. .
T Consensus 163 --------------------------VV~~Ei-a~--------------~~-~~~----~~~~fGdGA~A~Ll~~~~~-~ 195 (478)
T 2p8u_A 163 --------------------------VVAGDI-AV--------------YA-TGN----ARPTGGVGAVALLIGPNAP-L 195 (478)
T ss_dssp --------------------------EEEEEE-EC--------------CC-SST----TGGGCEEEEEEEEEESSCS-E
T ss_pred --------------------------EEEeee-ec--------------cc-CCC----CCCcccceeEEEEEecCCC-c
Confidence 111110 00 00 000 1223789999999986431 0
Q ss_pred hcCCCeeEEEEEeEEeecCCC------CC-Cc--------c---HHHHHHHHHH--------HcCCCCCCccEEEecCCC
Q 013344 294 RKGLPILGVFRTFAAVGVDPA------IM-GV--------G---PAVAIPAAVK--------SAGLQLDDIDLFEINEAF 347 (445)
Q Consensus 294 ~~g~~~~~~i~~~~~~~~~p~------~~-~~--------~---~~~ai~~aL~--------~aGl~~~DID~~e~h~~~ 347 (445)
.+.....+....-...-..|. .+ +. . ....+.+.++ ++|++++|||+|.+|+++
T Consensus 196 ~l~~~~~gs~~~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~~~~did~~v~H~~~ 275 (478)
T 2p8u_A 196 IFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTLNDFGFMIFHSPY 275 (478)
T ss_dssp EECTTCCEEEECCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCGGGCSEEEECCSS
T ss_pred eEeeccceecccchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCCChHHcCEEEecCCc
Confidence 001000111100000001121 01 10 0 0134566666 789999999999999999
Q ss_pred hHHHHHHHHHcC------------------------CCC---------C-------------CcCCCCChhcccChhhhH
Q 013344 348 ASQFVYCRNKLG------------------------LDP---------E-------------KINVNGGALAIGHPLGTT 381 (445)
Q Consensus 348 ~~~~~~~~e~LG------------------------l~~---------~-------------~vn~~gG~la~Gh~~Gat 381 (445)
..+...+.+.|+ +++ + ++-++- ...+.+||+
T Consensus 276 ~ki~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ek~~~~~~~~~~~~k~~~~~---~~~~~~GN~ 352 (478)
T 2p8u_A 276 CKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASL---LVSNQNGNM 352 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHHHHHHHHHTHHHHHHHTTGGG---HHHHHHCCC
T ss_pred HHHHHHHHHHhCcccccccccccccccccccchhccCChhhcccchhHHHHHHHHhHHHHHHhHHHHH---HHHHhcCch
Confidence 999999999998 444 2 222221 122678999
Q ss_pred HHHHHHHHHHHHHhcCC--CCceeeEEEe--ecccceeEEEEEEc
Q 013344 382 GARCVATLLHEMKRRGR--DCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 382 G~~~i~~~l~~L~~~~~--~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
++++++..|..+.+++. . +.|..+++ +|+|+++++.++++
T Consensus 353 ~saSi~l~L~~ll~~~~~~~-~~Gdrill~s~GsG~~~~~~~l~~ 396 (478)
T 2p8u_A 353 YTSSVYGSLASVLAQYSPQQ-LAGKRIGVFSYGSGLAATLYSLKV 396 (478)
T ss_dssp GGGHHHHHHHHHHHHSCHHH-HTTCEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCccC-CCCCEEEEEEEcchhhhEEEEEEE
Confidence 99999999999877653 2 34543333 89999987777665
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-19 Score=177.96 Aligned_cols=237 Identities=18% Similarity=0.224 Sum_probs=153.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHH
Q 013344 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAA 151 (445)
Q Consensus 72 ~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~ 151 (445)
++...+|+.+|+++||+++|++|+|||.|++|+.++.. .++..++..+| +|+++|+.+|+|+++||..|+++
T Consensus 52 e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~----~~A~~va~~Lg----ipafdV~~ACsg~~~AL~~Aa~~ 123 (347)
T 3lma_A 52 EMAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQN----VTANYVARHLK----IPFLCLFGACSTSMESIAISSAL 123 (347)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSS----TTHHHHHHHHC----CCEEEBCCSTTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCch----hHHHHHHHHhC----CCEEEecChhHHHHHHHHHHHHH
Confidence 44668899999999999999999999999999998832 25666666775 46999999999999999999999
Q ss_pred HHcCCCCeEe-cC-ccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceeccc
Q 013344 152 IKAGFYDIGS-VN-PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIV 229 (445)
Q Consensus 152 I~sG~~~~v~-~~-~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~ 229 (445)
|++|.++++. .. +++....
T Consensus 124 I~sG~~~~VLVVGaE~~S~ae----------------------------------------------------------- 144 (347)
T 3lma_A 124 IDGGFAKRALAATSSHNATAE----------------------------------------------------------- 144 (347)
T ss_dssp HHTTSCSEEEEEEEECGGGTT-----------------------------------------------------------
T ss_pred HhcCCCCEEEEEEeccccchh-----------------------------------------------------------
Confidence 9999999881 11 0110000
Q ss_pred CCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEe
Q 013344 230 DPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAV 309 (445)
Q Consensus 230 ~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~ 309 (445)
.+.|.+. ++...+|.+. .-+.|||+|+||.+... .+ ++.+...-
T Consensus 145 ---------------rq~r~p~---e~g~q~p~ta----------~~t~dGAGA~VL~~~g~------~p--~I~~~t~G 188 (347)
T 3lma_A 145 ---------------RQFRYPT---EYGGQKPGTA----------TSTVTGSGAVVLSQQPG------GI--KITSATVG 188 (347)
T ss_dssp ---------------CCC-----------------------------CCCEEEEEEEESSCC------SE--EEEEEECC
T ss_pred ---------------hhccCcc---hhcccCCchh----------cEEccceeEEEEEecCC------CC--ceeeeeee
Confidence 0000000 0001112111 11458999999986431 12 22221110
Q ss_pred ------ecCCCCCCcc--H--HHHHHHHHHHcCCCCCCccEEE---ecCCChHHHHHHHHHcCCCCCCcCCCCChhcccC
Q 013344 310 ------GVDPAIMGVG--P--AVAIPAAVKSAGLQLDDIDLFE---INEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 376 (445)
Q Consensus 310 ------~~~p~~~~~~--~--~~ai~~aL~~aGl~~~DID~~e---~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh 376 (445)
..+|..|+.. | ...|.+.|+++|++++|+|+|. +|+.+..+...+++++|++.++....=|.+-++.
T Consensus 189 kvvd~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~ 268 (347)
T 3lma_A 189 RVIDLGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGDLSGVGSPILKDLLKEEGINVGTKHNDCGLMIYTP 268 (347)
T ss_dssp CCBCCSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEESCHHHHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC
T ss_pred eeeccCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCChHHHHHHHHHHHHHHcCCChhHCccccceEEecC
Confidence 1234455532 2 3678999999999999999999 7788888999999999999887666555555543
Q ss_pred h---------hhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccce
Q 013344 377 P---------LGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 414 (445)
Q Consensus 377 ~---------~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~ 414 (445)
. .|++.....-.++.+|++... ++-+.+. .|+.++
T Consensus 269 ~~~~~~ggsg~~csa~v~~~~~~~~~~~g~~--~ril~~~-tGalls 312 (347)
T 3lma_A 269 DQQVFAGGSGCACSAVVTFAHIFKEIEAGRL--NRVLVVA-TGALLS 312 (347)
T ss_dssp ---------CCCCHHHHHHHTHHHHHHTTSC--SEEEEEE-EEECCC
T ss_pred CCcccCCCCccccHHHHHHHHHHHHHhcCcc--cEEEEEe-cccccC
Confidence 3 155555556666677764333 4423222 565554
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-19 Score=186.59 Aligned_cols=104 Identities=12% Similarity=0.057 Sum_probs=85.3
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCC--CCC
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF--PET 128 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl--~~~ 128 (445)
+.||. .+|++.+|+. +..+++..+|+++|+++||+++|++|++||.|++++.+++.. .+..+..++..+|+ ..+
T Consensus 33 ~~~i~--~~~Gi~~r~~-~~~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~-~ps~a~~v~~~l~~~g~~~ 108 (460)
T 2wya_A 33 AGKYT--VGLGQTRMGF-CSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDK-SKAVKTVLMELFQDSGNTD 108 (460)
T ss_dssp TTCCC--CCCCCCEEEC-CCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTGGGTCCC
T ss_pred HHHHH--HhhCcEEEEE-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCchHHHHHHHHhccCCCC
Confidence 44555 5788877654 456899999999999999999999999999999999998876 34445555556754 235
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCC
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYD 158 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~ 158 (445)
+.+++++.+|+++++||..|.++|++|.++
T Consensus 109 ~~a~D~~~aC~g~~~al~~A~~~i~~g~~~ 138 (460)
T 2wya_A 109 IEGIDTTNACYGGTASLFNAANWMESSSWD 138 (460)
T ss_dssp CBCCEEESGGGHHHHHHHHHHHHHTSTTCC
T ss_pred eeEechhhhhhhHHHHHHHHHHHHHhcccc
Confidence 789999999999999999999999999754
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=7.6e-17 Score=186.40 Aligned_cols=251 Identities=18% Similarity=0.219 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHHHHHcCC-CCCC----CC----cEEEEeccCCCc--------------------c---cchHHHHHHH-
Q 013344 75 PDDLLAPVLKAVIEKTNV-DPSE----VG----DIVVGTVLAPGS--------------------Q---RASECRMAAF- 121 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi-~~~d----Id----~vi~g~~~~~~~--------------------~---~~~~a~~~~~- 121 (445)
...|+.+++.+||+++|| +|.+ |+ ++++|+..+... + ....+..+..
T Consensus 1211 ~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~ 1290 (1887)
T 2uv8_A 1211 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1290 (1887)
T ss_dssp HHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHH
Confidence 356899999999999999 4776 55 566666543210 0 1122334444
Q ss_pred HcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc--cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHH
Q 013344 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP--KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQ 199 (445)
Q Consensus 122 ~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~--~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~ 199 (445)
.+|+ ++|+++++++|+|++.||..|++.|++|+++++.... .+.. ........|+.+++. . +.
T Consensus 1291 ~lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~--~~~~~f~~m~als~~--------~---~e 1355 (1887)
T 2uv8_A 1291 LISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQE--EGSFEFGNMKATSNT--------L---EE 1355 (1887)
T ss_dssp TTCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH--HHHHHHHHTTCBCCH--------H---HH
T ss_pred HcCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCCh--HHHHHHHHhhhhccc--------h---hh
Confidence 4888 5799999999999999999999999999999981100 0000 000000011111100 0 00
Q ss_pred HHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCC
Q 013344 200 AAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSD 279 (445)
Q Consensus 200 ~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~D 279 (445)
++ .| .++++. ++| |+. ..+....+|
T Consensus 1356 ~~------------~g-------------------------~~p~~~------------~RP-fd~-----~r~Gfv~gE 1380 (1887)
T 2uv8_A 1356 FE------------HG-------------------------RTPAEM------------SRP-ATT-----TRNGFMEAQ 1380 (1887)
T ss_dssp HH------------TT-------------------------CCGGGS------------CCT-TBT-----TCCSBCBBC
T ss_pred hc------------cc-------------------------CCCccC------------cCC-Ccc-----cCCCccccc
Confidence 00 00 012222 334 322 122233799
Q ss_pred CCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCC-----CC-Cc-----------------------------------
Q 013344 280 GAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-----IM-GV----------------------------------- 318 (445)
Q Consensus 280 GAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~-----~~-~~----------------------------------- 318 (445)
|++++||++.+.|.++|.++++.+.++++...... .. |.
T Consensus 1381 Gag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ql~~~~~~i~ 1460 (1887)
T 2uv8_A 1381 GAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIK 1460 (1887)
T ss_dssp EEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998887643211 10 00
Q ss_pred -------------------------c-------------------------------HHHHHHHHHHHcCCCCCCccEEE
Q 013344 319 -------------------------G-------------------------------PAVAIPAAVKSAGLQLDDIDLFE 342 (445)
Q Consensus 319 -------------------------~-------------------------------~~~ai~~aL~~aGl~~~DID~~e 342 (445)
. ...+++++|+++||+++||||++
T Consensus 1461 ~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AGl~p~DId~ve 1540 (1887)
T 2uv8_A 1461 DWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVAS 1540 (1887)
T ss_dssp HHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTTCCGGGEEEEE
T ss_pred HHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcCCCHHHceEEE
Confidence 0 02689999999999999999999
Q ss_pred ecCCChHHHH--------HHHHHcCCCC-CCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 343 INEAFASQFV--------YCRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 343 ~h~~~~~~~~--------~~~e~LGl~~-~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
+|.+++.... .....+|-.. .++....-+-.+|||.|++|+.+++.++..|++
T Consensus 1541 aHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~ 1602 (1887)
T 2uv8_A 1541 FHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNS 1602 (1887)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTT
T ss_pred ecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHh
Confidence 9999986421 1222334443 234333223336999999999999999999986
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-15 Score=175.95 Aligned_cols=249 Identities=19% Similarity=0.254 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHHcCCC-CCC----CC----cEEEEeccCCC--------------------cccc---hHHHHHHH-H
Q 013344 76 DDLLAPVLKAVIEKTNVD-PSE----VG----DIVVGTVLAPG--------------------SQRA---SECRMAAF-Y 122 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~-~~d----Id----~vi~g~~~~~~--------------------~~~~---~~a~~~~~-~ 122 (445)
..|+.+++.+||+++||+ |.+ |+ ++++|+..++. .++. ..+..+.. .
T Consensus 1187 ~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A 1187 TLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp HHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHh
Confidence 568999999999999997 766 44 57777765431 0011 12334444 4
Q ss_pred cCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc--cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHH
Q 013344 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP--KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQA 200 (445)
Q Consensus 123 lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~--~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~ 200 (445)
+|+ ++|+++++++|+|++.||..|++.|++|+++++.... .+.. ........|+.+++. .|++
T Consensus 1267 lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~--~~~~~f~~m~als~~-----------~de~ 1331 (1878)
T 2uv9_A 1267 LSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQE--EGSYEFANMGATSNA-----------KEEF 1331 (1878)
T ss_dssp CCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCH--HHHHHHHHHTCBCCH-----------HHHH
T ss_pred cCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCCh--HHHHHHHHhhhhccc-----------hhhh
Confidence 788 5799999999999999999999999999999981100 0000 000000001111100 0111
Q ss_pred HHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCC
Q 013344 201 AVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDG 280 (445)
Q Consensus 201 a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DG 280 (445)
+ .| .++++. ++| |+. ..+....+||
T Consensus 1332 a------------~g-------------------------~~p~~~------------~RP-fd~-----~r~Gfv~gEG 1356 (1878)
T 2uv9_A 1332 A------------RG-------------------------REPGEM------------SRP-TST-----TRNGFMESQG 1356 (1878)
T ss_dssp T------------TT-------------------------CCTTSS------------CCS-SBT-----TCCCBCBBCE
T ss_pred h------------cC-------------------------CCcccC------------cCC-Ccc-----CCCCCcccce
Confidence 1 00 112232 333 322 2233347999
Q ss_pred CeeEEeeCHHHHHhcCCCeeEEEEEeEEeecC-----CCCCCccH-----------------------------------
Q 013344 281 AGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGP----------------------------------- 320 (445)
Q Consensus 281 AaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~-----p~~~~~~~----------------------------------- 320 (445)
++++||++.+.|.++|.++++.+.++++.... |.. +.+.
T Consensus 1357 ag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paP-g~G~~t~ar~~~~~~ps~~~~~~~r~~~~~~~~~~i~~~ 1435 (1878)
T 2uv9_A 1357 CGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAP-GQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQW 1435 (1878)
T ss_dssp EEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCC-CSCGGGGGCCCCCSSCCGGGSHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCC-CcchhhhhhhccccCCCcccchHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999988875421 111 1110
Q ss_pred ----------------------------------------------------------------HHHHHHHHHHcCCCCC
Q 013344 321 ----------------------------------------------------------------AVAIPAAVKSAGLQLD 336 (445)
Q Consensus 321 ----------------------------------------------------------------~~ai~~aL~~aGl~~~ 336 (445)
..+++++|+++||+++
T Consensus 1436 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~aGl~~~ 1515 (1878)
T 2uv9_A 1436 KESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGLTID 1515 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTTTCCGG
T ss_pred hhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHcCCCHH
Confidence 1689999999999999
Q ss_pred CccEEEecCCChHHHH--------HHHHHcCCCCC-CcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 337 DIDLFEINEAFASQFV--------YCRNKLGLDPE-KINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 337 DID~~e~h~~~~~~~~--------~~~e~LGl~~~-~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
||||+++|.+++.... .....++-... ++...--+-.+|||.|++|+.+++.++..|++
T Consensus 1516 DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~ 1583 (1878)
T 2uv9_A 1516 DLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNT 1583 (1878)
T ss_dssp GEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTT
T ss_pred HeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhc
Confidence 9999999999986421 22223343322 23322222236999999999999999999986
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.7e-16 Score=178.28 Aligned_cols=251 Identities=19% Similarity=0.243 Sum_probs=155.5
Q ss_pred HHHHHHHHHHHHHHHcCCC-CCC----CC----cEEEEeccCCCcc-----------------------cchHHHHHHH-
Q 013344 75 PDDLLAPVLKAVIEKTNVD-PSE----VG----DIVVGTVLAPGSQ-----------------------RASECRMAAF- 121 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~-~~d----Id----~vi~g~~~~~~~~-----------------------~~~~a~~~~~- 121 (445)
...|+.+++.+||++|||+ |.+ |+ ++++|+..++... ....+..++.
T Consensus 1012 ~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~ 1091 (1688)
T 2pff_A 1012 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1091 (1688)
T ss_dssp STTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHH
Confidence 3579999999999999997 655 33 5666665444210 0112333444
Q ss_pred HcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc--cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHH
Q 013344 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP--KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQ 199 (445)
Q Consensus 122 ~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~--~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~ 199 (445)
.+|+ ++|+++++++|+|++.||..|++.|++|+++++.... .+.. ........|+.++. +
T Consensus 1092 ~LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp--~~~~~Fa~mgaLS~--------~------ 1153 (1688)
T 2pff_A 1092 LISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQE--EGSFEFGNMKATSN--------T------ 1153 (1688)
T ss_dssp SCCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCT--TTTTTTTTTSCSCC--------T------
T ss_pred HcCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCH--HHHHHHHhcccccc--------C------
Confidence 5787 5799999999999999999999999999999981110 0000 00000000000000 0
Q ss_pred HHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCC
Q 013344 200 AAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSD 279 (445)
Q Consensus 200 ~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~D 279 (445)
.+|+ ..| .++++. ++| |+. ..+...++|
T Consensus 1154 ------------------~~e~----------a~G------~~Pd~~------------cRP-Fd~-----~rdGfv~GE 1181 (1688)
T 2pff_A 1154 ------------------LEEF----------EHG------RTPAEM------------SRP-ATT-----TRNGFMEAQ 1181 (1688)
T ss_dssp ------------------TTTT----------TSS------CCSSSS------------CCS-SSS-----SCCCCCCCS
T ss_pred ------------------hhhh----------hcC------CChhhc------------cCc-Ccc-----CCCCCcccc
Confidence 0000 000 011222 344 322 123334899
Q ss_pred CCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecC-------CCCCCc----------------------------------
Q 013344 280 GAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-------PAIMGV---------------------------------- 318 (445)
Q Consensus 280 GAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~-------p~~~~~---------------------------------- 318 (445)
|++++||++.+.|.++|.++++.+.+++..... |. .|.
T Consensus 1182 GAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg-~GiLt~Ar~~~G~~taPSp~ld~~~R~rql~~~~~~i 1260 (1688)
T 2pff_A 1182 GAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPG-KGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQI 1260 (1688)
T ss_dssp CCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCC-SSSSSSSSSCCCCSSCSSCCSCTTCCHHHHSHHHHHH
T ss_pred ceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCC-CCccchhhhcccccCCCCcccChHHHHHHHHHHHHHH
Confidence 999999999999999999999998887654321 21 111
Q ss_pred --------------------------c-------------------------------HHHHHHHHHHHcCCCCCCccEE
Q 013344 319 --------------------------G-------------------------------PAVAIPAAVKSAGLQLDDIDLF 341 (445)
Q Consensus 319 --------------------------~-------------------------------~~~ai~~aL~~aGl~~~DID~~ 341 (445)
. ...+++++|+++||+++|||++
T Consensus 1261 ~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdyV 1340 (1688)
T 2pff_A 1261 KDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVA 1340 (1688)
T ss_dssp HHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCCC
T ss_pred HHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeEE
Confidence 0 0367899999999999999999
Q ss_pred EecCCChHHH----H-HHHHH---cCCCC-CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 342 EINEAFASQF----V-YCRNK---LGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 342 e~h~~~~~~~----~-~~~e~---LGl~~-~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
++|.+++... . .+.+. ++-.. .++...--+-.+|||.|++|+.+++.++.+|++.
T Consensus 1341 EaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G 1404 (1688)
T 2pff_A 1341 SFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSG 1404 (1688)
T ss_dssp CCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTC
T ss_pred EEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcC
Confidence 9998887431 1 11222 23322 1232221222369999999999999999999863
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.8e-15 Score=181.29 Aligned_cols=238 Identities=20% Similarity=0.223 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCcc------------------cchHHHHHHHHcCCCCCCceEE
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ------------------RASECRMAAFYAGFPETVPVRT 133 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~~------------------~~~~a~~~~~~lGl~~~~~~~~ 133 (445)
..|+.+++.+||++||+++++++ +|++|+...++.. ....+..++..+|+ ++|+++
T Consensus 79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~t 156 (2512)
T 2vz8_A 79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSIT 156 (2512)
T ss_dssp HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCcee
Confidence 46899999999999999987665 6888876544310 12356778889999 699999
Q ss_pred ecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Q 013344 134 VNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 212 (445)
Q Consensus 134 v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~ 212 (445)
|+++|+|++.||.+|++.|++|++|.+-... .+. ++....-.+..
T Consensus 157 v~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~------------------------~~p~~~~~~~~---------- 202 (2512)
T 2vz8_A 157 IDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVL------------------------LKPNSSLQFMK---------- 202 (2512)
T ss_dssp EECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECC------------------------CCHHHHHHHHH----------
T ss_pred eccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccc------------------------cCHHHHHHHcc----------
Confidence 9999999999999999999999999981100 000 00000011110
Q ss_pred HcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHH
Q 013344 213 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVA 292 (445)
Q Consensus 213 ~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a 292 (445)
. -.+++|..+ +| |+. ..|....+||++++||.+.+.|
T Consensus 203 -~------------------------~~ls~~g~c------------~~-Fd~-----~adG~~~gEG~~~~vLk~l~~A 239 (2512)
T 2vz8_A 203 -L------------------------GMLSQDGTC------------RS-FDA-----EGTGYCRAEAVVAVLLTKKSLA 239 (2512)
T ss_dssp -T------------------------TCBCTTCSC------------CS-SST-----TCCCBCBBCEEEEEEEEEGGGC
T ss_pred -C------------------------CCCCCCCCC------------CC-CCC-----CCCCcceeeeEEEEEEEEHHHC
Confidence 0 123444333 33 443 1223337999999999998887
Q ss_pred HhcCCCeeEEEEEeEEeecCCC------CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-----HHHHHHcCCC
Q 013344 293 MRKGLPILGVFRTFAAVGVDPA------IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-----VYCRNKLGLD 361 (445)
Q Consensus 293 ~~~g~~~~~~i~~~~~~~~~p~------~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~-----~~~~e~LGl~ 361 (445)
+ ++++.+.+++....... ..+.+...+|+++|+++|++|+||||+|.|...+... ..+.+.+|-.
T Consensus 240 ~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~gD~~E~~al~~~f~~~ 315 (2512)
T 2vz8_A 240 R----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELNGIVNALCAT 315 (2512)
T ss_dssp S----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTTHHHHHHHHHHHHHCSC
T ss_pred C----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCCCCHHHHHHHHHHhccc
Confidence 5 58899999887643211 1234557899999999999999999999999887643 2344556633
Q ss_pred C-CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 362 P-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 362 ~-~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
. .++....-+-.+||..|++|+..++.++..|+++
T Consensus 316 ~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~ 351 (2512)
T 2vz8_A 316 RREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHG 351 (2512)
T ss_dssp SSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTT
T ss_pred CCCCceeecccccccccccccchhHHHHHHHHHHCC
Confidence 2 2333333344589999999999999999999764
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=93.10 E-value=0.18 Score=49.18 Aligned_cols=78 Identities=21% Similarity=0.248 Sum_probs=52.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h-----~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..|++++|+++|++++|||++.+. .........+.++||+.+.... . + ..|++|...-+.....+.+
T Consensus 67 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~a~-d-----i--~~~C~g~~~aL~~A~~~i~ 138 (350)
T 4ewp_A 67 VGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAPAY-D-----V--SAACAGYCYGVAQADALVR 138 (350)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSCEE-E-----E--ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCceEE-E-----e--ecchhhHHHHHHHhhhhhh
Confidence 489999999999999999988763 2234556788899999764321 1 1 1367776666666666666
Q ss_pred cCCCCceeeEEE
Q 013344 396 RGRDCRFGVISM 407 (445)
Q Consensus 396 ~~~~~~~G~~~~ 407 (445)
.+.. ++.+++.
T Consensus 139 ~g~~-~~~Lvv~ 149 (350)
T 4ewp_A 139 SGTA-RHVLVVG 149 (350)
T ss_dssp TTSC-SEEEEEE
T ss_pred CCCc-cceeEee
Confidence 6553 5555443
|
| >3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A* | Back alignment and structure |
|---|
Probab=88.71 E-value=0.79 Score=45.35 Aligned_cols=43 Identities=21% Similarity=0.123 Sum_probs=34.9
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK 364 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~~ 364 (445)
.|++++|+++|++++|||++.+--. .......+.++||+.+..
T Consensus 87 ~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~ 133 (379)
T 3euo_A 87 EASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL 133 (379)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCCCCCe
Confidence 7999999999999999999887432 334567888999998764
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=88.50 E-value=0.88 Score=45.65 Aligned_cols=43 Identities=28% Similarity=0.325 Sum_probs=34.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-. ........+.+.||++++
T Consensus 142 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~ 188 (413)
T 3v7i_A 142 ERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGD 188 (413)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhCCCCC
Confidence 3899999999999999999988732 223456688899999874
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=87.25 E-value=1.1 Score=45.79 Aligned_cols=44 Identities=20% Similarity=0.121 Sum_probs=35.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK 364 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~~ 364 (445)
..|++++|+++|++++|||++.+--. .......+.++||+.+..
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~ 162 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL 162 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCe
Confidence 37999999999999999999987432 334567888999998754
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=86.42 E-value=1.1 Score=44.46 Aligned_cols=70 Identities=19% Similarity=0.162 Sum_probs=46.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC--cCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~~--vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..|++++|+++|++++|||++.+-.. .......+.+.||+++.. .... ..|++|....+.....+.
T Consensus 101 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~~--------~~~C~~~~~al~~A~~~i 172 (387)
T 3oit_A 101 AEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLH--------LNGCFAGCAALRLAKDLA 172 (387)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEE--------CCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeEE--------CchhHHHHHHHHHHHHHH
Confidence 37999999999999999999887422 233456788899998753 2211 135555555555555555
Q ss_pred hcCC
Q 013344 395 RRGR 398 (445)
Q Consensus 395 ~~~~ 398 (445)
+.+.
T Consensus 173 ~sg~ 176 (387)
T 3oit_A 173 ENSR 176 (387)
T ss_dssp HSST
T ss_pred hcCC
Confidence 5443
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=86.39 E-value=1.2 Score=44.23 Aligned_cols=44 Identities=18% Similarity=0.083 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK 364 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~~ 364 (445)
..|++++|+++|++++|||++.+--. .......+.+.||++...
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~ 154 (393)
T 3ov2_A 107 KEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTV 154 (393)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCc
Confidence 37999999999999999999887322 234566788999998754
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=85.74 E-value=1.7 Score=42.45 Aligned_cols=42 Identities=19% Similarity=0.169 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||.+.+-.. .......+.+.||+++
T Consensus 71 ~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~ 117 (354)
T 4efi_A 71 RKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPA 117 (354)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCC
Confidence 48999999999999999999887422 2335677889999964
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=85.51 E-value=1.6 Score=42.03 Aligned_cols=42 Identities=14% Similarity=0.223 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||.+.+-.. .......+.+.||+++
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~ 103 (321)
T 3il6_A 57 HQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATE 103 (321)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCC
Confidence 47999999999999999999887422 2335677888999975
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=85.37 E-value=1.8 Score=42.34 Aligned_cols=42 Identities=36% Similarity=0.395 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||++.+-.. .......+.+.||++.
T Consensus 79 ~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~~ 125 (359)
T 3h78_A 79 VPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRH 125 (359)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCCS
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCC
Confidence 48999999999999999999887422 2334678888999963
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=85.28 E-value=1.8 Score=41.65 Aligned_cols=41 Identities=22% Similarity=0.326 Sum_probs=32.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLD 361 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~ 361 (445)
..|++++|+++|++++|||.+.+-.. .......+.+.||++
T Consensus 63 ~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~ 108 (323)
T 3il3_A 63 FEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID 108 (323)
T ss_dssp HHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC
Confidence 48999999999999999999887321 233466788899995
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=84.96 E-value=1.5 Score=43.58 Aligned_cols=69 Identities=17% Similarity=0.150 Sum_probs=44.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~-----~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..|++++|+++|++++|||++.+-. ........+.+.||+.. + ++--..+++|....+....++.+
T Consensus 122 ~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~~-~--------~~dv~~aC~g~~~aL~~A~~~i~ 192 (392)
T 3led_A 122 VTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLGG-F--------AFDMNVACSSATFGLKTAADFVG 192 (392)
T ss_dssp HHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCCS-E--------EEEEECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCCC-e--------EEEECCccHHHHHHHHHHHHHHH
Confidence 4799999999999999999988732 22334567788999932 1 11112355655555555555555
Q ss_pred cCC
Q 013344 396 RGR 398 (445)
Q Consensus 396 ~~~ 398 (445)
.+.
T Consensus 193 ~g~ 195 (392)
T 3led_A 193 GGS 195 (392)
T ss_dssp TTS
T ss_pred CCC
Confidence 443
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=84.82 E-value=2.6 Score=40.81 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~-----~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||.+.+-... ......+.+.||+++.
T Consensus 73 ~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~ 120 (345)
T 3s21_A 73 TQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDH 120 (345)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCC
Confidence 489999999999999999998764221 2346678888999753
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=84.64 E-value=2.4 Score=47.13 Aligned_cols=77 Identities=16% Similarity=0.114 Sum_probs=47.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCCC--cCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h----~~~~~~~~~~~e~LGl~~~~--vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..|+++||+++|++++|||++.+- .........+.+.||+.... ..... .+++|....+....++.
T Consensus 694 ~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~--------~aCsg~~~Al~~A~~~i 765 (979)
T 3tsy_A 694 KEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYH--------QGCYAGGTVLRTAKDLA 765 (979)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEES--------CCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEeeec--------cccHhHHHHHHHHHHHH
Confidence 368999999999999999998863 22334566788899997644 22111 24444444444445555
Q ss_pred hcCCCCceeeEE
Q 013344 395 RRGRDCRFGVIS 406 (445)
Q Consensus 395 ~~~~~~~~G~~~ 406 (445)
+.+.. +..+++
T Consensus 766 ~sG~~-~~vLvv 776 (979)
T 3tsy_A 766 ENNAG-ARVLVV 776 (979)
T ss_dssp HTSTT-CEEEEE
T ss_pred HhCCC-CEEEEE
Confidence 55442 554443
|
| >3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A | Back alignment and structure |
|---|
Probab=84.57 E-value=1.9 Score=42.96 Aligned_cols=43 Identities=21% Similarity=0.186 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-. .+......+.+.||++..
T Consensus 120 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 166 (402)
T 3awk_A 120 KEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLGLRPT 166 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcCCCCc
Confidence 3799999999999999999887632 233456778889999764
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=84.37 E-value=2.1 Score=41.20 Aligned_cols=43 Identities=28% Similarity=0.430 Sum_probs=33.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||.+.+-.. .......+.+.||+++.
T Consensus 70 ~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~ 117 (333)
T 4dfe_A 70 FIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNH 117 (333)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCC
Confidence 48999999999999999999876322 23346678889999543
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=83.86 E-value=1.9 Score=42.31 Aligned_cols=43 Identities=12% Similarity=0.218 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~-----~~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||.+.+-. ........+.+.||+++.
T Consensus 85 ~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~ 132 (365)
T 3gwa_A 85 YEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTH 132 (365)
T ss_dssp HHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCC
Confidence 4899999999999999999987731 123345678889999843
|
| >1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A* | Back alignment and structure |
|---|
Probab=83.36 E-value=2.3 Score=42.00 Aligned_cols=43 Identities=21% Similarity=0.152 Sum_probs=33.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-. .+......+.+.||++..
T Consensus 107 ~~Aa~~aL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~ 153 (389)
T 1i88_A 107 KEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPY 153 (389)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCCCchHHHHHHHHcCcCCC
Confidence 3799999999999999999987632 233456678889999764
|
| >2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha} | Back alignment and structure |
|---|
Probab=83.29 E-value=2.1 Score=42.69 Aligned_cols=43 Identities=21% Similarity=0.214 Sum_probs=33.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-. .+......+.+.||++..
T Consensus 125 ~~Aa~~aL~~agl~~~dId~li~~t~~~~~~p~~a~~v~~~LGl~~~ 171 (413)
T 2p0u_A 125 KEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLGLRPN 171 (413)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEecCCcccCcHHHHHHHHhCCCCC
Confidence 3799999999999999999988632 233445688889999764
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=83.26 E-value=1.9 Score=42.68 Aligned_cols=43 Identities=21% Similarity=0.130 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-.. +......+.+.||++..
T Consensus 103 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~ 149 (387)
T 3a5r_A 103 KEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPS 149 (387)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCC
Confidence 37999999999999999998876322 22345678889999764
|
| >1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A | Back alignment and structure |
|---|
Probab=83.20 E-value=2 Score=42.69 Aligned_cols=43 Identities=21% Similarity=0.180 Sum_probs=33.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-.. +......+.+.||++..
T Consensus 112 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 158 (402)
T 1ee0_A 112 KEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPS 158 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcCcCCC
Confidence 37999999999999999998876422 23346678889999764
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=82.85 E-value=3.3 Score=40.91 Aligned_cols=68 Identities=18% Similarity=0.197 Sum_probs=45.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..+++++|+++|++++|||.+.+-.. .......+...||+++.....+. +...+++...+..+...++
T Consensus 34 ~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~~~v------~~~Css~~~al~~A~~~I~ 106 (395)
T 4e1l_A 34 TIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPSYTV------NKLCGSGLKSVQLAAQSIT 106 (395)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCEEEE------CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceEEEc------cccchHHHHHHHHHHHHHh
Confidence 48999999999999999998877422 12345667788999754222222 3345566666666665555
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=82.12 E-value=2.5 Score=41.19 Aligned_cols=41 Identities=22% Similarity=0.367 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC--hHHHHHHHHHcCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF--ASQFVYCRNKLGLD 361 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~--~~~~~~~~e~LGl~ 361 (445)
..|++++|+++|++++|||++.+-... ......+.+.||++
T Consensus 60 ~~Aa~~AL~~AGi~~~DID~II~gt~t~q~~~A~~va~~Lgip 102 (347)
T 3lma_A 60 EDAVQSALSKQNLKKEDIDIFLAGDLLNQNVTANYVARHLKIP 102 (347)
T ss_dssp HHHHHHHHHTTTCCGGGCSEEEEEESSSSSTTHHHHHHHHCCC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCchhHHHHHHHHhCCC
Confidence 489999999999999999999874321 11344566778665
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=82.12 E-value=4.1 Score=40.31 Aligned_cols=69 Identities=19% Similarity=0.071 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..+++++|+++|++++|||.+.+-.. .......+...||+++.....+. +...+++...+..+...++.
T Consensus 36 ~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v------~~aCss~~~al~~A~~~I~~ 109 (396)
T 4dd5_A 36 VTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTI------NIVCGSGLRSVSMASQLIAL 109 (396)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEE------CCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceEEEe------ccccHHHHHHHHHHHHHHhc
Confidence 48999999999999999999887422 12345677788999753222222 23355666566666665553
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=81.77 E-value=2.7 Score=41.10 Aligned_cols=42 Identities=17% Similarity=0.074 Sum_probs=32.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC------ChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA------FASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~------~~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||++.+-.. .......+.+.||+..
T Consensus 59 ~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~~ 106 (357)
T 3s3l_A 59 ARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRH 106 (357)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCCC
Confidence 48999999999999999999887432 1123567778899853
|
| >2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A* | Back alignment and structure |
|---|
Probab=81.63 E-value=2.5 Score=41.98 Aligned_cols=43 Identities=21% Similarity=0.255 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-.. +......+.+.||++..
T Consensus 120 ~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 166 (406)
T 2d3m_A 120 TEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQCAKLLGLHAN 166 (406)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCcCCC
Confidence 37999999999999999999876322 22345678889999764
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=80.87 E-value=2.3 Score=42.54 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-.. +......+.+.||++..
T Consensus 130 ~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~ 176 (413)
T 1xes_A 130 KEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPS 176 (413)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCc
Confidence 37999999999999999998875322 23345678889999764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 445 | ||||
| d1m3ka1 | 268 | c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea | 2e-61 | |
| d1ulqa1 | 273 | c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T | 1e-56 | |
| d1afwa1 | 269 | c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch | 1e-48 | |
| d1wdkc1 | 262 | c.95.1.1 (C:2-263) Fatty oxidation complex beta su | 3e-46 | |
| d1m3ka2 | 124 | c.95.1.1 (A:269-392) Biosynthetic thiolase {Zooglo | 1e-43 | |
| d1afwa2 | 124 | c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Sacc | 3e-43 | |
| d1ulqa2 | 125 | c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase | 2e-37 | |
| d1wdkc2 | 128 | c.95.1.1 (C:264-391) Fatty oxidation complex beta | 1e-35 | |
| d1teda_ | 372 | c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte | 1e-05 | |
| d1fwxa2 | 459 | b.69.3.1 (A:8-451) Nitrous oxide reductase, N-term | 0.001 |
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 198 bits (505), Expect = 2e-61
Identities = 95/274 (34%), Positives = 137/274 (50%), Gaps = 35/274 (12%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
+VI +A RTA+ G F +T +L A V+ AV+E+ V EV ++++G VL G
Sbjct: 3 PSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAG 61
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG--------- 160
+ + R AA AG P+ +N+ SGL+AVA I G I
Sbjct: 62 -EGQNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMS 120
Query: 161 ------------------SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202
++ +K MG T+ENVA ++ ++R EQD AV
Sbjct: 121 MAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAV 180
Query: 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 262
S KA AA G+FKDEI+P IV + GD +T+ D+ IR ++ +AKL+P
Sbjct: 181 ASQNKAEAAQKDGRFKDEIVP---FIVKGRKGD---ITVDADEYIRHGATLDSMAKLRPA 234
Query: 263 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 296
F K+GT TAGN+S ++DGA A LLM + A R+G
Sbjct: 235 FDKEGTVTAGNASGLNDGAAAALLMSEAEASRRG 268
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 186 bits (472), Expect = 1e-56
Identities = 102/280 (36%), Positives = 138/280 (49%), Gaps = 40/280 (14%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
+ IV A RT + K G PDDLLA L +++++ V EV D+ G G
Sbjct: 1 EAWIVEAVRTPIGK-HGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE 59
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAG--------------- 155
+ RMA AGFP V TVNR C SGL+AVA A AI AG
Sbjct: 60 DNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 119
Query: 156 ------------------FYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQ 197
YD V QA MG T+EN+A +G+ R+EQ
Sbjct: 120 APYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQ 179
Query: 198 DQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 257
D+ A+ SH+KA A G+F+DE++PV P ++ + + D+G R +TS+ +LA
Sbjct: 180 DRFALLSHQKAVRAWEEGRFQDEVVPV------PVKRGKEEILVEQDEGPRRDTSLEKLA 233
Query: 258 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297
L+PVF++ GT TAGNSS ++DGA AVLL+ A GL
Sbjct: 234 ALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 165 bits (418), Expect = 1e-48
Identities = 105/268 (39%), Positives = 144/268 (53%), Gaps = 35/268 (13%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK----TNVDPSEVGDIVVGTV 105
+DVVIVAA R+A+ K +G FKD D LL L I + D + + ++ G V
Sbjct: 10 EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNV 69
Query: 106 LAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVN-- 163
L A+E R A +G P + P +NRQCSSGL AV D+A IK G DIG
Sbjct: 70 L-NVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGV 128
Query: 164 ------------------PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205
+++ +A+ CL+PMG+T+ENVA F ++RK+QD+ A +S+
Sbjct: 129 ESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSY 188
Query: 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 265
+KA A G F+DEI+P+ D+G RPN + L+ ++P F K
Sbjct: 189 QKAYKAKNEGLFEDEILPI---------KLPDGSICQSDEGPRPNVTAESLSSIRPAFIK 239
Query: 266 D-GTTTAGNSSQVSDGAGAVLLMKRSVA 292
D GTTTAGN+SQVSDG VLL +RSVA
Sbjct: 240 DRGTTTAGNASQVSDGVAGVLLARRSVA 267
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 158 bits (401), Expect = 3e-46
Identities = 92/260 (35%), Positives = 132/260 (50%), Gaps = 22/260 (8%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAP 108
DVVIV RT + +SK G ++T +D+ A ++ V+E+ + VDP EV D++ G V
Sbjct: 5 RDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQT 64
Query: 109 GSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSV------ 162
Q + RMA+ P T +TV+R C S + A+ A AI G D+ V
Sbjct: 65 LEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM 124
Query: 163 ---------NPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 213
+P A MG+T+E + G++R++QD AV SH+ A AT
Sbjct: 125 GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATV 184
Query: 214 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK-KDGTTTAG 272
GKFKDEIIP+ + D+ IRP+T++ LA LKP F K GT TAG
Sbjct: 185 EGKFKDEIIPMQGYDENG-----FLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAG 239
Query: 273 NSSQVSDGAGAVLLMKRSVA 292
SSQ++DGA +++M A
Sbjct: 240 TSSQITDGASCMIVMSAQRA 259
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 146 bits (371), Expect = 1e-43
Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
Query: 300 LGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG 359
LG ++A VGVDP +MG GP A A++ AG ++ D+DL E NEAFA+Q LG
Sbjct: 4 LGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLG 63
Query: 360 LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 419
DP +NVNGGA+AIGHP+G +GAR + TLL EMKRRG R G+ ++CIG GMG A
Sbjct: 64 WDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRG--ARKGLATLCIGGGMGVAMCI 121
Query: 420 ER 421
E
Sbjct: 122 ES 123
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 146 bits (369), Expect = 3e-43
Identities = 76/126 (60%), Positives = 97/126 (76%), Gaps = 4/126 (3%)
Query: 296 GLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCR 355
LP+LG + F VGV P IMGVGPA AIP +++ GLQ+ DID+FEINEAFA+Q +YC
Sbjct: 2 NLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCI 61
Query: 356 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA 415
+KLG+D K+N GGA+A+GHPLG TGAR VAT+L E+K+ + GV+SMCIGTGMGA
Sbjct: 62 HKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD----QIGVVSMCIGTGMGA 117
Query: 416 AAVFER 421
AA+F +
Sbjct: 118 AAIFIK 123
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 125 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 130 bits (329), Expect = 2e-37
Identities = 58/124 (46%), Positives = 80/124 (64%), Gaps = 4/124 (3%)
Query: 300 LGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNK-- 357
L R A GV P IMG+GP A A++ AGL D+ L E+NEAFA+Q + +
Sbjct: 3 LARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWS 62
Query: 358 LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAA 417
L ++ +++N NGGA+A+GHPLG +GAR + TL+HEM+RR +FG+ +MCIG G G A
Sbjct: 63 LSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRK--VQFGLATMCIGVGQGIAV 120
Query: 418 VFER 421
V E
Sbjct: 121 VVEG 124
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 128 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 125 bits (316), Expect = 1e-35
Identities = 66/129 (51%), Positives = 82/129 (63%), Gaps = 5/129 (3%)
Query: 296 GLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCR 355
GL L V R+ A GVDPAIMG GP A A+K AGL + DID E+NEAFA+Q +
Sbjct: 1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVL 60
Query: 356 N---KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTG 412
L EK+N++GGA+A+GHP G +GAR TLL+ MK+ G FG+ +MCIG G
Sbjct: 61 KDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGG--TFGLSTMCIGLG 118
Query: 413 MGAAAVFER 421
G A VFER
Sbjct: 119 QGIATVFER 127
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 44.8 bits (105), Expect = 1e-05
Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 28/168 (16%)
Query: 278 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA------------IMGVGPAV--- 322
DG A+++ V + + V +F+ + + + +
Sbjct: 204 GDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGY 263
Query: 323 -------AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIG 375
+ + GLQ+ DIDL+ I+ LG+ E + +
Sbjct: 264 IFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQS---WDVL 320
Query: 376 HPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG---AAAVFE 420
G + + +L M ++ + + G G +F+
Sbjct: 321 ARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFD 368
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} Length = 459 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Score = 39.0 bits (91), Expect = 0.001
Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Query: 183 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTIS 242
SE +T E D V + + A AAG ++ E+ V VD + T
Sbjct: 214 SEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ-ELNGVKV--VDGRKEASSLFTRY 270
Query: 243 VDDGIRPN 250
+ P+
Sbjct: 271 IPIANNPH 278
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 445 | |||
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 100.0 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 100.0 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 100.0 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 100.0 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.97 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.97 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.97 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.96 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.91 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.58 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.55 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.55 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.54 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.43 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.41 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 99.4 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.4 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 99.38 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.32 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 99.25 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.2 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.19 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 99.19 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.01 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 99.01 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 99.0 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.0 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 98.95 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 98.91 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 98.83 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 98.75 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 98.71 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 98.6 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 98.59 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.51 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 98.33 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 98.32 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.23 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.18 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 97.68 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 95.57 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 95.53 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 95.27 | |
| d1xpma2 | 221 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 94.64 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 94.13 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 93.53 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 92.13 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 90.74 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 89.5 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 85.9 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 80.43 |
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.8e-47 Score=362.54 Aligned_cols=243 Identities=45% Similarity=0.678 Sum_probs=216.7
Q ss_pred hhhhhhcccccCCcccccccCCCCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHc----CCCCCCCCcEE
Q 013344 26 ESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT----NVDPSEVGDIV 101 (445)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~A----gi~~~dId~vi 101 (445)
.++|+|+| +|||||++.||||+|.++|.|++.++.+|+..+++++|+++ +|+|++||.|+
T Consensus 2 ~~~~~~~~----------------~dvvIv~a~RTP~gr~~~G~l~~~~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi 65 (269)
T d1afwa1 2 NSLLEKRP----------------EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVA 65 (269)
T ss_dssp TTTTSCCT----------------TCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEE
T ss_pred chhhhCCC----------------CCEEEEcceeCcceeCCCCCCCCCCHHHHHHHHHHHHHHhCCccccCChhhcCEEE
Confidence 45899999 99999999999999877899999999999999999999865 69999999999
Q ss_pred EEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCc--c--------
Q 013344 102 VGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNP--K-------- 165 (445)
Q Consensus 102 ~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~--~-------- 165 (445)
+|++.+... +.+++|.+++..|+|.++|+++||++|+||++||..|++.|++|.+|++ .++. .
T Consensus 66 ~G~v~~~g~-~~~~aR~~al~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~~p~~~~~~~~~ 144 (269)
T d1afwa1 66 CGNVLNVGA-GATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMI 144 (269)
T ss_dssp EECSSSBGG-GHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSC
T ss_pred ecccccccc-ccccchhhhhhccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeeccccccccccccccccc
Confidence 999988764 7899999999999999999999999999999999999999999999999 1110 0
Q ss_pred ----chhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeee
Q 013344 166 ----VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTI 241 (445)
Q Consensus 166 ----~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v 241 (445)
+.......++..+||.++|+++++||||||++|+|++.||++|.+|+.+|+|.+||+|++.+. ..++
T Consensus 145 ~~~~~~~~~~~~~~~~~Mg~tAe~~a~~~~isRee~D~~a~~S~~rA~~A~~~g~f~~eivpv~~~~---------~~~~ 215 (269)
T d1afwa1 145 SSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD---------GSIC 215 (269)
T ss_dssp CCHHHHHCTTGGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT---------SCEE
T ss_pred ccchhcccccccccccccccccccchhhcCccHHHHhhHHHHHHHHHHHHHhcCCcceEecceeccc---------ccEE
Confidence 111123345677999999999999999999999999999999999999999999999997642 1478
Q ss_pred ccCCCCCCCCCHHHHhcCCCcccC-CCccccCCCCCCCCCCeeEEeeCHHHHHh
Q 013344 242 SVDDGIRPNTSVSELAKLKPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMR 294 (445)
Q Consensus 242 ~~d~~~r~~~t~e~l~~~~p~~~~-~G~~t~~~~~~~~DGAaAvvL~s~~~a~~ 294 (445)
..||++|+++|+|+|.+|+|+|.+ +|++|++|+|+++|||+|+||+++++|++
T Consensus 216 ~~De~~R~~tt~E~La~L~P~f~~~~G~vTagnsS~~sDGAAavll~se~~A~e 269 (269)
T d1afwa1 216 QSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQ 269 (269)
T ss_dssp CSCSSCCSCCCHHHHHHCCBSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHH
T ss_pred ecCCCcCCCCCHHHHcCCCCccCCCCCeEcchhcChHHHHHHHHHHhhHHHhcC
Confidence 999999999999999999999976 59999999999999999999999999875
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=100.00 E-value=2.3e-46 Score=358.63 Aligned_cols=240 Identities=39% Similarity=0.547 Sum_probs=214.6
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
..|||||++.||||++ ++|.|++.++.||+..+++++|++++|+|++||.|++|++.+.+. ++++++.+++..|+|.+
T Consensus 2 ~~~V~Iv~~~RTP~g~-~~G~l~~~~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~-~~n~ar~~al~aglp~~ 79 (268)
T d1m3ka1 2 TPSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE-GQNPARQAAMKAGVPQE 79 (268)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCCEEEEeceeCcccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCc-chHHHhHHHHHhCCccc
Confidence 3689999999999997 578999999999999999999999999999999999999998774 88999999999999999
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccch--------------hh--h---hhhccccchhH
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKVK--------------AF--E---QAQNCLLPMGV 181 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~~--------------~~--~---~~~~~~~~mg~ 181 (445)
+|+++|+++|+||++||..|++.|++|++|++ .++ +... +. . .+.....+||.
T Consensus 80 vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~Mg~ 159 (268)
T d1m3ka1 80 ATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGT 159 (268)
T ss_dssp SEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCSSCCSSSCEEEEEHHHHHHTBCTTTCSBHHH
T ss_pred ccceeecccCcccchHHHHHHHHHhCCCceEEeeccccccccCchhhhcccCCcCCCcccccccccccCcCcccCCcHHH
Confidence 99999999999999999999999999999999 221 1100 00 0 11123467999
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
++|+++++||||||+||.|++.||++|..|+++|+|++||+|+..+.++ +..+++.|+++|+++|+|+|.+|+|
T Consensus 160 ~Ae~~A~~~gisRe~~D~~A~~S~~ra~~A~~~g~f~~ei~p~~~~~~~------g~~~v~~d~~~r~~tt~e~L~~L~p 233 (268)
T d1m3ka1 160 TAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRK------GDITVDADEYIRHGATLDSMAKLRP 233 (268)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTT------CCEEECSCSSCCTTCCHHHHHTCCB
T ss_pred HHHHHHHHHCcCHHHHHHHHHHHHHHhhhHHHcCCchhhccccccCCCC------CCeEEeCCCCCCCCCCHHHHcCCCC
Confidence 9999999999999999999999999999999999999999999875433 2367899999999999999999999
Q ss_pred cccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcC
Q 013344 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 296 (445)
Q Consensus 262 ~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g 296 (445)
+|+++|++|.+|+|+++|||+|+||++++.++++|
T Consensus 234 ~f~~~GtvTagnss~~~DGAAa~ll~se~~a~~~G 268 (268)
T d1m3ka1 234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRG 268 (268)
T ss_dssp SSCTTCCCBSSSBCCCEEEEEEEEEEEHHHHHHHT
T ss_pred CcCCCCcEEChhhChHHHHHHHHHHhhHHHHHhcC
Confidence 99999999999999999999999999999999876
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=2.6e-46 Score=356.91 Aligned_cols=241 Identities=37% Similarity=0.496 Sum_probs=214.3
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~-Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
+|||||++.||||+|.++|.+++.++.||+..+++++|++ +||+|++||.|++|++.+...++.+++|.+++..|+|.+
T Consensus 5 r~v~Iv~a~RTP~g~~~gg~~~~~~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~p~~ 84 (262)
T d1wdkc1 5 RDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHT 84 (262)
T ss_dssp TCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTT
T ss_pred CcEEEEeeeeCceeCCCCccccCCCHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhcccc
Confidence 8999999999999986667899999999999999999996 899999999999999998876688999999999999999
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCc--cch-----hh--hhhhccccchhHhHHHHHHHhCCC
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNP--KVK-----AF--EQAQNCLLPMGVTSENVAHRFGVT 193 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~--~~~-----~~--~~~~~~~~~mg~~ae~~a~~~gis 193 (445)
+|+++||++|+||+.||..|++.|++|.+|++ .++. ... .+ .....+...||.++|+++++||++
T Consensus 85 vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~mg~tae~~a~~~gis 164 (262)
T d1wdkc1 85 SAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGIS 164 (262)
T ss_dssp SEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHHHHTCC
T ss_pred cchhhccccccHHHHHHHHHHHHHHhhcCCceeeecccccccccccccccccccccccccccccchhhhHHHHHHHhccc
Confidence 99999999999999999999999999999999 2221 110 11 112334567999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC-CCccccC
Q 013344 194 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTTAG 272 (445)
Q Consensus 194 re~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~-~G~~t~~ 272 (445)
||++|.|++.||+++.+++.+|+|++||+||+++.++. ...+++.|+++|+++|+|+|.+++|+|++ +|++|.+
T Consensus 165 Re~~D~~a~~S~~ra~~A~~~G~f~~ei~pv~~~~~~~-----~~~~~~~De~~R~~tt~E~La~LkP~f~~~~GtvTag 239 (262)
T d1wdkc1 165 REQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENG-----FLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAG 239 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTC-----CEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGG
T ss_pred cccchhhhhhhhhhhhhHhhcCCcceeeeeeccccccc-----cccccccccCCCCCCCHHHHcCCCCcccCCCCcCcch
Confidence 99999999999999999999999999999998875432 12467899999999999999999999985 7999999
Q ss_pred CCCCCCCCCeeEEeeCHHHHHhc
Q 013344 273 NSSQVSDGAGAVLLMKRSVAMRK 295 (445)
Q Consensus 273 ~~~~~~DGAaAvvL~s~~~a~~~ 295 (445)
|+|+++|||+|+||++++.|+++
T Consensus 240 nsS~isDGAAavll~se~~akeL 262 (262)
T d1wdkc1 240 TSSQITDGASCMIVMSAQRAKDL 262 (262)
T ss_dssp GBCCCEEEEEEEEEEEHHHHHHT
T ss_pred hhChHHHHHHHHHHhCHHHHhcC
Confidence 99999999999999999999875
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=8.7e-46 Score=356.30 Aligned_cols=240 Identities=42% Similarity=0.595 Sum_probs=214.0
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
|+|||++.||||+| +.|.|++.++.||+..+++++|++++|+|++||.|++|++.+.+.++.++++.+++..|+|.++|
T Consensus 1 ~a~Iv~~~RTPfgk-~~G~l~~~~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp 79 (273)
T d1ulqa1 1 EAWIVEAVRTPIGK-HGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVA 79 (273)
T ss_dssp CEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCE
T ss_pred CEEEEccccCcccc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccc
Confidence 68999999999998 57999999999999999999999999999999999999998876667799999999999999999
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccch---------hh----------------hhhhcccc
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKVK---------AF----------------EQAQNCLL 177 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~~---------~~----------------~~~~~~~~ 177 (445)
+++||++|+||++||.+|++.|++|..|++ .++ +... .+ ........
T Consensus 80 ~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (273)
T d1ulqa1 80 GCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTE 159 (273)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCC
T ss_pred eEEEecccchHHHHHHHHHHHHhcCCCccceeeeccccchhhhccccccccccCCCcccccccccccccchhhhcccccc
Confidence 999999999999999999999999999999 121 1000 00 00112345
Q ss_pred chhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHh
Q 013344 178 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 257 (445)
Q Consensus 178 ~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~ 257 (445)
+|+.++|+++++||||||+||.|+++||+++..|+++|+|+.||+|+..... .+.++++.|+++|+++|+|+|.
T Consensus 160 ~m~~~ae~~a~~~~itRe~~D~~a~~S~~ra~~A~~~g~f~~eivp~~~~~~------~~~~~v~~d~~~r~~tt~e~La 233 (273)
T d1ulqa1 160 SMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRG------KEEILVEQDEGPRRDTSLEKLA 233 (273)
T ss_dssp CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEET------TEEEEECSCSCCCTTCCHHHHH
T ss_pred chHHHHHHHHhhcCCCHHHHHHHHhhHHHHHHHHHHcCCcceeeeeeccccc------cCceEEeCCCCcCCCCCHHHHc
Confidence 7999999999999999999999999999999999999999999999976542 2236788999999999999999
Q ss_pred cCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 258 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 258 ~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
+++|+|+++|++|.+|+|+++|||+|+||++++.++++|+
T Consensus 234 ~L~p~f~~~G~vTagnss~~sDGAAa~vl~se~~a~~lGL 273 (273)
T d1ulqa1 234 ALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273 (273)
T ss_dssp HSCBSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTC
T ss_pred cCCCCcCCCCcEEchhhchHHHHHHHHHHccHHHHHHcCC
Confidence 9999999999999999999999999999999999999985
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.97 E-value=1.5e-31 Score=221.96 Aligned_cols=123 Identities=52% Similarity=0.875 Sum_probs=120.2
Q ss_pred CCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccC
Q 013344 297 LPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 376 (445)
Q Consensus 297 ~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh 376 (445)
++|++++++++..+++|..|+.+|..|++++|+++|++++|||+||+||+|+.+.+.+.++|+++++++|++||+|++||
T Consensus 1 L~Plari~~~a~~g~dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~q~la~~~~l~id~~kvN~~GGaiAlGH 80 (124)
T d1m3ka2 1 IQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGH 80 (124)
T ss_dssp CCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCC
T ss_pred CCcEEEEEEEEEEecChHHhccchHHHHHHHHHHcCCChhcccHHHhcccchhheeeehHhhCCChhhcCCCCCcccccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 377 PLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 377 ~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
|+|+||++.+..++++|+++++ ++|++++|+|+|++.+++|||
T Consensus 81 P~GaSGarl~~tl~~~L~~~~~--~~Glas~C~gGG~g~A~liE~ 123 (124)
T d1m3ka2 81 PIGASGARILNTLLFEMKRRGA--RKGLATLCIGGGMGVAMCIES 123 (124)
T ss_dssp CTTTHHHHHHHHHHHHHHHHTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred CcCccchhHHHHHHHHHHhcCC--CEEEEEecccccceeEEEEEe
Confidence 9999999999999999999988 999999999999999999987
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2.5e-31 Score=220.90 Aligned_cols=124 Identities=61% Similarity=1.064 Sum_probs=119.8
Q ss_pred cCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcc
Q 013344 295 KGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAI 374 (445)
Q Consensus 295 ~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~ 374 (445)
+|++|++++++|+..+++|..|+.+|..|++++|+++|++++|||+||+||+|+.+.+.+.++|+++++++|++||++++
T Consensus 1 Lgl~plAri~~~a~~g~~P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAl 80 (124)
T d1afwa2 1 LNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIAL 80 (124)
T ss_dssp TTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHH
T ss_pred CCCcEEEEEEEEEEEecCHHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchhHHHHHHHHHcCCChhhccccCcccee
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEEc
Q 013344 375 GHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 422 (445)
Q Consensus 375 Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~~ 422 (445)
|||+|+||++.+.+++++|++ + ++|++++|.|+|++.+++|+|+
T Consensus 81 GHP~GaSGarlv~~l~~~L~~--~--~~glas~C~ggG~G~a~~ier~ 124 (124)
T d1afwa2 81 GHPLGCTGARQVATILRELKK--D--QIGVVSMCIGTGMGAAAIFIKE 124 (124)
T ss_dssp CBCTTTHHHHHHHHHHHHSCT--T--CEEEEEEEETTTEEEEEEEEEC
T ss_pred cCCcCCchHHHHHHHHHHhcc--C--CEEEEEEcccCCcEEEEEEEeC
Confidence 999999999999999999975 4 7899999999999999999986
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.97 E-value=1.1e-30 Score=217.00 Aligned_cols=122 Identities=48% Similarity=0.830 Sum_probs=117.8
Q ss_pred CeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHH--cCCCCCCcCCCCChhccc
Q 013344 298 PILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNK--LGLDPEKINVNGGALAIG 375 (445)
Q Consensus 298 ~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~--LGl~~~~vn~~gG~la~G 375 (445)
+|++++++|+..+++|..|+.+|..+++++|+++|++++|||+||+||+|+.+.+.++++ |+++++++|++||++++|
T Consensus 1 KPlA~i~~~~~~g~~P~~~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFAaq~l~~~~~~~l~~d~~kvN~~GGaIAlG 80 (125)
T d1ulqa2 1 RPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALG 80 (125)
T ss_dssp CCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHC
T ss_pred CCeEEEEEEEEEecCHHHHhhccHHHHHhHhhccCcCccccchheeccccchhHHHHHHHhhccCchhhcCCCCCccccc
Confidence 578999999999999999999999999999999999999999999999999999999998 667889999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 376 HPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 376 h~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
||+|+||++.+.+++++|+++++ ++|++++|.|+|++.++++||
T Consensus 81 HP~GASGari~~tl~~~L~~~~~--~~G~as~C~gGG~g~A~~iE~ 124 (125)
T d1ulqa2 81 HPLGASGARILTTLVHEMRRRKV--QFGLATMCIGVGQGIAVVVEG 124 (125)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEEEEEEEEE
T ss_pred CCccccchhHHHHHHHHHHhcCC--CEEEEEecccccceeEEEEEe
Confidence 99999999999999999999988 999999999999999999997
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.96 E-value=4.3e-30 Score=214.57 Aligned_cols=124 Identities=53% Similarity=0.872 Sum_probs=118.9
Q ss_pred CCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCC---CCCCcCCCCChh
Q 013344 296 GLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL---DPEKINVNGGAL 372 (445)
Q Consensus 296 g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl---~~~~vn~~gG~l 372 (445)
|++|+++++++++.+++|..|+.+|..|++++|+++||+++|||+||+||+|+.+.+.+.+.+++ +.+|+|++||++
T Consensus 1 Gl~pla~i~~~~~~g~dP~~mg~~p~~A~~klL~ragl~~~did~~EinEAFA~q~l~~~~~~~~~~~~~ekvN~~GGai 80 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAI 80 (128)
T ss_dssp TCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHH
T ss_pred CCCEEEEEEEEEEEecCHHHhccCcHHHHHHHhhhcCccccccceEEeecccchhhhhhhhhcccccCCcceecCCCCcc
Confidence 57899999999999999999999999999999999999999999999999999999999999775 458999999999
Q ss_pred cccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 373 AIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 373 a~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
++|||+|+||++.+..++++|+++++ ++|++++|+|+|++.+++|+|
T Consensus 81 AlGHP~GASGaRlv~~l~~~L~~~~~--~~Glas~C~gGG~g~A~~iEr 127 (128)
T d1wdkc2 81 ALGHPFGCSGARISGTLLNVMKQNGG--TFGLSTMCIGLGQGIATVFER 127 (128)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred cccccccccchhHHHHHHHHHHhcCC--CEEEEEecccccceeEEEEEe
Confidence 99999999999999999999999988 999999999999999999987
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.91 E-value=3.7e-24 Score=213.72 Aligned_cols=249 Identities=17% Similarity=0.164 Sum_probs=172.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEec-CcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~-~~CsSgl~Al~~A~~~ 151 (445)
++..+|+++|+++||+++|++|+|||.||+++++ ++. .+..+..++..||++..+..++++ .+|+|++.||..|..+
T Consensus 90 e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~-~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~ 167 (372)
T d1teda_ 90 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATST-GFI-APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY 167 (372)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESS-CCC-SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccC-CCC-CchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHH
Confidence 3467899999999999999999999999999876 443 456677888899998767778876 5899999999999999
Q ss_pred HHcCCCCeE-----ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 152 IKAGFYDIG-----SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 152 I~sG~~~~v-----~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
|++|.++.+ +..+..... .
T Consensus 168 l~sg~~~~~LVV~~E~~s~~~~~---------------------~----------------------------------- 191 (372)
T d1teda_ 168 VRAHPAMKALVVCIELCSVNAVF---------------------A----------------------------------- 191 (372)
T ss_dssp HHHSTTCEEEEEEEEECGGGCCC---------------------C-----------------------------------
T ss_pred HhcCCCccceeeeehhhcccccC---------------------C-----------------------------------
Confidence 999988776 111110000 0
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEe
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTF 306 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~ 306 (445)
-+.++. .....++|||+|+||...+....... ....+.+.
T Consensus 192 ------------------------d~~~~~---------------~~~~lfGDGAaA~ll~~~~~~~~~~~-~~~~~~~~ 231 (372)
T d1teda_ 192 ------------------------DDINDV---------------VIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSS 231 (372)
T ss_dssp ------------------------SSHHHH---------------HHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEE
T ss_pred ------------------------Ccchhh---------------hhhhhhcccceeEEeccCCcccccCC-ceeEEecc
Confidence 000000 00112689999999976543221111 11111221
Q ss_pred EEeecCCC------------C---CC--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCC
Q 013344 307 AAVGVDPA------------I---MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 307 ~~~~~~p~------------~---~~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~ 363 (445)
.....+.. . .+ .....+++++|+++|++++|||+|.+|+++..+...+.+.||++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~~~i~~~i~~~Lgl~~e 311 (372)
T d1teda_ 232 FSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAE 311 (372)
T ss_dssp EEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHHHHHHHHHTCCGG
T ss_pred cccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCCHHHhhhhhccCccHHHHHHHHHHcCCCHH
Confidence 11111100 0 00 1124789999999999999999999999999999999999999999
Q ss_pred CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEE-Ee-ecccceeEEEEEEc
Q 013344 364 KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS-MC-IGTGMGAAAVFERG 422 (445)
Q Consensus 364 ~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~-~~-~G~G~~~a~~l~~~ 422 (445)
++..+-..+ ..+||+++++++.+|+++.+++...+.|..+ ++ +|+|++++.+|++.
T Consensus 312 k~~~s~~~l---~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~ 369 (372)
T d1teda_ 312 LAAQSWDVL---ARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDI 369 (372)
T ss_dssp GGHHHHHHH---HHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEE
T ss_pred HhhhhHHHH---hccCCcHHHHHHHHHHHHHHhCCCCCCCCEEEEEEEcHHHhHHHHhhee
Confidence 986543111 4579999999999999998876542334433 33 89999997766654
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.58 E-value=2.2e-15 Score=133.53 Aligned_cols=104 Identities=19% Similarity=0.171 Sum_probs=90.8
Q ss_pred EEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCce
Q 013344 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (445)
Q Consensus 52 v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~ 131 (445)
.+|. .+|++.+|+. ..+++++.+|+.+|+++||++++++|++||.|++++.++++. .+..+..++..||++ ++++
T Consensus 31 ~~i~--~~~Gi~~r~~-~~~~~~~~~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~-~P~~a~~v~~~Lgl~-~~~~ 105 (174)
T d1hnja1 31 EWIV--TRTGIRERHI-AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHA-FPSAACQIQSMLGIK-GCPA 105 (174)
T ss_dssp HHHH--HHHCCCEEEE-CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHHTCC-SSCE
T ss_pred HHHH--hccCcceeee-cCCCccchHHHHHHHHHhhhhcccccccccEEEEecCCcccc-ccchhhhhhhccCCC-chhh
Confidence 4444 4677776653 446789999999999999999999999999999999999986 567788888899996 6999
Q ss_pred EEecCcCcHHHHHHHHHHHHHHcCCCCeE
Q 013344 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 132 ~~v~~~CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
++++.+|+|+++||..|..+|++|.++.+
T Consensus 106 ~di~~~C~g~~~al~~A~~~i~sg~~~~~ 134 (174)
T d1hnja1 106 FDVAAACAGFTYALSVADQYVKSGAVKYA 134 (174)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHTTSCSEE
T ss_pred hhhhhhhccHHHHHHHHHHHHhcCCccee
Confidence 99999999999999999999999998876
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.55 E-value=5e-15 Score=132.00 Aligned_cols=100 Identities=18% Similarity=0.123 Sum_probs=88.2
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..+++++.+|+.+|+++||++++++|+|||.|++++.++++. .+..+..++..+|.+ ++.+++++.+
T Consensus 42 ~~tGi~~R~~-~~~~e~~~~ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~-~p~~a~~v~~~l~~~-~~~~~Dv~~~ 118 (181)
T d1mzja1 42 TRTGIRSRRI-AEPDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVH-TPPLSVAIAHELGAD-NAGGFDLSAA 118 (181)
T ss_dssp HHHCCSEEEC-CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCC-SSCHHHHHHHHHTCT-TCEEEEEECG
T ss_pred hccCcceehh-hccCCcHHHHhHHHHHhhhhhccCChhHCeEEEEeccCCccc-cccHHHHHHHhhcCC-CccceeHHhh
Confidence 4688876654 557899999999999999999999999999999999999876 566677788889986 6899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeE
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
|+|+++||.+|..+|++|.++.+
T Consensus 119 C~g~~~aL~~A~~~i~~~~~~~~ 141 (181)
T d1mzja1 119 CAGFCHALSIAADAVESGGSRHV 141 (181)
T ss_dssp GGHHHHHHHHHHHHHHHSSCSCE
T ss_pred hccHHHHHHHHhCHhhcCCCcee
Confidence 99999999999999999987665
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.55 E-value=7.5e-15 Score=129.78 Aligned_cols=99 Identities=16% Similarity=0.196 Sum_probs=86.8
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..++++..+|+.+|+++||+++|++|+|||.|++++.++++. .+..+..++..||. ++.+|+++.+
T Consensus 33 ~~~Gi~~R~~-~~~~e~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~-~p~~a~~v~~~Lg~--~~~~~di~~~ 108 (172)
T d1ub7a1 33 TRTGIKERRV-AAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDAL-FPDTAALVQARFGL--KAFAYDLLAG 108 (172)
T ss_dssp HHTCCCEEEE-CCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEE-ESCHHHHHHHHTTC--CCEEEEEECS
T ss_pred hccCceeeee-ccccccccHHHHHHHHHHHhhcCcccccceEEEEeccccccc-ccchHHHHHHHhcc--Cccceeehhc
Confidence 4677776654 556789999999999999999999999999999999999876 56667778888995 5899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeE
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
|++++.+|.+|..+|++|.++.+
T Consensus 109 C~g~~~al~~a~~~~~~~~~~~~ 131 (172)
T d1ub7a1 109 CPGWIYALAQAHALVEAGLAQKV 131 (172)
T ss_dssp TTHHHHHHHHHHHHHHTTSCSEE
T ss_pred cccHHHHHHHHhhhhhcCCccee
Confidence 99999999999999999988776
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.43 E-value=6.4e-14 Score=120.73 Aligned_cols=96 Identities=30% Similarity=0.330 Sum_probs=87.4
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCc
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCR 401 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~ 401 (445)
.+++++|+++|++++|||+|.+||++..+...+.++||++++++..+. +.+|||++++++.+|+++.+++.. +
T Consensus 51 ~~i~~~L~~~g~~~~dId~~i~Hqa~~~~~~~i~~~lgi~~~k~~~~~------~~~Gn~~sasip~~L~~~~~~~~~-~ 123 (149)
T d1ub7a2 51 TATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVNV------DRYGNTSTASIPLALKEAVDAGRI-R 123 (149)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHHHHTSS-C
T ss_pred HHHHHHHHhhccccccccEEEeeccchHHHHHHHhhccchhhHHHHHH------HHhcCCcchhHHHHHHHHHHcCCC-C
Confidence 799999999999999999999999999999999999999999998876 899999999999999999888765 6
Q ss_pred eeeEEEe--ecccceeEEEEEEccc
Q 013344 402 FGVISMC--IGTGMGAAAVFERGDC 424 (445)
Q Consensus 402 ~G~~~~~--~G~G~~~a~~l~~~~~ 424 (445)
.|+.+++ +|+|++++++++||..
T Consensus 124 ~Gd~vll~g~G~G~s~ga~llrw~g 148 (149)
T d1ub7a2 124 EGDHVLLVSFGAGLTWAAAVLTWGG 148 (149)
T ss_dssp TTCEEEEEEEETTTEEEEEEEECCC
T ss_pred CCCEEEEEEEchHhhhEEEEEEECC
Confidence 7765544 8999999999999864
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.41 E-value=1.4e-13 Score=117.68 Aligned_cols=94 Identities=21% Similarity=0.263 Sum_probs=85.3
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCc
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCR 401 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~ 401 (445)
++++++|+++|++++|||+|.+||++..+...+.++||++++++..+. +.+||||+++++.+|+++.+++.. +
T Consensus 48 ~~i~~~L~~~g~~~~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~~~~------~~~GN~~sasip~~L~~~~~~~~~-~ 120 (143)
T d1hnja2 48 HIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTL------DRHGNTSAASVPCALDEAVRDGRI-K 120 (143)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHHHTTCS-C
T ss_pred HHHHHHHHHhhhcccccceEEeccCchHHHHHHHHhCccchhhhhhhh------hhhcccccchHHHHHHHHHHhCCC-C
Confidence 799999999999999999999999999999999999999999998776 889999999999999999887765 6
Q ss_pred eeeEEEe--ecccceeEEEEEEc
Q 013344 402 FGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 402 ~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
.|..+++ +|+|++++++++||
T Consensus 121 ~Gd~vll~g~G~G~s~g~~llrw 143 (143)
T d1hnja2 121 PGQLVLLEAFGGGFTWGSALVRF 143 (143)
T ss_dssp TTCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCEEEEEEEehhhhhEEEEEEC
Confidence 6765544 89999999999886
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.40 E-value=4.3e-13 Score=121.19 Aligned_cols=85 Identities=12% Similarity=0.068 Sum_probs=75.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEe-cCcCcHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v-~~~CsSgl~Al~~A~~~I 152 (445)
...+|+.+|+++||+++|++|+|||.||++++++.. .+..+..++..+|++.++..+++ +.+|+|++++|..|..+|
T Consensus 74 ~a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~--~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l 151 (200)
T d1u0ma1 74 EAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM--MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFC 151 (200)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCC--SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhhheEEEeccCCCC--cchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHH
Confidence 467899999999999999999999999999887654 35566777789999878899998 579999999999999999
Q ss_pred HcCCCCeE
Q 013344 153 KAGFYDIG 160 (445)
Q Consensus 153 ~sG~~~~v 160 (445)
++|..+.+
T Consensus 152 ~~~~~~~v 159 (200)
T d1u0ma1 152 TAYPEANA 159 (200)
T ss_dssp HHSTTCEE
T ss_pred HhCCCCEE
Confidence 99988776
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.40 E-value=1.6e-13 Score=118.02 Aligned_cols=93 Identities=25% Similarity=0.315 Sum_probs=83.1
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCC-CChhcccChhhhHHHHHHHHHHHHHHhcCCCC
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRGRDC 400 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~-gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~ 400 (445)
++++++|+++|++++|||+|.+||++..+...+.++||++++++..+ . +.+|||++++++.+|++..+++..
T Consensus 52 ~~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~~~~------~~~GNt~sasip~~L~~a~~~g~i- 124 (148)
T d1u6ea2 52 DVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDI------EHTGNTSAASIPLAMAELLTTGAA- 124 (148)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEECCTH------HHHCBCGGGHHHHHHHHHHHHTSS-
T ss_pred HHHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcCCCchhhhhhhH------HhhCCCccchHHHHHHHHHHcCCC-
Confidence 78999999999999999999999999999999999999999987765 4 889999999999999999887765
Q ss_pred ceeeEEE-e-ecccceeEEEEEE
Q 013344 401 RFGVISM-C-IGTGMGAAAVFER 421 (445)
Q Consensus 401 ~~G~~~~-~-~G~G~~~a~~l~~ 421 (445)
+.|+.++ + +|+|++|+.+++|
T Consensus 125 ~~Gd~vll~gfG~G~s~~a~llr 147 (148)
T d1u6ea2 125 KPGDLALLIGYGAGLSYAAQVVR 147 (148)
T ss_dssp CTTCEEEEEEEETTTEEEEEEEE
T ss_pred CCCCEEEEEEEchhhhheEEEEe
Confidence 6776544 3 8999999988887
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.38 E-value=2.4e-13 Score=117.52 Aligned_cols=95 Identities=22% Similarity=0.220 Sum_probs=83.1
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCC-CCChhcccChhhhHHHHHHHHHHHHHHhcCCCC
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINV-NGGALAIGHPLGTTGARCVATLLHEMKRRGRDC 400 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~-~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~ 400 (445)
.+++++|+++|++++|||+|.+||++..+...+.++||++++++.+ +. +.+|||++++++.+|+++.+++..
T Consensus 52 ~~i~~~L~~~gl~~~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~~~------~~~GNt~Sasip~~L~~~~~~~~~- 124 (153)
T d1mzja2 52 PAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSRDA------EDTGNTSSASVALALDRLVRSGAV- 124 (153)
T ss_dssp HHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCTTSEECCTH------HHHCBCTTHHHHHHHHHHHHHTSS-
T ss_pred HHHHHHHHHhCCCcccCCEEEEcCCcHHHHHHHHHHhCCCchhcchhhh------hhcCCcccchHHHHHHHHHHcCCC-
Confidence 7899999999999999999999999999999999999999999744 45 889999999999999999888765
Q ss_pred ceeeEEEe--ecccceeEEEEEEcc
Q 013344 401 RFGVISMC--IGTGMGAAAVFERGD 423 (445)
Q Consensus 401 ~~G~~~~~--~G~G~~~a~~l~~~~ 423 (445)
+.|+.+++ +|+|++|+..++++.
T Consensus 125 ~~Gd~ill~~fG~G~s~~~~~l~~~ 149 (153)
T d1mzja2 125 PGGGPALMIGFGAGLSYAGQALLLP 149 (153)
T ss_dssp CTTCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCEEEEEEEchhhhhhEEEEEec
Confidence 66765443 899999977777764
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.32 E-value=2.1e-11 Score=109.26 Aligned_cols=119 Identities=19% Similarity=0.170 Sum_probs=92.4
Q ss_pred CCCCCCeeEEeeCHHHHHhcCC-CeeEEEEEeEEeecC--CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHH
Q 013344 276 QVSDGAGAVLLMKRSVAMRKGL-PILGVFRTFAAVGVD--PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 352 (445)
Q Consensus 276 ~~~DGAaAvvL~s~~~a~~~g~-~~~~~i~~~~~~~~~--p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~ 352 (445)
.++||++++||++.+.|++.+. ++++.+.+++..... +...+.+..++++++|+++|++++|||+++.|...+....
T Consensus 17 ~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~~~~~g~~~~i~~aL~~a~i~~~di~~v~ahgtGt~~~D 96 (194)
T d1tqyb2 17 VPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELD 96 (194)
T ss_dssp CBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHH
T ss_pred eeEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccccchhhhhhhhhhhcccccccccceeeeeccccCccccc
Confidence 3899999999999999998886 588999888776432 2223456778999999999999999999999998887532
Q ss_pred -----HHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 353 -----YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 353 -----~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.+.+| .+.+..+--+-.+||..|++|+.+++.++..|++.
T Consensus 97 ~~E~~al~~~f~--~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g 143 (194)
T d1tqyb2 97 AAEARAIGRVFG--REGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREG 143 (194)
T ss_dssp HHHHHHHHHHHC--TTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHhhhhhhhhh--ccccccccccccccccccccccceehhhhhhhhhc
Confidence 2233344 33344444455689999999999999999999864
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.25 E-value=8.1e-13 Score=113.47 Aligned_cols=99 Identities=17% Similarity=0.238 Sum_probs=84.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDC 400 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~ 400 (445)
..+++++|+++|++++|||+|.+|+++..+...+.++||++++++..+-..+ +.+||+++++++.+|+++.+++..
T Consensus 46 ~~~i~~~l~~~g~~~~did~~~~Hq~~~~i~~~i~~~Lgl~~~k~~~s~~~l---~~~GN~~sasi~~~L~~~~~~~~~- 121 (148)
T d1u0ma2 46 APALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATL---TEYGNIASAVVLDALRRLFDEGGV- 121 (148)
T ss_dssp HHHHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHH---HHTCBCTTHHHHHHHHHHHHSCCC-
T ss_pred HHHHHHHHHHhCCCHHHCCEEEECCCCHHHHHHHHHHhCCChhhhhHHHHHH---HhcCCCCcchHHHHHHHHHHcCCC-
Confidence 4789999999999999999999999999999999999999999986543111 668999999999999999988765
Q ss_pred ceeeEEE-e-ecccceeEEEEEEcc
Q 013344 401 RFGVISM-C-IGTGMGAAAVFERGD 423 (445)
Q Consensus 401 ~~G~~~~-~-~G~G~~~a~~l~~~~ 423 (445)
+.|+.++ + +|+|+++++++++|+
T Consensus 122 ~~Gd~ill~gfG~G~s~~~~llrW~ 146 (148)
T d1u0ma2 122 EEGARGLLAGFGPGITAEMSLGCWQ 146 (148)
T ss_dssp CSSCCCEEEEEETTTEEEEEEEEEE
T ss_pred CCCCEEEEEEEchHhEeeEEEEEEc
Confidence 5555333 2 899999999999986
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.20 E-value=5.8e-11 Score=109.51 Aligned_cols=85 Identities=11% Similarity=-0.038 Sum_probs=70.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEE-ecCcCcHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-VNRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~-v~~~CsSgl~Al~~A~~~I 152 (445)
+..+|+.+|+++||+++|++++|||.||+++++++.. +.+...+...+|+..++..+. ++.+|++++++|..|..+|
T Consensus 101 ~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~--p~~~a~~~~~l~~~~~~~~~~~~~~~C~g~~~al~~A~~~i 178 (235)
T d1bi5a1 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDM--PGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLA 178 (235)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCS--SCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCcc--CccHHHHHHHHhcCCCceEEeeecCccchHHHHHHHHHHHH
Confidence 4568999999999999999999999999999998764 334445555777765666665 5789999999999999999
Q ss_pred HcCCCCeE
Q 013344 153 KAGFYDIG 160 (445)
Q Consensus 153 ~sG~~~~v 160 (445)
++|..+.+
T Consensus 179 ~~~~~~~v 186 (235)
T d1bi5a1 179 ENNKGARV 186 (235)
T ss_dssp HTSTTCEE
T ss_pred HcCCCCeE
Confidence 99998776
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.19 E-value=6.1e-11 Score=107.17 Aligned_cols=121 Identities=20% Similarity=0.240 Sum_probs=95.2
Q ss_pred CCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH
Q 013344 276 QVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 350 (445)
Q Consensus 276 ~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~-----p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~ 350 (445)
.++||++++||.+.+.|++.+.++++.+.+++..... +...+.....+++++|++++++++||||++.|...+..
T Consensus 18 v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~~~~i~~ie~hgtGt~~ 97 (205)
T d1tqya2 18 VLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQ 97 (205)
T ss_dssp CEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHH
T ss_pred eeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcCCccceeeeecccccccc
Confidence 3799999999999999999999999999988775422 22233445689999999999999999999999988876
Q ss_pred H-----HHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 351 F-----VYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 351 ~-----~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
. ..+.+.++-..+++..+.-+-.+||..|++|+.+++.++..|++.
T Consensus 98 ~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g 148 (205)
T d1tqya2 98 NDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHG 148 (205)
T ss_dssp HHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHC
T ss_pred CchhHHHHHHHhhccccCCceeeeecccccccccccchhHHHHHHHHHhCC
Confidence 2 233334443344555555566699999999999999999999864
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=99.19 E-value=3.1e-12 Score=111.96 Aligned_cols=99 Identities=11% Similarity=0.042 Sum_probs=83.3
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..++++..+|+..|++++|++. ++++||.+++++.++++. .+..+..+...+|++..+.+++++.+
T Consensus 34 ~~~Gi~~r~~-~~~~E~~~~ma~~Aa~~al~~~--~~~~id~li~~t~~~~~~-~p~~a~~v~~~lg~~~~~~~~dv~~~ 109 (166)
T d1xpma1 34 IGIGQTEMAV-SPVNQDIVSMGANAAKDIITDE--DKKKIGMVIVATESAVDA-AKAAAVQIHNLLGIQPFARCFEMKEA 109 (166)
T ss_dssp TTTCCSEEEE-CCTTCCHHHHHHHHHHTTCCHH--HHHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEEST
T ss_pred HhcCcEEEEe-CCCccCHHHHHHHHHHhhhccc--cCCCCCeEEEeccccccc-cchhHHHHHHhhccccceEEeeeccc
Confidence 3466666543 4568999999999999999876 478999999999998876 55567777779999878999999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeE
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
|+++++||..|..+|++|..+.+
T Consensus 110 C~g~~~al~~A~~~i~~~~~~~a 132 (166)
T d1xpma1 110 CYAATPAIQLAKDYLATRPNEKV 132 (166)
T ss_dssp TTTHHHHHHHHHHHHTTCTTCEE
T ss_pred HHHHHHHHHHHhhHHhcCCCCeE
Confidence 99999999999999999987654
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=99.01 E-value=7.9e-11 Score=101.57 Aligned_cols=99 Identities=14% Similarity=0.151 Sum_probs=79.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCC--
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-- 398 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~-- 398 (445)
...++++|+++|++.+|||+|.+|+++..+...+.++|||+++++..+--.+ +.+|||++++|+.+|+++++.+.
T Consensus 46 ~~~~~~~l~~~~~~~~did~~i~Hqgg~~Ild~v~~~L~L~~~k~~~s~~~l---~~~GN~sSasip~~L~~~~~~~~~~ 122 (156)
T d1u0ua2 46 ENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVM---SEYGNMSSACVHFILDQTRKASLQN 122 (156)
T ss_dssp HHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHH---HHHCBCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCceEeecCCcHHHHHHHHHHhCCCcccchhhHHHH---hhcCCCCcccHHHHHHHHHHhhhhc
Confidence 3788999999999999999999999999999999999999999987664222 67899999999999998864421
Q ss_pred --C--Cceee-EE-EeecccceeEEEEEEc
Q 013344 399 --D--CRFGV-IS-MCIGTGMGAAAVFERG 422 (445)
Q Consensus 399 --~--~~~G~-~~-~~~G~G~~~a~~l~~~ 422 (445)
. .+.+. .+ +.+|+|+++.++|+|.
T Consensus 123 ~~~~~~~~~~~~~~~gfG~Glt~~~~llr~ 152 (156)
T d1u0ua2 123 GCSTTGEGLEMGVLFGFGPGLTIETVVLKS 152 (156)
T ss_dssp TCSBSBTTBSEEEEEEEETTTEEEEEEEEE
T ss_pred cCCCcCCCCCEEEEEEECHHHhHHHHHHee
Confidence 0 01122 23 3399999998777764
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=99.00 E-value=8.7e-11 Score=101.60 Aligned_cols=100 Identities=19% Similarity=0.276 Sum_probs=80.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC---
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--- 397 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~--- 397 (445)
...++++|+++|++.+|||+|.+|+++..+...+.++||++++++..+--.+ +.||||++++|+.+|+++.++.
T Consensus 50 ~~~v~~~l~~~gl~~~di~~~v~Hqgg~~Ild~i~~~L~L~~~~l~~s~~vl---~~yGNtSSaSI~~vL~~~~~~~~~~ 126 (160)
T d1ee0a2 50 ENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVL---SEYGNLISACVLFIIDEVRKRSMAE 126 (160)
T ss_dssp HHHHHHHHGGGTCCCGGGSEEEECCSSHHHHHHHHHHTTCCTTTTHHHHHHH---HHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhccCCccccceEeecCCcHHHHHHHHHHcCCCHHHHHHHHHHH---HHhCCCccchHHHHHHHHHhhhhhc
Confidence 3788999999999999999999999999999999999999999987654222 6789999999999999877542
Q ss_pred CCCcee----e-EEEeecccceeEEEEEEcc
Q 013344 398 RDCRFG----V-ISMCIGTGMGAAAVFERGD 423 (445)
Q Consensus 398 ~~~~~G----~-~~~~~G~G~~~a~~l~~~~ 423 (445)
+..+.| . ..+.+|+|++++.+|+|.-
T Consensus 127 ~~~~~g~~~d~~ll~afG~Glt~~~~llr~~ 157 (160)
T d1ee0a2 127 GKSTTGEGLDCGVLFGFGPGMTVETVVLRSV 157 (160)
T ss_dssp TCSBTBTTBSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCCCcCCCcCEEEEEEEChHHHHHHHHHeec
Confidence 100111 2 2333999999988887753
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.00 E-value=7.4e-11 Score=101.44 Aligned_cols=99 Identities=22% Similarity=0.319 Sum_probs=80.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC---
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--- 397 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~--- 397 (445)
...++++|+++|++.+|||+|.+|+++..+...+.++|||+++++..+--.+ +.||||++++|+.+|++++++.
T Consensus 45 ~~~~~~~l~~~gl~~~di~~~v~Hqgg~~Ild~v~~~L~L~~~~~~~s~~vl---~~yGN~SSasi~~vL~~~~~~~~~~ 121 (154)
T d1bi5a2 45 TKALVEAFEPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVL---SEYGNMSSACVLFILDEMRKKSTQN 121 (154)
T ss_dssp HHHHHHHHGGGTCCCTTSSEEEECCSSHHHHHHHHHHHTCCGGGGHHHHHHH---HHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCccccceEeeccccHHHHHHHHHHhCCCHHHHHHhHHHH---HhcCCCCcccHHHHHHHHHHhhhcc
Confidence 3788999999999999999999999999999999999999999998763222 6789999999999999887542
Q ss_pred CCCcee----e-EEEeecccceeEEEEEEc
Q 013344 398 RDCRFG----V-ISMCIGTGMGAAAVFERG 422 (445)
Q Consensus 398 ~~~~~G----~-~~~~~G~G~~~a~~l~~~ 422 (445)
+..+.| . ..+.||+|+++.++++|.
T Consensus 122 ~~~~~g~~~~~~~~~aFG~Glt~~~~llr~ 151 (154)
T d1bi5a2 122 GLKTTGEGLEWGVLFGFGPGLTIETVVLRS 151 (154)
T ss_dssp TCSBTTTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred CCcccCCCcCEEEEEEEchHHhHHHHHHhc
Confidence 110111 1 233499999998888875
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=98.95 E-value=1.3e-09 Score=101.15 Aligned_cols=85 Identities=21% Similarity=0.268 Sum_probs=69.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCcc-------------------------cchHHHHHHHHcC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ-------------------------RASECRMAAFYAG 124 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~~-------------------------~~~~a~~~~~~lG 124 (445)
....++..++.+||+++|+++++++ +|++|+..+.... ....+..++..+|
T Consensus 70 ~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~g 149 (249)
T d1j3na1 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (249)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcC
Confidence 4567899999999999999988776 6888876543210 0123446777889
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
+ ..|.++++++|+|++.||.+|+++|++|++|.+
T Consensus 150 l--~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~a 183 (249)
T d1j3na1 150 F--TGPSSTVVTACATGADALGSALRMIQLGEADLV 183 (249)
T ss_dssp C--CSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEE
T ss_pred C--CCCccccccccchHHHHHHHHHHHHHcCCCCee
Confidence 8 589999999999999999999999999999998
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=98.91 E-value=3.1e-09 Score=98.41 Aligned_cols=84 Identities=12% Similarity=0.085 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCcc-------------------------cchHHHHHHHHcCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ-------------------------RASECRMAAFYAGF 125 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~~-------------------------~~~~a~~~~~~lGl 125 (445)
...|+..++++||+++|+++++++ .+++|+....... ...++..++..+|+
T Consensus 72 ~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 151 (250)
T d2gfva1 72 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCC
Confidence 467899999999999999888776 4777775433210 01235567778999
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
..|+++|+++|+|+++||..|+++|++|++|++
T Consensus 152 --~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~ 184 (250)
T d2gfva1 152 --RGPSISIATAQTSGVHNIGHAARIIAYGDADVM 184 (250)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEE
T ss_pred --CCCccccccccchhhhhhHHHHHHHHcCCcchh
Confidence 589999999999999999999999999999998
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=98.83 E-value=3.3e-08 Score=90.99 Aligned_cols=84 Identities=14% Similarity=0.202 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCcc-------------------------cchHHHHHHHHcCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ-------------------------RASECRMAAFYAGF 125 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~~-------------------------~~~~a~~~~~~lGl 125 (445)
...++..++.+||+++|++++.+. .+++|+....... ...++..++..+|+
T Consensus 72 ~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (250)
T d1e5ma1 72 FCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccC
Confidence 457899999999999999887765 4777765432210 01234556668898
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
+.|.++++++|+|++.||.+|.++|++|++|.+
T Consensus 152 --~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~ 184 (250)
T d1e5ma1 152 --KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAM 184 (250)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEE
T ss_pred --CCCCccccccchhhhhhhHHHhhcccCCccccc
Confidence 689999999999999999999999999999998
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.75 E-value=3.2e-08 Score=85.10 Aligned_cols=95 Identities=20% Similarity=0.261 Sum_probs=72.6
Q ss_pred eeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----HHHH-HHcCCCCCCcCCC
Q 013344 299 ILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----VYCR-NKLGLDPEKINVN 368 (445)
Q Consensus 299 ~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~~~~-e~LGl~~~~vn~~ 368 (445)
++++++|++... ..|...+.+...+++++|+++|++++||||++.|...+... ...+ +.+| +++..+
T Consensus 2 Iyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg---~~~~v~ 78 (158)
T d1ox0a2 2 ILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLG---KEVPVS 78 (158)
T ss_dssp CCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHC---SSSEEE
T ss_pred EEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcC---CcccCc
Confidence 678999888764 23444556667899999999999999999999999987752 2222 3344 345444
Q ss_pred CChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 369 GGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 369 gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.-+-.+||..|++|+.+++.++..|+..
T Consensus 79 s~Ks~iGH~~~asG~~~l~~~l~~l~~g 106 (158)
T d1ox0a2 79 STKSFTGHLLGAAGAVEAIVTIEAMRHN 106 (158)
T ss_dssp CTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred Ccccccccchhhhhhhhhcccccccccc
Confidence 4455699999999999999999999864
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=98.71 E-value=3.6e-08 Score=85.04 Aligned_cols=99 Identities=21% Similarity=0.252 Sum_probs=73.9
Q ss_pred CeeEEEEEeEEeec-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----HHHH-HHcCCCCCCcCC
Q 013344 298 PILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----VYCR-NKLGLDPEKINV 367 (445)
Q Consensus 298 ~~~~~i~~~~~~~~-----~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~~~~-e~LGl~~~~vn~ 367 (445)
++++++.+++.... .|...+.+...+++++|+++|++++||||++.|...+... ...+ +.++-...++..
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v 80 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceE
Confidence 47889999887642 2334456667899999999999999999999999888753 2233 334433334444
Q ss_pred CCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 368 NGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 368 ~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+.-+-.+||..|++|+.+++.++..|+..
T Consensus 81 ~s~K~~~GH~~~AsG~~~l~~~l~~~~~g 109 (161)
T d1e5ma2 81 SSTKSMTGHLLGGSGGIEAVATVMAIAED 109 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred EecccccccccccchhhHHHHhHHhcccC
Confidence 44455689999999999999999999864
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=98.60 E-value=1.1e-07 Score=81.80 Aligned_cols=99 Identities=19% Similarity=0.278 Sum_probs=73.8
Q ss_pred CeeEEEEEeEEeec-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHH-----HHHHHcCCCCCCcCC
Q 013344 298 PILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV-----YCRNKLGLDPEKINV 367 (445)
Q Consensus 298 ~~~~~i~~~~~~~~-----~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~-----~~~e~LGl~~~~vn~ 367 (445)
++++++.+++.... .|...+.+...+++++|+++|++++||||++.|...+.... .+.+.++-...++..
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccccccee
Confidence 47888998887542 23344556678999999999999999999999998887532 233334433344444
Q ss_pred CCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 368 NGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 368 ~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+.-+-.+||..+++|+.+++.++..|+..
T Consensus 81 ~s~Ks~~GH~~~AsG~~~li~~ll~l~~~ 109 (161)
T d2gfva2 81 SSTKSMTGHLLGAAGAVESIYSILALRDQ 109 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHSC
T ss_pred ccccccccccHHHHHHHHHHHHHHHhcCC
Confidence 44455699999999999999999999853
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=98.59 E-value=8.4e-08 Score=82.50 Aligned_cols=99 Identities=20% Similarity=0.293 Sum_probs=73.0
Q ss_pred CeeEEEEEeEEeec-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHH----H-HHHHcCCCCCCcCC
Q 013344 298 PILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV----Y-CRNKLGLDPEKINV 367 (445)
Q Consensus 298 ~~~~~i~~~~~~~~-----~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~----~-~~e~LGl~~~~vn~ 367 (445)
++++++.+++.... .|...+.+...+++++|+++|++++||||++.|...+.... . +.+.++-...++..
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMV 80 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceE
Confidence 47889999887642 24445566778999999999999999999999998887522 2 22223222233444
Q ss_pred CCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 368 NGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 368 ~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
..-+-.+||..+++|+.+++.++..|+++
T Consensus 81 ~s~K~~~GH~~~asG~~~li~~~~~l~~~ 109 (159)
T d1j3na2 81 SSTKSMIGHLLGAAGAVEAIATVQALYHG 109 (159)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred ecccccccccccccccchhhhhhhHhhCC
Confidence 44455699999999999999999999764
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.51 E-value=2.2e-07 Score=85.38 Aligned_cols=85 Identities=11% Similarity=0.098 Sum_probs=63.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCC-----CcEEEEeccCCCcc--------------------------cchHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEV-----GDIVVGTVLAPGSQ--------------------------RASECRMAAFY 122 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dI-----d~vi~g~~~~~~~~--------------------------~~~~a~~~~~~ 122 (445)
....+...++.+|+.++++.++.. =++++|+....... ...++..++..
T Consensus 70 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (253)
T d2vbaa1 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (253)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred hhhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccc
Confidence 345688889999999999864321 14666665432110 01234456668
Q ss_pred cCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE
Q 013344 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 123 lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
+|+ +.|.++++++|+|++.||..|+++|++|++|++
T Consensus 150 ~g~--~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~a 185 (253)
T d2vbaa1 150 FKI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIV 185 (253)
T ss_dssp TTC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEE
T ss_pred cCc--ccceeeeeccchhHHHHHHHHHHhcchhcccee
Confidence 888 689999999999999999999999999999988
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=98.33 E-value=1.5e-06 Score=74.60 Aligned_cols=97 Identities=18% Similarity=0.245 Sum_probs=69.9
Q ss_pred eEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----HH-HHHHcCCC--CCCcCC
Q 013344 300 LGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----VY-CRNKLGLD--PEKINV 367 (445)
Q Consensus 300 ~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~~-~~e~LGl~--~~~vn~ 367 (445)
++++.|++... ..|...+.+...+++++|++++++++||||+|.|...+... .. +.+.++-. ..++..
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i 80 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF 80 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence 46788887654 23444445556789999999999999999999999888753 22 22333321 123444
Q ss_pred CCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 368 NGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 368 ~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+.-+-.+||..+++|+.+++.++..|++.
T Consensus 81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~ 109 (161)
T d2ix4a2 81 SSTKGATGHLLGAAGAVEAIFSILAIHHG 109 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred eccccccCCccchHHHHHHHHHHHHHhcC
Confidence 44455689999999999999999999864
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=98.32 E-value=7.1e-07 Score=82.41 Aligned_cols=85 Identities=14% Similarity=0.173 Sum_probs=60.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCC-----CCcEEEEeccCCCc-------------------------ccchHHHHHHHHc
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSE-----VGDIVVGTVLAPGS-------------------------QRASECRMAAFYA 123 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~d-----Id~vi~g~~~~~~~-------------------------~~~~~a~~~~~~l 123 (445)
.....+..|..+|+.+++....+ ...+.......... .....+..++..+
T Consensus 87 ~~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 166 (270)
T d2ix4a1 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (270)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchhHHHHHHHh
Confidence 34567777888899988764332 12333333221110 0012455677789
Q ss_pred CCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE
Q 013344 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 124 Gl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
|+ +.|.++|+.+|+|++.||.+|+++|++|++|.+
T Consensus 167 ~l--~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~a 201 (270)
T d2ix4a1 167 GF--QGPNHAAVTACATGAHSIGDATRMIQFGDADVM 201 (270)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEE
T ss_pred CC--CCCCcccccccchhhHHHHHHHHHHHcCCCCee
Confidence 99 589999999999999999999999999999988
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.23 E-value=1.8e-06 Score=76.82 Aligned_cols=83 Identities=14% Similarity=0.200 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCcc-------------------------cchHHHHHHHHcCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ-------------------------RASECRMAAFYAGF 125 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~~-------------------------~~~~a~~~~~~lGl 125 (445)
...|+..++.+||+++|+++++++ .+++|+..+.... ...++..++..+|+
T Consensus 70 ~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 149 (208)
T d1tqyb1 70 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM 149 (208)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred ccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccc
Confidence 467999999999999999998876 4778875432210 01235567789999
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
+.|.++++++|+|++.||..|+++|++| +|++
T Consensus 150 --~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~ 181 (208)
T d1tqyb1 150 --RGPSSALVAEQAGGLDALGHARRTIRRG-TPLV 181 (208)
T ss_dssp --CSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEE
T ss_pred --cceeeeccccccHHHHHHHHHHHHHHcC-CCEE
Confidence 5899999999999999999999999999 8988
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.18 E-value=2.3e-06 Score=76.49 Aligned_cols=86 Identities=21% Similarity=0.375 Sum_probs=67.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeccCCCcc-------------------------------cchHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ-------------------------------RASECR 117 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~----vi~g~~~~~~~~-------------------------------~~~~a~ 117 (445)
.+...|+..|+++||+++|+++++++. +++++....... ...++.
T Consensus 69 ~~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 148 (216)
T d1tqya1 69 DRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPA 148 (216)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHH
T ss_pred CcchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHH
Confidence 346789999999999999999887763 555554322110 012356
Q ss_pred HHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE
Q 013344 118 MAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (445)
Q Consensus 118 ~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v 160 (445)
.++..+|+ ..|.+++..+|+|+++||.+|.++|++|++|++
T Consensus 149 ~ia~~~g~--~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ 189 (216)
T d1tqya1 149 EVAWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVM 189 (216)
T ss_dssp HHHHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEE
T ss_pred HHHHhcCc--cccceeeccccchHHHHHHHHHHHHHcCCCCEE
Confidence 67778999 589999999999999999999999999999988
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=97.68 E-value=0.00021 Score=59.99 Aligned_cols=92 Identities=16% Similarity=0.182 Sum_probs=63.6
Q ss_pred eEEEEEeEEeecCC---CCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----H-HHHHHcCCCCCCcCCCCCh
Q 013344 300 LGVFRTFAAVGVDP---AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----V-YCRNKLGLDPEKINVNGGA 371 (445)
Q Consensus 300 ~~~i~~~~~~~~~p---~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~-~~~e~LGl~~~~vn~~gG~ 371 (445)
++++.|++...... ...+.+...+++++|+.+ +.||||++.|...+... . .+.+.+|- +.+..+.-+
T Consensus 1 Yaei~G~g~~~Dg~~~taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~--~~~~v~s~K 75 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGD--KSPAISATK 75 (151)
T ss_dssp CEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTT--CCCEEECTH
T ss_pred CEEEEEEEEecCCCCCCCcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCC--CCcccccch
Confidence 46788887654211 123456678999999765 67999999999887753 2 33344453 233333334
Q ss_pred hcccChhhhHHHHHHHHHHHHHHhc
Q 013344 372 LAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 372 la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
-.+||..|++|+.+++.++..|+..
T Consensus 76 ~~~GH~~~asG~~~l~~~~~~l~~~ 100 (151)
T d2vbaa2 76 AMTGHSLGAAGVQEAIYSLLMLEHG 100 (151)
T ss_dssp HHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred hhccccccchhhhhhhHHHHHHHcC
Confidence 5589999999999999999999763
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.57 E-value=0.012 Score=55.96 Aligned_cols=79 Identities=15% Similarity=0.083 Sum_probs=52.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
..|++++|+++|++++|||++.+.- .......++.++||+.+.-..... +-.||+|...-+.....+.+.
T Consensus 97 ~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~------~~~gC~g~~~aL~~A~~~l~s 170 (372)
T d1teda_ 97 VDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVV------NFMGCAAAMNALGTATNYVRA 170 (372)
T ss_dssp HHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEE------ESCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEeec------cccCccHHHHHHHHHHHHHhc
Confidence 3899999999999999999998631 123456688999999875332211 113566666666666666665
Q ss_pred CCCCceeeEE
Q 013344 397 GRDCRFGVIS 406 (445)
Q Consensus 397 ~~~~~~G~~~ 406 (445)
+.. ++.+++
T Consensus 171 g~~-~~~LVV 179 (372)
T d1teda_ 171 HPA-MKALVV 179 (372)
T ss_dssp STT-CEEEEE
T ss_pred CCC-ccceee
Confidence 543 555544
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=95.53 E-value=0.014 Score=50.64 Aligned_cols=79 Identities=19% Similarity=0.229 Sum_probs=54.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
..|++++|+++|++++|||++..... .......+.++||+.+.-..... +..|++|...-+.+...+.+.
T Consensus 80 ~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~~~~i------~~~gC~g~~~al~~A~~~l~~ 153 (200)
T d1u0ma1 80 PAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPI------AQLGCAAGGAAINRAHDFCTA 153 (200)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEEE------CSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhhheEEEeccCCCCcchhHHHHHHHHhcCCCeeEecc------ccchhhHHHHHHHHHHHHHHh
Confidence 38999999999999999999987422 23345677899999875433221 225777777777777777666
Q ss_pred CCCCceeeEE
Q 013344 397 GRDCRFGVIS 406 (445)
Q Consensus 397 ~~~~~~G~~~ 406 (445)
+.. +..+++
T Consensus 154 ~~~-~~vLvv 162 (200)
T d1u0ma1 154 YPE-ANALIV 162 (200)
T ss_dssp STT-CEEEEE
T ss_pred CCC-CEEEEE
Confidence 653 554443
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=95.27 E-value=0.024 Score=50.39 Aligned_cols=72 Identities=17% Similarity=0.108 Sum_probs=49.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
..|++++|+++|++++|||++.+.- ......-.+.++|++.+.-....- +..|++|....+.....+.+.
T Consensus 107 ~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~~~~~~~~~~~------~~~~C~g~~~al~~A~~~i~~ 180 (235)
T d1bi5a1 107 KEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMM------YQQGCFAGGTVLRLAKDLAEN 180 (235)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEE------ESCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHhcCCCceEEee------ecCccchHHHHHHHHHHHHHc
Confidence 3899999999999999999998742 233345567778887765332221 224677766666666776666
Q ss_pred CC
Q 013344 397 GR 398 (445)
Q Consensus 397 ~~ 398 (445)
+.
T Consensus 181 ~~ 182 (235)
T d1bi5a1 181 NK 182 (235)
T ss_dssp ST
T ss_pred CC
Confidence 54
|
| >d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=94.64 E-value=0.02 Score=50.35 Aligned_cols=90 Identities=11% Similarity=0.001 Sum_probs=58.5
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCC---------CcCCCCChhcccChhhhHHHHHHHHHHHH
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE---------KINVNGGALAIGHPLGTTGARCVATLLHE 392 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~---------~vn~~gG~la~Gh~~GatG~~~i~~~l~~ 392 (445)
.+.+...++.|.+++|+|++.+|.+|..+.....+.|..... ++-++- .+..-.||+.++++...|..
T Consensus 44 ~~~~~~~~~~g~~~~dfd~~~fH~P~~km~~ka~~~l~~~~~~~~~~~~~~~~~~s~---~~~~~iGN~YTaSlyl~L~S 120 (221)
T d1xpma2 44 QSWNEYAKRQGKSLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAV---DYNRYVGNIYTGSLYLSLIS 120 (221)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHT---TGGGGTCCCGGGHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhhheEEeecCchhhHHHHHHHHHhccchhhHHHHHHhhhhHH---HHHHhcCCcchHHHHHHHHh
Confidence 566777889999999999999999999999988887754322 111110 01133566666677777776
Q ss_pred HHhcCCCCceeeEEEe--eccccee
Q 013344 393 MKRRGRDCRFGVISMC--IGTGMGA 415 (445)
Q Consensus 393 L~~~~~~~~~G~~~~~--~G~G~~~ 415 (445)
|...+.. ..|..+.+ .|+|..+
T Consensus 121 ll~~~~~-~~G~rIglfSYGSG~~a 144 (221)
T d1xpma2 121 LLENRDL-QAGETIGLFSYGSGSVG 144 (221)
T ss_dssp HHHHSCC-CTTCEEEEEEEETTTEE
T ss_pred hhccccC-CCCCEEEEEEecCCcce
Confidence 6655432 44554444 5666544
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=94.13 E-value=0.04 Score=46.38 Aligned_cols=76 Identities=14% Similarity=0.152 Sum_probs=50.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..|++++|+++|++++|||++.+.-. .......+.++||.... ++--..+++|...-+.+...+.+
T Consensus 54 ~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~~~~---------~~di~~~C~g~~~al~~a~~~~~ 124 (172)
T d1ub7a1 54 FKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLKAF---------AYDLLAGCPGWIYALAQAHALVE 124 (172)
T ss_dssp HHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTCCCE---------EEEEECSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhccCcc---------ceeehhccccHHHHHHHHhhhhh
Confidence 47999999999999999999987532 22345677888985332 22233466776666666666666
Q ss_pred cCCCCceeeEE
Q 013344 396 RGRDCRFGVIS 406 (445)
Q Consensus 396 ~~~~~~~G~~~ 406 (445)
.+.. ++.+++
T Consensus 125 ~~~~-~~~Lvv 134 (172)
T d1ub7a1 125 AGLA-QKVLAV 134 (172)
T ss_dssp TTSC-SEEEEE
T ss_pred cCCc-ceeEEe
Confidence 5543 444433
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=93.53 E-value=0.086 Score=44.27 Aligned_cols=78 Identities=18% Similarity=0.262 Sum_probs=51.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h-----~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..|++++|+++|++++|||++.+. +........+.++||+..-... . -..+++|...-+.....+.+
T Consensus 56 ~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~~~~~~-d-------i~~~C~g~~~al~~A~~~i~ 127 (174)
T d1hnja1 56 FEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAF-D-------VAAACAGFTYALSVADQYVK 127 (174)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSCEE-E-------ECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCCchhhh-h-------hhhhhccHHHHHHHHHHHHh
Confidence 489999999999999999999874 2344567788899999642211 1 12356665555555566666
Q ss_pred cCCCCceeeEEE
Q 013344 396 RGRDCRFGVISM 407 (445)
Q Consensus 396 ~~~~~~~G~~~~ 407 (445)
.+.. ++.+++.
T Consensus 128 sg~~-~~~Lvv~ 138 (174)
T d1hnja1 128 SGAV-KYALVVG 138 (174)
T ss_dssp TTSC-SEEEEEE
T ss_pred cCCc-ceeEEEe
Confidence 6553 5555443
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=90.74 E-value=0.21 Score=42.03 Aligned_cols=76 Identities=18% Similarity=0.217 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..|++++|+++|++++|||++.++-. .......+.+.||.+.-.. .. =..|++|...-+.....+.+
T Consensus 63 ~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~~~~~-~D-------v~~~C~g~~~aL~~A~~~i~ 134 (181)
T d1mzja1 63 VAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAGG-FD-------LSAACAGFCHALSIAADAVE 134 (181)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCEE-EE-------EECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCCCccc-ee-------HHhhhccHHHHHHHHhCHhh
Confidence 48999999999999999999887522 2234456677888653221 11 11366666665555555555
Q ss_pred cCCCCceeeE
Q 013344 396 RGRDCRFGVI 405 (445)
Q Consensus 396 ~~~~~~~G~~ 405 (445)
.+.. +..++
T Consensus 135 ~~~~-~~~Lv 143 (181)
T d1mzja1 135 SGGS-RHVLV 143 (181)
T ss_dssp HSSC-SCEEE
T ss_pred cCCC-ceeEE
Confidence 5443 44443
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=89.50 E-value=0.26 Score=40.06 Aligned_cols=70 Identities=13% Similarity=0.120 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEE-e----cCcCcHHHHHHHHHHH
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-V----NRQCSSGLQAVADVAA 150 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~-v----~~~CsSgl~Al~~A~~ 150 (445)
.....++++++|+++|++++|||.+++-+ . ....-..++..+|++.+....+ + |..++|-..+|..+.+
T Consensus 47 ~~~v~~~i~~~L~~~gl~~~dId~~i~Hq---a---~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a~~ 120 (148)
T d1u6ea2 47 AFKMGDVGRRAMDAAGVRPDQIDVFVPHQ---A---NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLT 120 (148)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEECC---S---CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccccEEEecc---c---cHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHHHH
Confidence 34456788999999999999999988632 2 1234566777899975443333 2 2334444556665544
Q ss_pred H
Q 013344 151 A 151 (445)
Q Consensus 151 ~ 151 (445)
.
T Consensus 121 ~ 121 (148)
T d1u6ea2 121 T 121 (148)
T ss_dssp H
T ss_pred c
Confidence 3
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=85.90 E-value=0.36 Score=39.17 Aligned_cols=52 Identities=17% Similarity=0.153 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEe
Q 013344 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV 134 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v 134 (445)
....++++++|+++|++++|||.+++-. . .......+...+|++.+....++
T Consensus 47 ~~vp~~i~~~L~~~g~~~~dId~~i~Hq---a---~~~~~~~i~~~lgi~~~k~~~~~ 98 (149)
T d1ub7a2 47 RVMNTATLEAIEKAGLTPEDIRLFVPHQ---A---NLRIIDAARERLGLPWERVAVNV 98 (149)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC---S---CHHHHHHHHHTTTCCGGGBCCCH
T ss_pred HHHHHHHHHHHHhhccccccccEEEeec---c---chHHHHHHHhhccchhhHHHHHH
Confidence 3446788999999999999999988522 1 12345666678999765433333
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=80.43 E-value=1.4 Score=35.08 Aligned_cols=68 Identities=19% Similarity=0.143 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEe----cCcCcHHHHHHHHHHH
Q 013344 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV----NRQCSSGLQAVADVAA 150 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v----~~~CsSgl~Al~~A~~ 150 (445)
....++++++|+++|++++|||.+++-. . ....-..++..+|++.+....++ |.+++|-..+|..+..
T Consensus 44 ~~~~~~i~~~L~~~g~~~~dId~~i~Hq---~---~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~~~ 115 (143)
T d1hnja2 44 TELAHIVDETLAANNLDRSQLDWLVPHQ---A---NLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVR 115 (143)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEECC---S---CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHhhhcccccceEEecc---C---chHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHHHH
Confidence 3446788999999999999999988522 1 12345566778999854333333 2344455555554443
|