Citrus Sinensis ID: 013372


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440----
MDENSALIEQILREDELEYRGLSRSYNKDEEWQTVSYKKRHSKQPNSDNSLPDRRPDDGATTSDVFRAIEEHSEERRRRMSVPQVATPVTGEGSKRHSDEDDDSDAEVSAAVVEVKKVKQKKPKKPKVTVSEAAARIDAGDLGAFLVDITGSYEKQEDIQLMRFADYFGRAFASVSSSQFPWLKTFRESTVAKMVDIPLSHVPEDVYKMSVDWLNQRSFDALGSFVLWSLDSILADLASHQGTGKSSKKVVQQASSKSQVAIFVVLAMVLRRKPDVLISLLPIKRENPKYQGQDKLPVTAWIIAQTAQGDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERILSLPKARTILINGAVKKGERLVPPSALEVLMRVTFPAPSLRIKATERFEAIYPILKEVALAGSPGSKAMKQVAQHILTIAIKAAGEGLINSSRPPFW
cccHHHHHHHHHHcccccccccccccccccccEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccccHHccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccccHHHcccccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccc
ccccHHHHHHHHcccccEEcccccccccccccEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHcccccccccccccccHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccHHcccHHHHcccccHHHHcccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHcHHHHHccccccccccHHHHHEHHHHHHccHHHHHHHHHHHHcHHEcccccccHHHHHHHHHHHHHHHccccccEEEEcccccccccccccHHHHHHHHHccccccHcHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccc
MDENSALIEQILREDEleyrglsrsynkdeewqtvsykkrhskqpnsdnslpdrrpddgattsDVFRAIEEHSEERrrrmsvpqvatpvtgegskrhsdedddsdAEVSAAVVEVKKvkqkkpkkpkvtvsEAAARIDAGDLGAFLVDItgsyekqedIQLMRFADYFGRAfasvsssqfpwlkTFRESTVAKMVdiplshvpedvYKMSVDWLNQRSFDALGSFVLWSLDSILADLashqgtgkssKKVVQQASSKSQVAIFVVLAMVLRRkpdvlisllpikrenpkyqgqdklpVTAWIIAQTAQGDLAVGLYMWVRVLLPmlsgksscnpqaRDSILQLVERILSLPKARTILINGavkkgerlvppsaLEVLMRvtfpapslrikATERFEAIYPILKEValagspgskAMKQVAQHILTIAIKAAgeglinssrppfw
MDENSALIEqilredeleyrglsrsynkdeewqtvsykkrhskqpnsdnslpdrrpddgaTTSDVFRAIEehseerrrrmsvpqvatpvtgegskrhsdedddsdAEVSAAVVevkkvkqkkpkkpkvtvseaaaridagdlGAFLVDITGSYEKQEDIQLMRFADYFGRAFasvsssqfpwLKTFRESTVAKMVDIPLSHVPEDVYKMSVDWLNQRSFDALGSFVLWSLDSILADLASHQGTGKSSKKVVQQASSKSQVAIFVVLAMVLRRKPDVLISllpikrenpkyqgqdKLPVTAWIIAQTAQGDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERILSLPKARTILingavkkgerlvppsaLEVLMRVTFPAPSLRIKATERFEAIYPILKEVALAGSPGSKAMKQVAQHILTIAIKaageglinssrppfw
MDENSALIEQILREDELEYRGLSRSYNKDEEWQTVSYKKRHSKQPNSDNSLPDRRPDDGATTSDVFRAIeehseerrrrMSVPQVATPVTGEGSKRHsdedddsdaevsaavvevkkvkqkkpkkpkvTVSEAAARIDAGDLGAFLVDITGSYEKQEDIQLMRFADYFGRAFASVSSSQFPWLKTFRESTVAKMVDIPLSHVPEDVYKMSVDWLNQRSFDALGSFVLWSLDSILADLASHQGTGksskkvvqqassksqvaIFVVLAMVLRRKPDVLISLLPIKRENPKYQGQDKLPVTAWIIAQTAQGDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERILSLPKARTILINGAVKKGERLVPPSALEVLMRVTFPAPSLRIKATERFEAIYPILKEVALAGSPGSKAMKQVAQHILTIAIKAAGEGLINSSRPPFW
*************************************************************************************************************************************AARIDAGDLGAFLVDITGSYEKQEDIQLMRFADYFGRAFASVSSSQFPWLKTFRESTVAKMVDIPLSHVPEDVYKMSVDWLNQRSFDALGSFVLWSLDSILADLA********************QVAIFVVLAMVLRRKPDVLISLLPIKRENPKYQGQDKLPVTAWIIAQTAQGDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERILSLPKARTILINGAVKKGERLVPPSALEVLMRVTFPAPSLRIKATERFEAIYPILKEVALAGSPGSKAMKQVAQHILTIAIKAAGEGL*********
*****AL**QILR**************************************************************************************************************************RIDAGDLGAFLVDITGSYEKQEDIQLMRFADYFGRAFASVSSSQFPWLKTFRESTVAKMVDIPLSHVPEDVYKMSVDWLNQRSFDALGSFVLWSLDSILADLA****************SSKSQVAIFVVLAMVLRRKPDVLISLLPIKR*******QDKLPVTAWIIAQTAQGDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERILSLPKARTILINGAVKKGERLVPPSALEVLMRVTFP************EAIYPILKEVALA*********QVAQHILTIAIKAAG********PP**
MDENSALIEQILREDELEYRGLSRSYNKD**************************PDDGATTSDVFRAIEE*************************************SAAVVEVK***************EAAARIDAGDLGAFLVDITGSYEKQEDIQLMRFADYFGRAFASVSSSQFPWLKTFRESTVAKMVDIPLSHVPEDVYKMSVDWLNQRSFDALGSFVLWSLDSILADLASH*****************SQVAIFVVLAMVLRRKPDVLISLLPIKRENPKYQGQDKLPVTAWIIAQTAQGDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERILSLPKARTILINGAVKKGERLVPPSALEVLMRVTFPAPSLRIKATERFEAIYPILKEVALAGSPGSKAMKQVAQHILTIAIKAAGEGLINSSRPPFW
****SALIEQILREDELEYRGLSRSY***EEWQTVSYK***************************************************************************************PKVTVSEAAARIDAGDLGAFLVDITGSYEKQEDIQLMRFADYFGRAFASVSSSQFPWLKTFRESTVAKMVDIPLSHVPEDVYKMSVDWLNQRSFDALGSFVLWSLDSILADLAS****************SKSQVAIFVVLAMVLRRKPDVLISLLPIKRENPKYQGQDKLPVTAWIIAQTAQGDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERILSLPKARTILINGAVKKGERLVPPSALEVLMRVTFPAPSLRIKATERFEAIYPILKEVALAGSPGSKAMKQVAQHILTIAIKAAGEGLINSSR****
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MDENSALIEQILREDELEYRGLSRSYNKDEEWQTVSYKKRHSKQPNSDNSLPDRRPDDGATTSDVFRAIEEHSEERRRRMSVPQVATPVTGEGSKRHSDEDDDSDAEVSAAVVEVKKVKQKKPKKPKVTVSEAAARIDAGDLGAFLVDITGSYEKQEDIQLMRFADYFGRAFASVSSSQFPWLKTFRESTVAKMVDIPLSHVPEDVYKMSVDWLNQRSFDALGSFVLWSLDSILADLASHQGTGKSSKKVVQQASSKSQVAIFVVLAMVLRRKPDVLISLLPIKRENPKYQGQDKLPVTAWIIAQTAQGDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERILSLPKARTILINGAVKKGERLVPPSALEVLMRVTFPAPSLRIKATERFEAIYPILKEVALAGSPGSKAMKQVAQHILTIAIKAAGEGLINSSRPPFW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query444 2.2.26 [Sep-21-2011]
A0JMW6 681 Transmembrane protein 214 N/A no 0.308 0.201 0.281 0.0003
>sp|A0JMW6|T214A_XENLA Transmembrane protein 214-A OS=Xenopus laevis GN=tmem214-a PE=2 SV=1 Back     alignment and function desciption
 Score = 47.0 bits (110), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 16/153 (10%)

Query: 264 VVLAMVLRRKPDVLISLLPIKRENPKYQGQDKLPVTA--WIIAQTAQGDLAVGLYMWVRV 321
           + L  VL  KP  + + LP   E  + Q    +   A  W + Q    DL+ GL +W+ +
Sbjct: 214 ICLQAVLLDKPKTVTNNLPKYLELLRSQVNRPMKCLAVMWAVGQAGFTDLSEGLKVWLGL 273

Query: 322 LLPMLSGKSSCNPQARDSILQLVERILSLPKARTILINGAVKKGERLVPPSALEVLMRVT 381
           + P+L G  +  P A   IL L          R +L +  + KG  ++ P     L+   
Sbjct: 274 MFPVL-GVKTLTPYA---ILYL---------DRLLLAHSNLTKGFGMIGPKDFFPLLDFA 320

Query: 382 F-PAPSLRIKATERFEAIYPILKEVALAGSPGS 413
           F P  SL     E    +YP LK +A   +P S
Sbjct: 321 FMPNNSLTSSQQENLRNLYPRLKVLAFGATPES 353





Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query444
359488293 587 PREDICTED: uncharacterized protein LOC10 0.975 0.737 0.668 1e-155
147777973 583 hypothetical protein VITISV_021204 [Viti 0.959 0.730 0.646 1e-148
356501035 592 PREDICTED: uncharacterized protein LOC10 0.970 0.728 0.646 1e-148
356553295 588 PREDICTED: uncharacterized protein LOC10 0.972 0.734 0.628 1e-147
225424297 594 PREDICTED: uncharacterized protein LOC10 0.968 0.723 0.605 1e-139
147814802 594 hypothetical protein VITISV_007906 [Viti 0.968 0.723 0.605 1e-139
224065188430 predicted protein [Populus trichocarpa] 0.675 0.697 0.772 1e-137
296087126446 unnamed protein product [Vitis vinifera] 0.684 0.681 0.769 1e-135
449449042 591 PREDICTED: uncharacterized protein LOC10 0.894 0.671 0.619 1e-134
255573742 589 conserved hypothetical protein [Ricinus 0.923 0.696 0.613 1e-133
>gi|359488293|ref|XP_003633736.1| PREDICTED: uncharacterized protein LOC100853921 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  553 bits (1425), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 302/452 (66%), Positives = 352/452 (77%), Gaps = 19/452 (4%)

Query: 1   MDENSALIEQILREDELEYRGLSRSYNKDEEWQTVSYKKRHSKQPNSDNSL-PDRRPDDG 59
           MDENS +IE ILR D+     L+   ++D  W+TVSY KR    P   NSL P   P   
Sbjct: 1   MDENSEIIEAILRGDD-HATNLNDHQSQDSGWKTVSYSKRRKNPPQ--NSLQPSLTP--- 54

Query: 60  ATTSDVFRAIEEHSEERRRRMSVPQVATPV------TGEGSKRHSDEDDDSDAEVSAAVV 113
              SDVFR++++HSE+R RR                +   SK+HSD DDDSDAE+ A  V
Sbjct: 55  FHNSDVFRSVDQHSEDRLRRAQEAAATAAAAAAALQSAVRSKQHSD-DDDSDAEIPAGAV 113

Query: 114 -----EVKKVKQKKPKKPKVTVSEAAARIDAGDLGAFLVDITGSYEKQEDIQLMRFADYF 168
                EVKKVK KKPKKPKV+V +AA+++DA DL AFL+DI+ SYE  +DIQLMRFADYF
Sbjct: 114 DNGGAEVKKVKPKKPKKPKVSVGDAASKMDADDLSAFLLDISASYETHQDIQLMRFADYF 173

Query: 169 GRAFASVSSSQFPWLKTFRESTVAKMVDIPLSHVPEDVYKMSVDWLNQRSFDALGSFVLW 228
           GRAFA VS++QFPW+K  +ESTVAKM+++PLSH+PE VYK S DW+NQRSF+A+GSFVLW
Sbjct: 174 GRAFAPVSAAQFPWMKILKESTVAKMIEVPLSHIPEAVYKTSGDWINQRSFEAVGSFVLW 233

Query: 229 SLDSILADLASHQGTGKSSKKVVQQASSKSQVAIFVVLAMVLRRKPDVLISLLPIKRENP 288
            LD+I ADLA HQGT K SKKV QQA SKSQVAIFVVLAM LRRKP+VLISLLPI +ENP
Sbjct: 234 LLDNIHADLAIHQGTVKGSKKVAQQAPSKSQVAIFVVLAMSLRRKPEVLISLLPIMKENP 293

Query: 289 KYQGQDKLPVTAWIIAQTAQGDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERIL 348
           KYQ QDKLPVT W+I+Q +QGDLAVGLYMW  +LLPMLSGKSSCNPQ+RD ILQLVERIL
Sbjct: 294 KYQAQDKLPVTVWMISQASQGDLAVGLYMWTHMLLPMLSGKSSCNPQSRDLILQLVERIL 353

Query: 349 SLPKARTILINGAVKKGERLVPPSALEVLMRVTFPAPSLRIKATERFEAIYPILKEVALA 408
           S PK+RTILINGAV+KGERLVPPSALE+LMR TFPAPS R+KATERFEA+YP LKEVALA
Sbjct: 354 SSPKSRTILINGAVRKGERLVPPSALELLMRATFPAPSARVKATERFEAMYPTLKEVALA 413

Query: 409 GSPGSKAMKQVAQHILTIAIKAAGEGLINSSR 440
           GS  SKAMKQV   I+  AIKAAGEG+++ SR
Sbjct: 414 GSSRSKAMKQVLLQIMNFAIKAAGEGILDLSR 445




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147777973|emb|CAN74204.1| hypothetical protein VITISV_021204 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356501035|ref|XP_003519334.1| PREDICTED: uncharacterized protein LOC100795617 isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|356553295|ref|XP_003544992.1| PREDICTED: uncharacterized protein LOC100805286 isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|225424297|ref|XP_002284658.1| PREDICTED: uncharacterized protein LOC100264607 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147814802|emb|CAN67931.1| hypothetical protein VITISV_007906 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224065188|ref|XP_002301707.1| predicted protein [Populus trichocarpa] gi|222843433|gb|EEE80980.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296087126|emb|CBI33500.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449449042|ref|XP_004142274.1| PREDICTED: uncharacterized protein LOC101205264 [Cucumis sativus] gi|449510363|ref|XP_004163644.1| PREDICTED: uncharacterized protein LOC101224709 [Cucumis sativus] Back     alignment and taxonomy information
>gi|255573742|ref|XP_002527792.1| conserved hypothetical protein [Ricinus communis] gi|223532827|gb|EEF34602.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query444
TAIR|locus:2013955 610 AT1G70770 "AT1G70770" [Arabido 0.686 0.5 0.627 3.9e-108
TAIR|locus:2081566 443 AT3G11880 "AT3G11880" [Arabido 0.664 0.665 0.476 4.8e-62
TAIR|locus:2013955 AT1G70770 "AT1G70770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1015 (362.4 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
 Identities = 192/306 (62%), Positives = 239/306 (78%)

Query:   129 TVSEAAARIDAGDLGAFLVDITGSYEKQEDIQLMRFADYFGRAFASVSSSQFPWLKTFRE 188
             ++ EAA++ID  +L AFLV+ + SY  Q +IQLMRFADYFGRA + VSS QFPW+K F+E
Sbjct:   138 SLPEAASKIDPLNLEAFLVEASESYASQPEIQLMRFADYFGRALSGVSSVQFPWVKMFKE 197

Query:   189 STVAKMVDIPLSHVPEDVYKMSVDWLNQRSFDALGSFVLWSLDSILADLASHQGTGXXXX 248
             S ++K++++PL+H+PE VYK SVDW+N R  +ALG+FVLW+ D IL DLA+ QG      
Sbjct:   198 SPLSKLIEVPLAHIPEPVYKTSVDWINHRPIEALGAFVLWAFDCILTDLAAQQGGAKGGK 257

Query:   249 XXXXXXXXXXXXXIFVVLAMVLRRKPDVLISLLPIKRENPKYQGQDKLPVTAWIIAQTAQ 308
                          IFV LAMVLRRKPD L ++LP  RENPKYQGQDKLPVT W++AQ +Q
Sbjct:   258 KGGQQTTSKSQVAIFVALAMVLRRKPDALTNVLPTLRENPKYQGQDKLPVTVWMMAQASQ 317

Query:   309 GDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERILSLPKARTILINGAVKKGERL 368
             GD+AVGLY W   LLP++ G  +CNPQ+RD ILQLVE+IL+ PKARTIL+NGAV+KGERL
Sbjct:   318 GDIAVGLYSWAHNLLPVV-GNKNCNPQSRDLILQLVEKILTNPKARTILVNGAVRKGERL 376

Query:   369 VPPSALEVLMRVTFPAPSLRIKATERFEAIYPILKEVALAGSPGSKAMKQVAQHILTIAI 428
             +PP + E+L+R+TFPA S R+KATERFEAIYP+LKEVALAG+PGSKAMKQV Q I T A+
Sbjct:   377 IPPPSFEILLRLTFPASSARVKATERFEAIYPLLKEVALAGAPGSKAMKQVTQQIFTFAL 436

Query:   429 KAAGEG 434
             K AGEG
Sbjct:   437 KLAGEG 442


GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006007 "glucose catabolic process" evidence=RCA
GO:0006098 "pentose-phosphate shunt" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA
TAIR|locus:2081566 AT3G11880 "AT3G11880" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query444
pfam10151 469 pfam10151, DUF2359, Uncharacterized conserved prot 3e-04
>gnl|CDD|150784 pfam10151, DUF2359, Uncharacterized conserved protein (DUF2359) Back     alignment and domain information
 Score = 42.6 bits (100), Expect = 3e-04
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 14/114 (12%)

Query: 301 WIIAQTAQGDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERILSLPKARTILING 360
           W + Q    +L  GL +W+ ++LP+L  K+     +  +I  L ER+L L    T     
Sbjct: 44  WALGQAGFTNLTQGLRVWLGIMLPVLGVKA----LSPYAIAYL-ERLLLLHDNLT----- 93

Query: 361 AVKKGERLVPPSALEVLMRVTF-PAPSLRIKATERFEAIYPILKEVALAGSPGS 413
              KG  ++ P     L+   F P  SL     E+   +YP LK +A    P S
Sbjct: 94  ---KGFGMLGPKDFFPLLDFAFMPNNSLSPSLQEQLCRLYPRLKVLAFGAKPES 144


This is a 450 amino acid region of a family of proteins conserved from insects to humans. The mouse protein, Q8BM55, is annotated as being a putative Vitamin K-dependent carboxylation gamma-carboxyglutamic (GLA) domain containing protein, but this could not be confirmed. The function is not known. Length = 469

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 444
KOG4467 557 consensus Uncharacterized conserved protein [Funct 100.0
PF10151 469 DUF2359: Uncharacterised conserved protein (DUF235 100.0
>KOG4467 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=1.5e-138  Score=1035.21  Aligned_cols=385  Identities=55%  Similarity=0.803  Sum_probs=368.1

Q ss_pred             CCchhHHHHHHhhhhhhhhccCCCCCCCCCCceEeeecccccCCCCCCCCCCC-------CCCCCCCCChhhHHHHHHhH
Q 013372            1 MDENSALIEQILREDELEYRGLSRSYNKDEEWQTVSYKKRHSKQPNSDNSLPD-------RRPDDGATTSDVFRAIEEHS   73 (444)
Q Consensus         1 md~~~~~~~~~~~~~~~~~t~~~~~~~~dhGWqkVt~~Kr~rkq~~~~~~~~~-------ngtl~~~~~~~vf~~~e~~a   73 (444)
                      ||++++.++++|++.+         +.+||||+||+||||+|||+++|++++.       |||++||+ .|||+|||+++
T Consensus         1 mdpiesveynGFet~n---------gn~dhgWkkvvyPkr~rkqk~adqa~a~gg~t~~~ngt~~ngg-~nvfrSLeeqA   70 (557)
T KOG4467|consen    1 MDPIESVEYNGFETLN---------GNDDHGWKKVVYPKRNRKQKPADQAAALGGVTLIPNGTLSNGG-GNVFRSLEEQA   70 (557)
T ss_pred             CChHHhhhhccccccC---------CCcccceeeeecccccccccchhhhhhcCCceeccCccccCCC-cchhhcccHHH
Confidence            9999999999999887         5599999999999999999999998764       88886655 89999999999


Q ss_pred             HHHHhcccCCcccC------CCCCCCC-CCC-CCCCCcchhh----hhhhHHhhhhccCCCCCCCcccHHHHHhcCCcch
Q 013372           74 EERRRRMSVPQVAT------PVTGEGS-KRH-SDEDDDSDAE----VSAAVVEVKKVKQKKPKKPKVTVSEAAARIDAGD  141 (444)
Q Consensus        74 e~r~~~~~~~~~~a------~~~~~~s-~~~-~dd~~d~d~~----~~~~~~e~kk~K~kk~kkpKvS~aeAAa~Id~~d  141 (444)
                      |+||+||.+++..+      +..|++| .++ +|+++|+||+    --.+.+|+||||+||.||||||+.|||.+|||.+
T Consensus        71 e~r~~riLaak~~~~~~d~~~~~rsk~rsnGyGd~GyDFd~sd~eia~lk~eevkkpkpkk~kkPkvsL~Eaa~kidpln  150 (557)
T KOG4467|consen   71 ETRLDRILAAKPNSDTADVSDGGRSKWRSNGYGDIGYDFDDSDSEIAVLKLEEVKKPKPKKSKKPKVSLQEAACKIDPLN  150 (557)
T ss_pred             HHHHHHHHhcCCCccccccccccchhhccccCCccccccCCccchhheeeHHHhcccCcccccCCcccHHHHHhccCHHH
Confidence            99999999999886      6677877 333 7888888776    3467999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhccccchhhHhHhhhHHhhhhccccccccchhhhccccccchhhccCCCCCchhhhhhhhhhhccCChhh
Q 013372          142 LGAFLVDITGSYEKQEDIQLMRFADYFGRAFASVSSSQFPWLKTFRESTVAKMVDIPLSHVPEDVYKMSVDWLNQRSFDA  221 (444)
Q Consensus       142 La~fL~~is~sY~~~p~iqLmRFaDYFgrafS~V~svqfpW~kmfkEs~l~k~idvPL~hIpe~Vykts~dWI~q~s~~a  221 (444)
                      |.+||++.+                                              +||+|||||||||++|||||+|+++
T Consensus       151 l~AFlveas----------------------------------------------~pL~Hipepvyktsadwin~rPiEa  184 (557)
T KOG4467|consen  151 LLAFLVEAS----------------------------------------------SPLSHIPEPVYKTSADWINQRPIEA  184 (557)
T ss_pred             HHHHhcCCC----------------------------------------------CccccCCcchhhccCCccccCCHHH
Confidence            999999876                                              7999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhcccCCCCCccccccccCccchHHHHHHHHHHHhcChhHHHhhhhccccCCCCCCCCCCchhHH
Q 013372          222 LGSFVLWSLDSILADLASHQGTGKSSKKVVQQASSKSQVAIFVVLAMVLRRKPDVLISLLPIKRENPKYQGQDKLPVTAW  301 (444)
Q Consensus       222 L~~FVlW~l~~IL~dl~~~~gg~kg~k~~~q~~s~ksqVaifV~LAmvLR~kP~vL~~vlptl~~~~~yqg~dkLPv~vW  301 (444)
                      |++||+|.++||+.|+..||||.||||||.||++|||||+|||+||||||++||.|+++||++|+|+||||||||||+||
T Consensus       185 lgafvlw~~dCil~Dla~qqgg~kggkKg~qQs~Sksqvaifvalamvlr~kPdaltn~LptlrenpKyqgQdkLpvtvw  264 (557)
T KOG4467|consen  185 LGAFVLWLTDCILVDLASQQGGRKGGKKGLQQSSSKSQVAIFVALAMVLRQKPDALTNSLPTLRENPKYQGQDKLPVTVW  264 (557)
T ss_pred             HHHHHHHHHHHHhccHHHHhhhhhhcccccccccchhHHHHHHHHHHHHHhccHHHHHhhHHHHhCccccCcccchHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccchhHHHHHHHHhhhhcccCCCCCCcchhhHHHHHHHHHhcCccchhhhhhhhhhcCCcccCchhHHHHHHHh
Q 013372          302 IIAQTAQGDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERILSLPKARTILINGAVKKGERLVPPSALEVLMRVT  381 (444)
Q Consensus       302 miaQAsqGDL~vGly~WahnLLP~v~gks~~nPqsrDliLQlvE~ILs~pkArtiLvngavrkgerLipP~sfe~LlR~t  381 (444)
                      |||||||||++||+|+|+|||||+|..|+ |||||||+||||||+||.+|||||||+|||||+|||||||++||||+|+|
T Consensus       265 mmaqasQgDi~vglyswahnLlpVvg~k~-cnPqsRdLiLqLVe~il~npkaRtilvngAvrkGeRLipppsFeil~rlt  343 (557)
T KOG4467|consen  265 MMAQASQGDIVVGLYSWAHNLLPVVGPKS-CNPQSRDLILQLVEAILLNPKARTILVNGAVRKGERLIPPPSFEILVRLT  343 (557)
T ss_pred             HhhccccCCeeeeehhhhcccccccCCCC-CCchHHHHHHHHHHHHHcCchHhHHhhhhhhhcCccccCCCcchhhhhcc
Confidence            99999999999999999999999999888 79999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccchhhhhHHHhhhhhhHhhhcCCCCcHHHHHHHHHHHHHHHHHhccCCccCCCCC
Q 013372          382 FPAPSLRIKATERFEAIYPILKEVALAGSPGSKAMKQVAQHILTIAIKAAGEGLINSSRPP  442 (444)
Q Consensus       382 FP~sSaRvKATeRFeAiYP~lKevALaG~~gskamkqv~qqi~~~slk~age~n~~la~e~  442 (444)
                      ||+||||||||||||||||+||||+|+|.||||+||||+||||+|++|.+||+||.|++|+
T Consensus       344 fPASsArvKaterfeaiYplLkEv~lagapGSkamkqVtqqiftfAlk~age~np~Lakea  404 (557)
T KOG4467|consen  344 FPASSARVKATERFEAIYPLLKEVSLAGAPGSKAMKQVTQQIFTFALKHAGETNPFLAKEA  404 (557)
T ss_pred             cccHHHHHHHHHHHHhhhHHHHhhhccCCCchHHHHHHHHHHHHHHHHHcCCCCchHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999986



>PF10151 DUF2359: Uncharacterised conserved protein (DUF2359); InterPro: IPR019308 This is a 450 amino acid region of a family of proteins conserved from insects to humans Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query444
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 50.2 bits (119), Expect = 1e-06
 Identities = 54/443 (12%), Positives = 125/443 (28%), Gaps = 131/443 (29%)

Query: 5   SALIEQILREDELEYRGLSRSYNKDEEWQTVSYKKRHSKQPNSDNSLPDRRPDDGATTSD 64
           + +   +    +++ +   + +     W  +               L  +   +  + SD
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIF-----WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218

Query: 65  VFRAIEEHSEERRRRMSVPQVATPVTGEGSKRHSDE----DDDSDAEVSAAV-VEVKKVK 119
               I+      +  +             SK + +      +  +A+   A  +  K + 
Sbjct: 219 HSSNIKLRIHSIQAELRRLLK--------SKPYENCLLVLLNVQNAKAWNAFNLSCKIL- 269

Query: 120 QKKPKKPKVTVSEAAARIDAGDLGA----FLVDITGSYEKQEDIQLMRFADYFGRAFASV 175
                   +T +      D           L   + +    E   L     Y        
Sbjct: 270 --------LT-TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL--LLKYLD-----C 313

Query: 176 SSSQFPWLKTFRE---------STVAKMVDIPLS------HVPED----VYKMSVDWLN- 215
                P     RE         S +A+ +   L+      HV  D    + + S++ L  
Sbjct: 314 RPQDLP-----REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP 368

Query: 216 ---QRSFDALGSF------------VLWS------LDSILADLASHQGTGKSSKKVVQQA 254
              ++ FD L  F            ++W       +  ++  L            +V++ 
Sbjct: 369 AEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH--------KYSLVEKQ 420

Query: 255 SSKSQVAIFVVLAMVLRRKPDVLISL--LPIKRENP--KYQGQDKLPVTA-----WIIA- 304
             +S ++I   + + L+ K +   +L    +   N    +   D +P          I  
Sbjct: 421 PKESTISIP-SIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH 479

Query: 305 ------QTAQGDLAVGLYM---WVRVLLPMLSGKSSCNPQARDSILQL------------ 343
                    +  L   +++   ++   +   S   + +    +++ QL            
Sbjct: 480 HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDP 539

Query: 344 -VERILS-----LPKARTILING 360
             ER+++     LPK    LI  
Sbjct: 540 KYERLVNAILDFLPKIEENLICS 562


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00