Citrus Sinensis ID: 013414

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440---
MASIRRTMSPVPRAGTFLNGEACQVASPLSKSSSCTQNHPASSGGLLSYLHSSLDSQALIFGVSSPRSSRPLERARPKAQVWRRALFHFLICFVVGVFIGLTPFVSMNLSTNLMSKQQALTFEMVYAFGNSQTYDGMARNVTVDNDGIKNNATLESQAEIRELRDVLSDDYSDNQSLPQDSDLVSRKLIIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVEMTSQSEETADVLRRTGVMYRHLVCKKNLTDVKDTRVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEELRQIRRFGTWTVGKLSENKMDTILEGPICNGTRVIGWHVNEPRERFRRFHAEMSGFAFNSTILWDPKRWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLEECSRIMAWLLPLESSNAFYPQKWFLKNNLDVMAPLARSS
ccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEcccccccccccccEEEEcccccccccccccHHHHHHHHHHHcccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHcccccEEEEEccccccEEEEcEEEcccEEEEEEEccccccccccccccccEEEEEccccccccccccccccccccccccccccHHHHHHHHccccccEEEccccccEEEEEEcccccccccccccccccccEEEEEcccccc
cccEEEccccccccccccccccccccccccccccccccccccccccHHHHHcHHHHHHHHHHHHcccccccHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccHHHHHHHHccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHccEEcEEEEEEEccccccEEEEcEEEcccEEEEEEEcccccccccccccHHHHEEEHHHHccccccccccccccEccccccccccHHHHHHHHHccHHHcccccccccEEEEEEEcccccccccccccccccccEEEEEccccc
masirrtmspvpragtflngeacqvasplsksssctqnhpassgglLSYLHssldsqalifgvssprssrplerarpKAQVWRRALFHFLICFVVGVFIGLTPFVSMNLSTNLMSKQQALTFEMVYAFgnsqtydgmarnvtvdndgiknnatLESQAEIRELRDVlsddysdnqslpqdsdlvsrKLIIIvtptdaqpfQAYYLNRLAHTLRMVQPPLLWIVVEMTSQSEETADVLRRTGVMYRHLVCkknltdvkdtRVHQRNVALSHIENHHLDGIvyfadenniyLTDLFEELRQIRRFGTwtvgklsenkmdtilegpicngtrvigwhvnepreRFRRFHAEmsgfafnstilwdpkrwhrptlepirqvvtvkdgfqaSTFVEQIVEDESQMEGLLEECSRIMAWLlplessnafypqkwflknnldvmaplarss
masirrtmspvpragtflNGEACQVASPLSKSSSCTQNHPASSGGLLSYLHSSLDSQALIFGvssprssrpleRARPKAQVWRRALFHFLICFVVGVFIGLTPFVSMNLSTNLMSKQQALTFEMVYAFGNSQTYDGMARNVTVDNDGIKNNATLESQAEIRELRDVLSDdysdnqslpqdsdlvsrKLIIIVtptdaqpfQAYYLNRLAHTLRMVQPPLLWIVVEMTSQSEETADVLRRTGVMYRHLVCkknltdvkdtrVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEELRQIRRFGTWTVGKLSENKMDTilegpicngtrviGWHVNEPRERFRRFHAEMSGFafnstilwdpkrWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLEECSRIMAWLLPLESSNAFYPQKWFLKNNLDVMAPLARSS
MASIRRTMSPVPRAGTFLNGEACQVASPLSKSSSCTQNHPAssggllsylhssldsQALIFGVSSPRSSRPLERARPKAQVWRRALFHFLICFVVGVFIGLTPFVSMNLSTNLMSKQQALTFEMVYAFGNSQTYDGMARNVTVDNDGIKNNATLESQAEIRELRDVLSDDYSDNQSLPQDSDLVSRKLIIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVEMTSQSEETADVLRRTGVMYRHLVCKKNLTDVKDTRVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEELRQIRRFGTWTVGKLSENKMDTILEGPICNGTRVIGWHVNEPRERFRRFHAEMSGFAFNSTILWDPKRWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLEECSRIMAWLLPLESSNAFYPQKWFLKNNLDVMAPLARSS
*********************************************************ALIF*****************AQVWRRALFHFLICFVVGVFIGLTPFVSMNLSTNLMSKQQALTFEMVYAFGNSQTYDGMARNVTVDN*************************************LVSRKLIIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVEMTSQSEETADVLRRTGVMYRHLVCKKNLTDVKDTRVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEELRQIRRFGTWTVGKLSENKMDTILEGPICNGTRVIGWHVNEPRERFRRFHAEMSGFAFNSTILWDPKRWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLEECSRIMAWLLPLESSNAFYPQKWFLKNNLDVM*******
****************************************************SLDSQALIFGV*******************RRALFHFLICFVVGVFIGLTPFVSMNLS*****************************************************************************LIIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVEMTSQSEETADVLRRTGVMYRHLVCKKNLTDVK*TRVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEELRQIRRFGTWTVGKLSENKMDTILEGPICNGTRVIGWHVNEPRERFRRFHAEMSGFAFNSTILWDPKRWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLEECSRIMAWLLPLESSNAFYPQKWFLKNNLDVMAPLA***
********SPVPRAGTFLNGEACQ******************SGGLLSYLHSSLDSQALIFGVS***************QVWRRALFHFLICFVVGVFIGLTPFVSMNLSTNLMSKQQALTFEMVYAFGNSQTYDGMARNVTVDNDGIKNNATLESQAEIRELRDVLSDDYSDNQSLPQDSDLVSRKLIIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVEMTSQSEETADVLRRTGVMYRHLVCKKNLTDVKDTRVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEELRQIRRFGTWTVGKLSENKMDTILEGPICNGTRVIGWHVNEPRERFRRFHAEMSGFAFNSTILWDPKRWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLEECSRIMAWLLPLESSNAFYPQKWFLKNNLDVMAPLARSS
*****RTMSPVPRAGTFLNGE***********************GLLSYLHSSLDSQALIFGVSSP************AQVWRRALFHFLICFVVGVFIGLTPFVSMNLSTNL*****ALTFEMV*****SQ***GMARNVTVDNDGIKNN***E*QA**RELRDVLSDDYSDNQSLPQDSDLVSRKLIIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVEMTSQSEETADVLRRTGVMYRHLVCKKNLTDVKDTRVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEELRQIRRFGTWTVGKLSENKMDTILEGPICNGTRVIGWHVNEPRERFRRFHAEMSGFAFNSTILWDPKRWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLEECSRIMAWLLPLESSNAFYPQKWFLKNNLDVMAPLAR**
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASIRRTMSPVPRAGTFLNGEACQVASPLSKSSSCTQNHPASSGGLLSYLHSSLDSQALIFGVSSPRSSRPLERARPKAQVWRRALFHFLICFVVGVFIGLTPFVSMNLSTNLMSKQQALTFEMVYAFGNSQTYDGMARNVTVDNDGIKNNATLESQAEIRELRDVLSDDYSDNQSLPQDSDLVSRKLIIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVEMTSQSEETADVLRRTGVMYRHLVCKKNLTDVKDTRVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEELRQIRRFGTWTVGKLSENKMDTILEGPICNGTRVIGWHVNEPRERFRRFHAEMSGFAFNSTILWDPKRWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLEECSRIMAWLLPLESSNAFYPQKWFLKNNLDVMAPLARSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query443 2.2.26 [Sep-21-2011]
Q9SXC4394 Probable beta-1,4-xylosyl yes no 0.871 0.979 0.456 1e-102
Q5QM25446 Probable glucuronosyltran yes no 0.860 0.854 0.453 9e-94
Q6AT32451 Probable glucuronosyltran no no 0.979 0.962 0.397 2e-87
Q8S626351 Probable glucuronosyltran no no 0.582 0.735 0.507 2e-74
Q7XTB2381 Probable glucuronosyltran no no 0.591 0.687 0.488 9e-72
Q9ZQC6351 Probable beta-1,4-xylosyl no no 0.738 0.931 0.398 4e-63
Q10N05415 Probable glucuronosyltran no no 0.650 0.693 0.357 1e-50
Q75L84371 Probable glucuronosyltran no no 0.729 0.870 0.329 5e-42
Q6Z3Y6338 Probable glucuronosyltran no no 0.485 0.636 0.365 3e-32
Q9FH90492 Probable beta-1,4-xylosyl no no 0.577 0.520 0.277 5e-27
>sp|Q9SXC4|IRX9H_ARATH Probable beta-1,4-xylosyltransferase IRX9H OS=Arabidopsis thaliana GN=IRX9H PE=1 SV=2 Back     alignment and function desciption
 Score =  373 bits (958), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 201/440 (45%), Positives = 270/440 (61%), Gaps = 54/440 (12%)

Query: 1   MASIRRTMSPVPRAGTFLNGEACQVASPLSKSSSCTQNHPASSGGLLSYLHSSLDSQALI 60
           MASIRRT+SP+    +  NG        +  SSS       +S   LSYL         +
Sbjct: 1   MASIRRTLSPMYHDRSHENG-GSHKGFTIGGSSS-----KHNSSQFLSYL-------TKL 47

Query: 61  FGVSS-PRSSRPLERARPKAQVWRRALFHFLICFVVGVFIGLTPFVSMNLSTNLMSKQQA 119
            GV+S P+SSR           WRR  + FL+ F++G  +GLTPF           K + 
Sbjct: 48  LGVTSDPKSSR--------RGPWRRPFYQFLVFFLLGFVLGLTPF----------GKMED 89

Query: 120 LTFEMVYAFGNSQTYDGMARNVTVDNDGIKNNATLESQAEIRELRDVLSDDYS---DNQS 176
           +     ++F   Q Y                   +E + E R+  +   D  S   + ++
Sbjct: 90  VNGSDRFSFEIKQPY-------------------VEERLENRKREEAAVDAVSFVAETEN 130

Query: 177 LPQDSDLVSRKLIIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVEMTSQSEETADV 236
             ++ + V +KL+I+VTPT  +  QAYYLNR+A TLR+V+ P+LWIVVE    S ET+++
Sbjct: 131 GKKEVNFVPKKLLIVVTPTYNRAMQAYYLNRVAQTLRLVESPVLWIVVEGNVASFETSEI 190

Query: 237 LRRTGVMYRHLVCKKNLTDVKDTRVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEE 296
           LR+TGVMYRHLVCK+N+T +KD  VHQRN AL HIE H LDGIVYFAD++NIY  +LF+ 
Sbjct: 191 LRKTGVMYRHLVCKRNMTSIKDRGVHQRNTALEHIELHKLDGIVYFADDDNIYSLELFQS 250

Query: 297 LRQIRRFGTWTVGKLSENKMDTILEGPICNGTRVIGWHVNEPRERFRRFHAEMSGFAFNS 356
           LRQI RFGTW V  L+++K   ILEGP+CNG++VIGWH NE  +R RRFH +MSGFAFNS
Sbjct: 251 LRQISRFGTWPVAMLAQSKNKAILEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNS 310

Query: 357 TILWDPKRWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLEECSRIMAWLLPL 416
           TILWDPKRW RP   P RQ+ TVK+GFQ ++F+EQ+V DES+MEG+   CS I+ W L L
Sbjct: 311 TILWDPKRWRRPFSHPTRQLDTVKEGFQETSFIEQVVADESEMEGVPPACSSILNWHLHL 370

Query: 417 ESSNAFYPQKWFLKNNLDVM 436
           ++ +  YPQ W ++ NL  +
Sbjct: 371 DALDVPYPQGWAIQKNLQAL 390
Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the elongation of glucuronoxylan xylosyl backbone.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: -
>sp|Q5QM25|GT12_ORYSJ Probable glucuronosyltransferase Os01g0675500 OS=Oryza sativa subsp. japonica GN=Os01g0675500 PE=2 SV=1 Back     alignment and function description
>sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1 Back     alignment and function description
>sp|Q8S626|GT102_ORYSJ Probable glucuronosyltransferase Os10g0205300 OS=Oryza sativa subsp. japonica GN=Os10g0205300 PE=2 SV=1 Back     alignment and function description
>sp|Q7XTB2|GT41_ORYSJ Probable glucuronosyltransferase Os04g0103100 OS=Oryza sativa subsp. japonica GN=Os04g0103100 PE=2 SV=2 Back     alignment and function description
>sp|Q9ZQC6|IRX9_ARATH Probable beta-1,4-xylosyltransferase IRX9 OS=Arabidopsis thaliana GN=IRX9 PE=2 SV=1 Back     alignment and function description
>sp|Q10N05|GT32_ORYSJ Probable glucuronosyltransferase Os03g0287800 OS=Oryza sativa subsp. japonica GN=Os03g0287800 PE=3 SV=1 Back     alignment and function description
>sp|Q75L84|GT51_ORYSJ Probable glucuronosyltransferase Os05g0123100 OS=Oryza sativa subsp. japonica GN=Os05g0123100 PE=2 SV=1 Back     alignment and function description
>sp|Q6Z3Y6|GT71_ORYSJ Probable glucuronosyltransferase Os07g0694400 OS=Oryza sativa subsp. japonica GN=Os07g0694400 PE=2 SV=1 Back     alignment and function description
>sp|Q9FH90|IX14H_ARATH Probable beta-1,4-xylosyltransferase IRX14H OS=Arabidopsis thaliana GN=IRX14H PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query443
255551018438 beta-1,3-glucuronyltransferase, putative 0.984 0.995 0.701 1e-180
224092304442 glycosyl transferase [Populus trichocarp 0.993 0.995 0.692 1e-175
359476360448 PREDICTED: probable beta-1,4-xylosyltran 0.988 0.977 0.668 1e-159
449436876435 PREDICTED: probable beta-1,4-xylosyltran 0.975 0.993 0.600 1e-149
356515593433 PREDICTED: probable beta-1,4-xylosyltran 0.968 0.990 0.6 1e-148
363807346433 uncharacterized protein LOC100808765 [Gl 0.968 0.990 0.590 1e-147
358344744438 Galactosylgalactosylxylosylprotein 3-bet 0.970 0.981 0.550 1e-129
147843879265 hypothetical protein VITISV_024403 [Viti 0.589 0.984 0.754 1e-116
66347019367 beta1,3-glucuronosyltransferase [Picea g 0.805 0.972 0.535 1e-109
357466791441 Galactosylgalactosylxylosylprotein 3-bet 0.934 0.938 0.459 1e-106
>gi|255551018|ref|XP_002516557.1| beta-1,3-glucuronyltransferase, putative [Ricinus communis] gi|223544377|gb|EEF45898.1| beta-1,3-glucuronyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 310/442 (70%), Positives = 367/442 (83%), Gaps = 6/442 (1%)

Query: 1   MASIRRTMSPVPRAGTFLNGEACQVASPLSKSSSCTQNHPASSGGLLSYLHSSLDSQALI 60
           MASIRRT+SPVPRAG  +NGE CQV SPLSKSSS  QN  ++S G LS L    DSQA I
Sbjct: 1   MASIRRTLSPVPRAGALMNGEVCQVPSPLSKSSSSAQNF-STSRGFLSSLLGLTDSQAFI 59

Query: 61  FGVSSPRSSRPLERARPKAQVWRRALFHFLICFVVGVFIGLTPFVSMNLSTNLMSKQQAL 120
            G+ SPRSSRP ER++ K QVWRRALFHFL+CFVVG+F+GLTPFVSMNLSTNLMSK QA 
Sbjct: 60  LGIFSPRSSRPPERSKLKGQVWRRALFHFLLCFVVGIFVGLTPFVSMNLSTNLMSKSQAF 119

Query: 121 TFEMVYAFGNSQTYDGMARNVT--VDNDGIKNNATLESQAEIRELRDVLSDDYSDNQSLP 178
           +FEMV    N  T++GM  N T   +++G+KNNATLE++ +   L D +S D   +QS+P
Sbjct: 120 SFEMVSTVKNFGTFEGMTTNATPIAESEGLKNNATLETEVK---LTDQISIDAPIHQSIP 176

Query: 179 QDSDLVSRKLIIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVEMTSQSEETADVLR 238
           +D +L SRKL+I+VTPT A+PFQAYYLNRLA+TL++VQPPLLWIVVEMTSQSE+TAD+LR
Sbjct: 177 EDLELASRKLLIVVTPTYARPFQAYYLNRLAYTLKLVQPPLLWIVVEMTSQSEQTADILR 236

Query: 239 RTGVMYRHLVCKKNLTDVKDTRVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEELR 298
           RTGVMYRHL+CKKN+TD+KD  +HQRNVALSHIE HHLDGIVYFAD++NIYL DLFE++R
Sbjct: 237 RTGVMYRHLICKKNVTDIKDGSIHQRNVALSHIETHHLDGIVYFADDDNIYLADLFEKMR 296

Query: 299 QIRRFGTWTVGKLSENKMDTILEGPICNGTRVIGWHVNEPRERFRRFHAEMSGFAFNSTI 358
           ++RRFGTWTV K++ +K    LEGPICNG+RVIGWHVNEP  RFRRFHA+MSGFAFNSTI
Sbjct: 297 EMRRFGTWTVAKVTGDKSKGFLEGPICNGSRVIGWHVNEPSRRFRRFHADMSGFAFNSTI 356

Query: 359 LWDPKRWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLEECSRIMAWLLPLES 418
           LWD KRW RPTLEPIR + T +DGFQ STF+EQ+VEDESQMEGLLE+CSRIM W L LE 
Sbjct: 357 LWDQKRWRRPTLEPIRLLDTFRDGFQVSTFIEQVVEDESQMEGLLEDCSRIMVWRLNLEP 416

Query: 419 SNAFYPQKWFLKNNLDVMAPLA 440
            N+FYP KWF  +NLDV++ LA
Sbjct: 417 PNSFYPPKWFTISNLDVISQLA 438

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224092304|ref|XP_002309550.1| glycosyl transferase [Populus trichocarpa] gi|222855526|gb|EEE93073.1| glycosyl transferase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359476360|ref|XP_002281445.2| PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like [Vitis vinifera] gi|296081866|emb|CBI20871.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449436876|ref|XP_004136218.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356515593|ref|XP_003526483.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like [Glycine max] Back     alignment and taxonomy information
>gi|363807346|ref|NP_001242118.1| uncharacterized protein LOC100808765 [Glycine max] gi|255637123|gb|ACU18893.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|358344744|ref|XP_003636447.1| Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase [Medicago truncatula] gi|355502382|gb|AES83585.1| Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|147843879|emb|CAN81600.1| hypothetical protein VITISV_024403 [Vitis vinifera] Back     alignment and taxonomy information
>gi|66347019|emb|CAI94898.1| beta1,3-glucuronosyltransferase [Picea glauca] Back     alignment and taxonomy information
>gi|357466791|ref|XP_003603680.1| Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase P [Medicago truncatula] gi|64967536|emb|CAI93174.2| beta-1,3-glucuronosyltransferase [Medicago truncatula] gi|355492728|gb|AES73931.1| Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase P [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query443
TAIR|locus:2196899394 IRX9-L "AT1G27600" [Arabidopsi 0.638 0.718 0.555 7.9e-93
TAIR|locus:2061748351 IRX9 "IRREGULAR XYLEM 9" [Arab 0.738 0.931 0.401 1.9e-60
ZFIN|ZDB-GENE-040801-191316 b3gat2 "beta-1,3-glucuronyltra 0.580 0.813 0.312 3e-24
TAIR|locus:2155533492 IRX14-L "IRREGULAR XYLEM 14-LI 0.293 0.264 0.343 4.8e-23
UNIPROTKB|F1S6C4347 B3GAT1 "Uncharacterized protei 0.525 0.671 0.327 7.4e-23
UNIPROTKB|Q5CB03335 B3GAT1 "Galactosylgalactosylxy 0.525 0.695 0.323 1.6e-22
UNIPROTKB|F5H0S0347 B3GAT1 "Galactosylgalactosylxy 0.525 0.671 0.323 1.6e-22
UNIPROTKB|Q9P2W7334 B3GAT1 "Galactosylgalactosylxy 0.525 0.697 0.323 1.6e-22
RGD|70880334 B3gat1 "beta-1,3-glucuronyltra 0.525 0.697 0.323 2.1e-22
UNIPROTKB|E2R9E8336 B3GAT1 "Galactosylgalactosylxy 0.503 0.663 0.324 3.6e-22
TAIR|locus:2196899 IRX9-L "AT1G27600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 861 (308.1 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
 Identities = 159/286 (55%), Positives = 211/286 (73%)

Query:   154 LESQAEIRELRDVLSDDYS---DNQSLPQDSDLVSRKLIIIVTPTDAQPFQAYYLNRLAH 210
             +E + E R+  +   D  S   + ++  ++ + V +KL+I+VTPT  +  QAYYLNR+A 
Sbjct:   105 VEERLENRKREEAAVDAVSFVAETENGKKEVNFVPKKLLIVVTPTYNRAMQAYYLNRVAQ 164

Query:   211 TLRMVQPPLLWIVVEMTSQSEETADVLRRTGVMYRHLVCKKNLTDVKDTRVHQRNVALSH 270
             TLR+V+ P+LWIVVE    S ET+++LR+TGVMYRHLVCK+N+T +KD  VHQRN AL H
Sbjct:   165 TLRLVESPVLWIVVEGNVASFETSEILRKTGVMYRHLVCKRNMTSIKDRGVHQRNTALEH 224

Query:   271 IENHHLDGIVYFADENNIYLTDLFEELRQIRRFGTWTVGKLSENKMDTILEGPICNGTRV 330
             IE H LDGIVYFAD++NIY  +LF+ LRQI RFGTW V  L+++K   ILEGP+CNG++V
Sbjct:   225 IELHKLDGIVYFADDDNIYSLELFQSLRQISRFGTWPVAMLAQSKNKAILEGPVCNGSQV 284

Query:   331 IGWHVNEPRERFRRFHAEMSGFAFNSTILWDPKRWHRPTLEPIRQVVTVKDGFQASTFVE 390
             IGWH NE  +R RRFH +MSGFAFNSTILWDPKRW RP   P RQ+ TVK+GFQ ++F+E
Sbjct:   285 IGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPFSHPTRQLDTVKEGFQETSFIE 344

Query:   391 QIVEDESQMEGLLEECSRIMAWLLPLESSNAFYPQKWFLKNNLDVM 436
             Q+V DES+MEG+   CS I+ W L L++ +  YPQ W ++ NL  +
Sbjct:   345 QVVADESEMEGVPPACSSILNWHLHLDALDVPYPQGWAIQKNLQAL 390
GO:0006486 "protein glycosylation" evidence=ISS
GO:0015018 "galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0009834 "secondary cell wall biogenesis" evidence=IMP
GO:0010417 "glucuronoxylan biosynthetic process" evidence=IMP
GO:0042285 "xylosyltransferase activity" evidence=IMP
GO:0010584 "pollen exine formation" evidence=IMP
TAIR|locus:2061748 IRX9 "IRREGULAR XYLEM 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040801-191 b3gat2 "beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
TAIR|locus:2155533 IRX14-L "IRREGULAR XYLEM 14-LIKE" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1S6C4 B3GAT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q5CB03 B3GAT1 "Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F5H0S0 B3GAT1 "Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9P2W7 B3GAT1 "Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|70880 B3gat1 "beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2R9E8 B3GAT1 "Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SXC4IRX9H_ARATH2, ., 4, ., 2, ., -0.45680.87130.9796yesno
Q5QM25GT12_ORYSJ2, ., 4, ., -, ., -0.45340.86000.8542yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
3rd Layer2.4.1.135LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query443
PLN02458346 PLN02458, PLN02458, transferase, transferring glyc 4e-96
cd00218223 cd00218, GlcAT-I, Beta1,3-glucuronyltransferase I 5e-96
pfam03360206 pfam03360, Glyco_transf_43, Glycosyltransferase fa 1e-65
>gnl|CDD|215252 PLN02458, PLN02458, transferase, transferring glycosyl groups Back     alignment and domain information 
 Score =  292 bits (748), Expect = 4e-96
 Identities = 145/359 (40%), Positives = 212/359 (59%), Gaps = 32/359 (8%)

Query: 72  LERARPKAQVWRRALFHFLICFVVGVFIGLTP-----FVSMNLSTNLMSKQQALTFEMVY 126
           LER++ K Q+W++A+ HF +CFV+G F G  P     F S + + +  S+      EM++
Sbjct: 4   LERSKKKVQLWKKAVVHFSLCFVMGFFTGFAPAGKASFFSSHEAASNKSQFSPQPVEMLH 63

Query: 127 AFGNSQTYDGMARNVTVDNDGIKNNATLESQAEIR-ELRDVLSDDYSDNQSLPQDSDLVS 185
                          T  +    N   + +Q  +    R   S+  S  +   ++  L  
Sbjct: 64  V-------------ATTPHHSNLNRTLINAQTPVPAPARSAESETASLLEKEEEEPKLAP 110

Query: 186 RKLIIIVTPTDAQ-PFQAYYLNRLAHTLRMVQPPLLWIVVEMTSQSEETADVLRRTGVMY 244
           R+L+IIVTP   +  +Q   L RLA+TLR+V PPLLWIVVE  S SEE +++LR+TG+MY
Sbjct: 111 RRLVIIVTPISTKDRYQGVLLRRLANTLRLVPPPLLWIVVEGQSDSEEVSEMLRKTGIMY 170

Query: 245 RHLVCKKNLTDVKDTRVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEELRQIRRFG 304
           RHLV K+N TD +    HQRN+AL HIE+H L GIV+FA  +N+Y  D F+E+R I  FG
Sbjct: 171 RHLVFKENFTDPEAELDHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEIRDIEVFG 230

Query: 305 TWTVGKLSENKMDTILEGPICNGTRVIGWHVNE-PRERFRRFHAEMSGFAFNSTILWDPK 363
           TW +  LS N+   I+EGP+C+ ++VIGWH+ +   E   R    +S FAFNS+ILWDP+
Sbjct: 231 TWPMALLSANRNKVIIEGPVCDSSQVIGWHLKKMNNETETRPPIHISSFAFNSSILWDPE 290

Query: 364 RWHRPTLEPIRQVVTVKDGFQAS-TFVEQIV-EDESQMEGL-LEECSRIMAWLLPLESS 419
           RW RP+        +V+   Q S  FV+Q+  EDE++++G+  E+CS+IM W L   + 
Sbjct: 291 RWGRPS--------SVQGTSQNSIKFVKQVALEDETKLKGIPPEDCSKIMLWRLNFPTR 341

Length = 346
>gnl|CDD|132995 cd00218, GlcAT-I, Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis Back     alignment and domain information
>gnl|CDD|217513 pfam03360, Glyco_transf_43, Glycosyltransferase family 43 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 443
PLN02458346 transferase, transferring glycosyl groups 100.0
cd00218223 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) 100.0
KOG1476330 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQ 100.0
PF03360207 Glyco_transf_43: Glycosyltransferase family 43; In 100.0
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 97.88
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 96.61
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 96.56
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 96.46
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 96.29
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 96.11
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 95.96
cd06423180 CESA_like CESA_like is the cellulose synthase supe 95.94
PRK10018279 putative glycosyl transferase; Provisional 95.9
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 95.83
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 95.82
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 95.79
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 95.7
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 95.62
PRK10063248 putative glycosyl transferase; Provisional 95.55
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 95.51
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 95.41
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 95.4
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 95.11
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 95.1
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 95.05
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 94.71
cd06442224 DPM1_like DPM1_like represents putative enzymes si 94.66
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 94.46
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 94.42
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 94.14
PRK10073328 putative glycosyl transferase; Provisional 94.13
cd06438183 EpsO_like EpsO protein participates in the methano 93.59
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 93.52
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 93.17
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 93.15
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 93.01
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 92.91
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 92.3
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 92.21
cd04188211 DPG_synthase DPG_synthase is involved in protein N 92.18
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 91.98
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 91.82
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 91.44
PRK11204 420 N-glycosyltransferase; Provisional 90.63
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 90.06
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 89.01
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 87.2
PRK14583 444 hmsR N-glycosyltransferase; Provisional 85.91
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 84.3
>PLN02458 transferase, transferring glycosyl groups Back     alignment and domain information 
Probab=100.00  E-value=4.4e-112  Score=842.35  Aligned_cols=331  Identities=41%  Similarity=0.732  Sum_probs=274.8

Q ss_pred             CccccCCccchhhHHhhhhHHHHHHHHHhhhcccCcccccchhhhhcccccchhhhccCCCCccc--cCc-cceeEeecC
Q 013414           70 RPLERARPKAQVWRRALFHFLICFVVGVFIGLTPFVSMNLSTNLMSKQQALTFEMVYAFGNSQTY--DGM-ARNVTVDND  146 (443)
Q Consensus        70 ~~~er~k~~~~~w~r~~~h~~lcF~~G~f~G~~p~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~--~~~-~~~~~~~~~  146 (443)
                      +|.||+||+.||||||++||+||||||||+||+|.++++++|+..+.....+|.+.+.    +|.  .+. ..+.+..  
T Consensus         2 ~~~~r~k~~~~lwkka~~h~slcfvmgfftgfap~~~~~~~s~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--   75 (346)
T PLN02458          2 GSLERSKKKVQLWKKAVVHFSLCFVMGFFTGFAPAGKASFFSSHEAASNKSQFSPQPV----EMLHVATTPHHSNLNR--   75 (346)
T ss_pred             CcccccchhHHHHHHHHHHHHHHHHhhhhhccCcCccchhhcccccccccccCCCCCc----ccccccCcccccccee--
Confidence            4789999999999999999999999999999999999999987653333334433321    110  001 1112111  


Q ss_pred             CccccccchhhHHhhhhhcccccc-ccc-CCCCCCCCCCCCcceEEEEccCCC-cchhhhhHHHHHhhhccCCCCceEEE
Q 013414          147 GIKNNATLESQAEIRELRDVLSDD-YSD-NQSLPQDSDLVSRKLIIIVTPTDA-QPFQAYYLNRLAHTLRMVQPPLLWIV  223 (443)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~lIivVTPTy~-R~~Q~a~LTRLahTL~lVpp~L~WIV  223 (443)
                        ... ..+.   +.|+++-..|. ... .....++.++.++|+||||||||. |++|+||||||||||+||||||||||
T Consensus        76 --~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlIivVTPTY~rR~~Q~a~LTRLahTL~lVp~pL~WIV  149 (346)
T PLN02458         76 --TLI-NAQT---PVPAPARSAESETASLLEKEEEEPKLAPRRLVIIVTPISTKDRYQGVLLRRLANTLRLVPPPLLWIV  149 (346)
T ss_pred             --ccc-cccC---CCccChhhhhhhhhhhhhccccccCCCCCceEEEECCCCCCcchhHHHHHHHHHHHhcCCCCceEEE
Confidence              000 0000   01122222111 100 001124678899999999999998 79999999999999999998999999


Q ss_pred             EecCCCCHHHHHHHHhcCCceeEeeecCCCCCCCchhhhHHHHHHHHHHhhCCCeEEEEecCCCcccHHHHHHhhcccee
Q 013414          224 VEMTSQSEETADVLRRTGVMYRHLVCKKNLTDVKDTRVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEELRQIRRF  303 (443)
Q Consensus       224 VEd~~~s~~ta~lLrrsGl~y~HL~~~~~~~~~~~rgv~QRN~AL~~Ir~h~l~GVVYFADDDNtYdl~LFdemR~ir~v  303 (443)
                      |||+..+++|++||++|||||+||+|+++++..+.++++|||+||+|||+|+++||||||||||+||++||||||+||+|
T Consensus       150 VEd~~~t~~va~lLrrsGl~y~HL~~k~~~~~~~~r~~~QRN~AL~~IR~h~l~GVVyFADDdNtYsl~LFeEmR~ik~v  229 (346)
T PLN02458        150 VEGQSDSEEVSEMLRKTGIMYRHLVFKENFTDPEAELDHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEIRDIEVF  229 (346)
T ss_pred             EeCCCCCHHHHHHHHHcCCceEEeccCCCCCCccchhHHHHHHHHHHHHhcCcCceEEEccCCCcccHHHHHHHhcCcee
Confidence            99999999999999999999999999999888888999999999999999999999999999999999999999999999


Q ss_pred             eeeEeeeecCCCccceeeceeecCCeEEEEEeCCC-CCCCCCCccccceeeeeeccccCCCCCCCCCCcccccccccCCC
Q 013414          304 GTWTVGKLSENKMDTILEGPICNGTRVIGWHVNEP-RERFRRFHAEMSGFAFNSTILWDPKRWHRPTLEPIRQVVTVKDG  382 (443)
Q Consensus       304 GvWPVGlvg~~~~k~~vEGPvc~~~kVvGW~t~~~-~~~~R~fpIDMAGFAfNs~lLwdp~~w~rP~~~~~~~~~~~k~G  382 (443)
                      |+||||++|++++++.||||+|++|||+|||+.|. ..+.|+|||||||||||++|||||++|+||++        +++|
T Consensus       230 G~WPVGlvg~~~~~~~vEGPvc~~gkVvGWht~w~~~~~~RrfpIDMAGFAfNs~lLwdP~rw~Rp~~--------~~~~  301 (346)
T PLN02458        230 GTWPMALLSANRNKVIIEGPVCDSSQVIGWHLKKMNNETETRPPIHISSFAFNSSILWDPERWGRPSS--------VQGT  301 (346)
T ss_pred             eecceEEeecccccceeECceecCCeEeEEeccccccCCCCCCCcceeeeeeehhhhcChhhhCCCCC--------CCcc
Confidence            99999999999999999999999999999999984 23679999999999999999999999999874        6889


Q ss_pred             cchh-hHHHHh-ccCccceeecC-CCCCEEEEeeCCCCCCC
Q 013414          383 FQAS-TFVEQI-VEDESQMEGLL-EECSRIMAWLLPLESSN  420 (443)
Q Consensus       383 ~qEs-~FL~qL-v~d~~~lEpla-~~CskVLVWHtrte~p~  420 (443)
                      +||| .||+|| ++|+.++||++ +||++|||||++++...
T Consensus       302 ~qeS~~Fv~ql~~~de~q~egipa~~CskVmvWhl~~~~~~  342 (346)
T PLN02458        302 SQNSIKFVKQVALEDETKLKGIPPEDCSKIMLWRLNFPTRT  342 (346)
T ss_pred             chHHHHHHHHHhhccccccccCCcCCCCEEEEEEeccCCcc
Confidence            9999 999999 58999999996 79999999999998753

>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis Back     alignment and domain information
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query443
1v82_A253 Crystal Structure Of Human Glcat-P Apo Form Length 6e-21
2d0j_A246 Crystal Structure Of Human Glcat-S Apo Form Length 5e-19
3cu0_A281 Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In 2e-17
1fgg_A261 Crystal Structure Of 1,3-Glucuronyltransferase I (G 3e-17
>pdb|1V82|A Chain A, Crystal Structure Of Human Glcat-P Apo Form Length = 253 Back     alignment and structure 
Iteration: 1

 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 122/241 (50%), Gaps = 33/241 (13%)
Query: 189 IIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVE-MTSQSEETADVLRRTGVMYRHL 247
           I +VTPT ++P Q   L R+A+TL  V P L W+VVE    ++  TA +LR TG+ Y HL
Sbjct: 5   IHVVTPTYSRPVQKAELTRMANTLLHV-PNLHWLVVEDAPRRTPLTARLLRDTGLNYTHL 63
Query: 248 VCK-----KNLTDVKDTRV----HQRNVALSHIE-----NHHLDGIVYFADENNIYLTDL 293
             +     K   D +D R+     QRN+AL  +      N    G+VYFAD++N Y  +L
Sbjct: 64  HVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLEL 123
Query: 294 FEELRQIRRFGTWTVGKLSENKMDTILEGPICNGT-RVIGWH-VNEPRERFRRFHAEMSG 351
           FEE+R  RR   W V  +   +     E P  NG  +V+ W  V +P    R F  +M+G
Sbjct: 124 FEEMRSTRRVSVWPVAFVGGLRY----EAPRVNGAGKVVRWKTVFDPH---RPFAIDMAG 176
Query: 352 FAFNSTILWDPKRWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLEECSRIMA 411
           FA N  ++           +   ++  VK G+Q S+ + ++V   + +E     C++I+ 
Sbjct: 177 FAVNLRLILQRS-------QAYFKLRGVKGGYQESSLLRELV-TLNDLEPKAANCTKILV 228
Query: 412 W 412
           W
Sbjct: 229 W 229
>pdb|2D0J|A Chain A, Crystal Structure Of Human Glcat-S Apo Form Length = 246 Back     alignment and structure
>pdb|3CU0|A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser Length = 281 Back     alignment and structure
>pdb|1FGG|A Chain A, Crystal Structure Of 1,3-Glucuronyltransferase I (Glcat-I) Complexed With Gal-Gal-Xyl, Udp, And Mn2+ Length = 261 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query443
3cu0_A281 Galactosylgalactosylxylosylprotein 3-beta- glucuro 3e-85
1v84_A253 Galactosylgalactosylxylosylprotein 3-beta- glucuro 1e-81
2d0j_A246 Galactosylgalactosylxylosylprotein 3-beta- glucuro 8e-80
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A* Length = 281 Back     alignment and structure
 Score =  261 bits (668), Expect = 3e-85
 Identities = 70/287 (24%), Positives = 110/287 (38%), Gaps = 37/287 (12%)

Query: 167 LSDDYSDNQSLPQDSDLVSRKLIIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVEM 226
           +   +  +          S   I +VTPT A+  Q   L RL+ TL +V      +V + 
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMTIYVVTPTYARLVQKAELVRLSQTLSLVPRLHWLLVEDA 60

Query: 227 TSQSEETADVLRRTGVMYRHLVCKKNLTD---------VKDTRVHQRNVALSHIENHH-- 275
              +   + +L  +G+++ HLV                V    V QRN AL  +      
Sbjct: 61  EGPTPLVSGLLAASGLLFTHLVVLTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGA 120

Query: 276 -----------LDGIVYFADENNIYLTDLFEELRQIRRFGTWTVGKLSENKMDTILEGPI 324
                        G+VYFAD++N Y  +LFEE+R  R    W VG +   +     EGP 
Sbjct: 121 VGGEKDPPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGGLR----FEGPQ 176

Query: 325 CNGTRVIGWHVNEPRERFRRFHAEMSGFAFNSTILWDPKRWHRPTLEPIRQVVTVKDGFQ 384
               RV+G+H     E  R F  +M+GFA    +L D       +        T   G  
Sbjct: 177 VQDGRVVGFHTAW--EPSRPFPVDMAGFAVALPLLLDKPNAQFDS--------TAPRGHL 226

Query: 385 ASTFVEQIVEDESQMEGLLEECSRIMAWLLPLESSNAFYPQKWFLKN 431
            S+ +  +V D   +E     C+R++ W    E       ++   + 
Sbjct: 227 ESSLLSHLV-DPKDLEPRAANCTRVLVWHTRTEKPKMKQEEQLQRQG 272
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A* Length = 253 Back     alignment and structure
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query443
1v84_A253 Galactosylgalactosylxylosylprotein 3-beta- glucuro 100.0
2d0j_A246 Galactosylgalactosylxylosylprotein 3-beta- glucuro 100.0
3cu0_A281 Galactosylgalactosylxylosylprotein 3-beta- glucuro 100.0
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 96.56
3bcv_A240 Putative glycosyltransferase protein; protein stru 95.97
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 95.43
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 94.59
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 94.21
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 93.95
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 93.35
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 93.08
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 92.02
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 90.05
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 89.95
1fo8_A343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 88.04
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 86.54
2wvl_A391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 82.05
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A* Back     alignment and structure
Probab=100.00  E-value=3.6e-93  Score=689.15  Aligned_cols=234  Identities=32%  Similarity=0.524  Sum_probs=211.5

Q ss_pred             cceEEEEccCCCcchhhhhHHHHHhhhccCCCCceEEEEecCC-CCHHHHHHHHhcCCceeEeeecCCC---------CC
Q 013414          186 RKLIIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVEMTS-QSEETADVLRRTGVMYRHLVCKKNL---------TD  255 (443)
Q Consensus       186 ~~lIivVTPTy~R~~Q~a~LTRLahTL~lVpp~L~WIVVEd~~-~s~~ta~lLrrsGl~y~HL~~~~~~---------~~  255 (443)
                      .|+||||||||+|++|+||||||||||+||| |||||||||++ .+++|+++|++|||+|+||+|+++.         .+
T Consensus         2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~Vp-~L~WIVVEd~~~~t~~va~lL~~sgl~y~HL~~~~p~~~~~~~~~~~~   80 (253)
T 1v84_A            2 LPTIHVVTPTYSRPVQKAELTRMANTLLHVP-NLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDARDP   80 (253)
T ss_dssp             CCEEEEEEEECCSTTHHHHHHHHHHHHTTSS-SEEEEEEESSSSCCHHHHHHHHHHCCEEEEEECCCCHHHHCC------
T ss_pred             CCEEEEEeCCCCccchhHHHHHHhhhhccCC-ceEEEEEeCCCCCCHHHHHHHHHcCCceEEeecCCCccccccccccCc
Confidence            6899999999999999999999999999998 99999999976 6999999999999999999998531         12


Q ss_pred             CCchhhhHHHHHHHHHHhh-----CCCeEEEEecCCCcccHHHHHHhhccceeeeeEeeeecCCCccceeeceeec-CCe
Q 013414          256 VKDTRVHQRNVALSHIENH-----HLDGIVYFADENNIYLTDLFEELRQIRRFGTWTVGKLSENKMDTILEGPICN-GTR  329 (443)
Q Consensus       256 ~~~rgv~QRN~AL~~Ir~h-----~l~GVVYFADDDNtYdl~LFdemR~ir~vGvWPVGlvg~~~~k~~vEGPvc~-~~k  329 (443)
                      .++||++|||+||+|||+|     +++||||||||||+||++||||||+||+|||||||++|+.    .+|||+|+ +||
T Consensus        81 ~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR~i~~vgvWPVglvg~~----~~EgPv~~~~gk  156 (253)
T 1v84_A           81 RIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGGL----RYEAPRVNGAGK  156 (253)
T ss_dssp             -CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHHTCSSEEECCEESCTTS----SEEEEEECTTSC
T ss_pred             cccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHhccCeeEEEEEEeecCc----ceecCeECCCCC
Confidence            3679999999999999984     7899999999999999999999999999999999999984    68999999 899


Q ss_pred             EEEEEeCCCCCCCCCCccccceeeeeeccc-cCCCCCCCCCCcccccccccCCCcchhhHHHHhccCccceeecCCCCCE
Q 013414          330 VIGWHVNEPRERFRRFHAEMSGFAFNSTIL-WDPKRWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLEECSR  408 (443)
Q Consensus       330 VvGW~t~~~~~~~R~fpIDMAGFAfNs~lL-wdp~~w~rP~~~~~~~~~~~k~G~qEs~FL~qLv~d~~~lEpla~~Csk  408 (443)
                      |+|||+.|.  +.|+|||||||||||+++| |+|++|.+        .+.+++|||||+||++|+. .++|||+|+||+|
T Consensus       157 VvGw~~~w~--~~R~fpiDmAGFA~N~~lll~~p~a~~~--------~~~~~~g~~Es~fL~~l~~-~~~lEp~~~~C~~  225 (253)
T 1v84_A          157 VVRWKTVFD--PHRPFAIDMAGFAVNLRLILQRSQAYFK--------LRGVKGGYQESSLLRELVT-LNDLEPKAANCTK  225 (253)
T ss_dssp             EEEEECSSC--TTSTTCCCGGGEEEEHHHHHHSTTCCCC--------SSSSCTTCHHHHHHHHHCC-GGGEEECHHHHTS
T ss_pred             EeeeecccC--CCCCccceeeeeEEEehhhhhCCCceec--------cccCCCcchhhHHHHhhhh-HhhcEecCCCCCE
Confidence            999999987  5799999999999999965 57887643        3457899999999999984 6899999999999


Q ss_pred             EEEeeCCCCCCCCC-CCcccccCCCCcc
Q 013414          409 IMAWLLPLESSNAF-YPQKWFLKNNLDV  435 (443)
Q Consensus       409 VLVWHtrte~p~l~-yp~~w~~~~~ld~  435 (443)
                      ||||||+||+|++. .|++|..++++|+
T Consensus       226 VlvWHtrte~p~~~~e~~~~~~~~~~e~  253 (253)
T 1v84_A          226 ILVWHTRTEKPVLVNEGKKGFTDPSVEI  253 (253)
T ss_dssp             CCEECCCBCCCCCGGGTTTCSSCTTSCC
T ss_pred             EEEEecccCCcccccccccccCCCCccC
Confidence            99999999999875 5666999998875
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens} Back     alignment and structure
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 443
d1v82a_252 c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, Gl 9e-90
d3cu0a1261 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (g 4e-89
>d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]} Length = 252 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: 1,3-glucuronyltransferase
domain: Beta-1,3-glucuronyltransferase 1, GlcAT-P
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  270 bits (693), Expect = 9e-90
 Identities = 81/265 (30%), Positives = 125/265 (47%), Gaps = 32/265 (12%)

Query: 188 LIIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVE-MTSQSEETADVLRRTGVMYRH 246
            I +VTPT ++P Q   L R+A+TL  V P L W+VVE    ++  TA +LR TG+ Y H
Sbjct: 3   TIHVVTPTYSRPVQKAELTRMANTLLHV-PNLHWLVVEDAPRRTPLTARLLRDTGLNYTH 61

Query: 247 LVCK-----KNLTDVKDTR----VHQRNVALSHI-----ENHHLDGIVYFADENNIYLTD 292
           L  +     K   D +D R      QRN+AL  +      N    G+VYFAD++N Y  +
Sbjct: 62  LHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLE 121

Query: 293 LFEELRQIRRFGTWTVGKLSENKMDTILEGPICNGT-RVIGWHVNEPRERFRRFHAEMSG 351
           LFEE+R  RR   W V  +   +     E P  NG  +V+ W         R F  +M+G
Sbjct: 122 LFEEMRSTRRVSVWPVAFVGGLRY----EAPRVNGAGKVVRWKTVFDPH--RPFAIDMAG 175

Query: 352 FAFNSTILWDPKRWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLEECSRIMA 411
           FA N  ++    + +            VK G+Q S+ + ++V   + +E     C++I+ 
Sbjct: 176 FAVNLRLILQRSQAYFKL-------RGVKGGYQESSLLRELV-TLNDLEPKAANCTKILV 227

Query: 412 WLLPLESSN-AFYPQKWFLKNNLDV 435
           W    E        +K F   ++++
Sbjct: 228 WHTRTEKPVLVNEGKKGFTDPSVEI 252
>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]} Length = 261 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query443
d3cu0a1261 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo 100.0
d1v82a_252 Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human ( 100.0
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 95.86
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 94.77
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 94.2
>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: 1,3-glucuronyltransferase
domain: 1,3-Glucuronyltransferase I (glcAT-I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-95  Score=700.51  Aligned_cols=234  Identities=31%  Similarity=0.489  Sum_probs=211.9

Q ss_pred             eEEEEccCCCcchhhhhHHHHHhhhccCCCCceEEEEecCC-CCHHHHHHHHhcCCceeEeeecCCCC---------CCC
Q 013414          188 LIIIVTPTDAQPFQAYYLNRLAHTLRMVQPPLLWIVVEMTS-QSEETADVLRRTGVMYRHLVCKKNLT---------DVK  257 (443)
Q Consensus       188 lIivVTPTy~R~~Q~a~LTRLahTL~lVpp~L~WIVVEd~~-~s~~ta~lLrrsGl~y~HL~~~~~~~---------~~~  257 (443)
                      +||||||||+|++|+||||||||||+||| +||||||||+. .|++|++||++|||+|+||+++++..         +.+
T Consensus         2 TIyvVTPTY~R~~Q~a~LtRLa~TL~lVp-~l~WIVVEDa~~~t~~v~~lL~~sgl~y~HL~~~tp~~~~~~~~~~~~~~   80 (261)
T d3cu0a1           2 TIYVVTPTYARLVQKAELVRLSQTLSLVP-RLHWLLVEDAEGPTPLVSGLLAASGLLFTHLVVLTPKAQRLREGEPGWVH   80 (261)
T ss_dssp             EEEEEEEECCSTTHHHHHHHHHHHHTTSS-SEEEEEEESSSSCCHHHHHHHHHHCSEEEEEECCCC-----------CCC
T ss_pred             eEEEECCCCCCchhHHHHHHHHHHHhcCC-CeeEEEEECCCCCCHHHHHHHHHcCCceEEeecCCchhhcccccCccccc
Confidence            79999999999999999999999999997 89999999876 58999999999999999999986542         246


Q ss_pred             chhhhHHHHHHHHHHhh-------------CCCeEEEEecCCCcccHHHHHHhhccceeeeeEeeeecCCCccceeecee
Q 013414          258 DTRVHQRNVALSHIENH-------------HLDGIVYFADENNIYLTDLFEELRQIRRFGTWTVGKLSENKMDTILEGPI  324 (443)
Q Consensus       258 ~rgv~QRN~AL~~Ir~h-------------~l~GVVYFADDDNtYdl~LFdemR~ir~vGvWPVGlvg~~~~k~~vEGPv  324 (443)
                      +||++|||+||+|||+|             +++||||||||||+||++||||||+||+|||||||++|+    +.+|||+
T Consensus        81 prgv~qRn~aL~~ir~~~~~~~~~~~~~~~~~~GVVyFADDdNtYsl~LF~emR~~k~vgvWPVglvg~----~~vEgP~  156 (261)
T d3cu0a1          81 PRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGG----LRFEGPQ  156 (261)
T ss_dssp             CCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHHTSCSSEEECCEEEETT----EEEEEEE
T ss_pred             ccCHHHHHHHHHHHHHcccccccccccccCCCceEEEEecCCCcccHHHHHHHhheeeeeeEEEEeecC----ccccccc
Confidence            89999999999999998             579999999999999999999999999999999999998    6799999


Q ss_pred             ecCCeEEEEEeCCCCCCCCCCccccceeeeeeccccCCCCCCCCCCcccccccccCCCcchhhHHHHhccCccceeecCC
Q 013414          325 CNGTRVIGWHVNEPRERFRRFHAEMSGFAFNSTILWDPKRWHRPTLEPIRQVVTVKDGFQASTFVEQIVEDESQMEGLLE  404 (443)
Q Consensus       325 c~~~kVvGW~t~~~~~~~R~fpIDMAGFAfNs~lLwdp~~w~rP~~~~~~~~~~~k~G~qEs~FL~qLv~d~~~lEpla~  404 (443)
                      |++|||+|||++|.  +.|+|||||||||||+++|||+++|.+|        ...++|||||+||+||+ |+++|||+|+
T Consensus       157 c~~gkVvgwht~w~--~~R~fpiDmAGFA~N~~lL~d~p~~~~~--------~~~~~G~~Es~fL~~L~-~~~~lEpl~~  225 (261)
T d3cu0a1         157 VQDGRVVGFHTAWE--PSRPFPVDMAGFAVALPLLLDKPNAQFD--------STAPRGHLESSLLSHLV-DPKDLEPRAA  225 (261)
T ss_dssp             EETTEEEEEECCSS--TTCSSCCCGGGEEEEHHHHHHCTTCCCC--------TTSCTTCHHHHHHTTTC-CGGGCEECHH
T ss_pred             ccCCeeeEEeccCC--CCCCCccceeeeeeehhhhhcCCccCCC--------CCCCCcchhhHHHHHhc-cHHhCeeccC
Confidence            99999999999987  5799999999999999999998777554        35788999999999995 7899999999


Q ss_pred             CCCEEEEeeCCCCCCCCCCCcccc-cCCCCcccc
Q 013414          405 ECSRIMAWLLPLESSNAFYPQKWF-LKNNLDVMA  437 (443)
Q Consensus       405 ~CskVLVWHtrte~p~l~yp~~w~-~~~~ld~~i  437 (443)
                      ||+||||||||||+|++++++++. .+...|..|
T Consensus       226 ~CskVlvWHtrte~p~l~~e~~l~~~g~~~~~~~  259 (261)
T d3cu0a1         226 NCTRVLVWHTRTEKPKMKQEEQLQRQGRGSDPAI  259 (261)
T ss_dssp             HHTCCCEECCCBCCCCCHHHHHHHTTTCCCCTTS
T ss_pred             CCCEEEEEEcccCCCCCCCHHHHHhcCCCCCCCc
Confidence            999999999999999999987763 334555443
>d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure