Citrus Sinensis ID: 013624

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------44
Protein Sequence
MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAKSRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVSGPISSGGPGSSSMKKTNSGPLNKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIPV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHHHHHcEEEEEccccccccccEEEEEEEEEEccccccccccccccEEEEEccEEEccccccccccccccccccccccccEEEEEEEEEEcccccEEEEEccccccEEEEEEccEEEEcccccccccHHHHHHHHccccccccccEEEEccccccccEEEEEEEEEEcccEEEEcccccccccccEEEEEccccccccEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHcccccccEEEEEEEEEcccccccccccccccEEEEEEEEEEEcccccccccccccccEccccHHHHHEEEEEEEccccccEEEEEcccccEEEEEEcccEEEEEccccccccHHHHHHHHHccccccccEEEEEccEEEcccEEEEEEEEEEcccEEEEEccccccccccHHHHEEccccEcEEEEEEcccccccEccc
Coil and Loop (DISEMBL)
mgsrypshqlsnglfvsgrpeqpkekaptmssvampytggdikksgelgkmfdipmdsaksrksgpitgapsrtgsfagaathsgsipnaagragynvsgpissggpgsssmkktnsgplnkhgepikkssgpqsggatrqnsgpippslpatglitsgpissgplnssgaprklsgsldssgsikmnsssiaQNQAVTtitqeddysfrknfpkpVLWLVILIFVMGFIAggfildtdlrtaksgqfvKVTGVvtcgnvplessfrrvprcvytstslyeyrawgskpanpkhrhftwglrsLERHVVDFYISDFQSGLRALVKtgsgarvtpfvddsvvidikpenkdlspEFIRWLGQKSLSSDDRLMRLKegyikegstvSVMGIVqrndnvlmivpppepiatgwqwtkcifpaSLEGIILRcedtsnndvipv
Flexible Loop (DISEMBL)
mgsrypshqlsnglfvsgRPEQPkekaptmssvampytggdikksgelGKMFDIPMDSAKSRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVSGPISSGGPGSSSMKKTNsgplnkhgepikkssgpqsGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLDSSGSIKMnsssiaqnqavTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILDTDLRTAKSGQFVKVTGVVTcgnvplessfrrvprcvYTSTSLYeyrawgskpanpkHRHFTWGLRSLERHVVDFYISDFQSGLRALVKtgsgarvtpfvddsvvidikpenkdlspefirwlgqkslssddrLMRLKegyikegstvsvMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILrcedtsnndvipv
Low Complexity Region (SEG)
MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAKSRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVsgpissggpgsssMKKTNSGPLNKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLDssgsikmnsssIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIPV
Disordered region (IsUnstruct)
*******************************************************************************************************************************************************************************************************TITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSL***DRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCE**********
Disordered Region (DISOPRED)
*************************************************************************************************************************************************************************************************************DYSFRKNFPKPVLWLVILIFVMGFIAGGFILDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTS***VIPV
Disordered Region (DISEMBL)
MGSRYPSHQLSNGLFVSGR***********SSVAMPYTGGDIKKSGELGKMFDIPMDSAKSRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVSGPI****************PLNKHGEPI****************GPIPPSLPATGLITSGPISSG*****************************QNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIPV
Disordered Region (DISPRO)
************************************************GK*FD*******************************************************************************************PIPPSLPATGLITS*PIS*********************************Q*VTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDV***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAKSRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVSGPISSGGPGSSSMKKTNSGPLNKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIPV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	439	2.2.26 [Sep-21-2011]
Q9FZ45	474	Uncharacterized membrane	no	no	0.984	0.911	0.713	0.0

>sp|Q9FZ45|Y1686_ARATH Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana GN=At1g16860 PE=1 SV=1

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/481 (71%), Positives = 381/481 (79%), Gaps = 49/481 (10%)

Query: 1   MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
           MGSRYPSHQLSNGLFVSGRPEQPKE+APTMS+VAMPYTGGDIK+SGELGKMFDIP D  K
Sbjct: 1   MGSRYPSHQLSNGLFVSGRPEQPKERAPTMSAVAMPYTGGDIKRSGELGKMFDIPADGTK 60

Query: 61  SRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVSGPISSGGPGSSSMKKTNSGPL 120
           SRKSGPI GAPSR+GSFAG A      P A GR    +SG ++S G  S SMKKTNSGPL
Sbjct: 61  SRKSGPIPGAPSRSGSFAGTAQSGPGAPMATGR----MSGSLASAG--SVSMKKTNSGPL 114

Query: 121 NKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLD 180
           +KHGEP+KKSSGPQSGG TRQNSG IP  LPATGLITSGPI+SGPLNSSGAPRK+SG LD
Sbjct: 115 SKHGEPLKKSSGPQSGGVTRQNSGSIP-ILPATGLITSGPITSGPLNSSGAPRKVSGPLD 173

Query: 181 SSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFIL---- 236
           SSG +K +  ++  NQAVTT+  EDD+S  K+FPKPVLWLV+LIF+MGF+AGGFIL    
Sbjct: 174 SSGLMKSHMPTVVHNQAVTTLGPEDDFSCLKSFPKPVLWLVVLIFIMGFLAGGFILGAVH 233

Query: 237 --------------------------------------DTDLRTAKSGQFVKVTGVVTCG 258
                                                 D DLRTAK+GQ VKVTGVVTCG
Sbjct: 234 NPILLVVVAILFTVVAALFIWNICWGRRGITDFIARYPDADLRTAKNGQHVKVTGVVTCG 293

Query: 259 NVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQS 318
           NVPLESSF RVPRCVYTST LYEYR WGSKPAN  HRHFTWGLRS ERHVVDFYISDFQS
Sbjct: 294 NVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANSSHRHFTWGLRSSERHVVDFYISDFQS 353

Query: 319 GLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYI 378
           GLRALVKTGSGA+VTP VDDSVVID K  ++ +SP+F+RWLG+K+L+SDDR+MRLKEGYI
Sbjct: 354 GLRALVKTGSGAKVTPLVDDSVVIDFKQGSEQVSPDFVRWLGKKNLTSDDRIMRLKEGYI 413

Query: 379 KEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIP 438
           KEGSTVSV+G+VQRNDNVLMIVP  EP+A GWQW +C FP SLEGI+LRCED+SN D IP
Sbjct: 414 KEGSTVSVIGVVQRNDNVLMIVPSSEPLAAGWQWRRCTFPTSLEGIVLRCEDSSNVDAIP 473

Query: 439 V 439
           V
Sbjct: 474 V 474

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	439
224097426	483	predicted protein [Populus trichocarpa]	1.0	0.908	0.755	0.0
356526336	487	PREDICTED: uncharacterized membrane prot	0.988	0.891	0.741	0.0
356521668	483	PREDICTED: uncharacterized membrane prot	0.988	0.898	0.743	0.0
224113259	485	predicted protein [Populus trichocarpa]	1.0	0.905	0.727	0.0
224097428	485	predicted protein [Populus trichocarpa]	1.0	0.905	0.729	0.0
224109978	469	predicted protein [Populus trichocarpa]	0.970	0.908	0.746	0.0
255544532	486	conserved hypothetical protein [Ricinus	1.0	0.903	0.728	0.0
388509912	483	unknown [Lotus japonicus]	1.0	0.908	0.703	0.0
356526298	485	PREDICTED: uncharacterized membrane prot	0.997	0.903	0.716	0.0
356523113	484	PREDICTED: uncharacterized membrane prot	0.995	0.902	0.713	0.0

>gi|224097426|ref|XP_002310929.1| predicted protein [Populus trichocarpa] gi|222850749|gb|EEE88296.1| predicted protein [Populus trichocarpa]

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/483 (75%), Positives = 409/483 (84%), Gaps = 44/483 (9%)

Query: 1   MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
           MGSRYPSH+L NGLFVSGRPEQPKEKAPTMSS AMPYTGGDIKKSGELGKMFDIP D +K
Sbjct: 1   MGSRYPSHRLGNGLFVSGRPEQPKEKAPTMSSTAMPYTGGDIKKSGELGKMFDIPTDGSK 60

Query: 61  SRKSGPITGAPSRTGSFAGAATHSGSI-PNAAGRAGYNVSGPISSGG-PGSSSMKKTNSG 118
           SRKSGPITG PSRTGSF GAA+ SGS+  NAA RAGY  SGP+SSGG PGS+S+KK++SG
Sbjct: 61  SRKSGPITGPPSRTGSFGGAASFSGSVMSNAALRAGYTTSGPLSSGGLPGSASLKKSSSG 120

Query: 119 PLNKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGS 178
           PLNKHGEP+KKSSGPQSGGATRQNSG IP  LPATGLITSGPISSGPLNS GAP+K+SG 
Sbjct: 121 PLNKHGEPVKKSSGPQSGGATRQNSGSIPSVLPATGLITSGPISSGPLNSFGAPKKVSGP 180

Query: 179 LDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFIL-- 236
           L+S+GS+K++SSSI+ N AVTT++Q+DDYS R+NFPK V+WLVILIFVMGF+AGGFIL  
Sbjct: 181 LESTGSMKLHSSSISNNPAVTTLSQDDDYSVRRNFPKTVVWLVILIFVMGFLAGGFILGA 240

Query: 237 ----------------------------------------DTDLRTAKSGQFVKVTGVVT 256
                                                   DTDLR AK+GQ+VKV+GVVT
Sbjct: 241 VHNAILLIVVVVLFVIVAGLVVWNTCWGRRYIMEFTARYPDTDLRAAKNGQYVKVSGVVT 300

Query: 257 CGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDF 316
           CGNVPLESSF+RVPRCVYTST LYEYRAWGSKPA+P HRHFTWGLRS ERHVVDFYISDF
Sbjct: 301 CGNVPLESSFQRVPRCVYTSTRLYEYRAWGSKPASPGHRHFTWGLRSSERHVVDFYISDF 360

Query: 317 QSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEG 376
           QSGLRALVKTGSG R+ PFVDDS+V+DI PE KDLSPEF+RWLG+K+LSSD+RLMRLKEG
Sbjct: 361 QSGLRALVKTGSGTRIIPFVDDSLVVDINPEKKDLSPEFVRWLGKKNLSSDERLMRLKEG 420

Query: 377 YIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDV 436
            IKEGSTVSVMGIVQRND++LMIV PPEP+ATGWQW++CIFPASL+GI+LRCEDTSN+DV
Sbjct: 421 CIKEGSTVSVMGIVQRNDSMLMIVAPPEPLATGWQWSRCIFPASLDGIVLRCEDTSNDDV 480

Query: 437 IPV 439
           IPV
Sbjct: 481 IPV 483

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526336|ref|XP_003531774.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Glycine max]

 Score =  719 bits (1857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/483 (74%), Positives = 397/483 (82%), Gaps = 49/483 (10%)

Query: 1   MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
           MGSR+PSHQLSNGL+VSGRPEQPKEK PTMSSVAMPYTGGDIK+SGELGKMFDIPMD +K
Sbjct: 1   MGSRFPSHQLSNGLYVSGRPEQPKEKTPTMSSVAMPYTGGDIKRSGELGKMFDIPMDGSK 60

Query: 61  SRKSGPITGAPSRTGSFAGAATHSGSI-PNAAGRAGYNVSGPISSGG-PGSSSMKKTNSG 118
           SRKSGPI+ APSRTGSFAGAA+HSG I  NAA R+ Y  SG +S+GG   S+SMKKTNSG
Sbjct: 61  SRKSGPISNAPSRTGSFAGAASHSGPIMQNAAARSAYITSGNVSTGGMSASASMKKTNSG 120

Query: 119 PLNKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGS 178
           PLNKHGEP+KKSSGPQSGG TRQNSGPIPP LP TGLITSGP     LNSSGAPRK+SG 
Sbjct: 121 PLNKHGEPVKKSSGPQSGGVTRQNSGPIPPVLPTTGLITSGP-----LNSSGAPRKVSGQ 175

Query: 179 LDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFIL-- 236
           LDS+GS+K +SS +A N AVTT++ +D+YSFR+NFPKP+LW VILIFVMGFIAGGFIL  
Sbjct: 176 LDSTGSMKSHSSFVAHNPAVTTLSLDDEYSFRRNFPKPILWSVILIFVMGFIAGGFILGA 235

Query: 237 ----------------------------------------DTDLRTAKSGQFVKVTGVVT 256
                                                   D +LRTAK+GQFVKV+GVVT
Sbjct: 236 VRNAILLIVVVILFGAVAALFTWNSCFGRKAIVGFISRYPDAELRTAKNGQFVKVSGVVT 295

Query: 257 CGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDF 316
           CGNVPLESSF++VPRCVYTSTSLYEYR W SK ANPKHR FTWGLR+ ERHVVDFYISDF
Sbjct: 296 CGNVPLESSFQKVPRCVYTSTSLYEYRGWDSKAANPKHRRFTWGLRAAERHVVDFYISDF 355

Query: 317 QSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEG 376
           QSGLRALVKTG GARVTP+VDDSVVID+ P NKD+SPEF+RWLG++ LSSDDR+M+LKEG
Sbjct: 356 QSGLRALVKTGYGARVTPYVDDSVVIDVNPANKDMSPEFLRWLGERKLSSDDRIMQLKEG 415

Query: 377 YIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDV 436
           YIKEGSTVSVMG+VQRNDNVLMIVPPPEP+ TG QW KCIFPASLEGI+LRCEDTS  DV
Sbjct: 416 YIKEGSTVSVMGVVQRNDNVLMIVPPPEPLTTGCQWAKCIFPASLEGIVLRCEDTSKIDV 475

Query: 437 IPV 439
           IPV
Sbjct: 476 IPV 478

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521668|ref|XP_003529475.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Glycine max]

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/483 (74%), Positives = 396/483 (81%), Gaps = 49/483 (10%)

Query: 1   MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
           MGSR+PSHQLSNGL+VSGRPEQPKEK PTMSSVAMPYTGGDIKKSGELGKMFDIPMD +K
Sbjct: 1   MGSRFPSHQLSNGLYVSGRPEQPKEKTPTMSSVAMPYTGGDIKKSGELGKMFDIPMDGSK 60

Query: 61  SRKSGPITGAPSRTGSFAGAATHSGSI-PNAAGRAGYNVSGPISSGG-PGSSSMKKTNSG 118
           SRKSGPI  APSRTGSFAGAA+HSG I  NAA R+ Y  SG +S+GG   S+SMKKTNSG
Sbjct: 61  SRKSGPINNAPSRTGSFAGAASHSGPIMQNAAARSVYITSGNVSAGGMSASASMKKTNSG 120

Query: 119 PLNKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGS 178
           PLNKHGEP+KKSSGPQSGG TRQNSGPIPP LP TGLITSGP     LNSSGAPRK+SG 
Sbjct: 121 PLNKHGEPVKKSSGPQSGGVTRQNSGPIPPVLPTTGLITSGP-----LNSSGAPRKVSGQ 175

Query: 179 LDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFIL-- 236
           LDS+GS+K  SS +A N AVTT++ +D+YSFRKNFPKP+LW VILIFVMGFIAGGFIL  
Sbjct: 176 LDSTGSMKSLSSFVAHNPAVTTLSLDDEYSFRKNFPKPILWSVILIFVMGFIAGGFILGA 235

Query: 237 ----------------------------------------DTDLRTAKSGQFVKVTGVVT 256
                                                   D +LRTAK+GQFVKV+GVVT
Sbjct: 236 VHNAILLIVVVILFGAVAALFTWNSCFGRKAIVGFISRYPDAELRTAKNGQFVKVSGVVT 295

Query: 257 CGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDF 316
           CGNVPLESSF++VPRCVYTSTSLYEYR W SK ANPKHR FTWGLR+ ERHVVDFYISDF
Sbjct: 296 CGNVPLESSFQKVPRCVYTSTSLYEYRGWDSKAANPKHRRFTWGLRAAERHVVDFYISDF 355

Query: 317 QSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEG 376
           QSGLRALVKTG GARVTP+VDDS+VID+ P NKD+SPEF+RWLG++ LSSDDR+M+LKEG
Sbjct: 356 QSGLRALVKTGYGARVTPYVDDSIVIDVNPANKDMSPEFLRWLGERKLSSDDRIMQLKEG 415

Query: 377 YIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDV 436
           YIKEGSTVSVMG+VQRNDNVLMIVPPPEP++TG QW KCIFPASLEGI+LRCEDTS  DV
Sbjct: 416 YIKEGSTVSVMGVVQRNDNVLMIVPPPEPLSTGCQWAKCIFPASLEGIVLRCEDTSKIDV 475

Query: 437 IPV 439
           IPV
Sbjct: 476 IPV 478

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113259|ref|XP_002316439.1| predicted protein [Populus trichocarpa] gi|222865479|gb|EEF02610.1| predicted protein [Populus trichocarpa]

 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/485 (72%), Positives = 400/485 (82%), Gaps = 46/485 (9%)

Query: 1   MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
           MGSR+PSHQLSNGL+VSGRPEQPKE+APTMSSVAMPYTGGDIKKSGELGKMFDIP+D +K
Sbjct: 1   MGSRFPSHQLSNGLYVSGRPEQPKERAPTMSSVAMPYTGGDIKKSGELGKMFDIPVDGSK 60

Query: 61  SRKSGPITGAPSRTGSFAGAATHSGSI-PNAAGRAGYNVSGPISSGGPGSSSMKKTNSGP 119
           SRKSGPITGAPSRTGSF GAA+HSG I PNAA RA +  SG +SSGG GS+S+KK+NSGP
Sbjct: 61  SRKSGPITGAPSRTGSFGGAASHSGPIMPNAAARAAHTTSGAMSSGGTGSASLKKSNSGP 120

Query: 120 LNKHGEPIKKSSGPQSGGAT---RQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLS 176
           LNKHGEP+KK SGPQSGG T   RQNSGPIPP LP TGLITSGPISSGPLNSSGAPRK+S
Sbjct: 121 LNKHGEPVKKLSGPQSGGVTPSGRQNSGPIPPVLPTTGLITSGPISSGPLNSSGAPRKVS 180

Query: 177 GSLDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFIL 236
           G L+S GS+K+  S+I  NQAVT ++Q+DD+SFRK FPK +LW +IL+F+MGFIAGGFIL
Sbjct: 181 GPLESMGSMKIPGSAILHNQAVTVLSQDDDFSFRKTFPKLILWSLILLFLMGFIAGGFIL 240

Query: 237 ------------------------------------------DTDLRTAKSGQFVKVTGV 254
                                                     D +LR AK+GQFVK++GV
Sbjct: 241 AAVHNAILLIVVVVLFGAVTSLFIWNTCFGRKAIMAYIARYPDAELRNAKNGQFVKISGV 300

Query: 255 VTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYIS 314
           VTCGNVPLESSF+R+PRCVYTSTSLYEYR W SK ANP HR F+WGLRSLER  VDFYIS
Sbjct: 301 VTCGNVPLESSFQRIPRCVYTSTSLYEYRGWDSKAANPTHRRFSWGLRSLERRAVDFYIS 360

Query: 315 DFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLK 374
           DFQSGLRALVKTG GARVTP+VDDS+VID+ P  ++LSPEFI+WLG+++LSSDDR+MR+K
Sbjct: 361 DFQSGLRALVKTGYGARVTPYVDDSLVIDVNPGTEELSPEFIKWLGERNLSSDDRIMRMK 420

Query: 375 EGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNN 434
           EGYIKEGSTVSVMG+VQRN+NVLMIVPPPEPI +G QWTKCIFPASLEGI+LRCEDTS N
Sbjct: 421 EGYIKEGSTVSVMGVVQRNENVLMIVPPPEPITSGCQWTKCIFPASLEGIVLRCEDTSKN 480

Query: 435 DVIPV 439
           DVIPV
Sbjct: 481 DVIPV 485

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097428|ref|XP_002310930.1| predicted protein [Populus trichocarpa] gi|222850750|gb|EEE88297.1| predicted protein [Populus trichocarpa]

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/485 (72%), Positives = 397/485 (81%), Gaps = 46/485 (9%)

Query: 1   MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
           MGSR+PSHQLSNGL+VSGRPEQPKE+APTMSSVAMPYTGGDIK+SGELGKMFDIP+D +K
Sbjct: 1   MGSRFPSHQLSNGLYVSGRPEQPKERAPTMSSVAMPYTGGDIKRSGELGKMFDIPVDGSK 60

Query: 61  SRKSGPITGAPSRTGSFAGAATHSGSI-PNAAGRAGYNVSGPISSGGPGSSSMKKTNSGP 119
           SRKSGPITGAPSRTGSF GAA+HSG I PNAA RA Y  SG +SSGG GS S+KK+NSGP
Sbjct: 61  SRKSGPITGAPSRTGSFGGAASHSGPIMPNAAARAAYTTSGAVSSGGTGSVSLKKSNSGP 120

Query: 120 LNKHGEPIKKSSGPQSGGAT---RQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLS 176
           LNKHGEP+KKSSGPQSGG T   RQNSGPIPP LP TGLITSGPISSGPLNSSGAPRK+S
Sbjct: 121 LNKHGEPVKKSSGPQSGGVTPSGRQNSGPIPPVLPTTGLITSGPISSGPLNSSGAPRKVS 180

Query: 177 GSLDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFIL 236
           G L+S GS+K    ++  NQAVT ++Q+DD+SFRKNFPK +LW +IL+FVMGFIAGGFIL
Sbjct: 181 GPLESMGSMKNPGYAVIHNQAVTVLSQDDDFSFRKNFPKLILWSLILLFVMGFIAGGFIL 240

Query: 237 ------------------------------------------DTDLRTAKSGQFVKVTGV 254
                                                     D +LR AK+GQFVK++GV
Sbjct: 241 GAVHNAILLIVVVVLFGAVASFFIWNTCFGRRAIMAYIARYPDAELRNAKNGQFVKISGV 300

Query: 255 VTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYIS 314
           VTCGNVPLESSF+RVPRCVYTSTSLYEYR W SK ANP HR F+WGLRSLER  VDFYIS
Sbjct: 301 VTCGNVPLESSFQRVPRCVYTSTSLYEYRGWDSKAANPTHRRFSWGLRSLERRAVDFYIS 360

Query: 315 DFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLK 374
           DFQSGLRALVKTG GARVTP+VDDS+VID  P  ++LSP+F++WLG+++LSSDDR+MR+K
Sbjct: 361 DFQSGLRALVKTGYGARVTPYVDDSLVIDANPGAEELSPDFVKWLGERNLSSDDRIMRMK 420

Query: 375 EGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNN 434
           EGYIKEGSTVSVMG+VQRNDNVLMIVPPPEPI TG QW KCIFPASLEGI+LRCEDTS N
Sbjct: 421 EGYIKEGSTVSVMGVVQRNDNVLMIVPPPEPITTGCQWAKCIFPASLEGIVLRCEDTSKN 480

Query: 435 DVIPV 439
           DVIPV
Sbjct: 481 DVIPV 485

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109978|ref|XP_002315374.1| predicted protein [Populus trichocarpa] gi|222864414|gb|EEF01545.1| predicted protein [Populus trichocarpa]

 Score =  712 bits (1839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/482 (74%), Positives = 396/482 (82%), Gaps = 56/482 (11%)

Query: 1   MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
           MGSRYPSH+L NGL VSGRPEQPKEKAPTMSS AMPYTGGDIKKSGELGKMF IP + +K
Sbjct: 1   MGSRYPSHRLGNGLVVSGRPEQPKEKAPTMSSAAMPYTGGDIKKSGELGKMF-IPTEGSK 59

Query: 61  SRKSGPITGAPSRTGSFAGAATHSGSI-PNAAGRAGYNVSGPISSGGPGSSSMKKTNSGP 119
           SRKSGPITG PSRTGSFAGAA+HSGS+  NAA R             PGS+S+KK++SGP
Sbjct: 60  SRKSGPITGPPSRTGSFAGAASHSGSMMSNAASRL------------PGSASLKKSSSGP 107

Query: 120 LNKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSL 179
           LNKHGEPIKKSSGPQSGG TRQNSG IP +LPATGLITSGPISSGPLNSSGAPRK+SG L
Sbjct: 108 LNKHGEPIKKSSGPQSGGVTRQNSGSIPSALPATGLITSGPISSGPLNSSGAPRKVSGPL 167

Query: 180 DSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFIL--- 236
           +S+GS+K+NSSSI+ N AVTT++Q+DDYS RKNFPK V+WLVILIFVMG +AGGFIL   
Sbjct: 168 ESTGSMKLNSSSISNNPAVTTLSQDDDYSVRKNFPKTVVWLVILIFVMGLLAGGFILGAV 227

Query: 237 ---------------------------------------DTDLRTAKSGQFVKVTGVVTC 257
                                                  D DLRTAK+GQ+VKV+GVVTC
Sbjct: 228 HNAILLVVVVVLFVIVAALVVWNMCGGRRYIVEFTARYPDADLRTAKNGQYVKVSGVVTC 287

Query: 258 GNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQ 317
           GNVPLESSF+RVPRCVYTST LYEYRAWGSKPANP HRHFTWGLRS ERHVVDFYISDFQ
Sbjct: 288 GNVPLESSFQRVPRCVYTSTRLYEYRAWGSKPANPSHRHFTWGLRSSERHVVDFYISDFQ 347

Query: 318 SGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGY 377
           SGLRALVKTG+G R TPFVDDS+V DI PE KDLSPEF+RWLG+K+LS D+RLMRLKEGY
Sbjct: 348 SGLRALVKTGNGTRTTPFVDDSLVADINPEKKDLSPEFVRWLGKKNLSGDERLMRLKEGY 407

Query: 378 IKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVI 437
           IKEGSTVSVMGIVQRNDNVLMIV PPEP+ATGWQW +CIFPASL+GI+LRCEDTSN+DVI
Sbjct: 408 IKEGSTVSVMGIVQRNDNVLMIVTPPEPLATGWQWPRCIFPASLDGIVLRCEDTSNDDVI 467

Query: 438 PV 439
           PV
Sbjct: 468 PV 469

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544532|ref|XP_002513327.1| conserved hypothetical protein [Ricinus communis] gi|223547235|gb|EEF48730.1| conserved hypothetical protein [Ricinus communis]

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/486 (72%), Positives = 397/486 (81%), Gaps = 47/486 (9%)

Query: 1   MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
           MGSR+PSHQLSNGL+VSGRPEQPKE+ PTMSSVAMPYTGGDIKKSGELGKMFDIP+D +K
Sbjct: 1   MGSRFPSHQLSNGLYVSGRPEQPKERPPTMSSVAMPYTGGDIKKSGELGKMFDIPVDGSK 60

Query: 61  SRKSGPITGAPSRTGSFAGAATHSGSI-PNAAGRAGYNVSGPISSGGPGSSS-MKKTNSG 118
           SRKSGPITGAPSRTGSF GAA+HSG I PNAA RA Y  SG  SSGG   S+ +KK+NSG
Sbjct: 61  SRKSGPITGAPSRTGSFGGAASHSGPIMPNAAARAAYTTSGAASSGGVSGSASLKKSNSG 120

Query: 119 PLNKHGEPIKKSSGPQSGGAT---RQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKL 175
           PLN+HG+P+KKSSGPQSGG T   RQNSGP+PP LPATGLITSGPISSGPLNSSGAPRK+
Sbjct: 121 PLNRHGDPVKKSSGPQSGGVTPSGRQNSGPLPPVLPATGLITSGPISSGPLNSSGAPRKV 180

Query: 176 SGSLDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFI 235
           SG L+S GS+K+  S++  NQAVT +TQEDD+SFRKNFPKP+LW +IL+FVMGFIAGGFI
Sbjct: 181 SGPLESMGSMKLPGSAVVHNQAVTILTQEDDFSFRKNFPKPILWSLILLFVMGFIAGGFI 240

Query: 236 L------------------------------------------DTDLRTAKSGQFVKVTG 253
           L                                          D +LR AK+GQFVK++G
Sbjct: 241 LGAVHNAILLIVVVILFGAVAGLFIWNTFFGRKAIMGFIARYPDAELRNAKNGQFVKISG 300

Query: 254 VVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYI 313
           VVTCGNVPLESSF++VPRCVYTSTSLYEYR W SK ANP HR FTWGLRSLER  VDFYI
Sbjct: 301 VVTCGNVPLESSFQKVPRCVYTSTSLYEYRGWDSKAANPTHRRFTWGLRSLERRAVDFYI 360

Query: 314 SDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRL 373
           SDFQSGLRALVKTG  ARVTP+VDDS+VID+ P  ++LSPEFIRWLG+++LS DDR+MR+
Sbjct: 361 SDFQSGLRALVKTGYAARVTPYVDDSLVIDVNPSTEELSPEFIRWLGERNLSRDDRIMRM 420

Query: 374 KEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSN 433
           KEGYIKEGSTVSVMG+VQRNDNVLMIVPPPEPI TG QW KCIFPASL+GI+LRCEDTS 
Sbjct: 421 KEGYIKEGSTVSVMGVVQRNDNVLMIVPPPEPITTGCQWPKCIFPASLDGIVLRCEDTSK 480

Query: 434 NDVIPV 439
           NDVIPV
Sbjct: 481 NDVIPV 486

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388509912|gb|AFK43022.1| unknown [Lotus japonicus]

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/483 (70%), Positives = 391/483 (80%), Gaps = 44/483 (9%)

Query: 1   MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
           M SR PSHQLSNGL+VSGRPEQPKE+ PT +S A+PYTGGDIK+SGELGKMFDIP D +K
Sbjct: 1   MASRIPSHQLSNGLYVSGRPEQPKERTPTKTSTAVPYTGGDIKRSGELGKMFDIPTDGSK 60

Query: 61  SRKSGPITGAPSRTGSFAGAATHSGSI-PNAAGRAGYNVSGPISSGG-PGSSSMKKTNSG 118
           SRKSGP+TGAPSRTGSF GA +HSG I PNAA RA Y  SGP++SGG PGS+S KK+NSG
Sbjct: 61  SRKSGPLTGAPSRTGSFGGAGSHSGPIQPNAAARAAYTTSGPMTSGGMPGSTSTKKSNSG 120

Query: 119 PLNKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGS 178
           PLNKHGEP+KKSSGPQSGG T QNSGP+ P LP TGLITSGPISSGPLNSSGAPRK+SG 
Sbjct: 121 PLNKHGEPLKKSSGPQSGGVTCQNSGPLAPILPTTGLITSGPISSGPLNSSGAPRKVSGP 180

Query: 179 LDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFIL-- 236
           L+++GS+K+  S+   NQAVT ++Q+++YSFR+NFPK +LWL+IL+FVMGFIAGGFIL  
Sbjct: 181 LETTGSMKLQGSAAVHNQAVTVLSQDNEYSFRRNFPKAMLWLLILLFVMGFIAGGFILGA 240

Query: 237 ----------------------------------------DTDLRTAKSGQFVKVTGVVT 256
                                                   D++LRTAK+GQFVK +GVVT
Sbjct: 241 VHNAILLVVVVVLFGLVAASFTWNTYWGRRAIMGFITHYPDSELRTAKNGQFVKASGVVT 300

Query: 257 CGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDF 316
           CGNVPLESSF+++PRCVYTSTSLYEYR W SK ANP HR FTWGLR LER +VDFYISDF
Sbjct: 301 CGNVPLESSFQKIPRCVYTSTSLYEYRGWDSKAANPTHRQFTWGLRYLERRLVDFYISDF 360

Query: 317 QSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEG 376
           QSGLRALVKTG GARVTP+VDDSV+I + P  ++LSPEF+RWLG+++LSSDDR MR +EG
Sbjct: 361 QSGLRALVKTGHGARVTPYVDDSVLISVNPTKEELSPEFLRWLGERNLSSDDRTMRWEEG 420

Query: 377 YIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDV 436
           YIKEGSTVSVMG+VQRN+NVLMIVPPPEPI  G QWTKCIFPASLEGI+LRCED S NDV
Sbjct: 421 YIKEGSTVSVMGVVQRNENVLMIVPPPEPITMGCQWTKCIFPASLEGIVLRCEDMSKNDV 480

Query: 437 IPV 439
           IPV
Sbjct: 481 IPV 483

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526298|ref|XP_003531755.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Glycine max]

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/486 (71%), Positives = 395/486 (81%), Gaps = 48/486 (9%)

Query: 1   MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
           MGSR PSH+LSNGL+VSGRPEQPKE+ PTM+S A+PYTGGDIKKSGELGKMFDIP+D +K
Sbjct: 1   MGSRIPSHKLSNGLYVSGRPEQPKERTPTMTSTAVPYTGGDIKKSGELGKMFDIPVDGSK 60

Query: 61  SRKSGPITGAPSRTGSFAGAATHSGSI-PNAAGRAGYNVSGPISSGG-PGSSSMKKTNSG 118
           SRKSGPITGAPSRTGSF GA +HSG I PNAA RA Y  SGP++SGG  GS+SMKK+NSG
Sbjct: 61  SRKSGPITGAPSRTGSFGGAGSHSGPIQPNAAARAAYTTSGPMTSGGMAGSTSMKKSNSG 120

Query: 119 PLNKHGEPIKKSSGPQSGGAT---RQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKL 175
           PLNKHGEP+KKSSGPQSGG T   RQNSGP+ P LP TGLITSGPISSGPLNSSGAPRK+
Sbjct: 121 PLNKHGEPVKKSSGPQSGGVTPVGRQNSGPLAPVLPTTGLITSGPISSGPLNSSGAPRKV 180

Query: 176 SGSLDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFI 235
           SG L+++GS+K+  S+   NQAVT ++Q DD SFR+NFPK VLWL+IL+FVMGFIAGGFI
Sbjct: 181 SGPLEATGSMKLQGSAAVHNQAVTVLSQGDD-SFRRNFPKAVLWLLILLFVMGFIAGGFI 239

Query: 236 L------------------------------------------DTDLRTAKSGQFVKVTG 253
           L                                          D++LRTAK+GQFVKV+G
Sbjct: 240 LGAVHNAILLIVVVVLFGLVAASFTWNTYWGRRSIMGFVAHYPDSELRTAKNGQFVKVSG 299

Query: 254 VVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYI 313
           VVTCGNVPLESSF++VPRCVYTSTSLYEYR W SK ANP HR  TWGLR LER VVDFYI
Sbjct: 300 VVTCGNVPLESSFQKVPRCVYTSTSLYEYRGWNSKAANPTHRRLTWGLRLLERRVVDFYI 359

Query: 314 SDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRL 373
           SDFQSGLRALVKTG GARVTP+VDDSV+I++ P  ++L PEF+RWL +++LSSDDR+MRL
Sbjct: 360 SDFQSGLRALVKTGHGARVTPYVDDSVLINVNPTKEELPPEFLRWLEERNLSSDDRIMRL 419

Query: 374 KEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSN 433
           +EGYIKEGSTVSVMGIVQRN+NVLMIVPPP+PI TG QWTKCIFPASLEGI+LRCED S 
Sbjct: 420 EEGYIKEGSTVSVMGIVQRNENVLMIVPPPDPITTGCQWTKCIFPASLEGIVLRCEDASK 479

Query: 434 NDVIPV 439
           NDVIPV
Sbjct: 480 NDVIPV 485

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523113|ref|XP_003530186.1| PREDICTED: uncharacterized membrane protein At1g16860 [Glycine max]

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/486 (71%), Positives = 397/486 (81%), Gaps = 49/486 (10%)

Query: 1   MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
           MGSR PSH+LSNGL+VSGRPEQPKE+ PTM+S A+PYTGGDIKKSGELGKMFDIP+D +K
Sbjct: 1   MGSRIPSHKLSNGLYVSGRPEQPKERTPTMTSTAVPYTGGDIKKSGELGKMFDIPVDGSK 60

Query: 61  SRKSGPITGAPSRTGSFAGAATHSGSI-PNAAGRAGYNVSGPISSGG-PGSSSMKKTNSG 118
           SRKSGPITGAPSRTGSF GA +HSG + PNAA RA Y  SGP++SGG  GS+SMKK+NSG
Sbjct: 61  SRKSGPITGAPSRTGSFGGAGSHSGPMQPNAAARATYT-SGPMTSGGMAGSTSMKKSNSG 119

Query: 119 PLNKHGEPIKKSSGPQSGGAT---RQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKL 175
           PLNKHGEP+KKSSGPQSGG T   RQNSGP+ P LP TGLITSGPISSGPLNSSGAPRK+
Sbjct: 120 PLNKHGEPVKKSSGPQSGGVTPVGRQNSGPLAPVLPTTGLITSGPISSGPLNSSGAPRKV 179

Query: 176 SGSLDSSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFI 235
           SG L+++GS+K+  S+   NQAVT ++Q DD SFR+NFPK VLWL+IL+FVMGFIAGGFI
Sbjct: 180 SGPLEATGSMKLQGSAAVHNQAVTVLSQGDD-SFRRNFPKAVLWLLILLFVMGFIAGGFI 238

Query: 236 L------------------------------------------DTDLRTAKSGQFVKVTG 253
           L                                          D++LRTAK+GQFVKV+G
Sbjct: 239 LGAVHNAILLIVVVILFGLVAASFTWNTYWGRRSIMGFVTHYPDSELRTAKNGQFVKVSG 298

Query: 254 VVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYI 313
           VVTCGNVPLESSF++VPRCVYTSTSLYEYR W SK ANP HR  TWGLR LER VVDFYI
Sbjct: 299 VVTCGNVPLESSFQKVPRCVYTSTSLYEYRGWDSKAANPAHRRLTWGLRLLERRVVDFYI 358

Query: 314 SDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRL 373
           SDFQSGLRALVKTG GARVTP+VDDSV+I++ P  ++LSPEF+RWLG+++LSSDDR+MRL
Sbjct: 359 SDFQSGLRALVKTGHGARVTPYVDDSVLINVNPTKEELSPEFLRWLGERNLSSDDRIMRL 418

Query: 374 KEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSN 433
           +EGYIKEGSTVSVMG+VQRN+NVLMIVPPP+PI TG QWTKCIFP+SLEGI+LRCED S 
Sbjct: 419 EEGYIKEGSTVSVMGVVQRNENVLMIVPPPDPITTGCQWTKCIFPSSLEGIVLRCEDASK 478

Query: 434 NDVIPV 439
           NDVIPV
Sbjct: 479 NDVIPV 484

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	439
TAIR|locus:2015646	474	AT1G16860 [Arabidopsis thalian	0.462	0.428	0.812	5.7e-178
TAIR|locus:2037533	468	AT1G78880 "AT1G78880" [Arabido	0.462	0.433	0.817	7.2e-178
TAIR|locus:2132075	445	AT4G22290 "AT4G22290" [Arabido	0.462	0.456	0.645	1.6e-94

TAIR|locus:2015646 AT1G16860 [Arabidopsis thaliana (taxid:3702)]

 Score = 900 (321.9 bits), Expect = 5.7e-178, Sum P(2) = 5.7e-178
 Identities = 165/203 (81%), Positives = 182/203 (89%)

Query:   237 DTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRH 296
             D DLRTAK+GQ VKVTGVVTCGNVPLESSF RVPRCVYTST LYEYR WGSKPAN  HRH
Sbjct:   272 DADLRTAKNGQHVKVTGVVTCGNVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANSSHRH 331

Query:   297 FTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFI 356
             FTWGLRS ERHVVDFYISDFQSGLRALVKTGSGA+VTP VDDSVVID K  ++ +SP+F+
Sbjct:   332 FTWGLRSSERHVVDFYISDFQSGLRALVKTGSGAKVTPLVDDSVVIDFKQGSEQVSPDFV 391

Query:   357 RWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCI 416
             RWLG+K+L+SDDR+MRLKEGYIKEGSTVSV+G+VQRNDNVLMIVP  EP+A GWQW +C 
Sbjct:   392 RWLGKKNLTSDDRIMRLKEGYIKEGSTVSVIGVVQRNDNVLMIVPSSEPLAAGWQWRRCT 451

Query:   417 FPASLEGIILRCEDTSNNDVIPV 439
             FP SLEGI+LRCED+SN D IPV
Sbjct:   452 FPTSLEGIVLRCEDSSNVDAIPV 474

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2037533 AT1G78880 "AT1G78880" [Arabidopsis thaliana (taxid:3702)]

 Score = 911 (325.7 bits), Expect = 7.2e-178, Sum P(2) = 7.2e-178
 Identities = 166/203 (81%), Positives = 184/203 (90%)

Query:   237 DTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRH 296
             D DLRTAK+GQ+VKVTGVVTCGNVPLESSF RVPRCVYTST LYEYR WGSKPAN  HR 
Sbjct:   266 DADLRTAKNGQYVKVTGVVTCGNVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANASHRR 325

Query:   297 FTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFI 356
             FTWGLRS ERHVVDFYISDFQSGLRALVKTG+GA+VTP VDDSVVID KP N+  SP+F+
Sbjct:   326 FTWGLRSAERHVVDFYISDFQSGLRALVKTGNGAKVTPLVDDSVVIDFKPGNEQASPDFV 385

Query:   357 RWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCI 416
             RWLG+K+L++DDR+MRLKEGYIKEGSTVSV+G+VQRNDNVLMIVP  EP+A GWQW+KC 
Sbjct:   386 RWLGKKNLTNDDRIMRLKEGYIKEGSTVSVIGVVQRNDNVLMIVPTTEPLAAGWQWSKCT 445

Query:   417 FPASLEGIILRCEDTSNNDVIPV 439
             FPASLEGI+LRCED+SN D IPV
Sbjct:   446 FPASLEGIVLRCEDSSNVDAIPV 468

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2132075 AT4G22290 "AT4G22290" [Arabidopsis thaliana (taxid:3702)]

 Score = 729 (261.7 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
 Identities = 131/203 (64%), Positives = 165/203 (81%)

Query:   237 DTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRH 296
             D +LR A  GQFVKVTGVVTCG++PLESSF+R PRCVY ST LYEY+ +G K ANPKHR 
Sbjct:   243 DAELRGAIDGQFVKVTGVVTCGSIPLESSFQRTPRCVYVSTELYEYKGFGGKSANPKHRC 302

Query:   297 FTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFI 356
             F+WG R  E++V DFYISDFQSGLRALVK G G++V+PFV  + V ++  +NKDLSP F+
Sbjct:   303 FSWGSRHAEKYVSDFYISDFQSGLRALVKAGYGSKVSPFVKPATVANVTTQNKDLSPSFL 362

Query:   357 RWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCI 416
             +WL  ++LS+DDR+MRLKEGYIKEGSTVSVMG+V+R+DNVLMIVPP E +++G +W  C+
Sbjct:   363 KWLSDRNLSADDRVMRLKEGYIKEGSTVSVMGMVRRHDNVLMIVPPAEAVSSGCRWWHCL 422

Query:   417 FPASLEGIILRCEDTSNNDVIPV 439
             FP   +G+I+ C+D  N DVIPV
Sbjct:   423 FPTYADGLIITCDDNQNADVIPV 445

GO:0004221 "ubiquitin thiolesterase activity" evidence=ISS

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FZ45	Y1686_ARATH	No assigned EC number	0.7130	0.9840	0.9113	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	439
PF12483	160	GIDE: E3 Ubiquitin ligase; InterPro: IPR022170 Thi	97.89

>PF12483 GIDE: E3 Ubiquitin ligase; InterPro: IPR022170 This domain family is found in bacteria, archaea and eukaryotes, and is typically between 150 and 163 amino acids in length

Probab=97.89  E-value=0.00012  Score=65.24  Aligned_cols=117  Identities=21%  Similarity=0.264  Sum_probs=75.3

Q ss_pred             eeeeeecCCCCCCCCCCccccccceeeeeeeecEEEEecCCceeEEE-EeCCCCeeeeeeecceEEecCCCCCCCCHHHH
Q 013624          278 SLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALV-KTGSGARVTPFVDDSVVIDIKPENKDLSPEFI  356 (439)
Q Consensus       278 ~LyE~rgw~~k~an~kh~~f~W~lr~~Er~~~DFYIsD~~SG~RALV-KaG~GakVtp~V~e~~vv~~~~~~kdlS~~f~  356 (439)
                      +.++++.|. + ..  ...-.|++.+..+..+.||+.|  ..-|.+| ....++.+.--.+-+......   ......+.
T Consensus         2 e~~~~~~~~-~-~~--~~~~~~~~v~~~~~~vPF~L~D--~tg~v~V~~~p~~a~l~l~~v~~~f~p~~---~~~~~~~~   72 (160)
T PF12483_consen    2 EVVEKRESN-K-SR--RWSSSWRTVSSGTSEVPFYLED--GTGRVRVVDDPEGAELDLETVYDRFEPSP---SSPPDGLF   72 (160)
T ss_pred             eEEEEEEcc-c-CC--cccccEEEEEcceeEcCEEEEC--CceEEEEecCcccCccceeeEEEEeEECC---CCccceee
Confidence            356677665 3 21  1223499999999999999999  3455555 566666554323333322211   23444444


Q ss_pred             HHhhhcC-CCCCCceeEEeeeeeeeCCEEEEEEEEE-ecCceeeEeCCCCc
Q 013624          357 RWLGQKS-LSSDDRLMRLKEGYIKEGSTVSVMGIVQ-RNDNVLMIVPPPEP  405 (439)
Q Consensus       357 ~WL~erN-LSsd~r~mRlkEGyIkEGstvSVmGvvk-r~~~~~mi~~p~e~  405 (439)
                      .|+..+- +.  .+=.||+|-.|.+|++|.|+|.+. ..|..++|-+|.+.
T Consensus        73 ~~~~~~~~~~--~~G~r~~E~~L~~G~~ltvvGe~~~~~~g~~~i~~p~~g  121 (160)
T PF12483_consen   73 GFFSGERELE--PKGYRYTEEILPVGTPLTVVGELVRDGDGNLVIQPPKDG  121 (160)
T ss_pred             eeeccceecc--ccccEEEEEEcCCCCEEEEEEEEEEcCCCcEEEeCCCCC
Confidence            4443322 11  334799999999999999999994 55668999998886

There is a single completely conserved residue E that may be functionally important. GIDE is an E3 ubiquitin ligase which is involved in inducing apoptosis. ; GO: 0016881 acid-amino acid ligase activity

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	439
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 4e-04
 Identities = 47/341 (13%), Positives = 104/341 (30%), Gaps = 116/341 (34%)

Query: 170 GAPRKLSGSLDSSGSIKMNSSSIAQNQAVTTITQEDDYSF-----RKNFPKP-------- 216
            +   +SG+L    ++      + Q + V  + +  +Y F     +    +P        
Sbjct: 56  MSKDAVSGTLRLFWTLLSKQEEMVQ-KFVEEVLR-INYKFLMSPIKTEQRQPSMMTRMYI 113

Query: 217 ----VLWLVILIFVMGFIAGGFILD--TDLRTA----KSGQFVKVTGVVTCG-------- 258
                L+    +F    ++    L     LR A    +  + V + GV+  G        
Sbjct: 114 EQRDRLYNDNQVFAKYNVS---RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170

Query: 259 --NVPLESSFRRVPRCVY--------TSTSLYE------------YRAWGSKPANPKHRH 296
             +  ++         ++        +  ++ E            + +     +N K R 
Sbjct: 171 CLSYKVQCKM---DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 297 FTW--GLRSL---ERH-----VVD----------FYISDFQSGLRALVKTGSGARVTPFV 336
            +    LR L   + +     V+           F   +     + L+ T    +VT F+
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF---NLSC--KILLTTRF-KQVTDFL 281

Query: 337 DDSVV--IDIKPENKDLSPE-----FIRWLGQKSLSSDDRLMRLKEGYIKEGS--TVSVM 387
             +    I +   +  L+P+      +++L  +       L R     +   +   +S++
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP----QDLPRE----VLTTNPRRLSII 333

Query: 388 GIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRC 428
               R+            +AT W   K +    L  II   
Sbjct: 334 AESIRDG-----------LAT-WDNWKHVNCDKLTTIIESS 362

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00