Citrus Sinensis ID: 013641

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------44
MAAGRHMLLMLAAAILFSFTSSGKSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSSFVEPSG
ccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccEEEEEEcccccEEEEEEEccccccccEEEccccccccccccccccccccccccccccEEEEccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccHHHHHcccccccccEEEEEEcccccccccccEEEcEEcEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEccccccccccccccccccEEEEEEEEccccccHHHHHHHHHHHHcccccccEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHccccccEEEEccccHHHHHHHccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccc
ccccHHHHHHHHHHHHHccccccccHcccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccEEEEEEccccEEEEEEEccccccccEEEEccccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccEEEEccHHHHHccccEEEccccccccccEEEEEcEEcEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEccccccccccEEEEccccEEEEEEEEEcccccHHHHHHHHHHHHHHHcccEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHccccEEEEcccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccc
MAAGRHMLLMLAAAILFSFtssgksheerepiTRFKQYLRfntahpnpnytapVSFLISQAQSIGlqfktlefvpnkpillltwpgsdpslpsilfnshldsvpaepdkwshppfsafhspetgqifargsqddKCIAIQYIEAIRNLIlvknfkpirtvhasyvpdeeiggfdgmakfvesnefrelnvgfvmdegqastnddfrvfyadrspwhliirakgapghgsrmfdngAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYlkagipsptgfvmnmqpseaeagfdarlpptvdpdlIRRRIAEEWAPAIRNMSYEIiekgpirdykgrplmtltddsnpwWSVFKRAVTsaggklgkpeilasTTDARYMRqlgipvlgfspmantpillhdhneflkdTVFLKGVEVYESVISSLSSFVEPSG
MAAGRHMLLMLAAAILFSFtssgksheeREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRakgapghgsRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEaeagfdarlpptvdPDLIRRRIAEewapairnmsyeiiekgpirdyKGRPLMTltddsnpwWSVFKRAvtsaggklgkpeILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVIsslssfvepsg
MAAGRHMLLMLAAAILFSFTSSGKSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSSFVEPSG
*****HMLLMLAAAILFSFT***********ITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFN***************************QIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPG****MFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVM*****************TVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISS*********
******M*LMLAAAI*****************TRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSSFV****
MAAGRHMLLMLAAAILFSFTS*********PITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISS*********
**AGRHMLLMLAAAILFSFTSSGKSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSSFV****
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iiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAAGRHMLLMLAAAILFSFTSSGKSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSSFVEPSG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query439 2.2.26 [Sep-21-2011]
Q99JW2408 Aminoacylase-1 OS=Mus mus yes no 0.890 0.958 0.434 2e-92
Q6PTT0408 Aminoacylase-1B OS=Rattus yes no 0.906 0.975 0.421 1e-91
P37111407 Aminoacylase-1 OS=Sus scr yes no 0.904 0.975 0.418 2e-91
Q5RFB0408 Aminoacylase-1 OS=Pongo a yes no 0.906 0.975 0.428 3e-91
Q03154408 Aminoacylase-1 OS=Homo sa yes no 0.906 0.975 0.424 1e-90
Q6AYS7408 Aminoacylase-1A OS=Rattus yes no 0.890 0.958 0.427 3e-90
Q55DP8408 Aminoacylase-1 OS=Dictyos yes no 0.899 0.968 0.415 8e-88
P27614576 Carboxypeptidase S OS=Sac yes no 0.394 0.300 0.347 2e-15
Q08BT9512 Probable carboxypeptidase no no 0.665 0.570 0.241 2e-14
Q55FR8519 Probable carboxypeptidase no no 0.257 0.217 0.393 2e-14
>sp|Q99JW2|ACY1_MOUSE Aminoacylase-1 OS=Mus musculus GN=Acy1 PE=1 SV=1 Back     alignment and function desciption
 Score =  339 bits (870), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 177/407 (43%), Positives = 246/407 (60%), Gaps = 16/407 (3%)

Query: 28  EREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGS 87
           E   +T F+QYLR  T  PNP+Y   ++FL  +A+ +GL  + +E VP   I +LTWPG+
Sbjct: 9   EHPSVTLFRQYLRICTVQPNPDYGGAITFLEERARQLGLSCQKIEVVPGFVITVLTWPGT 68

Query: 88  DPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRN 147
           +PSLPSIL NSH D VP   + W H PF AF   E G I+ARGSQD K ++IQY+EA+R 
Sbjct: 69  NPSLPSILLNSHTDVVPVFKEHWHHDPFEAFKDSE-GYIYARGSQDMKSVSIQYLEAVRR 127

Query: 148 LILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRV 207
           L    +  P RT+H ++VPDEE+GG  GM  FV+  EF+ L  GF +DEG A+  D F V
Sbjct: 128 LKSEGHRFP-RTIHMTFVPDEEVGGHKGMELFVKRPEFQALRAGFALDEGLANPTDAFTV 186

Query: 208 FYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAG-RAANS 266
           FY++RSPW + + + G PGH SR  ++ A E L K +  I  FRE +   ++A       
Sbjct: 187 FYSERSPWWVRVTSTGKPGHASRFIEDTAAEKLHKVISSILAFREKERQRLQANPHLKEG 246

Query: 267 EVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRN 326
            V SVNL  L+ G+        N+ P+   A FD R+ P VD     +++      A   
Sbjct: 247 AVTSVNLTKLEGGV------AYNVVPATMSASFDFRVAPDVDMKAFEKQLQRWCQEAGEG 300

Query: 327 MSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMR 386
           +++E  +K         P MT TDDS+PWW+ F  A  +    L +PEI  + TD+RY+R
Sbjct: 301 VTFEFAQKF------TEPRMTPTDDSDPWWAAFSGACKAMNLTL-EPEIFPAATDSRYIR 353

Query: 387 QLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSS 433
            +GIP LGFSPM  TP+LLHDHNE L + +FL+GV++Y  ++S+L+S
Sbjct: 354 AVGIPALGFSPMNRTPVLLHDHNERLHEDIFLRGVDIYTGLLSALAS 400
Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate).
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 1EC: 4
>sp|Q6PTT0|ACY1B_RAT Aminoacylase-1B OS=Rattus norvegicus GN=Acy1b PE=1 SV=1 Back     alignment and function description
>sp|P37111|ACY1_PIG Aminoacylase-1 OS=Sus scrofa GN=ACY1 PE=1 SV=2 Back     alignment and function description
>sp|Q5RFB0|ACY1_PONAB Aminoacylase-1 OS=Pongo abelii GN=ACY1 PE=2 SV=2 Back     alignment and function description
>sp|Q03154|ACY1_HUMAN Aminoacylase-1 OS=Homo sapiens GN=ACY1 PE=1 SV=1 Back     alignment and function description
>sp|Q6AYS7|ACY1A_RAT Aminoacylase-1A OS=Rattus norvegicus GN=Acy1a PE=1 SV=1 Back     alignment and function description
>sp|Q55DP8|ACY1_DICDI Aminoacylase-1 OS=Dictyostelium discoideum GN=acy1 PE=2 SV=1 Back     alignment and function description
>sp|P27614|CBPS_YEAST Carboxypeptidase S OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CPS1 PE=1 SV=2 Back     alignment and function description
>sp|Q08BT9|P20D1_XENTR Probable carboxypeptidase PM20D1 OS=Xenopus tropicalis GN=pm20d1 PE=2 SV=1 Back     alignment and function description
>sp|Q55FR8|CBPS2_DICDI Probable carboxypeptidase S-like 2 OS=Dictyostelium discoideum GN=DDB_G0267984 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query439
225459515450 PREDICTED: aminoacylase-1 isoform 1 [Vit 0.943 0.92 0.793 0.0
224063108442 predicted protein [Populus trichocarpa] 0.943 0.936 0.757 0.0
359492739445 PREDICTED: aminoacylase-1 isoform 3 [Vit 0.931 0.919 0.776 0.0
255545456436 Aminoacylase-1, putative [Ricinus commun 0.927 0.933 0.761 0.0
297846830439 hypothetical protein ARALYDRAFT_473822 [ 0.981 0.981 0.718 0.0
30693849438 aminoacylase [Arabidopsis thaliana] gi|8 0.979 0.981 0.705 0.0
110735714424 aminoacylase like protein [Arabidopsis t 0.947 0.981 0.723 0.0
449440692451 PREDICTED: aminoacylase-1-like [Cucumis 0.929 0.904 0.739 0.0
449518945451 PREDICTED: aminoacylase-1-like [Cucumis 0.929 0.904 0.739 0.0
15219359435 aminoacylase [Arabidopsis thaliana] gi|1 0.965 0.974 0.704 0.0
>gi|225459515|ref|XP_002285843.1| PREDICTED: aminoacylase-1 isoform 1 [Vitis vinifera] gi|359492737|ref|XP_003634461.1| PREDICTED: aminoacylase-1 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/416 (79%), Positives = 369/416 (88%), Gaps = 2/416 (0%)

Query: 24  KSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLT 83
           +  EE  PITRF+ YLR NT HPNP+Y + VSFL SQA  IGLQ KTLEF  +KP+LLLT
Sbjct: 37  EKEEEDSPITRFQGYLRINTVHPNPDYASAVSFLKSQALYIGLQTKTLEFARSKPLLLLT 96

Query: 84  WPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIE 143
           WPGSDPSLPSIL NSHLDSVP EP KW HPPFSA+ SP+ G+IFARGSQDDKCIA+QY+E
Sbjct: 97  WPGSDPSLPSILLNSHLDSVPVEPSKWLHPPFSAYRSPD-GKIFARGSQDDKCIAMQYLE 155

Query: 144 AIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTND 203
           AIRNL   +NF+P RT+H SYVPDEEIGGFDG AKFV S EF +LNVGF++DEGQAST D
Sbjct: 156 AIRNL-RAQNFQPTRTIHISYVPDEEIGGFDGAAKFVASKEFADLNVGFMLDEGQASTGD 214

Query: 204 DFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRA 263
           +FRVFYADRSPW+LII+A G PGHGSR++DN AMENLMKSVE+ITKFRES FDVVKAG+A
Sbjct: 215 EFRVFYADRSPWNLIIKAFGMPGHGSRLYDNSAMENLMKSVEIITKFRESLFDVVKAGKA 274

Query: 264 ANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA 323
           ANSEVISVN VYLKAGIPSPTGFVMNMQPSEAEAGFD R+PPT DPDL++ RIAEEWAPA
Sbjct: 275 ANSEVISVNPVYLKAGIPSPTGFVMNMQPSEAEAGFDLRMPPTADPDLVKIRIAEEWAPA 334

Query: 324 IRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDAR 383
           IRNM+Y+IIEKGPIRDY GRPLMTLT+DSNPWWS+FK+A+T AGGKL KPEILASTTDAR
Sbjct: 335 IRNMTYQIIEKGPIRDYMGRPLMTLTNDSNPWWSIFKQAITEAGGKLAKPEILASTTDAR 394

Query: 384 YMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSSFVEPSG 439
           YMRQ+GIP LGFSPM NTPILLHDHNEFLKDT++L+G++VYESVISSLSSFV  S 
Sbjct: 395 YMRQMGIPTLGFSPMTNTPILLHDHNEFLKDTIYLRGIKVYESVISSLSSFVRASA 450

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224063108|ref|XP_002300996.1| predicted protein [Populus trichocarpa] gi|222842722|gb|EEE80269.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359492739|ref|XP_003634462.1| PREDICTED: aminoacylase-1 isoform 3 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255545456|ref|XP_002513788.1| Aminoacylase-1, putative [Ricinus communis] gi|223546874|gb|EEF48371.1| Aminoacylase-1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297846830|ref|XP_002891296.1| hypothetical protein ARALYDRAFT_473822 [Arabidopsis lyrata subsp. lyrata] gi|297337138|gb|EFH67555.1| hypothetical protein ARALYDRAFT_473822 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30693849|ref|NP_175103.2| aminoacylase [Arabidopsis thaliana] gi|8655992|gb|AAF78265.1|AC020576_9 Contains similarity to aminoacylase from Sus scrofa domestica gi|S27010 and contains a peptidase M20 PF|01546 domain. ESTs gb|H76043, gb|AA394953, gb|AI995115, gb|AA651481 come from this gene [Arabidopsis thaliana] gi|109946615|gb|ABG48486.1| At1g44820 [Arabidopsis thaliana] gi|332193934|gb|AEE32055.1| aminoacylase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|110735714|dbj|BAE99837.1| aminoacylase like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449440692|ref|XP_004138118.1| PREDICTED: aminoacylase-1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449518945|ref|XP_004166496.1| PREDICTED: aminoacylase-1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15219359|ref|NP_175082.1| aminoacylase [Arabidopsis thaliana] gi|12320817|gb|AAG50548.1|AC074228_3 aminoacylase, putative [Arabidopsis thaliana] gi|13876508|gb|AAK43484.1|AC084807_9 hypothetical protein [Arabidopsis thaliana] gi|332193907|gb|AEE32028.1| aminoacylase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query439
TAIR|locus:2194884438 AT1G44820 [Arabidopsis thalian 0.979 0.981 0.705 1.5e-170
TAIR|locus:2205846435 AT1G44180 [Arabidopsis thalian 0.965 0.974 0.706 2.2e-167
TAIR|locus:2120958433 AQI "aquaporin interactor" [Ar 0.917 0.930 0.559 4e-129
MGI|MGI:87913408 Acy1 "aminoacylase 1" [Mus mus 0.897 0.965 0.435 1.6e-86
UNIPROTKB|B4DNW0498 ACY1 "cDNA FLJ60317, highly si 0.908 0.801 0.423 1.4e-85
UNIPROTKB|Q03154408 ACY1 "Aminoacylase-1" [Homo sa 0.904 0.973 0.425 1.8e-85
RGD|2030408 Acy1 "aminoacylase 1" [Rattus 0.904 0.973 0.423 2.4e-85
UNIPROTKB|P37111407 ACY1 "Aminoacylase-1" [Sus scr 0.899 0.970 0.421 3.8e-85
UNIPROTKB|F1MR63501 ACY1 "Uncharacterized protein" 0.920 0.806 0.417 1.7e-84
UNIPROTKB|Q6AYS7408 Acy1a "Aminoacylase-1A" [Rattu 0.897 0.965 0.428 7.2e-84
TAIR|locus:2194884 AT1G44820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1658 (588.7 bits), Expect = 1.5e-170, P = 1.5e-170
 Identities = 306/434 (70%), Positives = 369/434 (85%)

Query:     1 MAAGRHMLLMLAAAILFSFTSSGKSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQ 60
             MA    +  ++  +I+FS  SS  S EE  PITRF+QYLRFNTAHPNPNYTAP+SFLI+Q
Sbjct:     1 MAISPLLWTLIIFSIIFSLQSS--SSEEDTPITRFQQYLRFNTAHPNPNYTAPISFLINQ 58

Query:    61 AQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHS 120
             AQSIGL  KT+EF+  KPILL+TW GS+P+LPSILFNSHLDSVPAE +KW++PPFSA H 
Sbjct:    59 AQSIGLTTKTIEFISGKPILLITWLGSNPNLPSILFNSHLDSVPAESEKWTYPPFSA-HK 117

Query:   121 PETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFV 180
                G I+ARG+QDDKCI +QY+E+IRNL   + F P+RT+H SYVP+EEIGGFDGM KF 
Sbjct:   118 TIDGHIYARGAQDDKCIGVQYLESIRNL-KSRGFSPLRTIHISYVPEEEIGGFDGMMKFA 176

Query:   181 ESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENL 240
              S+EF++LN+GF MDEGQA+  D+FRVFYADR PWH +I+A+G PGHG++++DN AMENL
Sbjct:   177 ASSEFKDLNLGFAMDEGQANPGDEFRVFYADRVPWHFVIKAEGIPGHGAKLYDNSAMENL 236

Query:   241 MKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFD 300
             MKSVE+I++FRESQFD VKAG+AA SEVISVN VYLKAG P+ TGFVMNMQPSEAEAG+D
Sbjct:   237 MKSVELISRFRESQFDFVKAGKAAYSEVISVNPVYLKAGTPTTTGFVMNMQPSEAEAGYD 296

Query:   301 ARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFK 360
              RLPP  DPD++++RIAEEWAP+IRNM+Y I EKG +RD+ GRP+MT  +DSNPWWS+FK
Sbjct:   297 LRLPPMADPDVMKKRIAEEWAPSIRNMTYSIQEKGKLRDHLGRPIMTPVNDSNPWWSIFK 356

Query:   361 RAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKG 420
             +AV + GGKL KPEILASTTD+R++R LGIP  GFSPM NTPILLHDHNEFLKDTVF+KG
Sbjct:   357 QAVEAMGGKLAKPEILASTTDSRFIRTLGIPTFGFSPMTNTPILLHDHNEFLKDTVFMKG 416

Query:   421 VEVYESVISSLSSF 434
             +EVYESVIS+LSSF
Sbjct:   417 IEVYESVISALSSF 430
GO:0004046 "aminoacylase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=IEA
GO:0006520 "cellular amino acid metabolic process" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016787 "hydrolase activity" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2205846 AT1G44180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120958 AQI "aquaporin interactor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:87913 Acy1 "aminoacylase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|B4DNW0 ACY1 "cDNA FLJ60317, highly similar to Aminoacylase-1 (EC 3.5.1.14)" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q03154 ACY1 "Aminoacylase-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|2030 Acy1 "aminoacylase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P37111 ACY1 "Aminoacylase-1" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1MR63 ACY1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q6AYS7 Acy1a "Aminoacylase-1A" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q99JW2ACY1_MOUSE3, ., 5, ., 1, ., 1, 40.43480.89060.9583yesno
Q6PTT0ACY1B_RAT3, ., 5, ., 1, ., 1, 40.42160.90660.9754yesno
Q55DP8ACY1_DICDI3, ., 5, ., 1, ., 1, 40.41540.89970.9681yesno
Q5RFB0ACY1_PONAB3, ., 5, ., 1, ., 1, 40.42890.90660.9754yesno
P37111ACY1_PIG3, ., 5, ., 1, ., 1, 40.41880.90430.9754yesno
Q6AYS7ACY1A_RAT3, ., 5, ., 1, ., 1, 40.42750.89060.9583yesno
Q03154ACY1_HUMAN3, ., 5, ., 1, ., 1, 40.42400.90660.9754yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.1.140.914
3rd Layer3.5.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query439
cd05646391 cd05646, M20_AcylaseI_like, M20 Aminoacylase-I lik 0.0
TIGR01880400 TIGR01880, Ac-peptdase-euk, N-acyl-L-amino-acid am 0.0
pfam01546310 pfam01546, Peptidase_M20, Peptidase family M20/M25 3e-42
cd05675426 cd05675, M20_yscS_like, M20 Peptidase, carboxypept 2e-41
cd08659365 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylo 2e-37
COG0624409 COG0624, ArgE, Acetylornithine deacetylase/Succiny 2e-37
cd05674441 cd05674, M20_yscS, M20 Peptidase, carboxypeptidase 2e-34
PRK08651394 PRK08651, PRK08651, succinyl-diaminopimelate desuc 9e-29
PRK08262486 PRK08262, PRK08262, hypothetical protein; Provisio 1e-27
cd08011390 cd08011, M20_ArgE_DapE_like6, M20 Peptidases with 2e-24
cd03873237 cd03873, Zinc_peptidase_like, Zinc peptidases M18, 4e-22
TIGR01910375 TIGR01910, DapE-ArgE, acetylornithine deacetylase 2e-21
PRK07906426 PRK07906, PRK07906, hypothetical protein; Provisio 8e-18
PRK09133472 PRK09133, PRK09133, hypothetical protein; Provisio 1e-17
cd03895399 cd03895, M20_ArgE_DapE_like2, M20 Peptidases with 6e-15
cd08012423 cd08012, M20_ArgE-related, M20 Peptidases with sim 5e-10
cd05650393 cd05650, M20_ArgE_DapE_like1, M20 Peptidases with 1e-09
cd05680437 cd05680, M20_dipept_like_3, Uncharacterized M20 Di 1e-09
cd03894372 cd03894, M20_ArgE, M20 Peptidase acetylornithine d 4e-08
PRK06446436 PRK06446, PRK06446, hypothetical protein; Provisio 1e-07
PRK13013427 PRK13013, PRK13013, succinyl-diaminopimelate desuc 1e-07
TIGR01246370 TIGR01246, dapE_proteo, succinyl-diaminopimelate d 1e-07
cd03873237 cd03873, Zinc_peptidase_like, Zinc peptidases M18, 3e-07
cd05653341 cd05653, M20_ArgE_LysK, M20 Peptidase acetylornith 3e-07
cd05649376 cd05649, M20_ArgE_DapE_like4, M20 Peptidases with 8e-07
PRK08596421 PRK08596, PRK08596, acetylornithine deacetylase; V 1e-06
cd05676466 cd05676, M20_dipept_like_CNDP, M20 cytosolic nonsp 1e-06
PRK08554438 PRK08554, PRK08554, peptidase; Reviewed 2e-06
PRK07205444 PRK07205, PRK07205, hypothetical protein; Provisio 2e-06
TIGR01887447 TIGR01887, dipeptidaselike, dipeptidase, putative 3e-06
cd03885363 cd03885, M20_CPDG2, M20 Peptidase Glutamate carbox 3e-06
PRK06837427 PRK06837, PRK06837, acetylornithine deacetylase; P 4e-06
cd03893428 cd03893, M20_Dipept_like, M20 Dipeptidases 5e-06
cd03888453 cd03888, M20_PepV, M20 Peptidase Xaa-His dipeptida 7e-06
cd05681430 cd05681, M20_dipept_like_4, Uncharacterized M20 Di 7e-06
PRK08588377 PRK08588, PRK08588, succinyl-diaminopimelate desuc 9e-06
cd05652335 cd05652, M20_ArgE_DapE_like_fungal, M20 Peptidases 1e-05
TIGR01892364 TIGR01892, AcOrn-deacetyl, acetylornithine deacety 2e-05
PRK13983400 PRK13983, PRK13983, diaminopimelate aminotransfera 3e-05
cd03891366 cd03891, M20_DapE_proteobac, M20 Peptidase proteob 3e-05
PRK09104464 PRK09104, PRK09104, hypothetical protein; Validate 6e-05
PRK06915422 PRK06915, PRK06915, acetylornithine deacetylase; V 6e-05
PRK13009375 PRK13009, PRK13009, succinyl-diaminopimelate desuc 7e-05
cd05651342 cd05651, M20_ArgE_DapE_like5, M20 Peptidases with 1e-04
PRK08201456 PRK08201, PRK08201, hypothetical protein; Provisio 2e-04
PRK07318466 PRK07318, PRK07318, dipeptidase PepV; Reviewed 2e-04
PRK13004399 PRK13004, PRK13004, peptidase; Reviewed 5e-04
cd05678466 cd05678, M20_dipept_like_1, Uncharacterized M20 Di 7e-04
PRK06156520 PRK06156, PRK06156, hypothetical protein; Provisio 8e-04
cd03884399 cd03884, M20_bAS, M20 Peptidase beta-alanine synth 0.001
PRK09290413 PRK09290, PRK09290, allantoate amidohydrolase; Rev 0.001
cd08013377 cd08013, M20_ArgE_DapE_like3, M20 Peptidases with 0.002
cd05677434 cd05677, M20_dipept_like_DUG2_type, M20 Defective 0.003
pfam07687107 pfam07687, M20_dimer, Peptidase dimerisation domai 0.003
>gnl|CDD|193524 cd05646, M20_AcylaseI_like, M20 Aminoacylase-I like subfamily Back     alignment and domain information 
 Score =  625 bits (1615), Expect = 0.0
 Identities = 229/406 (56%), Positives = 283/406 (69%), Gaps = 16/406 (3%)

Query: 28  EREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGS 87
           E E +TRF++YLR  T HPNP+Y A V FL  QA+ +GL  K +E VP KPI++LTW GS
Sbjct: 1   EDEAVTRFREYLRIRTVHPNPDYDAAVEFLKRQAKELGLPVKVIEVVPGKPIVVLTWEGS 60

Query: 88  DPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRN 147
           DP LPSIL NSH D VP   +KW+H PFSA H  E G I+ARG+QD KC+ IQY+EAIR 
Sbjct: 61  DPELPSILLNSHTDVVPVFEEKWTHDPFSA-HKDEDGNIYARGAQDMKCVGIQYLEAIRR 119

Query: 148 LILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRV 207
           L     FKP RT+H S+VPDEEIGG DGM KFV++ EF++LNVGF +DEG AS  +++RV
Sbjct: 120 LK-ASGFKPKRTIHLSFVPDEEIGGHDGMEKFVKTEEFKKLNVGFALDEGLASPTEEYRV 178

Query: 208 FYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKA-GRAANS 266
           FY +RSPW ++I A G PGHGS++ DN A E LMK +E   +FRE QF  +K+ G+    
Sbjct: 179 FYGERSPWWVVITASGTPGHGSKLLDNTAGEKLMKVIEKFMEFREEQFQRLKSNGKLTIG 238

Query: 267 EVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRN 326
           +V SVNL  LK       G  MN+ PSEAEAGFD R+PPTVD +   +RI E  A A R 
Sbjct: 239 DVTSVNLTMLKG------GVQMNVVPSEAEAGFDIRIPPTVDLEEFEKRIKEWCAEAGRG 292

Query: 327 MSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMR 386
           ++YE  +KGP  D       T  DDSNPWW  FK+AV    GK  KPEI  + TD+RY+R
Sbjct: 293 VTYEFEQKGPEVD------PTPLDDSNPWWDAFKKAVKKM-GKKLKPEIFPAATDSRYIR 345

Query: 387 QLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLS 432
            LGIP LGFSPM NTPILLHDHNEFL + VFL+G+E+YE +I +L+
Sbjct: 346 ALGIPALGFSPMNNTPILLHDHNEFLNEDVFLRGIEIYEKIIPALA 391

Peptidase M20 family, Aminoacylase-I like (AcyI-like; Acylase I; N-acyl-L-amino-acid amidohydrolase; EC 3.5.1.14) subfamily. Acylase I is involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate) and is considered as a potential target of antimicrobial agents. Porcine AcyI is also shown to deacetylate certain quorum-sensing N-acylhomoserine lactones, while the rat enzyme has been implicated in degradation of chemotactic peptides of commensal bacteria. Prokaryotic arginine synthesis usually involves the transfer of an acetyl group to glutamate by ornithine acetyltransferase in order to form ornithine. However, Escherichia coli acetylornithine deacetylase (acetylornithinase, ArgE) (EC 3.5.1.16) catalyzes the deacylation of N2-acetyl-L-ornithine to yield ornithine and acetate. Phylogenetic evidence suggests that the clustering of the arg genes in one continuous sequence pattern arose in an ancestor common to Enterobacteriaceae and Vibrionaceae, where ornithine acetyltransferase was lost and replaced by a deacylase. Length = 391
>gnl|CDD|233615 TIGR01880, Ac-peptdase-euk, N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>gnl|CDD|216562 pfam01546, Peptidase_M20, Peptidase family M20/M25/M40 Back     alignment and domain information
>gnl|CDD|193550 cd05675, M20_yscS_like, M20 Peptidase, carboxypeptidase yscS-like Back     alignment and domain information
>gnl|CDD|193570 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like Back     alignment and domain information
>gnl|CDD|223697 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|193549 cd05674, M20_yscS, M20 Peptidase, carboxypeptidase yscS Back     alignment and domain information
>gnl|CDD|236323 PRK08651, PRK08651, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|236208 PRK08262, PRK08262, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|193559 cd08011, M20_ArgE_DapE_like6, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|193495 cd03873, Zinc_peptidase_like, Zinc peptidases M18, M20, M28, and M42 Back     alignment and domain information
>gnl|CDD|233632 TIGR01910, DapE-ArgE, acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>gnl|CDD|181163 PRK07906, PRK07906, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236388 PRK09133, PRK09133, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|193515 cd03895, M20_ArgE_DapE_like2, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|193560 cd08012, M20_ArgE-related, M20 Peptidases with simlarity to acetylornithine deacetylases Back     alignment and domain information
>gnl|CDD|193527 cd05650, M20_ArgE_DapE_like1, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|193555 cd05680, M20_dipept_like_3, Uncharacterized M20 Dipeptidases Back     alignment and domain information
>gnl|CDD|193514 cd03894, M20_ArgE, M20 Peptidase acetylornithine deacetylase Back     alignment and domain information
>gnl|CDD|235802 PRK06446, PRK06446, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|237268 PRK13013, PRK13013, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|162269 TIGR01246, dapE_proteo, succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>gnl|CDD|193495 cd03873, Zinc_peptidase_like, Zinc peptidases M18, M20, M28, and M42 Back     alignment and domain information
>gnl|CDD|193530 cd05653, M20_ArgE_LysK, M20 Peptidase acetylornithine deacetylase/acetyl-lysine deacetylase Back     alignment and domain information
>gnl|CDD|193526 cd05649, M20_ArgE_DapE_like4, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|181495 PRK08596, PRK08596, acetylornithine deacetylase; Validated Back     alignment and domain information
>gnl|CDD|193551 cd05676, M20_dipept_like_CNDP, M20 cytosolic nonspecific dipeptidases including anserinase and serum carnosinase Back     alignment and domain information
>gnl|CDD|236285 PRK08554, PRK08554, peptidase; Reviewed Back     alignment and domain information
>gnl|CDD|235965 PRK07205, PRK07205, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|233618 TIGR01887, dipeptidaselike, dipeptidase, putative Back     alignment and domain information
>gnl|CDD|193506 cd03885, M20_CPDG2, M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme Back     alignment and domain information
>gnl|CDD|180721 PRK06837, PRK06837, acetylornithine deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|193513 cd03893, M20_Dipept_like, M20 Dipeptidases Back     alignment and domain information
>gnl|CDD|193509 cd03888, M20_PepV, M20 Peptidase Xaa-His dipeptidase (PepV) degrades hydrophobic dipeptides Back     alignment and domain information
>gnl|CDD|193556 cd05681, M20_dipept_like_4, Uncharacterized M20 Dipeptidases Back     alignment and domain information
>gnl|CDD|181490 PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|193529 cd05652, M20_ArgE_DapE_like_fungal, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|130947 TIGR01892, AcOrn-deacetyl, acetylornithine deacetylase (ArgE) Back     alignment and domain information
>gnl|CDD|237578 PRK13983, PRK13983, diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|193511 cd03891, M20_DapE_proteobac, M20 Peptidase proteobacterial DapE encoded N-succinyl-L,L-diaminopimelic acid desuccinylase Back     alignment and domain information
>gnl|CDD|236379 PRK09104, PRK09104, hypothetical protein; Validated Back     alignment and domain information
>gnl|CDD|180745 PRK06915, PRK06915, acetylornithine deacetylase; Validated Back     alignment and domain information
>gnl|CDD|237265 PRK13009, PRK13009, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|193528 cd05651, M20_ArgE_DapE_like5, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|169276 PRK08201, PRK08201, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|235988 PRK07318, PRK07318, dipeptidase PepV; Reviewed Back     alignment and domain information
>gnl|CDD|183836 PRK13004, PRK13004, peptidase; Reviewed Back     alignment and domain information
>gnl|CDD|193553 cd05678, M20_dipept_like_1, Uncharacterized M20 Dipeptidases Back     alignment and domain information
>gnl|CDD|235720 PRK06156, PRK06156, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|193505 cd03884, M20_bAS, M20 Peptidase beta-alanine synthase, an amidohydrolase Back     alignment and domain information
>gnl|CDD|236456 PRK09290, PRK09290, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|193561 cd08013, M20_ArgE_DapE_like3, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|193552 cd05677, M20_dipept_like_DUG2_type, M20 Defective in Utilization of Glutathione-type peptidases containing WD repeats Back     alignment and domain information
>gnl|CDD|219515 pfam07687, M20_dimer, Peptidase dimerisation domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 439
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 100.0
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK06915422 acetylornithine deacetylase; Validated 100.0
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK06837427 acetylornithine deacetylase; Provisional 100.0
PRK08596421 acetylornithine deacetylase; Validated 100.0
KOG2275420 consensus Aminoacylase ACY1 and related metalloexo 100.0
PRK09133472 hypothetical protein; Provisional 100.0
PRK13983400 diaminopimelate aminotransferase; Provisional 100.0
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 100.0
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 100.0
PRK08201456 hypothetical protein; Provisional 100.0
PRK07906426 hypothetical protein; Provisional 100.0
PRK07522385 acetylornithine deacetylase; Provisional 100.0
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 100.0
PRK05111383 acetylornithine deacetylase; Provisional 100.0
PRK06446436 hypothetical protein; Provisional 100.0
PRK06133410 glutamate carboxypeptidase; Reviewed 100.0
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK13004399 peptidase; Reviewed 100.0
TIGR03320395 ygeY M20/DapE family protein YgeY. Members of this 100.0
PRK08262486 hypothetical protein; Provisional 100.0
TIGR03526395 selenium_YgeY putative selenium metabolism hydrola 100.0
PRK07338402 hypothetical protein; Provisional 100.0
PRK07473376 carboxypeptidase; Provisional 100.0
PRK09104464 hypothetical protein; Validated 100.0
PRK07907449 hypothetical protein; Provisional 100.0
PRK08737364 acetylornithine deacetylase; Provisional 100.0
PRK00466346 acetyl-lysine deacetylase; Validated 100.0
PRK07079469 hypothetical protein; Provisional 100.0
PRK08652347 acetylornithine deacetylase; Provisional 100.0
PRK04443348 acetyl-lysine deacetylase; Provisional 100.0
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 100.0
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 100.0
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
TIGR01900373 dapE-gram_pos succinyl-diaminopimelate desuccinyla 100.0
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 100.0
PRK07205444 hypothetical protein; Provisional 100.0
PRK13381404 peptidase T; Provisional 100.0
TIGR01883361 PepT-like peptidase T-like protein. This model rep 100.0
PRK06156520 hypothetical protein; Provisional 100.0
PRK07318466 dipeptidase PepV; Reviewed 100.0
PLN02280478 IAA-amino acid hydrolase 100.0
PLN02693437 IAA-amino acid hydrolase 100.0
PRK05469408 peptidase T; Provisional 100.0
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 100.0
PRK08554438 peptidase; Reviewed 100.0
TIGR01887447 dipeptidaselike dipeptidase, putative. This model 100.0
PRK15026485 aminoacyl-histidine dipeptidase; Provisional 100.0
TIGR01882410 peptidase-T peptidase T. This model represents a t 100.0
KOG2276473 consensus Metalloexopeptidases [Amino acid transpo 100.0
TIGR01891363 amidohydrolases amidohydrolase. This model represe 100.0
PRK12892412 allantoate amidohydrolase; Reviewed 100.0
PRK12893412 allantoate amidohydrolase; Reviewed 100.0
PRK09290413 allantoate amidohydrolase; Reviewed 100.0
PRK12891414 allantoate amidohydrolase; Reviewed 100.0
PRK12890414 allantoate amidohydrolase; Reviewed 100.0
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 100.0
COG1473392 AbgB Metal-dependent amidase/aminoacylase/carboxyp 100.0
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 100.0
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 100.0
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 100.0
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 99.95
COG2195414 PepD Di- and tripeptidases [Amino acid transport a 99.94
COG4187 553 RocB Arginine degradation protein (predicted deacy 99.83
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 99.8
TIGR03106343 trio_M42_hydro hydrolase, peptidase M42 family. Th 99.79
PRK09961344 exoaminopeptidase; Provisional 99.75
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 99.72
COG1363355 FrvX Cellulase M and related proteins [Carbohydrat 99.64
PRK09864356 putative peptidase; Provisional 99.62
PF07687111 M20_dimer: Peptidase dimerisation domain This fami 99.53
KOG2194 834 consensus Aminopeptidases of the M20 family [Postt 98.88
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 98.74
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 98.44
KOG3946338 consensus Glutaminyl cyclase [Posttranslational mo 97.83
COG2234435 Iap Predicted aminopeptidases [General function pr 97.45
KOG2195702 consensus Transferrin receptor and related protein 97.29
KOG2526555 consensus Predicted aminopeptidases - M20/M25/M40 97.13
PF05450234 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastri 95.82
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 94.58
COG4882486 Predicted aminopeptidase, Iap family [General func 92.4
PRK02256462 putative aminopeptidase 1; Provisional 92.39
PF00883311 Peptidase_M17: Cytosol aminopeptidase family, cata 91.01
PTZ00371465 aspartyl aminopeptidase; Provisional 89.94
PRK05015424 aminopeptidase B; Provisional 89.1
PRK02813428 putative aminopeptidase 2; Provisional 87.34
PRK02256462 putative aminopeptidase 1; Provisional 87.18
cd00433468 Peptidase_M17 Cytosol aminopeptidase family, N-ter 84.36
PRK02813428 putative aminopeptidase 2; Provisional 82.74
PTZ00412569 leucyl aminopeptidase; Provisional 80.02
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information 
Probab=100.00  E-value=5.2e-61  Score=481.01  Aligned_cols=391  Identities=57%  Similarity=1.009  Sum_probs=322.9

Q ss_pred             CchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccCC
Q 013641           27 EEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAE  106 (439)
Q Consensus        27 ~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~  106 (439)
                      ..++++++|++|++|||++++.++.++++||+++|+++|++++.++..++.+|+++.++|+++.+|+|+|++||||||++
T Consensus         7 ~~~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~   86 (400)
T TIGR01880         7 EEDIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVF   86 (400)
T ss_pred             chHHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCC
Confidence            46788999999999999985455789999999999999999887765446889999998755434899999999999998


Q ss_pred             CCCCCCCCCceeE-eCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcccc
Q 013641          107 PDKWSHPPFSAFH-SPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEF  185 (439)
Q Consensus       107 ~~~w~~~Pf~~~~-~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~  185 (439)
                      +..|+++||.+.+ +  ||+|||||++|||++++++|.|++.|+ +.+.+++++|.|+|+++||.|+..|++.+++++.+
T Consensus        87 ~~~W~~~Pf~~~~~~--dg~iyGrG~~D~K~~~aa~l~a~~~l~-~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~  163 (400)
T TIGR01880        87 REHWTHPPFSAFKDE--DGNIYARGAQDMKCVGVQYLEAVRNLK-ASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEF  163 (400)
T ss_pred             cccCccCCccceecC--CCeEEEcccccccHHHHHHHHHHHHHH-HcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhc
Confidence            7789999999987 6  999999999999999999999999999 88888899999999999999864599999987666


Q ss_pred             cccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCCcHHHHHHHHHHHHHccccchhHHHHhcc-cc
Q 013641          186 RELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGR-AA  264 (439)
Q Consensus       186 ~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~-~~  264 (439)
                      ...+.+++++.|..+|++...++++++|..+++|+++|+++|++.|...||+..|+.++..|.++....++...... ..
T Consensus       164 ~~~~~~~~~d~g~~~~~~~~~i~~~~kG~~~~~l~v~G~~~Hs~~~~~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~  243 (400)
T TIGR01880       164 KALNLGFALDEGLASPDDVYRVFYAERVPWWVVVTAPGNPGHGSKLMENTAMEKLEKSVESIRRFRESQFQLLQSNPDLA  243 (400)
T ss_pred             cCCceEEEEcCCCcccccccceeEEeeEEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHhcCcccc
Confidence            66678888887765666556899999999999999999999999865559999999999999876432222222110 11


Q ss_pred             CCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCCC
Q 013641          265 NSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRP  344 (439)
Q Consensus       265 ~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p  344 (439)
                      ....+|++++.++||.      ..|+||++|++.+|+|++|.++.+++.++|++.+++...++++++...      ...|
T Consensus       244 ~~~~~t~~v~~i~gG~------~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~~~~~~~~~~~~------~~~~  311 (400)
T TIGR01880       244 IGDVTSVNLTKLKGGV------QSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADAGEGVTYEFSQH------SGKP  311 (400)
T ss_pred             ccccceeecceeccCC------cCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhccCCceEEEEeec------CCCC
Confidence            1124799999999987      889999999999999999999999999999999875334455555431      2233


Q ss_pred             ccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHH
Q 013641          345 LMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVY  424 (439)
Q Consensus       345 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~  424 (439)
                      +..+.+.++++++.+.+++++.+... .+....++||++++...|+|++.|||+......+|++||+++++++.+++++|
T Consensus       312 ~~~~~~~~~~lv~~l~~a~~~~~~~~-~~~~~~g~tDa~~~~~~gip~v~fgp~~~~~~~aH~~dE~i~i~~l~~~~~~~  390 (400)
T TIGR01880       312 LVTPHDDSNPWWVAFKDAVKEMGCTF-KPEILPGSTDSRYIRAAGVPALGFSPMNNTPVLLHDHNEFLNEAVFLRGIEIY  390 (400)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHcCCee-cceeecCcchHHHHHhCCCCeEEECCccCCcccccCCCCceEHHHHHHHHHHH
Confidence            33345567899999999999975432 45567799999999999999999999864334699999999999999999999


Q ss_pred             HHHHHHhhc
Q 013641          425 ESVISSLSS  433 (439)
Q Consensus       425 ~~~l~~~~~  433 (439)
                      .+++..+..
T Consensus       391 ~~~l~~~~~  399 (400)
T TIGR01880       391 QTLISALAS  399 (400)
T ss_pred             HHHHHHhhc
Confidence            999998863

This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>PLN02280 IAA-amino acid hydrolase Back     alignment and domain information
>PLN02693 IAA-amino acid hydrolase Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01891 amidohydrolases amidohydrolase Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 [] Back     alignment and domain information
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only] Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2234 Iap Predicted aminopeptidases [General function prediction only] Back     alignment and domain information
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] Back     alignment and domain information
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism] Back     alignment and domain information
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only] Back     alignment and domain information
>PRK02256 putative aminopeptidase 1; Provisional Back     alignment and domain information
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PTZ00371 aspartyl aminopeptidase; Provisional Back     alignment and domain information
>PRK05015 aminopeptidase B; Provisional Back     alignment and domain information
>PRK02813 putative aminopeptidase 2; Provisional Back     alignment and domain information
>PRK02256 putative aminopeptidase 1; Provisional Back     alignment and domain information
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains Back     alignment and domain information
>PRK02813 putative aminopeptidase 2; Provisional Back     alignment and domain information
>PTZ00412 leucyl aminopeptidase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query439
1q7l_A198 Zn-binding Domain Of The T347g Mutant Of Human Amin 4e-50
1q7l_B88 Zn-binding Domain Of The T347g Mutant Of Human Amin 9e-19
3ic1_A377 Crystal Structure Of Zinc-Bound Succinyl-Diaminopim 3e-11
4h2k_A269 Crystal Structure Of The Catalytic Domain Of Succin 1e-05
2pok_A481 Crystal Structure Of A M20 Family Metallo Peptidase 5e-05
2zof_A479 Crystal Structure Of Mouse Carnosinase Cn2 Complexe 6e-04
>pdb|1Q7L|A Chain A, Zn-binding Domain Of The T347g Mutant Of Human Aminoacylase- I Length = 198 Back     alignment and structure 
Iteration: 1

 Score =  195 bits (496), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 96/196 (48%), Positives = 127/196 (64%), Gaps = 3/196 (1%)
Query: 20  TSSGKSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPI 79
           TS G   EE   +T F+QYLR  T  P P+Y A V+F    A+ +GL  + +E  P   +
Sbjct: 2   TSKGPE-EEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVV 60
Query: 80  LLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAI 139
            +LTWPG++P+L SIL NSH D VP   + WSH PF AF   E G I+ARG+QD KC++I
Sbjct: 61  TVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSE-GYIYARGAQDMKCVSI 119
Query: 140 QYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQA 199
           QY+EA+R L  V+  +  RT+H ++VPDEE+GG  GM  FV+  EF  L  GF +DEG A
Sbjct: 120 QYLEAVRRL-KVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIA 178
Query: 200 STNDDFRVFYADRSPW 215
           +  D F VFY++RSPW
Sbjct: 179 NPTDAFTVFYSERSPW 194
>pdb|1Q7L|B Chain B, Zn-binding Domain Of The T347g Mutant Of Human Aminoacylase- I Length = 88 Back     alignment and structure
>pdb|3IC1|A Chain A, Crystal Structure Of Zinc-Bound Succinyl-Diaminopimelate Desuccinylase From Haemophilus Influenzae Length = 377 Back     alignment and structure
>pdb|4H2K|A Chain A, Crystal Structure Of The Catalytic Domain Of Succinyl-Diaminopimelate Desuccinylase From Haemophilus Influenzae Length = 269 Back     alignment and structure
>pdb|2POK|A Chain A, Crystal Structure Of A M20 Family Metallo Peptidase From Streptococcus Pneumoniae Length = 481 Back     alignment and structure
>pdb|2ZOF|A Chain A, Crystal Structure Of Mouse Carnosinase Cn2 Complexed With Mn Bestatin Length = 479 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query439
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 1e-74
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 2e-34
1q7l_B88 Aminoacylase-1; catalysis, enzyme dimerization, si 4e-32
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 9e-29
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 4e-28
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 3e-22
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 3e-07
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 9e-22
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 2e-19
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 1e-17
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 4e-14
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 8e-07
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 4e-14
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 5e-05
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 2e-13
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 5e-13
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 4e-11
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 2e-10
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 7e-06
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 3e-10
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 1e-09
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 1e-09
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 3e-07
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 4e-05
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Length = 198 Back     alignment and structure
 Score =  231 bits (590), Expect = 1e-74
 Identities = 95/200 (47%), Positives = 128/200 (64%), Gaps = 3/200 (1%)

Query: 20  TSSGKSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPI 79
           TS G   E    +T F+QYLR  T  P P+Y A V+F    A+ +GL  + +E  P   +
Sbjct: 2   TSKGPEEEH-PSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVV 60

Query: 80  LLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAI 139
            +LTWPG++P+L SIL NSH D VP   + WSH PF AF   E G I+ARG+QD KC++I
Sbjct: 61  TVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSE-GYIYARGAQDMKCVSI 119

Query: 140 QYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQA 199
           QY+EA+R L  V+  +  RT+H ++VPDEE+GG  GM  FV+  EF  L  GF +DEG A
Sbjct: 120 QYLEAVRRL-KVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIA 178

Query: 200 STNDDFRVFYADRSPWHLII 219
           +  D F VFY++RSPW + +
Sbjct: 179 NPTDAFTVFYSERSPWWVRV 198
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Length = 393 Back     alignment and structure
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Length = 88 Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Length = 433 Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Length = 364 Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Length = 470 Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Length = 470 Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Length = 369 Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Length = 356 Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Length = 369 Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Length = 492 Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Length = 492 Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Length = 481 Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Length = 481 Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Length = 393 Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Length = 377 Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Length = 485 Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Length = 472 Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Length = 472 Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Length = 479 Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Length = 396 Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Length = 373 Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Length = 268 Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Length = 417 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Length = 434 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query439
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 100.0
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 100.0
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 100.0
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 100.0
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 100.0
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 100.0
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 100.0
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 100.0
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 100.0
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 100.0
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 100.0
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 100.0
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 100.0
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 100.0
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 100.0
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 100.0
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 100.0
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 100.0
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 100.0
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 100.0
2qyv_A487 XAA-His dipeptidase; YP_718209.1, structural genom 100.0
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 100.0
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 100.0
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 100.0
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 100.0
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 100.0
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 100.0
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 100.0
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 100.0
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 100.0
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 99.95
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 99.93
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 99.93
2wzn_A354 TET3, 354AA long hypothetical operon protein FRV; 99.92
2gre_A349 Deblocking aminopeptidase; structural genomi prote 99.91
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 99.9
1vho_A346 Endoglucanase; structural genomics, unknown functi 99.88
3cpx_A321 Aminopeptidase, M42 family; YP_676701.1, putative 99.87
1ylo_A348 Hypothetical protein SF2450; structural genomics, 99.86
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 99.81
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 99.81
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 99.77
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 99.76
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 99.75
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 99.7
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 99.65
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 99.56
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 99.55
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 99.52
4f9u_A312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 99.49
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 99.48
1q7l_B88 Aminoacylase-1; catalysis, enzyme dimerization, si 99.44
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 99.15
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 99.12
3fed_A707 Glutamate carboxypeptidase III; metallopeptidase, 98.7
3kas_A640 Transferrin receptor protein 1; transferrin recept 98.68
3k9t_A435 Putative peptidase; structural genomics, joint cen 96.49
3vat_A496 Dnpep, aspartyl aminopeptidase; alpha-beta-alpha s 94.49
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 94.31
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 94.14
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 94.0
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 92.52
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 91.94
2glj_A461 Probable M18-family aminopeptidase 1; aminopeptida 91.08
3fed_A 707 Glutamate carboxypeptidase III; metallopeptidase, 89.62
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 88.84
2glj_A461 Probable M18-family aminopeptidase 1; aminopeptida 88.81
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 88.33
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 86.59
3h8g_F497 Cytosol aminopeptidase; hydrolase, manganese, meta 84.59
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 84.37
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 83.41
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 83.11
3pei_A486 Cytosol aminopeptidase; structural genomics, cente 82.49
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 82.18
4efd_A522 Aminopeptidase; structural genomics, structural ge 81.12
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
Probab=100.00  E-value=7.2e-56  Score=447.43  Aligned_cols=377  Identities=18%  Similarity=0.205  Sum_probs=311.2

Q ss_pred             CCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEe------------------cCCccEEEEEEcCC
Q 013641           26 HEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEF------------------VPNKPILLLTWPGS   87 (439)
Q Consensus        26 ~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~------------------~~~~~nvi~~~~g~   87 (439)
                      .+.+++++++++|++|||+|  ++|.++++||+++|+++|++++.+..                  .++.+||+++++|.
T Consensus        23 ~~~~~~~~~l~~l~~~ps~s--~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~~~g~  100 (433)
T 3pfo_A           23 RNFNDQVAFLQRMVQFRSVR--GEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSD  100 (433)
T ss_dssp             HHHHHHHHHHHHHHTSCCBT--TCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEEEEEEECCC
T ss_pred             hhHHHHHHHHHHHhcCCCCC--CCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcEEEEEEecC
Confidence            45688999999999999997  78999999999999999999887642                  23578999999874


Q ss_pred             CCCCCcEEEeeecccccCCC-CCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEec
Q 013641           88 DPSLPSILFNSHLDSVPAEP-DKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVP  166 (439)
Q Consensus        88 ~~~~~~vll~aH~Dtvp~~~-~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~  166 (439)
                      . ++|+|+|+|||||||.++ +.|+.+||++.++  ||++||||++|||++++++|.|++.|+ +.+.+++++|.|+|++
T Consensus       101 ~-~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~--~g~~~g~G~~D~k~~~a~~l~a~~~l~-~~~~~~~~~v~~~~~~  176 (433)
T 3pfo_A          101 G-KGRSLILQGHIDVVPEGPVDLWSDPPYEAKVR--DGWMIGRGAQDMKGGVSAMIFALDAIR-TAGYAPDARVHVQTVT  176 (433)
T ss_dssp             C-CSCCEEEEEECCBCCCCCGGGCSSCTTTCCEE--TTEEECTTTTTTHHHHHHHHHHHHHHH-HTTEEESSCEEEEEES
T ss_pred             C-CCCEEEEEcccCCcCCCCcccCCCCCCCcEEE--CCEEEecchhhhhHHHHHHHHHHHHHH-HcCCCCCccEEEEEEe
Confidence            4 468999999999999986 6899999999998  999999999999999999999999999 8877788999999999


Q ss_pred             CcccCcccCHHHHHhcccccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCC-cHHHHHHHHHH
Q 013641          167 DEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDN-GAMENLMKSVE  245 (439)
Q Consensus       167 ~EE~g~~~G~~~~~~~~~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~g-nai~~~~~~i~  245 (439)
                      +||.|+ .|++.+++++.  ++|++++.     +|+. ..++++.+|..+++|+++|+++|++.|+.+ ||+..+++++.
T Consensus       177 ~EE~g~-~G~~~~~~~~~--~~d~~i~~-----ep~~-~~i~~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~i~  247 (433)
T 3pfo_A          177 EEESTG-NGALSTLMRGY--RADACLIP-----EPTG-HTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILSAMHLIR  247 (433)
T ss_dssp             CTTTTC-HHHHHHHHTTC--CCSEEEEC-----CCCS-SCEEEEECEEEEEEEEEECCCCBGGGGGGSCCHHHHHHHHHH
T ss_pred             cCccCC-hhHHHHHhcCC--CCCEEEEe-----CCCC-CceEEecceEEEEEEEEEcCCCccCCCCcCcCHHHHHHHHHH
Confidence            999987 79999987653  36766665     4653 578999999999999999999999999888 99999999999


Q ss_pred             HHHccccchhHHH--HhccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhccc
Q 013641          246 MITKFRESQFDVV--KAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA  323 (439)
Q Consensus       246 ~l~~~~~~~~~~~--~~~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~  323 (439)
                      .|+.+........  .+.........+++++.++||.      +.|+||++|++.+++|++|.++.+++.++|++.+++.
T Consensus       248 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~------~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~~  321 (433)
T 3pfo_A          248 AFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGD------WASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLADA  321 (433)
T ss_dssp             HHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECS------CTTBCCCEEEEEEEEEECTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhccccCccccccCCCceEEeeeEECCC------CCcccCcEEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence            9987643211100  0000001123589999999997      8999999999999999999999999999999888752


Q ss_pred             C--------CCceEEEeeccccccCCCCCccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHH-hCCCEEE
Q 013641          324 I--------RNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQ-LGIPVLG  394 (439)
Q Consensus       324 ~--------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~-~gip~v~  394 (439)
                      .        ..+++++..       ...|+. .++.|+++++.+.+++++..+..+.+....+++|+++|.+ .|+|++.
T Consensus       322 ~~~~~~~~~~~~~v~~~~-------~~~p~~-~~~~d~~~~~~~~~a~~~~~G~~~~~~~~~g~~D~~~~~~~~giP~v~  393 (433)
T 3pfo_A          322 QATDSFLSENPAELVWSG-------FQADPA-VCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSVDYGIPALC  393 (433)
T ss_dssp             HTTCHHHHHSCCEEEEEE-------EEECCE-ECCTTCHHHHHHHHHHHHHHSSCCCEEEESSCCTHHHHHHTTCCCEEE
T ss_pred             hhhCcccccCCeEEEEec-------ccCCcc-cCCCCCHHHHHHHHHHHHHhCCCCceeeeeeeccHHHHHhhCCCCEEE
Confidence            1        124555432       122333 2456789999999999987665434556778999999987 5999999


Q ss_pred             EccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhhcc
Q 013641          395 FSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSSF  434 (439)
Q Consensus       395 ~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~~~  434 (439)
                      |||+..   .+|++||+++++++.+++++|+.++.++++.
T Consensus       394 ~Gp~~~---~~H~~~E~i~~~~l~~~~~~~~~~i~~~~~~  430 (433)
T 3pfo_A          394 YGPYGQ---GPHAFDERIDLESLRKTTLSIALFVAEWCGL  430 (433)
T ss_dssp             CCCCEE---CTTSTTCEEEHHHHHHHHHHHHHHHHHHHCE
T ss_pred             ECCCCc---cCCCCCceEEHHHHHHHHHHHHHHHHHHhcc
Confidence            999843   7999999999999999999999999999875
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum} Back     alignment and structure
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A* Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp} Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 439
g1q7l.1280 c.56.5.4 (A:,B:) Aminoacylase-1, catalytic domain 5e-42
g1q7l.1280 c.56.5.4 (A:,B:) Aminoacylase-1, catalytic domain 4e-23
d1lfwa1272 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV { 7e-12
d1fnoa4295 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripepti 4e-10
d1cg2a1276 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, 5e-08
d1lfwa2196 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactoba 2e-06
d1rtqa_291 c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolyti 3e-04
d1z2la1293 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydro 0.001
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Length = 272 Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Length = 295 Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Length = 276 Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Length = 196 Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Length = 291 Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Length = 293 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query439
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 100.0
d1vgya1262 Succinyl-diaminopimelate desuccinylase, catalytic 100.0
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 99.96
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.94
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 99.93
d1ysja1261 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 99.91
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 99.89
d1xmba1273 IAA-amino acid hydrolase, catalytic domain {Mouse- 99.89
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.86
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 99.85
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.84
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 99.83
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 99.82
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 99.78
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 99.72
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 99.64
d1vgya2113 Succinyl-diaminopimelate desuccinylase {Neisseria 99.63
d1ysja2115 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 99.62
d1cg2a2113 Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 99.59
d1xmba2119 IAA-amino acid hydrolase {Mouse-ear cress (Arabido 99.58
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 99.44
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 99.35
d1z2la2117 Allantoate amidohydrolase AllC {Escherichia coli [ 99.35
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 99.28
d1r3na2116 Peptidase-like beta-alanine synthase {Yeast (Sacch 99.25
d1lfwa2196 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.23
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 98.46
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 97.78
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 97.69
d1fnoa3113 Peptidase T (tripeptidase) {Salmonella typhimurium 96.49
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 84.38
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure