Citrus Sinensis ID: 013676
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 438 | ||||||
| 356497669 | 432 | PREDICTED: uncharacterized protein At4g3 | 0.863 | 0.875 | 0.725 | 1e-163 | |
| 359495804 | 431 | PREDICTED: uncharacterized protein At4g3 | 0.961 | 0.976 | 0.688 | 1e-161 | |
| 297798078 | 643 | hypothetical protein ARALYDRAFT_327981 [ | 0.926 | 0.631 | 0.681 | 1e-158 | |
| 388520063 | 436 | unknown [Lotus japonicus] | 0.863 | 0.866 | 0.711 | 1e-157 | |
| 79499023 | 427 | uncharacterized protein [Arabidopsis tha | 0.831 | 0.852 | 0.730 | 1e-157 | |
| 357485321 | 422 | hypothetical protein MTR_5g030900 [Medic | 0.796 | 0.827 | 0.747 | 1e-157 | |
| 4467098 | 673 | putative protein [Arabidopsis thaliana] | 0.817 | 0.531 | 0.739 | 1e-156 | |
| 27754707 | 445 | unknown protein [Arabidopsis thaliana] | 0.831 | 0.817 | 0.727 | 1e-156 | |
| 449457285 | 435 | PREDICTED: uncharacterized protein At4g3 | 0.936 | 0.942 | 0.665 | 1e-153 | |
| 255572565 | 293 | conserved hypothetical protein [Ricinus | 0.662 | 0.989 | 0.769 | 1e-128 |
| >gi|356497669|ref|XP_003517682.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 277/382 (72%), Positives = 324/382 (84%), Gaps = 4/382 (1%)
Query: 57 SHSFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKP 116
+ +FK + L + S Q TA AE + E E+A+GYT+TQFCDK+ID FLNEK
Sbjct: 55 AQNFKPHILLCTSLPSPQASSASTAQAE----EHEVEIAKGYTMTQFCDKMIDFFLNEKT 110
Query: 117 RVKQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHY 176
+ K+WRKYL+FRE+W KYR+ FYNRC+ RAD E++P MKEK ISL RK+KKIDDEME HY
Sbjct: 111 KSKEWRKYLIFREEWKKYRDRFYNRCQRRADMENDPVMKEKFISLRRKLKKIDDEMEGHY 170
Query: 177 ELLKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVS 236
ELL EIQDSP DINA+VARRRKDFTGEFF YLSL+S+T+DSLED D ++RL +RCLSAVS
Sbjct: 171 ELLMEIQDSPMDINAIVARRRKDFTGEFFHYLSLISDTYDSLEDRDGISRLGSRCLSAVS 230
Query: 237 AYDKTLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAK 296
AYD TLE++ETLD+AQAKFDDILNSPS+D+AC+KIKSLAKAKELDSSLILLI+ AWA AK
Sbjct: 231 AYDNTLENIETLDAAQAKFDDILNSPSIDIACQKIKSLAKAKELDSSLILLISSAWAKAK 290
Query: 297 ASQTMKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSE 356
S TMKNEVKDIMY LY+ATKSSLR I PKEIKLLK+LLNIIDPEERFSALATAF+PG E
Sbjct: 291 ESTTMKNEVKDIMYQLYRATKSSLRSITPKEIKLLKHLLNIIDPEERFSALATAFTPGDE 350
Query: 357 HESKNPKALYTTPKELHKWITIMLDAYHLNKEETDMREAKQMTQPVVIQRLLILKETIEE 416
HE+K+P ALYTTPKELHKWI IMLDAYHLNKEETD+REA+QMT PVVIQRL ILK+TIE+
Sbjct: 351 HEAKDPNALYTTPKELHKWIKIMLDAYHLNKEETDLREARQMTDPVVIQRLFILKDTIEQ 410
Query: 417 EYLGQATFQTMQTKEDTESMEL 438
EY+ + T Q +TK+D++S E
Sbjct: 411 EYMEKDTTQKSETKDDSKSEEF 432
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495804|ref|XP_003635095.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like [Vitis vinifera] gi|297736678|emb|CBI25695.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297798078|ref|XP_002866923.1| hypothetical protein ARALYDRAFT_327981 [Arabidopsis lyrata subsp. lyrata] gi|297312759|gb|EFH43182.1| hypothetical protein ARALYDRAFT_327981 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|388520063|gb|AFK48093.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|79499023|ref|NP_195505.2| uncharacterized protein [Arabidopsis thaliana] gi|209574320|sp|Q84WN0.2|Y4920_ARATH RecName: Full=Uncharacterized protein At4g37920, chloroplastic; Flags: Precursor gi|332661453|gb|AEE86853.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|357485321|ref|XP_003612948.1| hypothetical protein MTR_5g030900 [Medicago truncatula] gi|163889367|gb|ABY48137.1| putative protein [Medicago truncatula] gi|355514283|gb|AES95906.1| hypothetical protein MTR_5g030900 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|4467098|emb|CAB37532.1| putative protein [Arabidopsis thaliana] gi|7270775|emb|CAB80457.1| putative protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|27754707|gb|AAO22797.1| unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449457285|ref|XP_004146379.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like [Cucumis sativus] gi|449523604|ref|XP_004168813.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255572565|ref|XP_002527216.1| conserved hypothetical protein [Ricinus communis] gi|223533392|gb|EEF35142.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 438 | ||||||
| TAIR|locus:2121036 | 427 | AT4G37920 "AT4G37920" [Arabido | 0.942 | 0.967 | 0.669 | 1.1e-142 | |
| TAIR|locus:2035957 | 414 | AT1G36320 "AT1G36320" [Arabido | 0.767 | 0.811 | 0.440 | 3e-78 | |
| DICTYBASE|DDB_G0286355 | 2116 | mhcA "myosin heavy chain" [Dic | 0.867 | 0.179 | 0.211 | 7.3e-06 | |
| MGI|MGI:1339712 | 1937 | Myh8 "myosin, heavy polypeptid | 0.643 | 0.145 | 0.241 | 0.00098 |
| TAIR|locus:2121036 AT4G37920 "AT4G37920" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1395 (496.1 bits), Expect = 1.1e-142, P = 1.1e-142
Identities = 285/426 (66%), Positives = 339/426 (79%)
Query: 13 MSNLLSFELAISTPKSALE---KSSLTSVKTPLISISSTKQLKITEASH-SFKTNTLSSS 68
M+NLL + S+ L K+S T P + + + KI ++S +F T+T++ +
Sbjct: 1 MANLLETSIFFSSADKLLSFPPKNSQTH-HLPFSAFINGGR-KIRKSSTITFATDTVTYN 58
Query: 69 HRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFR 128
TS +V V ED E EVAEGYT+ QFCDKIID+FLNEKP+VKQW+ YLV R
Sbjct: 59 GTTSAEVKSSV-------EDPMEVEVAEGYTMAQFCDKIIDLFLNEKPKVKQWKTYLVLR 111
Query: 129 EDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTD 188
++WNKY +FY RCR RAD E++P +K+KL+SL KVKKID EME H +LLKEIQ++PTD
Sbjct: 112 DEWNKYSVNFYKRCRIRADTETDPILKQKLVSLESKVKKIDKEMEKHNDLLKEIQENPTD 171
Query: 189 INAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETL 248
INA+ A+RR+DFTGEFFRY++L+SET D LED DAVARLATRCLSAVSAYD TLE VETL
Sbjct: 172 INAIAAKRRRDFTGEFFRYVTLLSETLDGLEDRDAVARLATRCLSAVSAYDNTLESVETL 231
Query: 249 DSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDI 308
D+AQAKF+DILNSPSVD ACEKI+SLAKAKELDSSLILLIN A+A+AK SQT+ NE KDI
Sbjct: 232 DTAQAKFEDILNSPSVDSACEKIRSLAKAKELDSSLILLINSAYAAAKESQTVTNEAKDI 291
Query: 309 MYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPKALYTT 368
MY LYKATKSSLR I PKEIKLLKYLLNI DPEERFSALATAFSPG +HE+K+PKALYTT
Sbjct: 292 MYHLYKATKSSLRSITPKEIKLLKYLLNITDPEERFSALATAFSPGDDHEAKDPKALYTT 351
Query: 369 PKELHKWITIMLDAYHLNKEETDMREAKQMTQPVVIQRLLILKETIEEEYLGQATFQTMQ 428
PKELHKWI IMLDAYHLNKEETD++EAKQM+QP+VIQRL ILK+TIE+EYL + T +
Sbjct: 352 PKELHKWIKIMLDAYHLNKEETDIKEAKQMSQPIVIQRLFILKDTIEDEYLDKKTIVADE 411
Query: 429 TKEDTE 434
T + E
Sbjct: 412 TPKKEE 417
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| TAIR|locus:2035957 AT1G36320 "AT1G36320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0286355 mhcA "myosin heavy chain" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| MGI|MGI:1339712 Myh8 "myosin, heavy polypeptide 8, skeletal muscle, perinatal" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 438 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 51.8 bits (123), Expect = 4e-07
Identities = 70/451 (15%), Positives = 143/451 (31%), Gaps = 115/451 (25%)
Query: 5 LLPIRSRTMSNLLSFELAISTPKSALEK---SSL--------TSVKTPLISISSTKQLKI 53
++ + L F +S + ++K L + +KT S ++ I
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113
Query: 54 TEASHSFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVA----EGYTLTQFCDK--- 106
+ + N + + + SR + + E + K V G K
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQP-YLKLRQALLELRPAKNVLIDGVLG------SGKTWV 166
Query: 107 IIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVK 166
+DV L+ K V+ + +F W + C + E+ M +KL+
Sbjct: 167 ALDVCLSYK--VQCKMDFKIF---WLNLK-----NCNS---PETVLEMLQKLLY------ 207
Query: 167 KIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFR--YLSLVSETHDSLEDCDAV 224
+ID S + I I+++ A R+ + + L L ++++ A
Sbjct: 208 QIDPNWTSRSDHSSNI---KLRIHSIQAELRRLLKSKPYENCLLVL-----LNVQNAKAW 259
Query: 225 ARLATRC--------------LSAVSAYDKTLEHV-ETLDSAQAK--FDDILNSPSVDVA 267
C LSA + +L+H TL + K L+
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD------- 312
Query: 268 CEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMY-CLYKATKSSLRGIAPK 326
+ + L + E+ ++ ++ S + + K + L +SSL + P
Sbjct: 313 -CRPQDLPR--EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369
Query: 327 EIKLLKYLLNIID-----PEERFSAL------------ATAFSPGSEHESKNPKALYTTP 369
E + + L++ P S + S E + ++ + P
Sbjct: 370 EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP 429
Query: 370 -------------KELHKWITIMLDAYHLNK 387
LH+ ++D Y++ K
Sbjct: 430 SIYLELKVKLENEYALHR---SIVDHYNIPK 457
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00